Metagenome Family F091357

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091357
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	49 residues
Representative Sequence	MKTSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKIRVDL
Number of Associated Samples	83
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.91 %
% of genes near scaffold ends (potentially truncated)	68.22 %
% of genes from short scaffolds (< 2000 bps)	85.98 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.047 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (19.626 % of family members)
Environment Ontology (ENVO)	Unclassified (71.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.327 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.56% β-sheet: 0.00% Coil/Unstructured: 47.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00589	Phage_integrase	24.30
PF08547	CIA30	2.80
PF01230	HIT	2.80
PF13395	HNH_4	1.87
PF12911	OppC_N	0.93
PF00486	Trans_reg_C	0.93
PF13561	adh_short_C2	0.93
PF00583	Acetyltransf_1	0.93
PF14099	Polysacc_lyase	0.93
PF05154	TM2	0.93
PF01527	HTH_Tnp_1	0.93
PF16901	DAO_C	0.93
PF12833	HTH_18	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2314	Uncharacterized membrane protein YozV, TM2 domain, contains pTyr	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.98 %
Unclassified	root	N/A	14.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.05 %
Unclassified	root	N/A	14.02 %
Viruses	superkingdom	All Organisms → Viruses	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.05 %
Unclassified	root	N/A	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	77.57 %
Unclassified	root	N/A	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	49.53 %
Unclassified	root	N/A	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	26.17 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	22.43 %
Unclassified	root	N/A	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	26.17 %
Unclassified	root	N/A	14.02 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	13.08 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	7.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	26.17 %
Unclassified	root	N/A	14.02 %
Sulfitobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter	3.74 %
Roseobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter	3.74 %
Rhodobaca	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodobaca	0.93 %
Planktomarina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina	0.93 %
Aliiroseovarius	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Aliiroseovarius	0.93 %
Cognatishimia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cognatishimia	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	26.17 %
Unclassified	root	N/A	14.02 %
Sulfitobacter mediterraneus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → Sulfitobacter mediterraneus	3.74 %
unclassified Roseobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter	3.74 %
Rhodobaca barguzinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodobaca → Rhodobaca barguzinensis	0.93 %
Cognatishimia maritima	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cognatishimia → Cognatishimia maritima	0.93 %
Planktomarina temperata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata	0.93 %
Aliiroseovarius	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Aliiroseovarius	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	26.17 %
Unclassified	root	N/A	14.02 %
Sulfitobacter mediterraneus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → Sulfitobacter mediterraneus	3.74 %
Roseobacter sp. LE17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	2.80 %
Planktomarina temperata RCA23	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata → Planktomarina temperata RCA23	0.93 %
Roseobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	0.93 %
Rhodobaca barguzinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodobaca → Rhodobaca barguzinensis	0.93 %
Cognatishimia maritima	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cognatishimia → Cognatishimia maritima	0.93 %
Aliiroseovarius	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Aliiroseovarius	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10260101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	524	Open in IMG/M
3300000928\|OpTDRAFT_10223035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	932	Open in IMG/M
3300001344\|JGI20152J14361_10104878	Not Available	558	Open in IMG/M
3300001347\|JGI20156J14371_10073196	All Organisms → cellular organisms → Bacteria → Proteobacteria	1252	Open in IMG/M
3300001348\|JGI20154J14316_10063728	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300001348\|JGI20154J14316_10193443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	504	Open in IMG/M
3300001355\|JGI20158J14315_10088329	All Organisms → cellular organisms → Bacteria → Proteobacteria	1107	Open in IMG/M
3300002136\|M2t6FKB1_1444194	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300003583\|JGI26253J51717_1014699	All Organisms → cellular organisms → Bacteria → Proteobacteria	2000	Open in IMG/M
3300004279\|Ga0066605_10049243	All Organisms → cellular organisms → Bacteria → Proteobacteria	1911	Open in IMG/M
3300004279\|Ga0066605_10207771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → Sulfitobacter mediterraneus	749	Open in IMG/M
3300004279\|Ga0066605_10290199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	604	Open in IMG/M
3300004280\|Ga0066606_10066568	All Organisms → cellular organisms → Bacteria → Proteobacteria	1402	Open in IMG/M
3300007557\|Ga0102821_1058600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	995	Open in IMG/M
3300007623\|Ga0102948_1067813	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300007623\|Ga0102948_1282334	Not Available	508	Open in IMG/M
3300008012\|Ga0075480_10640391	Not Available	500	Open in IMG/M
3300008253\|Ga0105349_10230855	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300008964\|Ga0102889_1069398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1059	Open in IMG/M
3300009071\|Ga0115566_10078285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2165	Open in IMG/M
3300009071\|Ga0115566_10736627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	545	Open in IMG/M
3300009076\|Ga0115550_1020236	All Organisms → cellular organisms → Bacteria → Proteobacteria	3182	Open in IMG/M
3300009076\|Ga0115550_1055411	All Organisms → cellular organisms → Bacteria → Proteobacteria	1603	Open in IMG/M
3300009076\|Ga0115550_1064691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1443	Open in IMG/M
3300009077\|Ga0115552_1168796	Not Available	910	Open in IMG/M
3300009193\|Ga0115551_1111571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1275	Open in IMG/M
3300009409\|Ga0114993_10692614	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300009420\|Ga0114994_10517975	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300009422\|Ga0114998_10125105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp.	1251	Open in IMG/M
3300009422\|Ga0114998_10209386	All Organisms → cellular organisms → Bacteria → Proteobacteria	925	Open in IMG/M
3300009438\|Ga0115559_1021555	All Organisms → cellular organisms → Bacteria → Proteobacteria	3176	Open in IMG/M
3300009440\|Ga0115561_1090761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1270	Open in IMG/M
3300009472\|Ga0115554_1027642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2803	Open in IMG/M
3300009472\|Ga0115554_1031628	All Organisms → cellular organisms → Bacteria → Proteobacteria	2563	Open in IMG/M
3300009495\|Ga0115571_1391648	Not Available	543	Open in IMG/M
3300009497\|Ga0115569_10165646	All Organisms → cellular organisms → Bacteria → Proteobacteria	1046	Open in IMG/M
3300009505\|Ga0115564_10210066	All Organisms → cellular organisms → Bacteria → Proteobacteria	1009	Open in IMG/M
3300009507\|Ga0115572_10098993	All Organisms → Viruses → Predicted Viral	1754	Open in IMG/M
3300009507\|Ga0115572_10675556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	564	Open in IMG/M
3300009512\|Ga0115003_10050209	All Organisms → cellular organisms → Bacteria → Proteobacteria	2647	Open in IMG/M
3300009512\|Ga0115003_10090009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1897	Open in IMG/M
3300009544\|Ga0115006_10549215	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300010883\|Ga0133547_10915068	All Organisms → cellular organisms → Bacteria → Proteobacteria	1707	Open in IMG/M
3300017697\|Ga0180120_10416137	Not Available	526	Open in IMG/M
3300017950\|Ga0181607_10045873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	3004	Open in IMG/M
3300017950\|Ga0181607_10355159	Not Available	809	Open in IMG/M
3300017967\|Ga0181590_10958054	Not Available	560	Open in IMG/M
3300017969\|Ga0181585_10050898	All Organisms → cellular organisms → Bacteria → Proteobacteria	3238	Open in IMG/M
3300018041\|Ga0181601_10435716	Not Available	694	Open in IMG/M
3300018410\|Ga0181561_10123414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1370	Open in IMG/M
3300018415\|Ga0181559_10102549	All Organisms → cellular organisms → Bacteria → Proteobacteria	1750	Open in IMG/M
3300018416\|Ga0181553_10399844	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300018876\|Ga0181564_10678070	Not Available	543	Open in IMG/M
3300020052\|Ga0181554_1198801	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300020173\|Ga0181602_10277244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	704	Open in IMG/M
3300020178\|Ga0181599_1193157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Aliiroseovarius	824	Open in IMG/M
3300020182\|Ga0206129_10185528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	937	Open in IMG/M
3300020182\|Ga0206129_10374059	Not Available	545	Open in IMG/M
3300020182\|Ga0206129_10415449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	503	Open in IMG/M
3300020187\|Ga0206130_10018952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Cognatishimia → Cognatishimia maritima	6200	Open in IMG/M
3300020187\|Ga0206130_10058797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2622	Open in IMG/M
3300020187\|Ga0206130_10101483	All Organisms → cellular organisms → Bacteria → Proteobacteria	1687	Open in IMG/M
3300020194\|Ga0181597_10158445	All Organisms → cellular organisms → Bacteria → Proteobacteria	1149	Open in IMG/M
3300020317\|Ga0211688_1061281	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300020335\|Ga0211690_1032982	All Organisms → cellular organisms → Bacteria → Proteobacteria	1255	Open in IMG/M
3300020347\|Ga0211504_1030644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1363	Open in IMG/M
3300020358\|Ga0211689_1051961	All Organisms → cellular organisms → Bacteria → Proteobacteria	1208	Open in IMG/M
3300020358\|Ga0211689_1143882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	663	Open in IMG/M
3300020358\|Ga0211689_1224044	Not Available	506	Open in IMG/M
3300020372\|Ga0211683_10154883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	736	Open in IMG/M
3300020396\|Ga0211687_10073587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Planktomarina → Planktomarina temperata → Planktomarina temperata RCA23	1483	Open in IMG/M
3300020595\|Ga0206126_10471741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	543	Open in IMG/M
3300020601\|Ga0181557_1181108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	814	Open in IMG/M
3300021365\|Ga0206123_10469748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	508	Open in IMG/M
3300021378\|Ga0213861_10338384	Not Available	759	Open in IMG/M
3300022929\|Ga0255752_10124011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1343	Open in IMG/M
3300022935\|Ga0255780_10088591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1853	Open in IMG/M
3300024348\|Ga0244776_10302457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1092	Open in IMG/M
3300025643\|Ga0209151_1145152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	609	Open in IMG/M
3300025680\|Ga0209306_1050440	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300025680\|Ga0209306_1107337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	824	Open in IMG/M
3300025690\|Ga0209505_1041859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1536	Open in IMG/M
3300025695\|Ga0209653_1064622	All Organisms → cellular organisms → Bacteria → Proteobacteria	1313	Open in IMG/M
3300025695\|Ga0209653_1217155	Not Available	511	Open in IMG/M
3300025709\|Ga0209044_1200133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → Sulfitobacter mediterraneus	565	Open in IMG/M
3300025719\|Ga0209252_1084330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1109	Open in IMG/M
3300025767\|Ga0209137_1088563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1280	Open in IMG/M
3300025816\|Ga0209193_1036477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1437	Open in IMG/M
3300025830\|Ga0209832_1066097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300025880\|Ga0209534_10152096	Not Available	1222	Open in IMG/M
3300025892\|Ga0209630_10021831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodobaca → Rhodobaca barguzinensis	4330	Open in IMG/M
3300025892\|Ga0209630_10105418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1511	Open in IMG/M
3300027687\|Ga0209710_1081715	All Organisms → cellular organisms → Bacteria → Proteobacteria	1331	Open in IMG/M
3300027687\|Ga0209710_1084961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	1293	Open in IMG/M
3300027780\|Ga0209502_10044371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2488	Open in IMG/M
3300027813\|Ga0209090_10446488	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300027833\|Ga0209092_10164484	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300027833\|Ga0209092_10634281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → Sulfitobacter mediterraneus	531	Open in IMG/M
3300027833\|Ga0209092_10662140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → Sulfitobacter mediterraneus	516	Open in IMG/M
3300027838\|Ga0209089_10313980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	890	Open in IMG/M
3300027883\|Ga0209713_10209412	All Organisms → cellular organisms → Bacteria → Proteobacteria	1313	Open in IMG/M
3300028126\|Ga0228648_1043280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	830	Open in IMG/M
3300028196\|Ga0257114_1003199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	10491	Open in IMG/M
3300028287\|Ga0257126_1144301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	796	Open in IMG/M
3300031594\|Ga0302131_1136709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter → unclassified Roseobacter → Roseobacter sp. LE17	833	Open in IMG/M
3300031626\|Ga0302121_10154257	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300031766\|Ga0315322_10074968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2460	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.20%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.87%
Unclassified	Environmental → Aquatic → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Pelagic	Environmental → Aquatic → Marine → Pelagic	27.10%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	24.30%
Oceanic	Environmental → Aquatic → Marine → Oceanic	17.76%
Unclassified	Environmental → Aquatic → Marine → Unclassified	13.08%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	9.35%
Coastal	Environmental → Aquatic → Marine → Coastal	3.74%
Inlet	Environmental → Aquatic → Marine → Inlet	1.87%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.87%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	27.10%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	17.76%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	14.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	13.08%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	9.35%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.54%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.74%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.80%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	19.63%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	17.76%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	14.95%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	12.15%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	7.48%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	7.48%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	5.61%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.80%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	1.87%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.87%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	1.87%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.93%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.93%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.93%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.93%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.93%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.93%
Marine	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300002136	M2t6FKB1 (104f)	Environmental	Open in IMG/M
3300003583	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNA	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300004280	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100m	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007623	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_A_H2O_MG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300008253	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1B Hudson Canyon	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020052	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011503CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020317	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555998-ERR599027)	Environmental	Open in IMG/M
3300020335	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX556030-ERR599035)	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300020358	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)	Environmental	Open in IMG/M
3300020372	Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)	Environmental	Open in IMG/M
3300020396	Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300020601	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025643	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_165m (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025690	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 (SPAdes)	Environmental	Open in IMG/M
3300025695	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025709	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_130m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025719	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_135m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025830	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027883	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028126	Seawater microbial communities from Monterey Bay, California, United States - 60D	Environmental	Open in IMG/M
3300028196	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031766	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_102601011	3300000116	Marine	MKTSAHGLQKKLRREQLHEIWLRKNLKSSSQHWECRKNILKLNTKIKIDHQ
OpTDRAFT_102230352	3300000928	Freshwater And Marine	MKQSAHGLQKKLRREQHHEQWLRKNLKSSTQHWECRKNILKLNTKIRIPK*
JGI20152J14361_101048782	3300001344	Pelagic Marine	MKTSVHGLQKKLCREQRHEIWLRKNLKSSKQHWECRKNILKLNTKIKI
JGI20156J14371_100731961	3300001347	Pelagic Marine	MKTSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKIRVDLQK*
JGI20154J14316_100637282	3300001348	Pelagic Marine	MKNSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLYTKLQVHEHKNEGCL*
JGI20154J14316_101934432	3300001348	Pelagic Marine	MKNSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILK
JGI20158J14315_100883292	3300001355	Pelagic Marine	MKNSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKICVDLQK*
M2t6FKB1_14441942	3300002136	Marine	MKPSVHKLQKKLKREQQHELWLRKNLESSTQHWECRKNIFKLNTAIRVDNQK*
JGI26253J51717_10146994	3300003583	Marine	MKQSAHGLQKKLRREQHHEQWLRKNLKSSTQHWECRKDILKLNAKIRILK*
Ga0066605_100492434	3300004279	Marine	FLFMKQSAHGLQKKLRREQHHEQWLRKNLKSSSQHWECRKNILKLNTKIKIDLQK*
Ga0066605_102077712	3300004279	Marine	MKTSVHGLKKKLHREQHHEQWLRKNLKRSKQHWECRKNILKLNTKIRVDLQK*
Ga0066605_102901991	3300004279	Marine	MMTSVHGLKKKLSREQQHEQWLRKNLKSSKQHWECRKNILKLNTKIRIPK*
Ga0066606_100665682	3300004280	Marine	MKQSAHGLQKKLRREQLHEIWLRKNLKSSSQHWECRKNILKLNTKIKIDLQK*
Ga0102821_10586002	3300007557	Estuarine	MKQSAHGLKKKLKKEQHHEQWLRKNLKSSTQHWECRKDILKLNAKIRILK*
Ga0102948_10678133	3300007623	Water	MKTSAHGLKKKLRREQQHELWLRKNLKSSKQHWECRKNIFKLHTEIAFGKNEPTQKPK*
Ga0102948_12823341	3300007623	Water	MKQSVHKLQKKLRREQQHELWLRKNLTSTKQHWECRKNILKLHTEIAFGQNDATQKSK*
Ga0075480_106403912	3300008012	Aqueous	MKPSVHKLQKKLRREQQHELWLRKNLKSSKQHWECRKNILKLRTEIRVD
Ga0105349_102308552	3300008253	Methane Seep Mesocosm	MKQLVHGLQKKLRREQLHEQWLRKNLKSSTQHWECRKNILKLNTKIKIDLQK*
Ga0102889_10693983	3300008964	Estuarine	MKQSVHGLKKKLRREQHHEQWLRKNLKSSTQHWECRKDILKLN
Ga0115566_100782851	3300009071	Pelagic Marine	MKPSVHKLQKKLRREQRHEQWLRKNLKSSKQHWECRKNILKLNTK
Ga0115566_107366271	3300009071	Pelagic Marine	MKNSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNT
Ga0115550_10202361	3300009076	Pelagic Marine	VYFKHMKNSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLYTKLQVHEHKNEGCL*
Ga0115550_10554114	3300009076	Pelagic Marine	MKNSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTK
Ga0115550_10646914	3300009076	Pelagic Marine	MKTSAHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTK
Ga0115552_11687961	3300009077	Pelagic Marine	MKPSVHKLQKKLRREQQHELWLRKNLKSTKQHWECRKNVLKLNTKIRVDLQK
Ga0115551_11115714	3300009193	Pelagic Marine	MKQSAHGLQKKLRREQQHEQWLRKNLKSSKQHWECRKNILKLYTKLQVH
Ga0114993_106926142	3300009409	Marine	FIFLFMKQSAHGLKKKLRREQLHEQWLRKNLKHTREHWECRKNILKLNTKIRVDHQK*
Ga0114994_105179752	3300009420	Marine	MKQSAHGLKKKLKKEQHHEQWLRKNLKSSTQHWECRKEYLKAQY*
Ga0114998_101251053	3300009422	Marine	MKQSAHGLKKKLKKEQHHEQWLRKNLKSSTQHWECRK
Ga0114998_102093861	3300009422	Marine	MKPSAHKLQKKLKKEQLHEQWLRKNLKSSSQHWECRKNILKLNTKIKIGLQK*
Ga0115559_10215551	3300009438	Pelagic Marine	RTDMKTSVHGLKKKLRREQHHELWLRKNLKSSKQHWECRKNILKLYTKLQVHEHKNEGCL
Ga0115561_10907614	3300009440	Pelagic Marine	MKQSAHGLQKKLRREQQHEQWLRKNLKSSKQHWECRKNILKLYTKLQVHE
Ga0115554_10276421	3300009472	Pelagic Marine	MKTSAHGLQKKLHREQQHEQWLRKNLKSSKQHWECRKNILKLNTKVRVDLQK*
Ga0115554_10316281	3300009472	Pelagic Marine	MKQSAHGLQKKLRREQQHEQWLRKNLKSSKQHWECRKNILKLYTKLQVHEHKNEGCL*
Ga0115571_13916481	3300009495	Pelagic Marine	MKPSVHKLRKKLKREQQHELWLRKNLKSSSQHWECRKNILKLNTKIRVD
Ga0115569_101656461	3300009497	Pelagic Marine	KCMKPSVHKLQKKLKREQQHELWLRKNLEISSQHWKCRKNILKLNTKIKIDHQK*
Ga0115564_102100661	3300009505	Pelagic Marine	KKKLRREQHHEQWLRKNLKSSKQHWECRKDILKLNTKIRVDLRK*
Ga0115572_100989933	3300009507	Pelagic Marine	MKPSVHKLQKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLN
Ga0115572_106755561	3300009507	Pelagic Marine	KTLVHGLKKKLRREQQHEHWLRKNLKRSKQHWECRKDILKLNTKIRIPK*
Ga0115003_100502091	3300009512	Marine	KKLKKEQLHEQWLRKNLKSSSQHWECRKNILKLNTKIKIGLQK*
Ga0115003_100900093	3300009512	Marine	MKQSAHGLKKKLKKEQHHEQWLRKNLKSSTQHWECRKNILKLNTKIRVDLQK*
Ga0115006_105492152	3300009544	Marine	MKTSAHGLQKKLKREQQHEIWLRKNLKSSTQHWKCRKNILKLNTKIKIDLQK*
Ga0133547_109150681	3300010883	Marine	YFLHMKQSVHGLKKKLRREQLHEIWLRKNIKSSAQHWECRKNILKLNTKIRVDPQK*
Ga0180120_104161371	3300017697	Freshwater To Marine Saline Gradient	MKPSVHKLQKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKI
Ga0181607_100458734	3300017950	Salt Marsh	SVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKIRVDLQK
Ga0181607_103551591	3300017950	Salt Marsh	MKPSVHKLQKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKIR
Ga0181590_109580541	3300017967	Salt Marsh	MKPSVHKLQKKLRREQQYELWLRKNLKSSKQYWECRKNILKLRTEIQLCAAQH
Ga0181585_100508983	3300017969	Salt Marsh	MKQSVHKLQKKLRREQQHELWLRKNLKSTKQHWECRKNIFKLRTEIRADHQTQ
Ga0181601_104357162	3300018041	Salt Marsh	MKPSVHKLQKKLRREQQHELWLRKNLKSTQQHWECRKNVLKLRTEIRVNQ
Ga0181561_101234143	3300018410	Salt Marsh	MKHSVHKLQKKLRREQQHELWLRKNLKSTKQHWECSKNILKLHTEIAFGKNEPTQKP
Ga0181559_101025491	3300018415	Salt Marsh	MKTSVHGLQKKLRREQHHEIWLRKNLKSSSQHWECRKNILKLNTKLQVHEYKN
Ga0181553_103998441	3300018416	Salt Marsh	HGLQKKLRREQLHEIWLRKNLKSSSQHWECRKNILKLNTKIKIDHQK
Ga0181564_106780702	3300018876	Salt Marsh	MKPSVHKLQKKLRREQQHELWLRKNLKSTKQHWECSKNILKLHTEI
Ga0181554_11988011	3300020052	Salt Marsh	MQLNCMKHSVHKLQKKLRREQQHELWLRKNLKSTKQHWECSKNILKLHTEIAFGKNEPTQKPK
Ga0181602_102772443	3300020173	Salt Marsh	MKTSAHGLQKKLRREQLHEIWLRKNLKSSKQHWECRKNILKLNTKIRVDLQK
Ga0181599_11931571	3300020178	Salt Marsh	MKPSVHKLQKKLRREQQHELWLRKNLKSTKQHWECRKNIFKLHTEIAF
Ga0206129_101855281	3300020182	Seawater	NSVHGLKKKLRREQHHEQWLRKNLKRSKQHWECRKNILKLITEIRVDQK
Ga0206129_103740591	3300020182	Seawater	MKPSVHKLQKKLRREQQHELWLRKNLKSSKQHWECRKNILKLNTKIRADLQK
Ga0206129_104154492	3300020182	Seawater	HGLKKKLLREQKHEQWLRKNLKSSKQHWECRKNIFKLNTKIRIPK
Ga0206130_100189522	3300020187	Seawater	MKTSAHGLQKKLKREQLHEQWLRKNLKSSTQHWECRKNILKLNTKIKIDLQK
Ga0206130_100587974	3300020187	Seawater	MKQSAHGLKKKLRREQLHEIWLRKNLKSSSQHWECRKNILKLNTKIRVGQS
Ga0206130_101014832	3300020187	Seawater	MKPSAHKLQKKLKKEQQHELWLRKNLKSSSQHWECRKNILKLNTKIKIDLQK
Ga0181597_101584451	3300020194	Salt Marsh	MKTSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKL
Ga0211688_10612812	3300020317	Marine	MKQSAHGLKKKLKREQQHEIWLRKNLKSSTQHWACRKNILKLNTKIRVDLKK
Ga0211690_10329823	3300020335	Marine	MKQSAHGLKKKLKREPQHEIWLRKNLKSSTQHWACRKNILKLNTKIKIDLQK
Ga0211504_10306441	3300020347	Marine	MKTSVHGLKKKLLREQKHEQWLRKNLKSSKQHWECRK
Ga0211689_10519614	3300020358	Marine	KLRREQQHEIWLRKNLKSSTQHWECRKNILKLSTKIRVDLKK
Ga0211689_11438823	3300020358	Marine	FLFMKQSAHGLQKKLRREQGHEQWLRKNLKASSQHWECRKNILKLNTKIRVGQS
Ga0211689_12240441	3300020358	Marine	MKQSAHGLKKKLKREQQHEIWLHKNLKSSTQHWACRKNILKLNTKIKIDLQK
Ga0211683_101548832	3300020372	Marine	MKLSIHKLTKQLEREKQHKQWLEKNLKHSRQHWECRKNILKLNTKIK
Ga0211687_100735871	3300020396	Marine	MKQSAHGLKKKLKREQQHEIWLRKNLKSSTQHWACRKNILKLNTKIKIDLQK
Ga0206126_104717411	3300020595	Seawater	MKNSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKLQVHEYK
Ga0181557_11811081	3300020601	Salt Marsh	LKKKLSREQQHEQWLRKNLKSSKQHWECRKNILKLNTKIRIP
Ga0206123_104697482	3300021365	Seawater	MKQSAHGLQKKLRREQQHEQWLRKNLKSSKQHWECRKNILKLYTKLQVHEHKNEGCL
Ga0213861_103383841	3300021378	Seawater	MKTSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKIRVDL
Ga0255752_101240111	3300022929	Salt Marsh	MKHSVHKLQKKLRREQQHELWLRKNLKSTKQHWECSKNILKLHT
Ga0255780_100885913	3300022935	Salt Marsh	MKPSVHKLQKKLRREQQHELWLRKNLKSTKQHWECRKNILKLRTEIQLCAAQH
Ga0244776_103024571	3300024348	Estuarine	MKQSAHGLQKKLRREQHHEQWLRKNLKSSTQHWECRKDILKLNAKIR
Ga0209151_11451521	3300025643	Marine	MKQSVHGLKKKLRREQLHEQWLRKNLKASSQQWECRK
Ga0209306_10504403	3300025680	Pelagic Marine	NSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKLQVHEYKNEGCL
Ga0209306_11073373	3300025680	Pelagic Marine	MKNSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKICVD
Ga0209505_10418591	3300025690	Pelagic Marine	MKTSAHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKN
Ga0209653_10646221	3300025695	Marine	MKTSVHGLKKKLHREQHHEQWLRKNLKRSKQHWECRKNILKLNTKIRVDHQK
Ga0209653_12171551	3300025695	Marine	MKPSVHKLQKKLLREQQHELWLRKNLKSTKQHWECRKNIL
Ga0209044_12001331	3300025709	Marine	KQSVHGLKKKLRREQLHEQWLRKNLKASSQHWEYRKNILKLNTKIKIDLQK
Ga0209252_10843302	3300025719	Marine	MKQSVHGLKKKLRREQLHEQWLRKNLKASSQHWEYRKNILKLNTKIKIDLQK
Ga0209137_10885631	3300025767	Marine	MKQSVHGLKKKLRREQHHEQWLRKNLKSSTQHWECRKDILKLNAKIRILK
Ga0209193_10364771	3300025816	Pelagic Marine	MKNSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNIL
Ga0209832_10660971	3300025830	Pelagic Marine	MKTSVHGLKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLN
Ga0209534_101520961	3300025880	Pelagic Marine	MKPSVHKLQKKLRREQRHEQWLRKNLKSSKQHWECRKNILKLNTKIRVDL
Ga0209630_100218319	3300025892	Pelagic Marine	LKKKLRREQHHEQWLRKNLKSSKQHWECRKNILKLNTKICVDLQK
Ga0209630_101054181	3300025892	Pelagic Marine	MKPSVHKLEKKLHREQQHEQWLLKNLKSSKQYWECRKNILK
Ga0209710_10817152	3300027687	Marine	MKPSAHKLQKKLKKEQLHEQWLRKNLKSSSQHWECRKNILKLNTKIKIGLQK
Ga0209710_10849611	3300027687	Marine	MKQSAHGLKKKLKKEQHHEQWLRKNLKSSTQHWECRKNILKLNTKIRVDHQK
Ga0209502_100443713	3300027780	Marine	MKQSAHGLKKKLKKEQHHEQWLRKNLKSSTQHWECRKNILKLNTKIRVDLQK
Ga0209090_104464881	3300027813	Marine	MKQSAHGLKKKLKKEQHHEQWLRKNLKSSTQHWECRKNILKLN
Ga0209092_101644843	3300027833	Marine	MKQSAHGLQKKLRREQLHEQWLRKNLKSSTQHWECRKNILKLNTKIRVGQS
Ga0209092_106342811	3300027833	Marine	LQKKLKKEQQHELWLRKNLKSSSQHWECRKNILKLNTKIKIDLQK
Ga0209092_106621401	3300027833	Marine	AHGLKKKLKKEQHHEQWLRKNLKSSSQHWECRKYILKLNTKIKIDLQK
Ga0209089_103139801	3300027838	Marine	MKLSIHKLTKQLEREKQHKQWLEKNLKHSRQHWECRKNILKLNTKILVD
Ga0209713_102094121	3300027883	Marine	MKTSAHGLQKKLKREQQHEIWLRKNLKSSTQHWKCRKNILKLNTKIKIDLQK
Ga0228648_10432801	3300028126	Seawater	MKTSVHGLKKKLHREQHHEQWLRKNLKRSKQHWECRKNILKLNTKIRIPKY
Ga0257114_10031991	3300028196	Marine	LYFLFMKQSAHGLQKKLRREQHHEQWLRKNLKSSTQHWECRKDILKLNAKIRILK
Ga0257126_11443011	3300028287	Marine	MKQSAHGLQKKLRREQHHEQWLRKNLKSSTQHWECRKDIL
Ga0302131_11367091	3300031594	Marine	GLQKKLRREQHHEQWLRKNLKSSTQHWECRKDILKLNAKIRILK
Ga0302121_101542571	3300031626	Marine	MKQSAHGLKKKLKKEQHHEQWLRKNLKSSSQHWECRKNILKLNTKIKID
Ga0315322_100749682	3300031766	Seawater	MKQSVHGLKKKLRREQLHEQWLRKNLKASSQHWECRKNILKLNTKIKIDLQK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091357

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences