Metagenome / Metatranscriptome Family F091424

Basic Information
Family ID	F091424
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	45 residues
Representative Sequence	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKAT
Number of Associated Samples	88
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	28.04 %
% of genes from short scaffolds (< 2000 bps)	24.30 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (71.963 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (21.495 % of family members)
Environment Ontology (ENVO)	Unclassified (57.944 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (71.028 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 23.91% Coil/Unstructured: 76.09%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF07659	DUF1599	71.03
PF13155	Toprim_2	4.67
PF12705	PDDEXK_1	1.87
PF13362	Toprim_3	0.93
PF05257	CHAP	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.96 %
All Organisms	root	All Organisms	28.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.96 %
Viruses	superkingdom	All Organisms → Viruses	28.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.96 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	20.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.96 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	20.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.96 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	20.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.96 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	20.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.96 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	17.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.96 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17.76 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.48 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003404\|JGI25920J50251_10140474	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	529	Open in IMG/M
3300003411\|JGI25911J50253_10056355	All Organisms → Viruses → Predicted Viral	1322	Open in IMG/M
3300004112\|Ga0065166_10241513	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	723	Open in IMG/M
3300005580\|Ga0049083_10256473	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	588	Open in IMG/M
3300005805\|Ga0079957_1181569	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1034	Open in IMG/M
3300007538\|Ga0099851_1271531	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	603	Open in IMG/M
3300007538\|Ga0099851_1290742	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	578	Open in IMG/M
3300007542\|Ga0099846_1210100	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	684	Open in IMG/M
3300008107\|Ga0114340_1041990	All Organisms → Viruses → Predicted Viral	3973	Open in IMG/M
3300008107\|Ga0114340_1176567	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	752	Open in IMG/M
3300008110\|Ga0114343_1038881	All Organisms → Viruses → Predicted Viral	1920	Open in IMG/M
3300008266\|Ga0114363_1020171	All Organisms → Viruses → Predicted Viral	4818	Open in IMG/M
3300008448\|Ga0114876_1001341	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	18275	Open in IMG/M
3300009068\|Ga0114973_10555412	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	591	Open in IMG/M
3300009180\|Ga0114979_10538182	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	672	Open in IMG/M
3300009181\|Ga0114969_10273603	All Organisms → Viruses → Predicted Viral	1006	Open in IMG/M
3300009183\|Ga0114974_10051751	All Organisms → Viruses → Predicted Viral	2753	Open in IMG/M
3300009184\|Ga0114976_10085924	All Organisms → Viruses → Predicted Viral	1809	Open in IMG/M
3300010160\|Ga0114967_10385187	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	702	Open in IMG/M
3300017774\|Ga0181358_1067118	All Organisms → Viruses → Predicted Viral	1329	Open in IMG/M
3300022200\|Ga0196901_1145046	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	794	Open in IMG/M
3300027707\|Ga0209443_1142141	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	879	Open in IMG/M
3300027734\|Ga0209087_1246415	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	662	Open in IMG/M
3300027782\|Ga0209500_10356198	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	602	Open in IMG/M
3300027785\|Ga0209246_10382871	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	531	Open in IMG/M
3300027816\|Ga0209990_10233909	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	841	Open in IMG/M
3300031787\|Ga0315900_10616340	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	789	Open in IMG/M
3300031857\|Ga0315909_10627236	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	712	Open in IMG/M
3300034066\|Ga0335019_0777783	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	542	Open in IMG/M
3300034117\|Ga0335033_0261571	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	904	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.07%
Terrestrial	Environmental → Terrestrial	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.65%
Marine	Environmental → Aquatic → Marine	8.41%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.93%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	40.19%
Lentic	Environmental → Aquatic → Freshwater → Lentic	29.91%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	12.15%
Coastal	Environmental → Aquatic → Marine → Coastal	5.61%
River	Environmental → Aquatic → Freshwater → River	4.67%
Ice	Environmental → Aquatic → Freshwater → Ice	1.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.87%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.93%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	38.32%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	28.97%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	12.15%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	4.67%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.87%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.87%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	21.50%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	16.82%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	12.15%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	10.28%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.48%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	6.54%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	5.61%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	4.67%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.87%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.87%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.87%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.93%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.93%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.93%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	0.93%
Surface Ice	Environmental → Aquatic → Freshwater → Ice → Unclassified → Surface Ice	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.93%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.93%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001850	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2a	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002471	Freshwater microbial communities from San Paulo Zoo lake, Brazil - MAY 2013	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004128	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (version 2)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300007216	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface and Bottom layer) 16 sequencing projects	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008258	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300008264	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTR	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010374	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S-1-Day17	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental	Open in IMG/M
3300012013	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 67 - Surface Ice	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024352	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_0h	Environmental	Open in IMG/M
3300024357	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8d	Environmental	Open in IMG/M
3300024866	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300026478	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027649	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300028103	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8d	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300028557 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_4m	Environmental	Open in IMG/M
3300029930	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM37_10076475	3300001850	Marine Plankton	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTVTTSTNKA
B570J29032_1095955084	3300002408	Freshwater	VKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNK
metazooDRAFT_14975964	3300002471	Lake	MIKRFGPYKGSKQNGGRPIYVFKRKKKDGTVVTTSSNKARVDYEDSTGKT
JGI25908J49247_101171081	3300003277	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVFKRKRKDGTVETTSSNKARVDYEKATGKSLPR
JGI25920J50251_101404741	3300003404	Freshwater Lake	VRIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKATGKKLKRN
JGI25911J50253_100563555	3300003411	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYK
Ga0066177_100408191	3300004096	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVFKRKRKDGSVETTSSNKARVDYEK
Ga0065166_102415131	3300004112	Freshwater Lake	MRFGPYKGSKQNGGRPIYVFKRKKKNGEVVTTSSNKARVDYE
Ga0066180_103704441	3300004128	Freshwater Lake	MKIFGPYKGSKANGGRPIYVFKRKKKDGTTTTTSSNKARVDYEKATGKTL
Ga0068876_105189461	3300005527	Freshwater Lake	MKKSIKKTIKRIFGPYKGSEQNGGRPIYVIKKRTKDGKVVTTSSNKA
Ga0049083_102564732	3300005580	Freshwater Lentic	MKIFGPYKGSKQNGGRPIFVIKRKKKDGTTETTSTNKARLDYKKATGKKLTR
Ga0049081_103504511	3300005581	Freshwater Lentic	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTESTSTN
Ga0049080_102885033	3300005582	Freshwater Lentic	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTESTSTNKARLDYKKATG
Ga0049084_101199251	3300005585	Freshwater Lentic	MKIFGPYKGSKQNGGRPIFVIKRKKKDGTTETTSTNKARLD
Ga0079957_11815691	3300005805	Lake	MGQMKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETT
Ga0079957_12993251	3300005805	Lake	MKKYGPYKGSKQNGGRPIYVFKKKKNGKTVTTSSNKARVDLEEST
Ga0103961_10623074	3300007216	Freshwater Lake	VIKKFGPYKGSKQNGGRPIYVFKRKKKDGTTVTTSSNKA
Ga0099851_12715313	3300007538	Aqueous	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARHEYEESTGKKLP
Ga0099851_12907421	3300007538	Aqueous	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARHEYEESTGKKLPR
Ga0099846_12101003	3300007542	Aqueous	MKIFGPYKGSKQNGGRPIYVIKRKKKDGSTTTTSTNKARKDYEDATGKTLPK
Ga0114340_10419909	3300008107	Freshwater, Plankton	MRKIFGPYKGSKQNGGRPIYVFKRKKKDGTVVTTSSNKARVDYEEAT
Ga0114340_11765674	3300008107	Freshwater, Plankton	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKATGKKLKR
Ga0114343_10388815	3300008110	Freshwater, Plankton	MRKIFGPYKGSKQNGGRPIYVFKRKKKDGTVVTTSSNKARVDYEEATGKK
Ga0114343_11341801	3300008110	Freshwater, Plankton	MKIFGPYKGSKQNGGRKIYVFKRKKKDGTTVTTSSNKA
Ga0114346_100523119	3300008113	Freshwater, Plankton	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDFKRATM*
Ga0114840_10402203	3300008258	Freshwater, Plankton	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTPTNKARLDYKKAT
Ga0114840_10409391	3300008258	Freshwater, Plankton	MKIFGPYKGSKQNGGCPIYVIKRKKKDGTTETTSTNKARL
Ga0114336_11632351	3300008261	Freshwater, Plankton	MGEVKIFGPYKGSKQNGGRPIYVIKRKKKDGSTETTST
Ga0114337_12594813	3300008262	Freshwater, Plankton	MRKIFGPYKGSKANGGRPIYVFKRKKKDGTVVTTSSNKARVDYE
Ga0114353_11255421	3300008264	Freshwater, Plankton	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKATGKK*
Ga0114363_10201711	3300008266	Freshwater, Plankton	VKIFGTYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARHDYKKATGKKLK
Ga0114876_10013411	3300008448	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDFKRATGKKLKR
Ga0114973_105554123	3300009068	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKATGKKLKRNQ
Ga0114968_101800751	3300009155	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKK
Ga0114968_103876383	3300009155	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSKQSPIGL*
Ga0114979_102510551	3300009180	Freshwater Lake	MKKIFGPYKGSKANGGRPIYVFKRKKKDGTVATTSSNKARVDYEKAT
Ga0114979_105381823	3300009180	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVFKRKKKDGTVVTTSS
Ga0114969_102736034	3300009181	Freshwater Lake	MKIFGPYKGSKANGGRPIYVIKRKKKDGSTTTTSTNKAR
Ga0114974_100517517	3300009183	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVFKRKKKDGTVVTTSSNKARVDYEEAT
Ga0114976_100859245	3300009184	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVFKRKKKDGTTVTTSSNKARVDYEKT
Ga0114967_102042841	3300010160	Freshwater Lake	MKIFGPYKGSKANGGRPIYVIKRKKKDGTTETTSTNKARLDY
Ga0114967_103851874	3300010160	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKATGKKLKRN
Ga0114986_11071042	3300010374	Deep Subsurface	MKIFGPYKGSKQNGGRPIYVFKRKKKDGTTVTTSSNKARVEYEKAT
Ga0133913_131273694	3300010885	Freshwater Lake	VKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKATGKKL
Ga0139557_10692511	3300011010	Freshwater	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTTTTSTNKARLD
Ga0153805_10861773	3300012013	Surface Ice	MKKIFGPYKGSKANGGRPIYVFKRKKKDGTVATTSSNKARVDYEESTGKK
(restricted) Ga0172367_104356821	3300013126	Freshwater	MAKKYGPYKGSKQNGGRPIYVFKKKKNGKTVTTSSNKARVDYE
(restricted) Ga0172376_100773051	3300014720	Freshwater	MGKMKKFGPYKGSKQNGGRPIYVFKKKKNGKTVTTSSNKARVDFEE
Ga0181362_11221282	3300017723	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTTTTSTNKARLDYKKATG
Ga0181343_11470783	3300017766	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETSST
Ga0181358_10671181	3300017774	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTTTTSTNKARLDYKKATGKKLKRNQE
Ga0181357_12608103	3300017777	Freshwater Lake	MKKIFGPYKGSKANGGRPIYVFKRKKKDGTVATTSSNKARVDYEESTGKTLP
Ga0181349_10820421	3300017778	Freshwater Lake	VRIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKAT
Ga0181348_12679231	3300017784	Freshwater Lake	MKKIFGPYKGSKANGGRPIYVFKRKKKDGTVATTSSNKARVDYEESL
Ga0181359_12668091	3300019784	Freshwater Lake	MKIFGPYKGSKQNGGRPIFVIKRKKKDGTTETTSTNKARLDY
Ga0207193_13661674	3300020048	Freshwater Lake Sediment	MKIFGPYKGSKQNGGRPIYVFKRKKKDGSTVTTSSNKARVDYEKAT
Ga0222713_107913142	3300021962	Estuarine Water	MKIFGPYKGSKQNGGRKIYVFKRKKKDGTTVTTSSNKARVDYEKRT
Ga0181354_12196311	3300022190	Freshwater Lake	MKIFGPYKGSKANGERPIYVFKRKKKDGTTTTTSSNKARVDYEKA
Ga0196901_11450463	3300022200	Aqueous	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARHEYEESTGKKLPRN
Ga0214921_101107555	3300023174	Freshwater	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDFKRATGK
Ga0244776_103872981	3300024348	Estuarine	MKIFGPYKGSKQNGGRPIYVFKRKKKDGTTTTTSSNKARVD
Ga0244776_107590733	3300024348	Estuarine	MKIFGPYKGSKQNGGRPIYVFKRKKKDGTTTTTSSNK
Ga0255142_10104181	3300024352	Freshwater	MKIFGPYKGSKQNGGRPIYVFKRKKKDGTTVTTSSNKARVDYEKATGKTLPK
Ga0255165_10530181	3300024357	Freshwater	MKIFGPYKGSKQNGGRPIYVFKRRKKNGEVVTTSSNKARVDYEKSTGKTLPR
Ga0255272_11728433	3300024866	Freshwater	MIKRFGPYKGSKQNGGRPIYVFKRRKKNGEVVTTSSNKARVD
Ga0208161_10471035	3300025646	Aqueous	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTN
Ga0208160_100239813	3300025647	Aqueous	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARHEYEES
Ga0255156_10257601	3300026478	Freshwater	MKIFGPYKGSKQNGGRPIYVFKRKKKDGTTVTTSS
Ga0209552_10184575	3300027563	Freshwater Lake	MKIFGPYKGSKQNGGRPIFVIKRKKKDGTTETTSTNKARLDYKKAT
Ga0208960_11611732	3300027649	Freshwater Lentic	MKIFGPYKGSKQNGGRPIFVIKRKKKDGTTETTSTNKARLDYKKATGK
Ga0208975_11221634	3300027659	Freshwater Lentic	MKKIFGPYKGSKANGGRPIYVFKRKKKDGTVATTSSNKARVDYEEST
Ga0208975_11452683	3300027659	Freshwater Lentic	MKIFGPYKGSKQNGGRPIFVIKRKKKDGTTETTSTNKARLDYKKATGKKL
Ga0209443_11421411	3300027707	Freshwater Lake	VRIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTST
Ga0209443_11508441	3300027707	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTTTTSTNKARLDYKKATGKKLK
Ga0209297_10383576	3300027733	Freshwater Lake	MKKIFGPYKGSKANGGRPIYVFKRKKKDGTVATTSSNKARVDY
Ga0209087_12464151	3300027734	Freshwater Lake	MKKIFGPYKGSKANGGRPIYVFKRKKKDGTVATTSSNK
Ga0209085_11065125	3300027741	Freshwater Lake	MAEVKIGSRKKFGPYKGSEQNGGRPIYVWKVKTKDGWRTESKNKAREDYEQSS
Ga0209355_11864773	3300027744	Freshwater Lake	MKIFGPYKGSKQNGGRPIFVIKRKKKDGTTETTSTNKARLDYKKATGKKLT
Ga0209084_11296521	3300027749	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKA
Ga0209596_13942822	3300027754	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKAT
Ga0209500_103561984	3300027782	Freshwater Lake	MTMKSKFGPYKGSEQNGGRPIYVFKKKVAGKTVSTSSNKARVEYKEKTGKTLSKK
Ga0209246_102017631	3300027785	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVFKRKRKDGSVETTSSNKARVD
Ga0209246_103828711	3300027785	Freshwater Lake	MKTKYGPYKGSKQNGGRPIYVFKKKVKGKTVTTSS
Ga0209353_103701521	3300027798	Freshwater Lake	MKIFGPYKGSKQNGGRPIFVIKRKKKDGTTETTSTNKARLDYKKATG
Ga0209990_102339091	3300027816	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKATGKKL
Ga0255172_10292274	3300028103	Freshwater	MIKRFGPYKGSKQNGGRPIYVFKRRKKNGEVVTTSSNKARVDYEDST
Ga0304730_10988035	3300028394	Freshwater Lake	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNK
(restricted) Ga0247832_10616445	3300028557	Freshwater	MKRFGPYKGSKQNGGRPIYVFKRKKKDGTTVTTSSNKARV
Ga0119944_10401863	3300029930	Aquatic	MKRFGPYKGSKQNGGRPIYVFKRKKKDGTTVTTSSNKARVDYE
Ga0315899_111542443	3300031784	Freshwater	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARL
Ga0315900_105066904	3300031787	Freshwater	MKIFGPYKGSKQNGGRKIYVFKRKKKDGTTVTTSSNKARVDYEKRTGKTL
Ga0315900_106163403	3300031787	Freshwater	MGEVKIFGPYKGSKQNGGRPIYVIKRKKKDGSTETTSTNKARLDYKKATGKKLKR
Ga0315900_110843471	3300031787	Freshwater	MKKSIKKTIKRIFGPYKGSEQNGGRPIYVIKKRTKDGKVVTTSSNKARVDYEKAT
Ga0315909_100983287	3300031857	Freshwater	MIKRFGPYKGSKQNGGRPIYVFKRRKKNGEVVTTSSNKARVDYEDSTGETL
Ga0315909_101894374	3300031857	Freshwater	MGEVKIFGPYKGSKQNGGRPIYVIKRKKKDGSTETTSTN
Ga0315909_101948271	3300031857	Freshwater	MKKIFGPYKGSKANGGRPIYVFKRKKKDGTVVTTSSNKARVDYEEATGK
Ga0315909_102051951	3300031857	Freshwater	VKIFGPYKGSKQNGGRPIYVIKRKKKDGSTQTTSTNKARLDYKKAT
Ga0315909_106272363	3300031857	Freshwater	MGEVKIFGPYKGSKQNGGRPIYVIKRKKKDGSTETTSTNKARLDYKKATGKK
Ga0315901_111028741	3300031963	Freshwater	MKIFGPYKGSKQNGGRKIYVFKRKKKDGTTVTTSSNKARV
Ga0315906_108052934	3300032050	Freshwater	MKIFGPYKGSKQNGGRKIYVFKRKKKDGTTVTTSSNKARVDYERR
Ga0315903_105831891	3300032116	Freshwater	MFGPYEGSEQNGGRPIYVFKKKKNGKTVTTSSNKARVE
Ga0315903_108548271	3300032116	Freshwater	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKAR
Ga0315273_123625053	3300032516	Sediment	MKIFGPYKGSKQNGGRAIYVFKRKRKDGSVETTSSNKARVD
Ga0334998_0683029_2_130	3300034019	Freshwater	MIKRFGPYKGSKQNGGRPIYVFKRRKKNGEVVTTSSNKARVDY
Ga0335019_0777783_3_146	3300034066	Freshwater	MTMKSKFGPYKGSEQNGGRPIYVFKKKVAGKTVTTSSNKARVEYKEKT
Ga0335036_0879950_393_509	3300034106	Freshwater	MKIFGPYKGSKQNGGRPIYVFKRKKKDGTTTTTSSNKAR
Ga0335033_0261571_750_902	3300034117	Freshwater	MKIFGPYKGSKQNGGRPIYVIKRKKKDGTTETTSTNKARLDYKKATGKKLK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters