Metagenome Family F091315

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091315
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	74 residues
Representative Sequence	MPNNNVEAVVTVEEYDEDEYGADDFGFVLGPDGELKSFMIPEHLMEDPPEEVMMILSIFGIDDINELGNRTLH
Number of Associated Samples	71
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.22 %
% of genes near scaffold ends (potentially truncated)	26.17 %
% of genes from short scaffolds (< 2000 bps)	49.53 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (39.252 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (59.813 % of family members)
Environment Ontology (ENVO)	Unclassified (94.393 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (97.196 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.81% β-sheet: 8.91% Coil/Unstructured: 72.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02777	Sod_Fe_C	26.17
PF03851	UvdE	5.61
PF13392	HNH_3	4.67
PF13884	Peptidase_S74	4.67
PF08241	Methyltransf_11	4.67
PF09286	Pro-kuma_activ	3.74
PF05345	He_PIG	2.80
PF01391	Collagen	2.80
PF07460	NUMOD3	1.87
PF00574	CLP_protease	1.87
PF12733	Cadherin-like	1.87
PF02562	PhoH	1.87
PF10431	ClpB_D2-small	0.93
PF07883	Cupin_2	0.93
PF13640	2OG-FeII_Oxy_3	0.93
PF00004	AAA	0.93
PF03721	UDPG_MGDP_dh_N	0.93
PF16778	Phage_tail_APC	0.93
PF01467	CTP_transf_like	0.93
PF09414	RNA_ligase	0.93
PF05050	Methyltransf_21	0.93
PF00117	GATase	0.93
PF16363	GDP_Man_Dehyd	0.93
PF07733	DNA_pol3_alpha	0.93
PF07880	T4_gp9_10	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	26.17
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	5.61
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.74
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	3.74
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	3.74
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.87
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	1.87
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	1.87
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.93
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.93
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.93
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.93
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.93
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.75 %
Unclassified	root	N/A	39.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.25 %
Viruses	superkingdom	All Organisms → Viruses	38.32 %
cellular organisms	root	All Organisms → cellular organisms	22.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.25 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	33.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.25 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	33.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.25 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	33.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.25 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	33.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.25 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	30.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.25 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	30.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c008736	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300003787\|Ga0007811_1000048	Not Available	17357	Open in IMG/M
3300003787\|Ga0007811_1000199	All Organisms → cellular organisms → Bacteria	9044	Open in IMG/M
3300003787\|Ga0007811_1017363	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300003789\|Ga0007835_1005127	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300003820\|Ga0007863_1021718	Not Available	543	Open in IMG/M
3300004095\|Ga0007829_10117819	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	548	Open in IMG/M
3300004112\|Ga0065166_10250337	Not Available	712	Open in IMG/M
3300004684\|Ga0065168_1002029	Not Available	3366	Open in IMG/M
3300004685\|Ga0065177_1008433	Not Available	1901	Open in IMG/M
3300004685\|Ga0065177_1012005	Not Available	1606	Open in IMG/M
3300004686\|Ga0065173_1000143	All Organisms → cellular organisms → Bacteria	11584	Open in IMG/M
3300004687\|Ga0065174_1005573	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300004692\|Ga0065171_1006562	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1841	Open in IMG/M
3300004694\|Ga0065170_1006854	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1549	Open in IMG/M
3300004770\|Ga0007804_1001150	All Organisms → cellular organisms → Bacteria → Proteobacteria	9262	Open in IMG/M
3300004770\|Ga0007804_1018449	All Organisms → Viruses → Predicted Viral	1960	Open in IMG/M
3300004777\|Ga0007827_10027194	All Organisms → Viruses → Predicted Viral	1382	Open in IMG/M
3300004777\|Ga0007827_10035690	Not Available	1181	Open in IMG/M
3300004807\|Ga0007809_10027638	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1946	Open in IMG/M
3300004807\|Ga0007809_10212517	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	556	Open in IMG/M
3300006071\|Ga0007876_1000466	Not Available	15525	Open in IMG/M
3300006071\|Ga0007876_1002057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6560	Open in IMG/M
3300006071\|Ga0007876_1016466	Not Available	2102	Open in IMG/M
3300006071\|Ga0007876_1130081	Not Available	638	Open in IMG/M
3300006072\|Ga0007881_1014613	Not Available	2282	Open in IMG/M
3300006100\|Ga0007806_1070036	Not Available	658	Open in IMG/M
3300006101\|Ga0007810_1070328	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	695	Open in IMG/M
3300006103\|Ga0007813_1031654	All Organisms → Viruses → Predicted Viral	1172	Open in IMG/M
3300006103\|Ga0007813_1053786	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	827	Open in IMG/M
3300006105\|Ga0007819_1000755	Not Available	10505	Open in IMG/M
3300006105\|Ga0007819_1010505	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300006114\|Ga0007815_1019644	Not Available	1561	Open in IMG/M
3300006115\|Ga0007816_1009191	All Organisms → cellular organisms → Bacteria → Proteobacteria	2423	Open in IMG/M
3300006116\|Ga0007807_1013402	Not Available	1936	Open in IMG/M
3300006116\|Ga0007807_1109873	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	503	Open in IMG/M
3300006119\|Ga0007866_1088963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	569	Open in IMG/M
3300006127\|Ga0007805_1000422	Not Available	14879	Open in IMG/M
3300006127\|Ga0007805_1047812	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	949	Open in IMG/M
3300008055\|Ga0108970_10958467	Not Available	576	Open in IMG/M
3300009151\|Ga0114962_10003024	All Organisms → cellular organisms → Bacteria	13770	Open in IMG/M
3300009151\|Ga0114962_10010065	Not Available	7016	Open in IMG/M
3300009151\|Ga0114962_10066476	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2321	Open in IMG/M
3300009154\|Ga0114963_10001000	Not Available	19481	Open in IMG/M
3300009154\|Ga0114963_10003658	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10526	Open in IMG/M
3300009161\|Ga0114966_10014004	All Organisms → cellular organisms → Bacteria → Proteobacteria	6275	Open in IMG/M
3300009182\|Ga0114959_10020125	Not Available	4259	Open in IMG/M
3300009182\|Ga0114959_10023218	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3893	Open in IMG/M
3300009419\|Ga0114982_1000430	Not Available	22625	Open in IMG/M
3300009684\|Ga0114958_10042594	All Organisms → cellular organisms → Bacteria → Proteobacteria	2472	Open in IMG/M
3300010157\|Ga0114964_10018986	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3960	Open in IMG/M
3300010885\|Ga0133913_10361129	All Organisms → Viruses → Predicted Viral	3841	Open in IMG/M
3300012667\|Ga0157208_10001853	Not Available	4405	Open in IMG/M
3300013093\|Ga0164296_1004777	All Organisms → cellular organisms → Bacteria	12173	Open in IMG/M
3300013093\|Ga0164296_1101265	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1210	Open in IMG/M
3300013285\|Ga0136642_1000651	Not Available	16877	Open in IMG/M
3300020151\|Ga0211736_10480311	Not Available	1063	Open in IMG/M
3300020710\|Ga0214198_1048180	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	502	Open in IMG/M
3300020718\|Ga0214178_1017505	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	969	Open in IMG/M
3300020718\|Ga0214178_1018026	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	953	Open in IMG/M
3300021131\|Ga0214206_1004808	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2365	Open in IMG/M
3300021135\|Ga0214247_1050843	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	655	Open in IMG/M
3300021138\|Ga0214164_1028073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1452	Open in IMG/M
3300021138\|Ga0214164_1028139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1450	Open in IMG/M
3300021142\|Ga0214192_1003684	Not Available	7535	Open in IMG/M
3300021142\|Ga0214192_1004516	All Organisms → cellular organisms → Bacteria	6642	Open in IMG/M
3300021142\|Ga0214192_1012993	All Organisms → cellular organisms → Bacteria	3241	Open in IMG/M
3300021142\|Ga0214192_1027661	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1941	Open in IMG/M
3300021354\|Ga0194047_10173726	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	869	Open in IMG/M
3300022602\|Ga0248169_108557	All Organisms → cellular organisms → Bacteria	8615	Open in IMG/M
3300023184\|Ga0214919_10097123	Not Available	2525	Open in IMG/M
3300023184\|Ga0214919_10159046	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1776	Open in IMG/M
3300025358\|Ga0208504_1001634	All Organisms → cellular organisms → Bacteria	4401	Open in IMG/M
3300025358\|Ga0208504_1002723	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3106	Open in IMG/M
3300025358\|Ga0208504_1015345	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1069	Open in IMG/M
3300025369\|Ga0208382_1005261	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2499	Open in IMG/M
3300025379\|Ga0208738_1000168	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	20416	Open in IMG/M
3300025379\|Ga0208738_1063618	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	514	Open in IMG/M
3300025383\|Ga0208250_1030330	Not Available	857	Open in IMG/M
3300025383\|Ga0208250_1057985	Not Available	549	Open in IMG/M
3300025387\|Ga0207959_1004368	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2800	Open in IMG/M
3300025389\|Ga0208257_1044437	Not Available	633	Open in IMG/M
3300025391\|Ga0208740_1000042	Not Available	53205	Open in IMG/M
3300025391\|Ga0208740_1057251	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	529	Open in IMG/M
3300025398\|Ga0208251_1062482	Not Available	575	Open in IMG/M
3300025407\|Ga0208378_1000820	All Organisms → cellular organisms → Bacteria	9624	Open in IMG/M
3300025407\|Ga0208378_1002943	All Organisms → cellular organisms → Bacteria	4394	Open in IMG/M
3300025413\|Ga0208614_1000621	Not Available	10208	Open in IMG/M
3300025417\|Ga0208616_1004860	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300025421\|Ga0207958_1005350	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2564	Open in IMG/M
3300025435\|Ga0208618_1014808	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1706	Open in IMG/M
3300025450\|Ga0208744_1000472	Not Available	14479	Open in IMG/M
3300025450\|Ga0208744_1111408	Not Available	514	Open in IMG/M
3300025487\|Ga0208105_1033121	Not Available	962	Open in IMG/M
3300025487\|Ga0208105_1077035	Not Available	564	Open in IMG/M
3300025723\|Ga0208741_10000542	Not Available	17368	Open in IMG/M
3300025723\|Ga0208741_10001018	All Organisms → cellular organisms → Bacteria → Proteobacteria	11992	Open in IMG/M
3300025723\|Ga0208741_10099919	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	660	Open in IMG/M
3300025782\|Ga0208867_1041254	Not Available	656	Open in IMG/M
3300027708\|Ga0209188_1000050	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	138091	Open in IMG/M
3300027708\|Ga0209188_1037516	Not Available	2255	Open in IMG/M
3300027708\|Ga0209188_1140693	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	921	Open in IMG/M
3300027710\|Ga0209599_10000584	Not Available	22568	Open in IMG/M
3300027712\|Ga0209499_1100750	Not Available	1097	Open in IMG/M
3300027741\|Ga0209085_1000464	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29816	Open in IMG/M
3300027749\|Ga0209084_1003316	Not Available	11934	Open in IMG/M
3300027770\|Ga0209086_10077954	All Organisms → Viruses → Predicted Viral	1756	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.20%
Terrestrial	Environmental → Terrestrial	1.87%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	97.20%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.87%
Leaf	Host-Associated → Plants → Leaf	0.93%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	71.96%
Lake	Environmental → Aquatic → Freshwater → Lake	24.30%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.87%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.93%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	60.75%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	24.30%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	10.28%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.87%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	59.81%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	16.82%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	10.28%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.87%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.93%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.93%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300004095	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004685	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (version 2)	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004687	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul08 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004694	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006114	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006116	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012667	Freshwater microbial communities from Maskinonge River, Ontario, Canada - S15	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020718	Freshwater microbial communities from Trout Bog Lake, WI - 17SEP2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021135	Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025387	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025391	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025398	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025413	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025417	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025421	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025435	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025450	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025487	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025723	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025782	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0087362	3300000176	Freshwater	MPNNNVETVVEIEEYDETTNEYGPDDFGFVLGPDGDLKSFMIPEHLMDDPPEEVMIILSLFGIDDIHDLGNRTLH*
Ga0007811_100004822	3300003787	Freshwater	MPNNNIEAIVHIEEYDEEEYGADDFGFVLGPDGELKSFMIPEHLMDDPPEEVMMILSIFGIDDINELGNRTLH*
Ga0007811_10001999	3300003787	Freshwater	MSNNNLEALVSIEEYEEDDDYGPDDFGFVIGPDGSLKSFMIPQHLMEDPPEEIQLILSIFGIENIHDLEHRTLH*
Ga0007811_10173632	3300003787	Freshwater	MPNENIQAVVTVEEYDDDEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDLKDLGNRTLH*
Ga0007835_10051272	3300003789	Freshwater	MPNNNVETVVEIEEYDETTNEYGPDDFGFVLGPDGDLKSFMIPEHLMDDPPEEVLIILSLFGIDDIHDLENRTLH*
Ga0007863_10217181	3300003820	Freshwater	PNNNVETVVEIEEYDETTNEYGPDDFGFVLGPDGDLKSFMIPEHLMEDPPEEVLIILSLFGIDDIHDLENRTLH*
Ga0007829_101178191	3300004095	Freshwater	MPNNAEAIVTIEEYEEDSDMGPDDFAFVVSGDGELKSFMIPEHLMENPPEEITLILKLFGIDDINQLGDQTLH*
Ga0065166_102503371	3300004112	Freshwater Lake	MPNNNVTASVTIEEIEETEDIGADDFAFVIGPNGELKSFMMPEHLMEDPPEEVQMILELFGINDVHELGNRTLH*
Ga0065168_10020291	3300004684	Freshwater	NNLEALVSIEEYEEDDDYGPDDFGFVIGPDGSLKSFMIPQHLMEDPPEEIQLILSIFGIENIHDLEHRTLH*
Ga0065177_10084331	3300004685	Freshwater	MPNNNIQAVVTVEEYDEEEYGADDFGFVLGPDGELKQFMIPEHLMDDPPEEVMMILSIFGIDDINDLGNRTLH*
Ga0065177_10120051	3300004685	Freshwater	MPNNNVEAVVTVEEYDEDEYGADDFGFVLGPDGELKSFMIPEHLMEDPPEEVMMILSIFGIDDINELGNRTLH*
Ga0065173_10001437	3300004686	Freshwater	MPNNVTATVEIEEIEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMDDPPEEVKIILSIFGIDNIHDLENRTLH*
Ga0065174_10055732	3300004687	Freshwater	MPNNNVETVVEIEEYDETTNEYGPDDFGFVLGPDGDLKSFMIPEHLMEDPPEEVLIILSLFGIDDIHDLENRTLH*
Ga0065171_10065622	3300004692	Freshwater	MPNENIQAVVTVEEYDEEEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDIKDLGHRTLH*
Ga0065170_10068542	3300004694	Freshwater	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIHDLEDRTLH*
Ga0007804_10011506	3300004770	Freshwater	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLAILSIFGIDNINDLENPTLH*
Ga0007804_10184493	3300004770	Freshwater	NMSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIHDLEDRTLH*
Ga0007827_100271942	3300004777	Freshwater	MPNENIQAVVTVEEYDEEEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMIQSIFGIDDIKDLGHRTLH*
Ga0007827_100356902	3300004777	Freshwater	MANNAQSDVVSIEEYETNELEADDFGFVIGPDGELKSFMIPEHLMTDPPEEVLAILSIYGIDDITTLTNPTIH*
Ga0007809_100276383	3300004807	Freshwater	MSNNVVATQVVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLAILSIFGIDNINDLENPTLH*
Ga0007809_102125172	3300004807	Freshwater	MPNNNVETVVEIEEYDETTNEYGPDDFRFVLGPDGDLKSFMIPEHLMEDPPEEVLIILSLFGIDDIHDLENRTLH*
Ga0007876_10004662	3300006071	Freshwater	MVNDQEICYTLYGVKSMPNSNIEATVTVEEYEEDNEYGPDDFGFVLGPDGDLKSFMIPEHLMEDPPEEVLMILSIFGIDDINDLGNRTLH*
Ga0007876_100205713	3300006071	Freshwater	MCYTLSGERIMPNNVTATVEIEEIEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMDDPPEEVKIILSIFGIDNIHDLENRTLH*
Ga0007876_10164661	3300006071	Freshwater	NMLYFIWRESMPNENIQAVVTVEEYDDDEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDLKDLGNRTLH*
Ga0007876_11300811	3300006071	Freshwater	FLNRRSNMPNSATAIAEIEEFEETEDYGKDDFGFILGPDGQLKTFMIPEHLMEDPPEEVLMILSIFGIDDIHELGNPTLH*
Ga0007881_10146132	3300006072	Freshwater	MPNENIQAVVTVEEYDEEEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDLKDLGNRTLH*
Ga0007806_10700362	3300006100	Freshwater	RSNMPNSATAIAEIEEFEETEDYGKDDFGFILGPDGQLKTFMIPEHLMEDPPEEVLMILSIFGIDDIHELGNPTLH*
Ga0007810_10703282	3300006101	Freshwater	MSNNVVATQAVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIHDLEDRTLH*
Ga0007813_10316541	3300006103	Freshwater	VEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIHDLEDRTLH*
Ga0007813_10537861	3300006103	Freshwater	VEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLAILSIFGIDNINDLENPTLH*
Ga0007819_10007552	3300006105	Freshwater	MPNSATAIAEIEEFEETEDYGKDDFGFILGPDGQLKTFMIPEHLMEDPPEEVLMILSIFGIDDIHELGNPTLH*
Ga0007819_10105052	3300006105	Freshwater	MPNNIEAIVTVEEYDEEEYGADDFGFVLGPDGELKSFMIPEHLMDDPPEEVMMILSIFGIDDINDLGNRTLH*
Ga0007815_10196441	3300006114	Freshwater	MPNNNIQAVVTVEEYDEEEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDLKDLGNRTLH*
Ga0007816_10091915	3300006115	Freshwater	MLYFIWRESMPNENIQAVVTVEEYDDDEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDLKDLGNRTLH*
Ga0007807_10134023	3300006116	Freshwater	MPNNAEAIVTIEEYEEDSDMGPDDFAFVVSGDGELKSFMIPEHLMENPPEEITLILKLFGIDDINQLGDQTLHCQNTF
Ga0007807_11098732	3300006116	Freshwater	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDNIHDLEDRTLH*
Ga0007866_10889632	3300006119	Freshwater	MPNNNIQAVVTVEEYDEEEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDIKDLGHRTLH*
Ga0007805_10004221	3300006127	Freshwater	DQEICYTLYGVKSMPNSNIEATVTVEEYEEDNEYGPDDFGFVLGPDGDLKSFMIPEHLMEDPPEEVLMILSIFGIDDINDLGNRTLH*
Ga0007805_10478121	3300006127	Freshwater	MPNSATAIAEIEEFEETEDYGKDDFGFILGPDGQLKTFMIPEHLMEDPPEEVLMILSIFGIDDIHELGNPT
Ga0108970_109584672	3300008055	Estuary	SYAIRILCFWSKIMPNNNVTASVTIEEIEETEDIGADDFAFVIGPNGELKSFMMPEHLMEDPPEEVQMILELFGINDVHELGNRTLH*
Ga0114962_100030243	3300009151	Freshwater Lake	MSNNNVEAVVTIEEYDEENDYGPDDFGFVLGPDGELKSFMIPEHLMEDPPEEVLMILSIFGIDNIHELENKTLH*
Ga0114962_100100653	3300009151	Freshwater Lake	MTNNIIGSIVEIEEYDEDNEMERDDFAFVIGPDGDLKSMIIPEHLMNDPPEEVKMILEMFGIDSIHDLNNKLLH*
Ga0114962_100664764	3300009151	Freshwater Lake	VENNMPNNNIIATSAIEEFEETEDFGKDDYGFILGPDGDLKSFMMPEHLMNDPPEEVKMILSMFGIDDINELGNGLLH*
Ga0114963_100010009	3300009154	Freshwater Lake	MSNDINALVSYEEYVENDEYDPDDFGFVLRPDGSLKSFMIPEHLMTDPPEEVKLILELFGIDSIHELTDRTLH*
Ga0114963_100036587	3300009154	Freshwater Lake	MSNNYEVQVTVEECTEDDEYDPDDFGFVVGADGNLKSCMIPEHLMDDPPEEVKIILELFGIDNIHDLGQKTLH*
Ga0114966_100140043	3300009161	Freshwater Lake	MPNNNVETVVTIEEYDEENEYGPDDFGFVLGPDGDLKSFMIPEHLMEDPPEEVLAILSIFGIDNIYDLENRILH*
Ga0114959_100201253	3300009182	Freshwater Lake	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLAILSIFGIDNIHDLEDRPLH*
Ga0114959_100232184	3300009182	Freshwater Lake	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLAILSIFGIDDIHDLEDRTLH*
Ga0114982_100043033	3300009419	Deep Subsurface	MPNNPNISASVEIEEFEENEDVGKDDFAFVLGPDGDLKTFMIPEHLMEDPPEEVKLILSLFGIDDIYELENRTLH*
Ga0114958_100425943	3300009684	Freshwater Lake	MSINNAAITVEIEEIDENDECGRDDFGFIIGPDGELKSLMIPEHLMDDPPEEVLAILEMFGIDDIHDLGNRLLH*
Ga0114964_100189863	3300010157	Freshwater Lake	MPNNNIIATSAIEEFEETEDFGKDDYGFILGPDGDLKSFMMPEHLMNDPPEEVKMILSMFGIDDINELGNGLLH*
Ga0133913_103611294	3300010885	Freshwater Lake	SNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLAILSIFGIDDIHDLEDRTLH*
Ga0157208_100018534	3300012667	Freshwater	MPNNPNISASVEIEEFEENEDIGKDDFAFIIGPDGDLKTFMIPEHLMEDPPEEVKMILSLFGIDNLYELENRTLH*
Ga0164296_10047772	3300013093	Freshwater	MPNNAEAIVTIEEYEEDSDMGPDDFAFVISGDGELKSFMIPEHLMDDPPEEITLILKLFGITDINDLGDQTLH*
Ga0164296_11012652	3300013093	Freshwater	MSNNTEAIVSIEEYEEDSDLGPDDFSFIISGDGELKSFMIPEHLMDDPPEEILAILSIFGVGDIHELTNSTLH*
Ga0136642_10006515	3300013285	Freshwater	MSITKHGGSMSNNNFEAVVSIEECSEEDDFGPDDFSFVLGPDGELKSFMIPEHLMDDPPEEVQLILNLFGIESIYDLENRTLH*
Ga0211736_104803111	3300020151	Freshwater	MPNDASAVSIEIEEFEETEDFGKDDFGFILGPNGELKTFMIPEHLMTEPPEEVKMILSIFGIDDINDLENKLLH
Ga0214198_10481801	3300020710	Freshwater	MSNNVVATQAVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLAILSIFGIDDIHDLEDRTLH
Ga0214178_10175051	3300020718	Freshwater	MPNNNVETVVEIEEYDETTNEYGPDDFGFVLGPDGDLKSFMIPEHLMDDPPEEVMIILSLFGIDDIHDLGNRTLH
Ga0214178_10180262	3300020718	Freshwater	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIHDLEDRTLH
Ga0214206_10048084	3300021131	Freshwater	MPNENIQAVVTVEEYDEEEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDIKDLGHRTLH
Ga0214247_10508432	3300021135	Freshwater	MSNNVVATQAVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIHDLEDRTLH
Ga0214164_10280731	3300021138	Freshwater	VETVVEIEEYDETTNEYGPDDFGFVLGPDGDLKSFMIPEHLMDDPPEEVMIILSLFGIDDIHDLGNRTLH
Ga0214164_10281393	3300021138	Freshwater	VETVVEIEEYDETTNEYGPDDFGFVLGPDGDLKSFMIPEHLMEDPPEEVLIILSLFGIDDIHDLENRTLH
Ga0214192_10036841	3300021142	Freshwater	MPNNNIEAIVHIEEYDEEEYGADDFGFVLGPDGELKSFMIPEHLMDDPPEEVMMILSIFGIDDINDLGNRTLH
Ga0214192_10045165	3300021142	Freshwater	MPNENIQAVVTVEEYDDDEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDLKDLGNRTLH
Ga0214192_10129932	3300021142	Freshwater	MPNNNIQAVVTVEEYDEEEYGADDFGFVLGPDGELKQFMIPEHLMDDPPEEVMMILSIFGIDDINDLGNRTLH
Ga0214192_10276612	3300021142	Freshwater	MPNNNVETVVEIEEYDETTNEYGPDDFGFVLGPDGDLKSFMIPEHLMEDPPEEVLIILSLFGIDDIHDLENRTLH
Ga0194047_101737262	3300021354	Anoxic Zone Freshwater	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPENLMEDPPEEVLAILSIFGIDNIHDLEDRPLH
Ga0248169_1085576	3300022602	Freshwater	MPNNAEAIVTIEEYEEDSDMGPDDFAFVISGDGELKSFMIPEHLMDDPPEEITLILKLFGITDINDLGDQTLH
Ga0214919_100971231	3300023184	Freshwater	MTNNIIGSIVEIEEYDEDNEMERDDFAFVIGPDGDLKSMIIPEHLMNDPPEEVKMILEMFGIDSIHDLNNKLLH
Ga0214919_101590464	3300023184	Freshwater	MTNNIIESIVEIEEYDEDNEMERDDFAFVIGPDGDLKSMIIPEHLMNDPPEEVKMILEMFGIDSIHDLNNKLLH
Ga0208504_10016343	3300025358	Freshwater	MPNNNIEAIVHIEEYDEEEYGADDFGFVLGPDGELKSFMIPEHLMDDPPEEVMMILSIFGIDDINELGNRTLH
Ga0208504_10027232	3300025358	Freshwater	MPNNNVETVVEIEEYDETTNEYGPDDFGFVLGPDGDLKSFMIPEHLMDDPPEEVLIILSLFGIDDIHDLENRTLH
Ga0208504_10153453	3300025358	Freshwater	MPNNVTATVEIEEIEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMDDPPEEVKIILSIFGIDNIHDLENRTLH
Ga0208382_10052614	3300025369	Freshwater	MCYTLSGERIMPNNVTATVEIEEIEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMDDPPEEVKIILSIFGIDNIHDLENRTLH
Ga0208738_100016833	3300025379	Freshwater	MSNNNLEALVSIEEYEEDDDYGPDDFGFVIGPDGSLKSFMIPQHLMEDPPEEIQLILSIFGIENIHDLEHRTLH
Ga0208738_10636181	3300025379	Freshwater	MVNDQEICYTLYGVKSMPNSNIEATVTVEEYEEDNEYGPDDFGFVLGPDGDLKSFMIPEHLMEDPPEEVLMILSIFGIDDINDLGNRTLH
Ga0208250_10303301	3300025383	Freshwater	MPNNAEAIVTIEEYEEDSDMGPDDFAFVVSGDGELKSFMIPEHLMENPPEEITLILKLFGIDDINQLGDQTLH
Ga0208250_10579852	3300025383	Freshwater	NMPNSATAIAEIEEFEETEDYGKDDFGFILGPDGQLKTFMIPEHLMEDPPEEVLMILSIFGIDDIHELGNPTLH
Ga0207959_10043681	3300025387	Freshwater	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIH
Ga0208257_10444372	3300025389	Freshwater	ATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIHDLEDRTLH
Ga0208740_100004259	3300025391	Freshwater	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLAILSIFGIDNINDLENPTLH
Ga0208740_10572512	3300025391	Freshwater	EVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIHDLEDRTLH
Ga0208251_10624822	3300025398	Freshwater	ATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLAILSIFGIDNINDLENPTLH
Ga0208378_10008201	3300025407	Freshwater	DQEICYTLYGVKSMPNSNIEATVTVEEYEEDNEYGPDDFGFVLGPDGDLKSFMIPEHLMEDPPEEVLMILSIFGIDDINDLGNRTLH
Ga0208378_10029432	3300025407	Freshwater	MLYFIWRESMPNENIQAVVTVEEYDDDEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDLKDLGNRTLH
Ga0208614_100062117	3300025413	Freshwater	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDNIHDLEDRTLH
Ga0208616_10048601	3300025417	Freshwater	MPNNNIQAVVTVEEYDEEEYGADDFGFELGPDGELKQFMIPEHLMDDPPEEVMMILSIFGIDDIND
Ga0207958_10053502	3300025421	Freshwater	MSNNVVATQVVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIHDLEDRTLH
Ga0208618_10148082	3300025435	Freshwater	MPNNNVEAVVTVEEYDEDEYGADDFGFVLGPDGELKSFMIPEHLMEDPPEEVMMILSIFGIDDINELGNRTLH
Ga0208744_100047217	3300025450	Freshwater	KSMPNNIEAIVTVEEYDEEEYGADDFGFVLGPDGELKSFMIPEHLMDDPPEEVMMILSIFGIDDINDLGNRTLH
Ga0208744_11114082	3300025450	Freshwater	MPNNAEAIVTIEEYEEDSDMGPDDFAFVVSGDGELKSFMIPEHLMENPPEEITLILKLFGIDDINQLGDQTLHXCQNTF
Ga0208105_10331211	3300025487	Freshwater	MANNAQSDVVSIEEYETNELEADDFGFVIGPDGELKSFMIPEHLMTDPPEEVLAILSIYGIDDITTLTNPTIH
Ga0208105_10770351	3300025487	Freshwater	MPNENIQAVVTVEEYDEEEYGADDFGFVLGPDGELKQFMIPEHLMEDPPEEVMMILSIFGIDDINELGNRTLH
Ga0208741_100005421	3300025723	Freshwater	ATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDNIHDLEDRTLH
Ga0208741_100010181	3300025723	Freshwater	VVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLMILSIFGIDNIHDLEDRTLH
Ga0208741_100999192	3300025723	Freshwater	VVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVMAILSIFGIDDIHDLEDRTLH
Ga0208867_10412541	3300025782	Freshwater	TLYGVKSMPNNNIQAVVTVEEYDEEEYGADDFGFVLGPDGELKQFMIPEHLMDDPPEEVMMILSIFGIDDINDLGNRTLH
Ga0209188_100005036	3300027708	Freshwater Lake	MSNNNVEAVVTIEEYDEENDYGPDDFGFVLGPDGELKSFMIPEHLMEDPPEEVLMILSIFGIDNIHELENKTLH
Ga0209188_10375164	3300027708	Freshwater Lake	MSNNVVATVEVEEFEETEDFGKDDYGFILGPDGELKTFMIPEHLMEDPPEEVLAILSIFGIDNIHDLEDRPLH
Ga0209188_11406932	3300027708	Freshwater Lake	MSNNYEVQVTVEECTEDDEYDPDDFGFVVGADGNLKSCMIPEHLMDDPPEEVKIILELFGIDNIHDLGQKTLH
Ga0209599_1000058416	3300027710	Deep Subsurface	MPNNPNISASVEIEEFEENEDVGKDDFAFVLGPDGDLKTFMIPEHLMEDPPEEVKLILSLFGIDDIYELENRTLH
Ga0209499_11007503	3300027712	Freshwater Lake	MSINNAAITVEIEEIDENDECGRDDFGFIIGPDGELKSLMIPEHLMDDPPEEVLAILEMFGIDDIHDLGNRLLH
Ga0209085_100046438	3300027741	Freshwater Lake	MSNDINALVSYEEYVENDEYDPDDFGFVLRPDGSLKSFMIPEHLMTDPPEEVKLILELFGIDSIHELTDRTLH
Ga0209084_100331618	3300027749	Freshwater Lake	MPNNNIIATSAIEEFEETEDFGKDDYGFILGPDGDLKSFMMPEHLMNDPPEEVKMILSMFGIDDINELGNGLLH
Ga0209086_100779541	3300027770	Freshwater Lake	TIEEYDEENEYGPDDFGFVLGPDGDLKSFMIPEHLMEDPPEEVLAILSIFGIDNIYDLENRILH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091315

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences