Metagenome / Metatranscriptome Family F091452

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091452
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	86 residues
Representative Sequence	VASRAWLSDQQKRRATRIAREKGLTCPDCGGSPEPAPEDEVRAHPGGGADITMRCLNCESASEFALVLSPEEAKALGLHALRDRPEAP
Number of Associated Samples	55
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.04 %
% of genes near scaffold ends (potentially truncated)	19.63 %
% of genes from short scaffolds (< 2000 bps)	83.18 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.467 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (40.187 % of family members)
Environment Ontology (ENVO)	Unclassified (40.187 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.159 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.69% β-sheet: 23.28% Coil/Unstructured: 56.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00069	Pkinase	14.02
PF07883	Cupin_2	2.80
PF12697	Abhydrolase_6	2.80
PF09844	DUF2071	1.87
PF05974	DUF892	1.87
PF00561	Abhydrolase_1	0.93
PF03793	PASTA	0.93
PF00089	Trypsin	0.93
PF11387	DUF2795	0.93
PF00291	PALP	0.93
PF08240	ADH_N	0.93
PF00881	Nitroreductase	0.93
PF02230	Abhydrolase_2	0.93
PF13649	Methyltransf_25	0.93
PF07676	PD40	0.93
PF14023	DUF4239	0.93
PF11160	Hva1_TUDOR	0.93
PF03176	MMPL	0.93
PF06724	DUF1206	0.93
PF13302	Acetyltransf_3	0.93
PF00903	Glyoxalase	0.93
PF01710	HTH_Tnp_IS630	0.93
PF12695	Abhydrolase_5	0.93
PF06224	HTH_42	0.93
PF13561	adh_short_C2	0.93
PF00106	adh_short	0.93
PF00072	Response_reg	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	56.07
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	1.87
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.93
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.93
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	0.93
COG3415	CRISPR-associated protein Csa3, CARF domain	Defense mechanisms [V]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.27 %
Unclassified	root	N/A	46.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.27 %
Unclassified	root	N/A	46.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.47 %
Unclassified	root	N/A	46.73 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.80 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.80 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.71 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	2.80 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	22.43 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.74 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	2.80 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.93 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	22.43 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.80 %
Actinomycetes incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetes incertae sedis	0.93 %
Haloferacales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Thermobaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum	0.93 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	22.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.80 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.93 %
Halopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetes incertae sedis → Halopolyspora	0.93 %
Thermobaculum terrenum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum	0.93 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.80 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.93 %
Halopolyspora algeriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetes incertae sedis → Halopolyspora → Halopolyspora algeriensis	0.93 %
Thermobaculum terrenum ATCC BAA-798	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum → Thermobaculum terrenum ATCC BAA-798	0.93 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.93 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.73 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.80 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.93 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.93 %
Halopolyspora algeriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetes incertae sedis → Halopolyspora → Halopolyspora algeriensis	0.93 %
Thermobaculum terrenum ATCC BAA-798	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum → Thermobaculum terrenum ATCC BAA-798	0.93 %
Haloferacaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	0.93 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000095\|LCrCPGB2aDRAFT_c013105	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c024459	Not Available	1122	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c047007	Not Available	760	Open in IMG/M
3300000750\|JGI12272J11983_1071306	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300000833\|JGI12273J12029_10138914	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Haloferacaceae	933	Open in IMG/M
3300006918\|Ga0079216_11823155	Not Available	523	Open in IMG/M
3300007790\|Ga0105679_10167906	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300007790\|Ga0105679_10317497	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300007790\|Ga0105679_10369926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum → Thermobaculum terrenum → Thermobaculum terrenum ATCC BAA-798	3350	Open in IMG/M
3300007790\|Ga0105679_10815641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1537	Open in IMG/M
3300009789\|Ga0126307_10007009	All Organisms → cellular organisms → Bacteria	8000	Open in IMG/M
3300009789\|Ga0126307_10032741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	4006	Open in IMG/M
3300009789\|Ga0126307_10075377	Not Available	2658	Open in IMG/M
3300009789\|Ga0126307_10396419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1113	Open in IMG/M
3300009789\|Ga0126307_10422383	Not Available	1075	Open in IMG/M
3300009789\|Ga0126307_10714358	Not Available	809	Open in IMG/M
3300009840\|Ga0126313_10095207	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300009840\|Ga0126313_11022405	Not Available	677	Open in IMG/M
3300010036\|Ga0126305_10270491	Not Available	1097	Open in IMG/M
3300010037\|Ga0126304_10616902	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	731	Open in IMG/M
3300010037\|Ga0126304_10759659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	657	Open in IMG/M
3300010037\|Ga0126304_10814590	Not Available	633	Open in IMG/M
3300010037\|Ga0126304_10912559	Not Available	597	Open in IMG/M
3300010038\|Ga0126315_10336114	Not Available	938	Open in IMG/M
3300010039\|Ga0126309_10005369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4962	Open in IMG/M
3300010039\|Ga0126309_10026987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2573	Open in IMG/M
3300010039\|Ga0126309_10039511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetes incertae sedis → Halopolyspora → Halopolyspora algeriensis	2201	Open in IMG/M
3300010039\|Ga0126309_10054180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1929	Open in IMG/M
3300010039\|Ga0126309_10375020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	844	Open in IMG/M
3300010039\|Ga0126309_10655976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	668	Open in IMG/M
3300010039\|Ga0126309_10735330	Not Available	637	Open in IMG/M
3300010039\|Ga0126309_11246968	Not Available	513	Open in IMG/M
3300010040\|Ga0126308_10015096	All Organisms → cellular organisms → Bacteria	4032	Open in IMG/M
3300010040\|Ga0126308_10354171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	973	Open in IMG/M
3300010041\|Ga0126312_10081095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2199	Open in IMG/M
3300010041\|Ga0126312_10534803	Not Available	840	Open in IMG/M
3300010041\|Ga0126312_10574696	Not Available	809	Open in IMG/M
3300010041\|Ga0126312_10617414	Not Available	780	Open in IMG/M
3300010041\|Ga0126312_11133296	Not Available	575	Open in IMG/M
3300010042\|Ga0126314_10034075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3212	Open in IMG/M
3300010042\|Ga0126314_10627867	Not Available	785	Open in IMG/M
3300010044\|Ga0126310_10081100	All Organisms → cellular organisms → Bacteria → Proteobacteria	1910	Open in IMG/M
3300010044\|Ga0126310_10107935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1700	Open in IMG/M
3300010044\|Ga0126310_10157678	Not Available	1452	Open in IMG/M
3300010044\|Ga0126310_10200431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1312	Open in IMG/M
3300010044\|Ga0126310_10454239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	926	Open in IMG/M
3300010045\|Ga0126311_10130524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1766	Open in IMG/M
3300010045\|Ga0126311_10298524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1212	Open in IMG/M
3300010045\|Ga0126311_10609035	Not Available	865	Open in IMG/M
3300010045\|Ga0126311_10682390	Not Available	820	Open in IMG/M
3300010166\|Ga0126306_11344356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	590	Open in IMG/M
3300010166\|Ga0126306_11654698	Not Available	534	Open in IMG/M
3300010166\|Ga0126306_11702141	Not Available	527	Open in IMG/M
3300013011\|Ga0169967_1001318	All Organisms → cellular organisms → Bacteria	9482	Open in IMG/M
3300013012\|Ga0169965_1015912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1842	Open in IMG/M
3300014488\|Ga0182001_10188782	Not Available	743	Open in IMG/M
3300018432\|Ga0190275_12867240	Not Available	557	Open in IMG/M
3300018465\|Ga0190269_10200078	Not Available	1081	Open in IMG/M
3300018465\|Ga0190269_11048368	Not Available	622	Open in IMG/M
3300018466\|Ga0190268_10115689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1286	Open in IMG/M
3300018875\|Ga0193608_1034707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1118	Open in IMG/M
3300018875\|Ga0193608_1068927	Not Available	781	Open in IMG/M
3300018877\|Ga0193600_1016050	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300018877\|Ga0193600_1075361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	807	Open in IMG/M
3300018891\|Ga0193610_1018235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1942	Open in IMG/M
3300018910\|Ga0193598_1101205	Not Available	664	Open in IMG/M
3300018914\|Ga0193594_1143280	Not Available	503	Open in IMG/M
3300018915\|Ga0193591_1041240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1641	Open in IMG/M
3300018915\|Ga0193591_1151357	Not Available	690	Open in IMG/M
3300018918\|Ga0193616_1047940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300018931\|Ga0193601_1173212	Not Available	568	Open in IMG/M
3300018933\|Ga0193614_1048127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1204	Open in IMG/M
3300018933\|Ga0193614_1083375	Not Available	895	Open in IMG/M
3300018933\|Ga0193614_1132674	Not Available	687	Open in IMG/M
3300018939\|Ga0193593_1024554	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300018939\|Ga0193593_1045324	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300018946\|Ga0193599_1021817	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300018946\|Ga0193599_1046416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1536	Open in IMG/M
3300018984\|Ga0193605_1034772	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1557	Open in IMG/M
3300018984\|Ga0193605_1041623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1419	Open in IMG/M
3300019132\|Ga0193604_1010460	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300019132\|Ga0193604_1012825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1426	Open in IMG/M
3300019135\|Ga0193602_1009910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2436	Open in IMG/M
3300019142\|Ga0193597_1019288	All Organisms → cellular organisms → Bacteria	2439	Open in IMG/M
3300019377\|Ga0190264_10197694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1104	Open in IMG/M
3300019767\|Ga0190267_10735851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	642	Open in IMG/M
3300030511\|Ga0268241_10033393	Not Available	1055	Open in IMG/M
3300031548\|Ga0307408_100374575	Not Available	1215	Open in IMG/M
3300031731\|Ga0307405_11836693	Not Available	539	Open in IMG/M
3300031852\|Ga0307410_10324503	Not Available	1223	Open in IMG/M
3300031995\|Ga0307409_101102067	Not Available	815	Open in IMG/M
3300031995\|Ga0307409_101438030	Not Available	716	Open in IMG/M
3300031995\|Ga0307409_101691712	Not Available	661	Open in IMG/M
3300032002\|Ga0307416_100251429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1721	Open in IMG/M
3300032002\|Ga0307416_101208090	Not Available	862	Open in IMG/M
3300032005\|Ga0307411_10568639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	970	Open in IMG/M
3300034005\|Ga0334930_095093	Not Available	533	Open in IMG/M
3300034007\|Ga0334936_035192	Not Available	1042	Open in IMG/M
3300034143\|Ga0334961_019725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1135	Open in IMG/M
3300034143\|Ga0334961_095178	Not Available	526	Open in IMG/M
3300034221\|Ga0334937_013738	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	2048	Open in IMG/M
3300034377\|Ga0334931_032026	Not Available	1134	Open in IMG/M
3300034377\|Ga0334931_089101	Not Available	715	Open in IMG/M
3300034402\|Ga0334960_017872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300034779\|Ga0334945_028837	Not Available	916	Open in IMG/M
3300034779\|Ga0334945_050241	Not Available	725	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.59%
Host-Associated	Host-Associated	8.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.59%
Plants	Host-Associated → Plants	8.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.41%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.07%
Sand	Environmental → Terrestrial → Soil → Sand	31.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.41%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	1.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.66%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	31.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.41%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	7.48%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	1.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	40.19%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	28.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	8.41%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.61%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	1.87%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000095	Soil microbial communities from Colorado Plateau, Green Butte sample - Light Crust, Colorado Plateau, Green Butte 2	Environmental	Open in IMG/M
3300000750	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000833	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate C) 0C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300013011	Gypsum crust endolithic microbial communities from the Atacama Desert, Chile - KM37	Environmental	Open in IMG/M
3300013012	Gypsum rock endolithic microbial communities from the Atacama Desert, Chile - Cordon de Lila	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018877	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018914	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018915	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018931	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018962	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300018984	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019132	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019135	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300019142	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034143	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNS	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M
3300034779	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 41SMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LCrCPGB2aDRAFT_0131053	3300000095	Soil	MVSRAWLSDQQKRRAARIAREKGLTCPDCGSSEPVPEDKARTHPGGGADIAIRCVDCESASEVTLILSPEEAKALGLGHALRGRPEDP*
LCrCPGB2aDRAFT_0244591	3300000095	Soil	VTGKVRLSDQQKHRAARIAQEKGLTCPDCGGSEPVPTDDEILAHQDGGADVSMRCEGCEGASEMALVLSPEEAKALGLHSLGERAQAP*
LCrCPGB2aDRAFT_0470072	3300000095	Soil	MVSRAWLSDQQKRRAARIAREKGLTCPACGSSEPVPEDKARTHPGGGADIAIRCVDCESASEMTLVLSPEEAKALGLGHALRGRPEDP*
JGI12272J11983_10713061	3300000750	Soil	EARLSDQQKRRAARMARAKGLTCPECGSSEPVPKDEVPARHPDGSADVAMDCEDCRTAAEMTLVLSPEEAEALGLHALRDRPETP*
JGI12273J12029_101389142	3300000833	Soil	MGSETRLSDQQKRRAARLAREKSLTCPACGSSEPVPKDKAPGRLPDGSVKVSMGCEDCRSAAEMTLMLSPEEAEALGLHALRDRPETP*
Ga0079216_118231551	3300006918	Agricultural Soil	VARKAWLSDRHKRRATQIAREKGFTCPDCGSSEPVPKDEVKVHSGGGADIAMRCVECESASEVTLVLSPEEAKALGLHSLGERPEAP*
Ga0105679_101679062	3300007790	Soil	VANSARLSDQQKDRAAQIAREKGLSCPDCGSSEPVPGDEARAHPGGADIAMRCVDCESASEMTLVLSPEEAKALGLGQALQDALEVP*
Ga0105679_103174972	3300007790	Soil	VPLSGEQRSRAAQIARDRDLTCPDCGSSEPVPEDEARVDPSGAADILMRCVNCESASEITLVLSPEEAKALGLHALRDAPRDPDDL*
Ga0105679_103699263	3300007790	Soil	MASRAWLSDQQKDRAAQIAREKDLSCPDCGSSEPVPEDEARMHPGGGADIAMRCVNCERASEVTLVLSPEEAKALGLGHALRDRPEVP*
Ga0105679_108156411	3300007790	Soil	MARLKAWLSERQKRRATRIAWEKGLTCPECGSSEPVPKDEVRVSPDGGADVLMRCEEKGCTNASEMALVLSPEEAKALGLHSLG
Ga0126307_100070093	3300009789	Serpentine Soil	VARKAWLSDRQKRRATGFAREKGLTCPECGSSEPVPKDDVRAHPDGGADVLMRCEEKGCTNVSEMALVLSPEEAKAFGLHSLGDRPEAP*
Ga0126307_100327413	3300009789	Serpentine Soil	VSEKTWLSDQQKRRATRFAREKGLTCPDCGGSEPVANDEVLAYPDGGADLSIRCEECEGTSEMALVLSPEEAKALGLHSLGEHPQAP*
Ga0126307_100753772	3300009789	Serpentine Soil	MARKAWLSDRHKRRATQLAREKGLTCPDCGSSEPVPNDEVRAHPDGGADVLMRCEDCESASEMALVLSPEEAEALGLHSLGERPQAP*
Ga0126307_103964191	3300009789	Serpentine Soil	VARLKAWLSDKQKRRATRIAREKGLTCPECGSSEPVPKDEVQAHPDGGANVLMRCEEKECTNTSEMALVLSPEEAKALGLHSLGERPEAR*
Ga0126307_104223832	3300009789	Serpentine Soil	VAKKVRLSDRHKRRATRLAREKGFSCPECGSSEPVPNDEVRVRPDGGADVLMRCEEKGCTNASEMAVVLSPEEAKALGLHSLGERPEVP*
Ga0126307_107143581	3300009789	Serpentine Soil	VVSRAQLSDQQKRRAARIAREKGLSCPDCGSPEPVPEDEVKVHSGGGADIAMRCVNCESASEVTLVLSPEEAQALGLGHALRDRPETP*
Ga0126313_100952073	3300009840	Serpentine Soil	MASRAWLSDQQKRRATRIAREKGLTCPDCGGSPEPAPEQEARAHPGGGADITMRCLNCESASEFALVLSPEEAKALGLHAL*
Ga0126313_110224051	3300009840	Serpentine Soil	VVSRAQLSDQQKRRAARIAREKGLSCPDCGSSEPVPEDEVKVHSGGGADIAMRCVNCESSSEVTLVLSPEEARALGLGHALRDRPETH*
Ga0126305_102704912	3300010036	Serpentine Soil	VTRKEWLSDQQKSRAAQIAREKGLTCPECGSSEPVPNEEVLAQPEGGAAVWMRCEACESALEMAIVLTPEEAKALGLHSLGEHPQAP*
Ga0126304_106169021	3300010037	Serpentine Soil	MAKKARLSDRQKRRAARIAREKGLTCPDCGGSPEPVPENEARVHPGGGAEIAMRCLNCERTSEVTLVLSPEEAKALGLHALRDHSEAP*
Ga0126304_107596591	3300010037	Serpentine Soil	AWLSDQQKRRATRMAREKGLTCPDCGSSEPVPEDEARAYPGGGADIAMRCLNCESASEVTLVLSPEEAKALGLHALRDPQRRPENPS*
Ga0126304_108145901	3300010037	Serpentine Soil	WALRLKLSVTRKKIVTRKAWLSDQQQRRARQLAREKDLTCPECGGSEPVPTDEVRAHPDGGADLSMRCEECESALEMAVVLTPEEAKALGLHSLGESPQAP*
Ga0126304_109125591	3300010037	Serpentine Soil	KARLSDQQKRQATQLARHKSLTCPDCGGSEPVPIEEEVRAHADGGADVLMRCEACEGTSEMALVLSPEEAEVLGLHSLGGDREAP*
Ga0126315_103361142	3300010038	Serpentine Soil	MARKAWLSDRHKRRATQLAREKGLTCPDCGSSEPVPNDEVRAHPDGGADVLMRCEDCESASEMALVLSPEEAEALGLHSLGERPEAP*
Ga0126309_100053691	3300010039	Serpentine Soil	VSENTWLSDQQKRRATRFALEKGLTCPDCGGSEPVANDEVLAYPDGGADLSMRCEECEGTSEMALVLSPEEAKALGLHSLGEHPQAP*
Ga0126309_100269872	3300010039	Serpentine Soil	MGSEARLSDQQKRRATKMAREKDLTCSDCGASEPVPKDEVPARHPDGGAEVAMSCVECESASEMTLVLSPEEAEALGLHALRDRPETP*
Ga0126309_100395114	3300010039	Serpentine Soil	VSRKAGLSDQQKRRATWLAREKGLSCPDCGGSEPVPNDEVLAHPDGGAAVSMRCEECEGAFEMALALSPEEAKALGLHSLGESPQAS*
Ga0126309_100541803	3300010039	Serpentine Soil	VARLKAWLSDKQKCRATRIAREKGLTCPECGSSEPVPKDEVQAHPDGGANVLMRCEEKECTNTSDMALVLSPEEAKALGLHSLGESPEAR*
Ga0126309_103750202	3300010039	Serpentine Soil	VASRAWLSDQQKRRATRIAREKGLTCPDCGGSPEPAPEDEVRAHPGGGADITMRCLNCESASEFALVLSPEEAKALGLHALRDRPEAP*
Ga0126309_106559761	3300010039	Serpentine Soil	VVSRAWLSDQQKRRAARIAREKGLSCPDCGSSEPVPEDEVKVHSGGGADIAMRCVNCESSSEVTLVLSPEEARAL
Ga0126309_107353301	3300010039	Serpentine Soil	MSLSDEQKRNATRLARQKGLTCPDCGSSEPVPEDEVQVHPGGGVEIAMRCENCEGVSEVALVLSPEEAKALGLGHALRERREETL*
Ga0126309_112469681	3300010039	Serpentine Soil	VASRTWLSDQQKRRAAEIAREKGLSCPDCGSSEPVPGDEAWAHPGGADIAMRCVNCESASEMTLVLSPEEAKALGLGQALQDDSEVH*
Ga0126308_100150964	3300010040	Serpentine Soil	VARLRAWLSDPQKRRATRIAREKGLTCPECGSSEPAPRDEVWAHPDGGVDLLMRCEEKECTNASEMALVLSPEEAKAFGLHSLGERPEAP*
Ga0126308_103541711	3300010040	Serpentine Soil	VARLKAWLSDKQKRRATRNAREKGLTCPECGSSEPVPKDEVQAHPDGGANVLMRCEEKECTNTSEMALVLSPKEAKALGLHTLGERPEAR*
Ga0126312_100810951	3300010041	Serpentine Soil	VSEKTWLSDQQKRRATRFAREKGLTCPDCGGSEPVANDEVLAYPDGGADLSIRCEECEGTSEIALVLSPEEAKALGLHSLGEHPQAP*
Ga0126312_105348031	3300010041	Serpentine Soil	VASRTWLSDQQKRRAAEIAREKGLSCPDCGSSEPVPGDEARAHPGGADIAMWCVNCESASEMTLVLSPEEAKALGLGQALQDDSEVH*
Ga0126312_105746961	3300010041	Serpentine Soil	VTSRPRLSDQQKRRAARIAREKGLTCPECGSSEPVPEAEARAHLDDGGTDIAMRCVDCESASEVTLVLTPEEAKALGLTRA
Ga0126312_106174141	3300010041	Serpentine Soil	QQKRRAARIAREKGLSCPDCGSSEPVPEDEVKVHSGGGADIAMRCVNCESASEVTLVLSPEEAKALGLGHALRDRPETP*
Ga0126312_111332962	3300010041	Serpentine Soil	SEKTWLSDQQKRRATRFAREKGLTCPDCGGSEPVTNDEVLAYPDGGADLSIRCEECEGTSEMALVLSPEEAKALGLHSLGEHPQAP*
Ga0126314_100340757	3300010042	Serpentine Soil	VARLKAWLSDKQKRRATRIAREKGLTCPECGSSEPVPKDEVQAHPDGGANVLMRCEEKECTNTSEMALVLSPKEAKALGLHTLGERPEAR*
Ga0126314_106278671	3300010042	Serpentine Soil	VARLKAWLSDRQKRRATRIAREKGLTCPECGSSEPVPNDEVRVRPEGGADVLMRCEEKECTNASEMALVLSPEEAKALGLHSLGERPEAP*
Ga0126310_100811002	3300010044	Serpentine Soil	VAIKAWFSDQQRRRAARIAREKGLTCPDCGGSPEPVPENEARVQPGGGAEIAMRCLNCERTSEVTLVLSPEEAKALGLHALRDHPEAP*
Ga0126310_101079352	3300010044	Serpentine Soil	VASRTWLSDQQKRRAAEIAREKGLSCPDCGSSEPVPGDEARAHPGGADIAMRCVNCESASEMTLVLSPEEAKALGLGQALQDDSEVH*
Ga0126310_101576781	3300010044	Serpentine Soil	VARLKAWLSDRHKRRATRIAREKGLTCPECGSSEPVPDDEVRVRPDGGADVLMRCEEKECTNASEMALVLSPEEAKALGLHSLGERPQAP*
Ga0126310_102004312	3300010044	Serpentine Soil	VVSRAWLSDQQKHRAVRIAREKGLSCPDCGSSEPVPEDEVKVHSGGGADIAMRCVNCESASEVTLVLSPEEAKALGLGHALRDRPETP*
Ga0126310_104542391	3300010044	Serpentine Soil	MLSRAWLSDQQKRRAARIAREKGLSCPDCGSSEPVPEDEVKVHSGGGADIAMRCVNCESASEVTLVLSPEEAKALGLGHALRDHPET
Ga0126311_101305241	3300010045	Serpentine Soil	VVSRAQLSDQQKRRAARIAREKGLSCPDCGSSEPVPEDEVKVHSGGGADIAMRCVNCESSSEVTLVLSPEEARALGLGHALRDRPETP*
Ga0126311_102985242	3300010045	Serpentine Soil	VAIKAWFSDQQRRRAARIAREKGLTCPDCGGSPEPVPENEARVHPGGGAEIAMRCLNCERTSEVTLVLSPEEAKALGLHALRDHPEAP*
Ga0126311_106090352	3300010045	Serpentine Soil	VARLKAWLSDKQKRRATRIAREKGLTCPECGSSEPVPKDEVQAHPDGGANVLMRCEEKECTNTSEMALVLSP
Ga0126311_106823902	3300010045	Serpentine Soil	VASRTWLSDQQKRRAAEIAREKGLSCPDCGSSEPVPGDEARAHPSGGADVVMRCVNCESASEMTLVLSPEEAKALGLGQAL*
Ga0126306_113443562	3300010166	Serpentine Soil	VSEKTWLSDQQKRRATRFAREKGLTCLDCGGSEPVANDEVLAYPDGGADLSIRCEECEGTSEMALVLSPEEAKALGLHSLGEHPQAP*
Ga0126306_116546981	3300010166	Serpentine Soil	VVSRAQLSDQQKRRAARIAREKGLSCPDCGSPEPVPEDEVKVHSGGGADIAIRCVNCESASEVTLVLSPEEAKALGLGHALRDRPETP*
Ga0126306_117021412	3300010166	Serpentine Soil	ARKAWLSDRQKRRATGFAREKGLTCPECGSSEPVPKDDVRAHPDGGADVLMRCEEKGCTNVSEMALVLSPEEAKAFGLHSLGDRPEAP*
Ga0169967_100131813	3300013011	Rock	VTGKTRLSDPQKRRAARIAREKGLTCPDCGSSEPVPKDEVRAHPDGGAELAMRCEDCESTTEVALVLSPEEAKALGLHSLRDLPEAP*
Ga0169965_10159123	3300013012	Rock	MTGNAWLSDRQKHRATRIAREKDLTCPDCGGQEPVPKDEARTRSDGGADVALRCVKCESATEITLVLSPEEAKSLGLHALRDDPQTP*
Ga0182001_101887822	3300014488	Soil	VLSRAWLSDPQKRRAARIAREKGLSCPDCGSSEPVPEDEVKVHSGDGADIAMRCVNCQSAPEMTLVLSPEEAKALGLGHALGDRSETP*
Ga0190275_128672401	3300018432	Soil	VPRKVRLSDQQKRRATRIAREKGLTCPDCGGSEPVPNDEVLAHPDGGADVSMRCEACEGTSEMALVLSPEEAKALGLHSLGENQQAP
Ga0190269_102000782	3300018465	Soil	VASRAWLSDQQKRRAARIAREKGLTCPDCGGSPEPAPEEARAHPGGGADITMRCLNCESASEFALVLSPEEAKALGLHAL
Ga0190269_110483681	3300018465	Soil	VSEKTWLSDQQKRRATRFAREKGLTCPDCGGSEPVANNEVLAYPDGGAYLSMRCEECEGTSEMALVLSPEEAKALGLHSLGEHPQAP
Ga0190268_101156891	3300018466	Soil	VASRAWLSDQQKRRATRIAREKGLTCPDCGGSPEPAPEEARAHPGGGADITMRCLNCESASEFALVLSPEEAEALGFRSLGGGPEAR
Ga0193608_10347072	3300018875	Soil	MVSRAWLSDQQKRRAARIAREKGLTCPACGSSEPVPEDKARTHPGGGADIAIRCVDCESASEVTLVLSPEEAKALGLGHALRGRPEDP
Ga0193608_10689272	3300018875	Soil	VASRARLSYQQKDPAAQIAREKNLKYRDCGSSEPVPGYEARAHPGCGADIVMRCVNCESKFEMTLVLSPRGSKALGRGHALQDDS
Ga0193600_10160502	3300018877	Soil	VTGETRLSDIQKRRAARIAHEKGLTCPDCGSSEPVPKDEVRAHPGGADVAMRCEDCENATEMTLVLSPEEAKALGLHALRNLP
Ga0193600_10753611	3300018877	Soil	MVSRAWLSDQQKRRAARIAREKGLTCPDCGSSEPVPEDKARTHPGGGADIAIRCVDCESASEVTLVLSPEEAKALGLGHAL
Ga0193610_10182352	3300018891	Soil	MVSRAWLSDQQKRRAARIAREKGLTCPDCGSSEPVPEDKARTHPGGGADIAIRCVDCESASEVTLVLSPEEAKALGLGHALRGRPEDP
Ga0193598_11012051	3300018910	Soil	TRVVTGEARLSDIQKRRATRIAREKGLTCPDCGSSEPVPKDEVRAHPGGADVAMRCEDCENATEMTLVLSPEEAKALGLHALRDRPETS
Ga0193594_11432801	3300018914	Soil	MGSEARLSDQQKRRAARMARAKGLTCPECGSSEPVPKNEVPARHPDGSADVAMDCEDCRTAAEMTLVLSPEEAEALGLHALRDRPETP
Ga0193591_10412403	3300018915	Soil	VTGETRLSDIQKRRAARIAHEKGLTCPDCGSSEPVPKDEVRAHPGGADVAMRCEDCENATEMTLVLSPEEAKALGLHALRDLP
Ga0193591_11513572	3300018915	Soil	AELSNQQKRRATRIARERGLTCPDCGGSEPVPNDEVLAHPDGGADVSMRCEECEGASEMALVLSPAEAKALGLHSLGESPQAS
Ga0193616_10479402	3300018918	Soil	VTGKARLSDIQKRRATRIAREKGLTCPDCGSSEPVPKDEVRAHPGGADVAMRCEDCENATEMTLVLSPEEAKALGLHALRDLPQAP
Ga0193601_11732121	3300018931	Soil	MVSRAWLSDQQKRRAARIAREKGLTCPACGSSEPVPEDKARTHPGGGADIAIRCVDCESSSEMTLVLSPEEAKALGLGHALRGRPEDP
Ga0193614_10481271	3300018933	Soil	VASRAWLSDQQKRRATRIAREKGLTCPDCGGSPEPAPEEARAHPGGGADITMRCLNCESASEFALVLSPEEAKALGLHALRDRPEAP
Ga0193614_10833751	3300018933	Soil	VSRKARLSDQQKRQATRIAWEKGLTCPDCGGSEPVPNDEVLAHPDGGADVWMRCEECEGASEMALVLSPEEAKALGLHSLGKSTQAP
Ga0193614_11326741	3300018933	Soil	VASKVWLSDQQKRRAAQIAREKNLSCPDCGSSEPVPEEARAYPGGGADIAMRCIDCESASEVTLVLSPEEAKALGLGHALRKPPQGPENLSR
Ga0193593_10245541	3300018939	Soil	KVWLSDQQKRRAAQIAREKNLSCPDCGSSEPVPEEARAYPGGGADIAMRCIDCESASEVTLVLSPEEAKALGLGHALRKPPQGPENLSR
Ga0193593_10453242	3300018939	Soil	VPLSGEQRSRAAQIARNRDLTCPGCGSSEPVPEDEARVHPSGAADILMRCVNCESASEITLVLSPEEAKALGLHSLRDAPRHPDDL
Ga0193599_10218172	3300018946	Soil	MGSETRLSDQQKRRAARLAREKSLTCPACGSSQPVPKDKIPARHPDGSADVVMGCKDCRSAAEMTLVLSPEEAEALGLHALRDRSETP
Ga0193599_10464161	3300018946	Soil	VVSRAMLSDQQKRRAARIAREKGLSCPDCGSSEPVPEDEVKVHSGGSANIAMRCVNCKSASEVTLVLSPEEAKALGLGHALRDRPETL
Ga0193589_11588281	3300018962	Soil	PAAQIAREKNLKYRDCGSSEPVPGDEARAHPGCGADIVMRCVNCESESEMTLVLSPRGSKALGRGHALQDDS
Ga0193605_10347722	3300018984	Soil	MGSEARLSDQQKRRVARIAWEKSLTCPACGSSQPVPKDKIPARHPDGSADVVMGCKDCRSAAEMTLVLSPEEAKALGLHALRDRPERP
Ga0193605_10416233	3300018984	Soil	VTRKARLSDQQKRQATQVARQKGLTCPDCGGSEPVPIEDEVRAHADGSADVLMRCQECEGTSEMALVLSPEEAEALGLHSLGGDREAP
Ga0193604_10104601	3300019132	Soil	VTRKAWLSDQQKRQATQVARQKGLTCPDCGGSEPVPIEDEGRAHADGGADVLMRCQECEGTSEMALVLSPEEAEALGLHSLGGDREAP
Ga0193604_10128252	3300019132	Soil	MVSRAWLSDQQKRRAARIAREKGLTCPACGSSEPVPEDKARTHPGGGADIAIRCVDCESASEVTLVLSPEEAKAL
Ga0193602_10099102	3300019135	Soil	MVSRAWLSDQQKRRAARIAREKGLTCPDCGSSEPVPEDKARTHPGGGADIAIRCVDCESASEMTLVLSPEEAKALGLGHALRGRPEDP
Ga0193597_10192883	3300019142	Soil	MGSETRLSDQQKRRAARLAREKSLTCPACGSSEPVPKDKAPGRLPDGSVKVSMGCEDCRSAAEMTLMLSPEEAEALGLHALRDRPETP
Ga0190264_101976942	3300019377	Soil	VTRKAWLSDQQKRQATQVARQKGLTCPDCGGSEPVPIEDEVRAHADGGADVLMRCQECEGTSEMALVLSPEEAEALGLHSLGGDREAP
Ga0190267_107358511	3300019767	Soil	MLSRAWLSDQQKRRAARIAREKGLSCPDCGSSEPVPEDEVKVHSGGGADIAMRCVNCESASEVTLVLPRRG
Ga0268241_100333933	3300030511	Soil	HAARIAREKGLTCPDCGSSGPVPGDEARTRPGVGADIAMRCVNCEGASEMTLVLSPKEAKALGLGQSLQDDSEAP
Ga0307408_1003745751	3300031548	Rhizosphere	MTRKAWLSDQQKRRATQLAREKGLTCPDCGGSESVPIEDEVLAHPDGGADVLMRCEECEGASEMALVLSPEEAEALGLHSLGEHPQAP
Ga0307405_118366931	3300031731	Rhizosphere	MTGKAWLSDQKKRRATRLAREKDLTCPDCGGSEPVPIEDEVLAHPDGGADVLMRCEECEGASEMALVLSPEEAEALGLHSLGEHPQAP
Ga0307410_103245032	3300031852	Rhizosphere	MTRKAWLSDQQKRRATRLAREKDLTCPDCGGSEPVPIEDEVLAHPDGGADVLMRCEECEGASEMALVLSPEEAEALGLHSLGEHPQAP
Ga0307409_1011020671	3300031995	Rhizosphere	MTGKAWLSDQQKRRATRLAREKDLTCPDCGGSEPVPIEDEVLAHPDGGADVLMRCEECEGASEMALVLSPEEAEALGLHSLGEHPQAP
Ga0307409_1014380301	3300031995	Rhizosphere	MTRKARLTDQQKRQATQLARHKSLTCPDCGASEPVPIEDEVRAHADGGADVLMRCQECEGTSEMALVLSPEEAEALGFHSLGGDREAP
Ga0307409_1016917121	3300031995	Rhizosphere	VAWKAWLSNQQKRRAARIAREKGLTCPDCGSSEPVPEDEARPHPGGGADIAMRCVNCERASEVTLVLSPEEAKALGLGHALRDRPETP
Ga0307416_1002514293	3300032002	Rhizosphere	VASRAWLSDQHKRRAARIAREKGLACPECGSSEPVPEDEARAYPGGGADIAMRCLNCESASEVTLVLSPEEAKALGLHALRDRPEAP
Ga0307416_1012080902	3300032002	Rhizosphere	VARLKAWLSDRHKRRATRLAREKGFSCPECGSSEPVPNDEVEAHQDGSVDVLMRCEEKECTNALEMALVLSPEEAKALGLHSLGERPQAP
Ga0307411_105686392	3300032005	Rhizosphere	VARLKAWLSDKQKRRATRIAREKGLTCPECGSSEPVPKDEVQAHPDGGANVLMRCEEKECTNTSEMALVLSPEEAKALGLHSLGERPEAR
Ga0334930_095093_68_328	3300034005	Sub-Biocrust Soil	VPLSGEQRSRVAQIAREGNLTCPDCGSSEPVPQDEARVHPSGAADILMRCVDCESASEMTLVLSPEEAEALGLHALRDAPRDPEAS
Ga0334936_035192_503_766	3300034007	Biocrust	MAQKAGFSDLQKRRVTRIAQEKGLTCPDCGSSEPVPKDEVRARSGGGADVTMRCEDCENKMEMALVLSPEESKALGLHSLGDRPEAP
Ga0334961_019725_649_894	3300034143	Sub-Biocrust Soil	VASRAWLSDQQKRRATRIAREKGLTCPDCGGSPEPAPEQEARAHPGGGADITMRCLNCESASEFALVLSPEEAKALGLHAL
Ga0334961_095178_74_325	3300034143	Sub-Biocrust Soil	VARKTWLSDRHKRRATRIAQEKGLTCPECGSSEPVPKDEIRAHPDGGVNVLMRCEEKECSNASEMALVLSPEEAKALGLHSLG
Ga0334937_013738_1212_1478	3300034221	Biocrust	MGSEARLSDQQKRRAARMARGKGLTCPECGSSEPVPKDEIPARHPDGSADVAMDCEDCRTAAEMTLVLSPEEAEALGLHALRDRPETP
Ga0334931_032026_620_877	3300034377	Sub-Biocrust Soil	MTLSGEQKRRTARLVQQKGLRCPDCGSSEPVPEDEVRVHPGGGVEIAMRCENCEGASDVALVLSPEEAKALGLGHALREYPEETP
Ga0334931_089101_28_273	3300034377	Sub-Biocrust Soil	VVSRAWLSDQQKRRATRIAREKGLTCPDCGGSPEPAPEQEARAHPGGGADITMRCLNCESASEFALVLSPEEAKALGLHAL
Ga0334960_017872_475_741	3300034402	Sub-Biocrust Soil	VVSRASLSDQQKRRAARIAREKGLSCPDCGSSEPVPEDEARTHPGGGADILMRCVDCESASEVTLVLSPEEAKALGLGHALGDHPETP
Ga0334945_028837_317_574	3300034779	Sub-Biocrust Soil	MTLSGEQKRRTARLAQQKGLRCPDCGSSEPVPEDEVRVHPGGGVEIAMRCENCAGASDVALVLSPEEAKALGLGHALREYPEETP
Ga0334945_050241_13_276	3300034779	Sub-Biocrust Soil	MAQKAGFSDLQKRRVTRIAQEKGLTCPDCGSSEPVPKDEVRARSGGGADVTMRCEDCENKTEMALVLSPEESKALGLHSLGDRPEAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091452

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences