Metagenome / Metatranscriptome Family F091339

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091339
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	63 residues
Representative Sequence	MDNTERQSFLGNGYRLDLVSVPGVIVLCREDGTEVARFSVWDATSKAIEQAAQEDRRTNQKV
Number of Associated Samples	36
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.83 %
% of genes near scaffold ends (potentially truncated)	16.82 %
% of genes from short scaffolds (< 2000 bps)	84.11 %
Associated GOLD sequencing projects	35
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (47.664 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (61.682 % of family members)
Environment Ontology (ENVO)	Unclassified (62.617 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.290 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.78% β-sheet: 20.00% Coil/Unstructured: 62.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF09954	DUF2188	5.61
PF01844	HNH	2.80
PF13417	GST_N_3	1.87
PF00043	GST_C	1.87
PF00353	HemolysinCabind	1.87
PF13649	Methyltransf_25	0.93
PF00578	AhpC-TSA	0.93
PF07366	SnoaL	0.93
PF08592	Anthrone_oxy	0.93
PF04185	Phosphoesterase	0.93
PF08447	PAS_3	0.93
PF00583	Acetyltransf_1	0.93
PF13280	WYL	0.93
PF13546	DDE_5	0.93
PF13416	SBP_bac_8	0.93
PF00027	cNMP_binding	0.93
PF13602	ADH_zinc_N_2	0.93
PF14659	Phage_int_SAM_3	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	1.87
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	1.87
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
cellular organisms	root	All Organisms → cellular organisms	38.32 %
Viruses	superkingdom	All Organisms → Viruses	14.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	28.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.02 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	20.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.02 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	20.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.02 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.93 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	20.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.02 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.02 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	9.35 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	1.87 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.02 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	9.35 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1.87 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10944795	Not Available	547	Open in IMG/M
3300005562\|Ga0058697_10171576	Not Available	963	Open in IMG/M
3300005562\|Ga0058697_10530026	Not Available	605	Open in IMG/M
3300007790\|Ga0105679_10072675	All Organisms → Viruses → Predicted Viral	1111	Open in IMG/M
3300007790\|Ga0105679_10152135	All Organisms → Viruses → Predicted Viral	1779	Open in IMG/M
3300007790\|Ga0105679_10293418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1033	Open in IMG/M
3300007790\|Ga0105679_10499275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1068	Open in IMG/M
3300007790\|Ga0105679_10621055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2205	Open in IMG/M
3300007790\|Ga0105679_10655125	All Organisms → Viruses → Predicted Viral	1418	Open in IMG/M
3300007790\|Ga0105679_10693476	Not Available	1795	Open in IMG/M
3300007790\|Ga0105679_10730368	Not Available	1135	Open in IMG/M
3300007790\|Ga0105679_10760743	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300009789\|Ga0126307_10005504	All Organisms → cellular organisms → Bacteria	8875	Open in IMG/M
3300009789\|Ga0126307_10025291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	4527	Open in IMG/M
3300009789\|Ga0126307_10031734	All Organisms → cellular organisms → Bacteria	4066	Open in IMG/M
3300009789\|Ga0126307_10033507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	3964	Open in IMG/M
3300009789\|Ga0126307_10067611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2808	Open in IMG/M
3300009789\|Ga0126307_10078874	All Organisms → Viruses → Predicted Viral	2598	Open in IMG/M
3300009789\|Ga0126307_10220097	All Organisms → Viruses → Predicted Viral	1524	Open in IMG/M
3300009789\|Ga0126307_10427771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1068	Open in IMG/M
3300009789\|Ga0126307_10624140	Not Available	870	Open in IMG/M
3300009789\|Ga0126307_10626823	Not Available	868	Open in IMG/M
3300009789\|Ga0126307_10969443	Not Available	687	Open in IMG/M
3300009789\|Ga0126307_11456943	Not Available	555	Open in IMG/M
3300009840\|Ga0126313_10004086	All Organisms → cellular organisms → Bacteria	8548	Open in IMG/M
3300009840\|Ga0126313_10022799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	4187	Open in IMG/M
3300009840\|Ga0126313_10083662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2318	Open in IMG/M
3300009840\|Ga0126313_10299990	All Organisms → Viruses → Predicted Viral	1256	Open in IMG/M
3300009840\|Ga0126313_10612417	Not Available	878	Open in IMG/M
3300009840\|Ga0126313_10692697	Not Available	825	Open in IMG/M
3300009840\|Ga0126313_11120572	Not Available	647	Open in IMG/M
3300009840\|Ga0126313_11565696	Not Available	548	Open in IMG/M
3300010036\|Ga0126305_10004385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6697	Open in IMG/M
3300010036\|Ga0126305_10047821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2413	Open in IMG/M
3300010036\|Ga0126305_10274892	Not Available	1088	Open in IMG/M
3300010036\|Ga0126305_10508878	Not Available	803	Open in IMG/M
3300010036\|Ga0126305_10926000	Not Available	596	Open in IMG/M
3300010036\|Ga0126305_11272214	Not Available	508	Open in IMG/M
3300010037\|Ga0126304_10122626	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1662	Open in IMG/M
3300010037\|Ga0126304_10188941	All Organisms → Viruses → Predicted Viral	1344	Open in IMG/M
3300010037\|Ga0126304_10731447	Not Available	669	Open in IMG/M
3300010038\|Ga0126315_10093933	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300010038\|Ga0126315_10125972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1497	Open in IMG/M
3300010039\|Ga0126309_10009195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4002	Open in IMG/M
3300010039\|Ga0126309_10245467	Not Available	1012	Open in IMG/M
3300010039\|Ga0126309_10263820	Not Available	981	Open in IMG/M
3300010039\|Ga0126309_10331002	Not Available	890	Open in IMG/M
3300010040\|Ga0126308_10178849	All Organisms → Viruses → Predicted Viral	1354	Open in IMG/M
3300010040\|Ga0126308_10193012	All Organisms → Viruses → Predicted Viral	1306	Open in IMG/M
3300010040\|Ga0126308_10193834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1303	Open in IMG/M
3300010040\|Ga0126308_10436218	Not Available	878	Open in IMG/M
3300010040\|Ga0126308_10444061	Not Available	870	Open in IMG/M
3300010040\|Ga0126308_10482449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	836	Open in IMG/M
3300010040\|Ga0126308_10538534	Not Available	792	Open in IMG/M
3300010040\|Ga0126308_10636627	Not Available	729	Open in IMG/M
3300010041\|Ga0126312_10160896	All Organisms → Viruses → Predicted Viral	1561	Open in IMG/M
3300010041\|Ga0126312_10880962	Not Available	652	Open in IMG/M
3300010042\|Ga0126314_10168430	All Organisms → Viruses → Predicted Viral	1534	Open in IMG/M
3300010042\|Ga0126314_10260931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1231	Open in IMG/M
3300010042\|Ga0126314_10367250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1034	Open in IMG/M
3300010042\|Ga0126314_10959618	Not Available	634	Open in IMG/M
3300010044\|Ga0126310_10033874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2704	Open in IMG/M
3300010044\|Ga0126310_10046798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2378	Open in IMG/M
3300010044\|Ga0126310_10136747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1541	Open in IMG/M
3300010044\|Ga0126310_10231352	All Organisms → Viruses → Predicted Viral	1235	Open in IMG/M
3300010044\|Ga0126310_10251801	All Organisms → Viruses → Predicted Viral	1192	Open in IMG/M
3300010044\|Ga0126310_10411501	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300010044\|Ga0126310_11234478	Not Available	601	Open in IMG/M
3300010044\|Ga0126310_11264191	Not Available	595	Open in IMG/M
3300010044\|Ga0126310_11345531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	579	Open in IMG/M
3300010045\|Ga0126311_10599387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	872	Open in IMG/M
3300010045\|Ga0126311_11162480	Not Available	637	Open in IMG/M
3300010045\|Ga0126311_11392322	Not Available	585	Open in IMG/M
3300010166\|Ga0126306_10097019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2124	Open in IMG/M
3300010166\|Ga0126306_10121618	Not Available	1911	Open in IMG/M
3300010166\|Ga0126306_10127233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1871	Open in IMG/M
3300010166\|Ga0126306_10133987	All Organisms → Viruses → Predicted Viral	1827	Open in IMG/M
3300010166\|Ga0126306_11642987	Not Available	536	Open in IMG/M
3300012681\|Ga0136613_10493203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	663	Open in IMG/M
3300012939\|Ga0162650_100014887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	1060	Open in IMG/M
3300014325\|Ga0163163_12251838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300014487\|Ga0182000_10175812	Not Available	798	Open in IMG/M
3300014487\|Ga0182000_10179112	Not Available	794	Open in IMG/M
3300014487\|Ga0182000_10307731	Not Available	663	Open in IMG/M
3300018432\|Ga0190275_10037233	All Organisms → cellular organisms → Bacteria	3960	Open in IMG/M
3300018465\|Ga0190269_11131047	Not Available	607	Open in IMG/M
3300018466\|Ga0190268_10329601	Not Available	936	Open in IMG/M
3300018466\|Ga0190268_11981282	Not Available	534	Open in IMG/M
3300018933\|Ga0193614_1164357	Not Available	605	Open in IMG/M
3300018933\|Ga0193614_1173392	Not Available	586	Open in IMG/M
3300019767\|Ga0190267_10025967	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300019767\|Ga0190267_10393772	Not Available	769	Open in IMG/M
3300019767\|Ga0190267_10503848	Not Available	717	Open in IMG/M
3300019767\|Ga0190267_10542973	Not Available	701	Open in IMG/M
3300028705\|Ga0307276_10080853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	764	Open in IMG/M
3300028754\|Ga0307297_10277437	Not Available	601	Open in IMG/M
3300030496\|Ga0268240_10007040	All Organisms → Viruses → Predicted Viral	1774	Open in IMG/M
3300031091\|Ga0308201_10363766	Not Available	534	Open in IMG/M
3300031548\|Ga0307408_100172961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1726	Open in IMG/M
3300031731\|Ga0307405_11675282	Not Available	563	Open in IMG/M
3300031903\|Ga0307407_11661420	Not Available	508	Open in IMG/M
3300031995\|Ga0307409_102883688	Not Available	508	Open in IMG/M
3300032002\|Ga0307416_103087381	Not Available	557	Open in IMG/M
3300032159\|Ga0268251_10027034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1751	Open in IMG/M
3300032159\|Ga0268251_10429826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300034131\|Ga0334911_021645	Not Available	887	Open in IMG/M
3300034132\|Ga0334915_042069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	915	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.65%
Host-Associated	Host-Associated	9.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.72%
Plants	Host-Associated → Plants	9.35%
Aquatic	Environmental → Aquatic	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.67%
Phylloplane	Host-Associated → Plants → Phylloplane	3.74%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.64%
Sand	Environmental → Terrestrial → Soil → Sand	10.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.74%
Ice	Environmental → Aquatic → Freshwater → Ice	0.93%
Loam	Environmental → Terrestrial → Soil → Loam	0.93%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	75.70%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	10.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.67%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.93%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	61.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.28%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	8.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.74%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.74%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.87%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.93%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.93%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_109447952	3300001686	Soil	DRDDERPLLGNGYYLDLVNHFGLIVLCRDDGVEVARFSVWDATSEAIEQAAREDRRREREA*
Ga0058697_101715762	3300005562	Agave	MDHTNERSLLGNGYHLDLMRASGKVVLCREDGTEVARFSIREATARAIEQAAQEYQGGIRLG*
Ga0058697_105300262	3300005562	Agave	MDNIERQSFLGNGYRLDLVSVHGVTMLRREDGTEVARLSVWDATSQAIEEAAQEEGYH*
Ga0105679_100726752	3300007790	Soil	MDNNREQPLLGNGYHLDLVNNFGLIVLCRDDGTEVAKFSVWDATSEAIERAAREDQSKNQQA*
Ga0105679_101521352	3300007790	Soil	MNGNQHQSLLGNGYYLDLVNNSGLIVLCREDGTEVAKFTVWDATSEAIEQAAREDQSENQQA*
Ga0105679_102934181	3300007790	Soil	MDRNEERPLLGNGYYLDLVNHFGLIVLCRDDGTEVAKFSVWDATSEAIEREAREDRRRI
Ga0105679_104992751	3300007790	Soil	MDGNRHQSLLGNGYYLDLVNSSGLIVLCREDGTEVAKFTVWDATSEAIERAARKDQSENQQA*
Ga0105679_106210555	3300007790	Soil	MAGDHGKQSLLGNGHRLDLVSVPGVVVLRTDEGSEVATFRVCDATSKVVEQAAPEHQRTNQKVQGLLTGM*
Ga0105679_106551251	3300007790	Soil	MGYGMENTEEQSFLGHVYRLDLVTDPSVIVLRREDGTEVARFRVRDATTQTIEQAAHEDRRKKQKV*
Ga0105679_106934762	3300007790	Soil	VDDEGEQSFLGKGYHLDLVSVPSVVVLRREDGTEVARFSVWDATSKAIEQAAQQDQRKKDIWKR*
Ga0105679_107303681	3300007790	Soil	MDRNEERPLLGNGYYLDLVNRFGLIVLCRDDGTEVAKFSVWDATSEAIERKAREDLHKNRRS*
Ga0105679_107607432	3300007790	Soil	MDVNRQQSLLGNGYYLDLVNNSGLIVLCREDGTGVAKFTLWDATSEASERAAREDYRNNQQA*
Ga0126307_100055044	3300009789	Serpentine Soil	MEHNGGRPLLGNGYYLDLVNPYGLIVLCRDDGTEVAKFSVWDATSEAIERAAREDLRGEQDV*
Ga0126307_100252912	3300009789	Serpentine Soil	MDNNQGQSLLGNGYRLDLVSVPGTVVLRREDGIEVARFSVRDATSRAIEQAAHEDQRRYQKV*
Ga0126307_100317347	3300009789	Serpentine Soil	MDNTERQSFLGNGYRLDLVSVPGVIVLCREDGTEVARFSVWDATSKAIEQAAQEDQHTNQRV*
Ga0126307_100335071	3300009789	Serpentine Soil	MDDTERQSFLGNGYRLDLVSVPGVTVLRRDDGTEVARFSVWEATSEAIEQAAHEDQRTNQRE*
Ga0126307_100676113	3300009789	Serpentine Soil	MRSPPSGYSVRGMEHEEERPLLGNGYYLDLVNHFGLIVLCRDDGTEVARFSVWDATSEAIERAAREDLRRIRQG*
Ga0126307_100788741	3300009789	Serpentine Soil	MDDNERQSFLGKGYRLDLVSVPGVTVLRREDGTEVTRFSVWDATSKAIEQAAQEDQRRNHKV*
Ga0126307_102200972	3300009789	Serpentine Soil	MNRNEERPLLGNGYYLDLVNHFGPILLCRDDGTEVAEFSVWDDATSEAIERAAREDQSKNQQE*
Ga0126307_104277712	3300009789	Serpentine Soil	MEHEEERPLLGNGYYLDLVNAFGLIVLCRDDGTEVTRFSVWDATSQAIERAAREDLRRTQQR*
Ga0126307_106241401	3300009789	Serpentine Soil	MADDHGRQSLLGNGYRLDLVSVNGVVVLRTEDGSEVARFSVCDATSKVVEQAAQEHQSTIEKV*
Ga0126307_106268232	3300009789	Serpentine Soil	MDNIERQSFLGNGYRLDLVSVHSVIVLRRDDGTEVTRFRVRDATSQAIEQAAQEDQRTNQKV*
Ga0126307_109694432	3300009789	Serpentine Soil	MENTEEQSFLGHGYRLDLVTDPSVMVLRRADGTEVARFRVRDATSQAIEQAAHEDQRTNQKV*
Ga0126307_114569431	3300009789	Serpentine Soil	MDGNRHQSLLGNGYYLDLVNNCGLIVLCREDGTEVAKFSVWDATSEAIERTVREDQSNSQQA*
Ga0126313_1000408610	3300009840	Serpentine Soil	MEHKEERSLLGNGYYLDLVNAFGLIVLCRDDGTEVTRFSVWDATSQAIERAAREDLRRTQQR*
Ga0126313_100227991	3300009840	Serpentine Soil	MDDTERRSFLGNGYRLDLVSVPGVTVLRRDDGTEVARFSVWEATSEAIEQAAHEDQRTNQRE*
Ga0126313_100836622	3300009840	Serpentine Soil	LLGNGYRLDLVSVPGATLLRGEDGTEVARFSVWDATSKAIEQAAQEDRRTNQLV*
Ga0126313_102999902	3300009840	Serpentine Soil	MDSNQEQPLLGNGYYLDLVNNSGLIVLCREDGTEVAKFSVWDATGEALERAAREDQSKNQQA*
Ga0126313_106124172	3300009840	Serpentine Soil	MDANQQRSLLGNGYRLDLVSVPNSIVLRREDGTEVTRFSIWDATSETIERAAQEDLRNNREA*
Ga0126313_106926971	3300009840	Serpentine Soil	MDDIERQSLLGNGYRLDLVSALGATVLRREDGTEVARFSVWDATSQPIEQAAQEDWRTIQNQKA*
Ga0126313_111205722	3300009840	Serpentine Soil	MDNIERQSFLGNGYRLDLVSVHGVIMLRREDGTEVARFSVWDATSQAIEEAAQEDQRTNQKV*
Ga0126313_115656961	3300009840	Serpentine Soil	MDGNEGQTLLGNGYYLDLVNNLGVIVLRKDDGTEVARFSVWDATSTAIEQAAKADQRRNQKV*
Ga0126305_100043859	3300010036	Serpentine Soil	MEHEEERPLLGNGYYLDLVNHFGLIVLCRDDGTEVARFSVWDATSEAIERAAREDLRRIRQG*
Ga0126305_100478211	3300010036	Serpentine Soil	MADDYGKQSLLGNGYRLDLVSVPGVVVLRTEDGSEVARFSVCDATSEVVEQAAQEHQLTNQKV*
Ga0126305_102748922	3300010036	Serpentine Soil	MDGNRHQSLLGNGYYLDLVNNSGLIVLCREDGTEVAQFSVWDATSEAIERAAREDQSKNQQE*
Ga0126305_105088781	3300010036	Serpentine Soil	MDITERESFLGNGYRLDLVSVPGATVLRREDGTEVARFSVWDATSQAIEQAAQEDLRTNQNQKV*
Ga0126305_109260001	3300010036	Serpentine Soil	MDNIERQSFLGNRYRLDLVSVHGVIMLRREDGTEVARFSVWDATSQAIEEAAQEDQRTNQKV*
Ga0126305_112722141	3300010036	Serpentine Soil	GMDGNRHQSLLGNGYYLDLVNNCGLIVLCREDGTEVAKFSVWDATSEAIERTVREDQSNSQQA*
Ga0126304_101226261	3300010037	Serpentine Soil	MDNTERQSFLGNGYRLDLVSVPGVIVLCREDGTEVARFSVWDATSKAIEQAAQEDRRTNQKV*
Ga0126304_101889411	3300010037	Serpentine Soil	RQSFLGNGYRLDLVSVPGVIVLCREDGTEVARFSVWDATSKAIEQAAQEDQHTNQRV*
Ga0126304_107314471	3300010037	Serpentine Soil	GHEASGMDHTEGRSLLGNGYRLDLVSVPGVIVLRREDGTEVARFSVWDATSKAIEQAAQEDRRTIQNQKA*
Ga0126315_100939333	3300010038	Serpentine Soil	VASSEVLGKGMDDTERRSFLGNGYRLDLVSVPGVTVLRRDDGTEVARFSVWEATSEAIEQAAHEDQRTNQRE*
Ga0126315_101259721	3300010038	Serpentine Soil	MEHKEERSLLGNGYYLDLVNAFGLIVLCRVDGTEVTRFSVWDATSQAIERAAREDLRRI
Ga0126309_100091954	3300010039	Serpentine Soil	MENTKEQSFLGHGYRLDLVSDPSVIVLRREDGTEVARFKVRDATSQAIEQAAYEDQRKKQKV*
Ga0126309_102454671	3300010039	Serpentine Soil	MDVNEGHSLLGNGYYLDLVNSFGLIVLRRDDGTEVARFSIWDATSTAIEQAAQEDQRRKKL*
Ga0126309_102638202	3300010039	Serpentine Soil	MDGNEERSLLGNGYYLDLVNRFGLIVLCRDDGTEVAKFSVWDATSEAIERAAREDQRREREA*
Ga0126309_103310022	3300010039	Serpentine Soil	LLGNGYRLDLVSVPGATLLRGEDGTEVARFSVWDATSKAIEQAAQEDRRTNQNQKV*
Ga0126308_101788492	3300010040	Serpentine Soil	MDNNQGQSLLGNGYRLDLVSVPGTVVLRREDGTEVARFSVRDATSRAIEQAAQEDQRRYQKV*
Ga0126308_101930123	3300010040	Serpentine Soil	MDGNRHQSLLGNGYYLDLVNNSGLIVLCREDGTEVAQFSVWDATSEAIERTAREDQSENQQA*
Ga0126308_101938341	3300010040	Serpentine Soil	MEHKEERSLLGNGYYLDLVNAFGLIVLCRDDGTEVARFSVWDATSEATEREAREDLRRIRQG*
Ga0126308_104362182	3300010040	Serpentine Soil	MDNDEGQSFLGNGYRLDLVRVPGVIVLCKDDGTEVARFSLWDATSTAIEQAAKADQRRNQKV*
Ga0126308_104440611	3300010040	Serpentine Soil	MEHKKGQPLLGNGYYLDLVNRFGMIVLCRDDGTEVAKFSVWDATSEAIERAAREDLRKEREA*
Ga0126308_104824491	3300010040	Serpentine Soil	TEGRSLLGNGYRLDLVSVPGATLLRREDGTEVARFSIWDATGEAIEQAAQEDRRTNQLV*
Ga0126308_105385341	3300010040	Serpentine Soil	DHTEGRSLLGNGYRLDLVSVPNSIVLCREDGTEVTRFSIWDATSETIERAAREDLRNNREA*
Ga0126308_106366271	3300010040	Serpentine Soil	MDHNEGRSLLGNGYRLDLVRVSGKIVLCREDGTVVARFSMREATARTLEQTAHEDRRRKNREA*
Ga0126312_101608961	3300010041	Serpentine Soil	MDDNERQSFLGKGYRLDLVSVPGVTVLRREDGTEVARFSVWDATSKAIEQAAQEDQRRNHRV*
Ga0126312_108809621	3300010041	Serpentine Soil	MDDNEGQSFLGNGYRLDLVSVPGVTVLRREDGTEVARFSVWDATSQAIEKAAKEDWRTNQNQKV*
Ga0126314_101684301	3300010042	Serpentine Soil	MDNIERQSFLGNGYRLDLVSVHSVIVLRRDDGTEVTRFSVRDATSQAIEQAAQEDQRTNQKV*
Ga0126314_102609312	3300010042	Serpentine Soil	MDANQQRSLLGNGYHLDLVSNHGWIVLRRDDGTEVAEFSVWDATSEAIERTAREDLRREREA*
Ga0126314_103672502	3300010042	Serpentine Soil	MEHKKGQSLLGNGYYLDLVNRFGMIVLCRDDGTEVAKFSVWDATSEAIERAAREDLRKEREA*
Ga0126314_109596181	3300010042	Serpentine Soil	MDSNEEKSLLGNGYYLDLVNNSAFIVLCRDDGTEVAKFSVWEATSQAIEQAAQEDQHTNQRV*
Ga0126310_100338746	3300010044	Serpentine Soil	MADDYGKQSLLGNGYRLDLVSVPGVVVLRTEDGSEVARFSVCDATSKVVERAAQEHQLTNQKV*
Ga0126310_100467981	3300010044	Serpentine Soil	TLEHEASGMEHAEGRVLLGKGYRLDLVSIPGAIVLRREDGTEVSRFRVRDATRQAIEQAARKDQRTNQRE*
Ga0126310_101367472	3300010044	Serpentine Soil	MDNIERQSFLGNGYRLDLVSVHSVIVLRRDDGTEVTRFRVQDATSQAIEQAAQEDQRTNQKV*
Ga0126310_102313521	3300010044	Serpentine Soil	MDGNRHQSLLGNGYYLDLVNNSGLIVLCREDGTEVAKFSVWDATGEAIERAAREDQSKNQQA*
Ga0126310_102518011	3300010044	Serpentine Soil	MDGNRHQSLLGNGYYLDLVNNSGLIVLCREDGTEVAQFSVWDATSEAIERAAREDQSENQQA*
Ga0126310_104115011	3300010044	Serpentine Soil	MENTEEQSFLGHGYRLDLVSDPSVIVLRREDGTEVARFRVRDATSEAIEQAAYEDQRKKQKV*
Ga0126310_112344781	3300010044	Serpentine Soil	MDHDEGRSLLGHGYRLDLVRFSGKIPLCREDGTEVARFSMWEATARVIEQAARDDRRRIQQG*
Ga0126310_112641911	3300010044	Serpentine Soil	VTTILRNEASGMEHTEVRSLLGKGYRLDLVSVPGAIVLRREDGTEVSRLRVRDATSEAIEQAAHEDQRTNQGE*
Ga0126310_113455312	3300010044	Serpentine Soil	SGIDHTEGRSLLGNGYRLDLVSVPSVIVLRREDGTEVSRFRVRDATSEAIEQAAREDQCTNQRE*
Ga0126311_105993871	3300010045	Serpentine Soil	EVRSLLGKGYRLDLVSVPGAIVLRREDGTEVSRFSVRDATSEAIEQAAKEDQRANQNRKM
Ga0126311_111624801	3300010045	Serpentine Soil	MDGNRHQSLLGNGYYLDLVHNSGLIVLCRDDGTEVAKFSVWDATSEALERAAREDQSKDKQA*
Ga0126311_113923221	3300010045	Serpentine Soil	MDDYEGQSLLGNGYRLDLVSVPGTIVLRREDGIEVAKFSIWDATSKAIEQAAQEDQRRNQKV*
Ga0126306_100970193	3300010166	Serpentine Soil	MDDNEEQTLLGKGYRLDLVSVPGTIVLRRVDSTEIARFSVWDATSKAIEQAAQEDQRRNQEV*
Ga0126306_101216183	3300010166	Serpentine Soil	MDDNERQSFLGHGYRLDLVSVPGVTVLRREDGTEVARFSIWDATSKAIEQAAQEDQRTNQKV*
Ga0126306_101272331	3300010166	Serpentine Soil	PLLGNGYYLDLVNAFGLIVLCRDDGTEVTRFSVWDATSQAIERAAREDLRRTQQR*
Ga0126306_101339871	3300010166	Serpentine Soil	MNRNEERPLLGNGYYLDLVNRFGLILLCRDDGTEVAEFSVWDATSEAIERAAREDQSKNQQE*
Ga0126306_116429871	3300010166	Serpentine Soil	MDNIERQSFLGSGYRLDLVSVHGVIMLRREDGTEVARLSVWDATSQAIEEAAQEEGYH*
Ga0136613_104932031	3300012681	Polar Desert Sand	LLGNGYRLDLVSVPGATLLRREDGTEVARFSIWDATSKAIEQAAQEDRRTNQLV*
Ga0162650_1000148872	3300012939	Soil	MDHGEEQPLLGNGYYLDLVNHFGLIVLCRDDGVEVASFSVWDATSEAIERAAREDRRREREA*
Ga0163163_122518382	3300014325	Switchgrass Rhizosphere	EEERSLLGNGYCLDLVNHFGLIVLCRDDGTEVTRFSVWDATSQAIERAAREDLRRTQQR*
Ga0182000_101758122	3300014487	Soil	LGHGYRLDLVSVPGAIVLRRDDGTEVSRIRVRDATRQVIEQAAREDQRTNQRE*
Ga0182000_101791123	3300014487	Soil	MDRNEERPLLGNGYYLDLVNRFGLIVLCRDDGTEVAKFSVWDATSEAIEREARKDLHKNRRG*
Ga0182000_103077311	3300014487	Soil	MDHTEGRSLLGNGYRLDLESVPGATLLRREDGTEVARFSIWDATSKAIEQAAREDQRTN*
Ga0190275_100372334	3300018432	Soil	MDHGEEQPLLGNGYYLDLVNHFGLIVLCRDDGVEVASFSVWDATSEAIERAAREDRRREREA
Ga0190269_111310471	3300018465	Soil	MDTNEGHSLLGNGYYLDLVNHFGLIVLCRDDGTEVASFSVWDATGHAIEQAAQEDQRTKQKVKGAGRVR
Ga0190268_103296012	3300018466	Soil	MDHTEGRSLLGNGYRLDLESVPGATLLRREDGTEVARFSIWDATSKAIEQAAQEDQRTNQNQKV
Ga0190268_119812821	3300018466	Soil	LLGHGYRLDLVSVPGAIVLRREDGTEVSRFRIRDATRQAIEQAAQEDKRTDQNV
Ga0193614_11643572	3300018933	Soil	MAHDHGRQSLLGNGYRLDLVSFIGMVVLRREDGTEVARFRVCDATSKAVEQAARQDQHMRSRAGAKNFT
Ga0193614_11733922	3300018933	Soil	MADDHGKQSLLGNGYRLDLVSVPGVVVLRTEDGSEVARFSVCDATSKVIEQAAQEHQRTNQKVKSLLMGM
Ga0190267_100259672	3300019767	Soil	MEHEEERSLLGNGYYLDLVNAFGLIVLCRDDGTEVTRFSVWDATSQAIERAAREDLRRTQQS
Ga0190267_103937722	3300019767	Soil	MDTNEGHSLLGNGYYLDLVNHFGLIVLCRDDGTEVASFSVWDATGHAIEQAAQEDQRTNQKVKGASRVK
Ga0190267_105038482	3300019767	Soil	MDRDERPLLGNGYYLDLVNHFGLIVLCRDDGVEVARFSVWDATSEAIEQAAREDR
Ga0190267_105429731	3300019767	Soil	MDSNQEQPLLGNGYYLDLVHNFGWIVLCRDDGTEVAKFSVWDATSEAIERAAREDHSKNQ
Ga0307276_100808531	3300028705	Soil	MDYNEGRSLLGNGYRLDLVRVSGKIVLCREDGTVVARFSMREATARAIEQTAHEDRRRKNREA
Ga0307297_102774371	3300028754	Soil	MDRNEERPLLGNGYYLDLVNRFGLIVLCRDDGTEVAKFSVWDATSEAIEREAREDRRRIRQG
Ga0268240_100070401	3300030496	Soil	MDNIKRQSFLGNGYRLDLVSVHGVIMLRREDGTEVARFSVWDATSQAIEEAAQEEGHHLLSCARKAC
Ga0308201_103637661	3300031091	Soil	MDRDDERPLLGNGYYLDLVNHFGLIVLCRDDGVEVARFSVWDATSEAIEQAAREDRRREREA
Ga0307408_1001729613	3300031548	Rhizosphere	MDDYRGQSFLGNGYRLDLVSVPGTIVLRREDGTEVASFSVWDATSKAIEEAAQEDQRTNQKV
Ga0307405_116752821	3300031731	Rhizosphere	MDGNEGQTLLGNGYYLDLVNNLGVIVLRRDDGTEVARFSVWEATSKAIEQAAKADQRRNQKV
Ga0307407_116614201	3300031903	Rhizosphere	MDVNEGQSLLGNGYYLDLVNNFGLIVLRRDDGTEVARFSVWDATSTAIEQAAKADQRRNQKV
Ga0307409_1028836881	3300031995	Rhizosphere	MDNDEGQSFLGNGYRLDLVRVPGVIVLCKDDGTEVARFSVWEATSKAIEQAAKADQRRNQKV
Ga0307416_1030873811	3300032002	Rhizosphere	MDDYEGQSLLGNGYRLDLVSVPGTIVLRREDGIEVAKFSIWDATSKAIEQAAQEDQRTNQKV
Ga0268251_100270341	3300032159	Agave	MDNVERQSFLGNGYRLDLVSVHGVIMLRREDGTEVARFSVWDATSQAIEEAAQEEGHHLLSCARKAC
Ga0268251_104298262	3300032159	Agave	MDHTNERSLLGNGYHLDLMRASGKVVLCREDGTEVARFSIREATARAIEQAAQEYQGGIRLG
Ga0334911_021645_455_643	3300034131	Sub-Biocrust Soil	MDGNRHQSLLGNGYYLDLVNNSGLIVLCREDGTEVAKFTVWDATSEAIERVARKDQSENQQA
Ga0334915_042069_633_821	3300034132	Hypolithic Biocrust	MDHTEGRSLLGNGYRLDLVSVPGVIVLRREDGTEVSRFSVRDATSKAIEQAAQEDQRTNQLV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091339

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences