Metagenome Family F091244

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F091244
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	45 residues
Representative Sequence	MTKDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQAQLDEVGEALL
Number of Associated Samples	46
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.79 %
% of genes near scaffold ends (potentially truncated)	18.69 %
% of genes from short scaffolds (< 2000 bps)	71.03 %
Associated GOLD sequencing projects	36
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (54.206 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (64.486 % of family members)
Environment Ontology (ENVO)	Unclassified (85.981 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (92.523 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.65% β-sheet: 0.00% Coil/Unstructured: 51.35%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF12705	PDDEXK_1	4.67
PF01612	DNA_pol_A_exo1	3.74
PF13392	HNH_3	2.80
PF11753	DUF3310	2.80
PF05866	RusA	1.87
PF02631	RecX	1.87
PF00271	Helicase_C	1.87
PF03118	RNA_pol_A_CTD	1.87
PF01381	HTH_3	1.87
PF00476	DNA_pol_A	0.93
PF04545	Sigma70_r4	0.93
PF08774	VRR_NUC	0.93
PF07102	YbcO	0.93
PF13872	AAA_34	0.93
PF02195	ParBc	0.93
PF13203	DUF2201_N	0.93
PF07728	AAA_5	0.93
PF04851	ResIII	0.93
PF01555	N6_N4_Mtase	0.93
PF13621	Cupin_8	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	1.87
COG2137	SOS response regulatory protein OraA/RecX, interacts with RecA	Posttranslational modification, protein turnover, chaperones [O]	1.87
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	1.87
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.93
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.93
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.93
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
All Organisms	root	All Organisms	45.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
Viruses	superkingdom	All Organisms → Viruses	42.06 %
cellular organisms	root	All Organisms → cellular organisms	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	14.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	14.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	14.95 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	14.95 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	14.95 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.93 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14.95 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.93 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14.95 %
Acinetobacter baylyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	0.93 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14.95 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.93 %
Acinetobacter baylyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.10 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14.95 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.93 %
Acinetobacter baylyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	0.93 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c000219	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17943	Open in IMG/M
3300002091\|JGI24028J26656_1005216	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1960	Open in IMG/M
3300002091\|JGI24028J26656_1007382	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1502	Open in IMG/M
3300002092\|JGI24218J26658_1044200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	505	Open in IMG/M
3300002307\|JGI24890J29729_1016045	All Organisms → Viruses → Predicted Viral	1915	Open in IMG/M
3300002930\|Water_101427	All Organisms → Viruses → Predicted Viral	4486	Open in IMG/M
3300003375\|JGI26470J50227_1006099	All Organisms → Viruses → Predicted Viral	3287	Open in IMG/M
3300004448\|Ga0065861_1086991	All Organisms → Viruses → Predicted Viral	1645	Open in IMG/M
3300004448\|Ga0065861_1180274	Not Available	628	Open in IMG/M
3300004460\|Ga0066222_1131607	All Organisms → Viruses → Predicted Viral	2201	Open in IMG/M
3300004693\|Ga0065167_1059992	Not Available	636	Open in IMG/M
3300004774\|Ga0007794_10107102	Not Available	833	Open in IMG/M
3300004774\|Ga0007794_10241969	Not Available	536	Open in IMG/M
3300004804\|Ga0007796_10035497	All Organisms → Viruses → Predicted Viral	1706	Open in IMG/M
3300004805\|Ga0007792_10256768	Not Available	537	Open in IMG/M
3300006103\|Ga0007813_1045756	Not Available	918	Open in IMG/M
3300009068\|Ga0114973_10699022	Not Available	516	Open in IMG/M
3300009151\|Ga0114962_10001532	Not Available	19881	Open in IMG/M
3300009151\|Ga0114962_10008337	Not Available	7809	Open in IMG/M
3300009151\|Ga0114962_10077543	All Organisms → Viruses → Predicted Viral	2114	Open in IMG/M
3300009151\|Ga0114962_10085634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1989	Open in IMG/M
3300009151\|Ga0114962_10101547	Not Available	1791	Open in IMG/M
3300009151\|Ga0114962_10115249	Not Available	1655	Open in IMG/M
3300009151\|Ga0114962_10162549	All Organisms → Viruses → Predicted Viral	1332	Open in IMG/M
3300009151\|Ga0114962_10259427	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	987	Open in IMG/M
3300009151\|Ga0114962_10335287	Not Available	834	Open in IMG/M
3300009151\|Ga0114962_10336854	Not Available	831	Open in IMG/M
3300009151\|Ga0114962_10349395	Not Available	812	Open in IMG/M
3300009151\|Ga0114962_10355951	Not Available	802	Open in IMG/M
3300009151\|Ga0114962_10395384	Not Available	749	Open in IMG/M
3300009151\|Ga0114962_10551359	Not Available	604	Open in IMG/M
3300009151\|Ga0114962_10579680	Not Available	584	Open in IMG/M
3300009151\|Ga0114962_10632755	Not Available	552	Open in IMG/M
3300009154\|Ga0114963_10209623	All Organisms → Viruses → Predicted Viral	1124	Open in IMG/M
3300009154\|Ga0114963_10297503	Not Available	900	Open in IMG/M
3300009154\|Ga0114963_10418401	Not Available	724	Open in IMG/M
3300009154\|Ga0114963_10659239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	544	Open in IMG/M
3300009154\|Ga0114963_10697537	Not Available	526	Open in IMG/M
3300009155\|Ga0114968_10278795	Not Available	941	Open in IMG/M
3300009180\|Ga0114979_10825290	Not Available	519	Open in IMG/M
3300009182\|Ga0114959_10026757	All Organisms → Viruses → Predicted Viral	3568	Open in IMG/M
3300009182\|Ga0114959_10048691	Not Available	2471	Open in IMG/M
3300009182\|Ga0114959_10099327	Not Available	1599	Open in IMG/M
3300009182\|Ga0114959_10215130	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	989	Open in IMG/M
3300009684\|Ga0114958_10061087	Not Available	2000	Open in IMG/M
3300009684\|Ga0114958_10239412	Not Available	898	Open in IMG/M
3300009684\|Ga0114958_10266301	Not Available	844	Open in IMG/M
3300009684\|Ga0114958_10396921	Not Available	668	Open in IMG/M
3300010157\|Ga0114964_10009332	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6027	Open in IMG/M
3300010157\|Ga0114964_10046853	All Organisms → Viruses → Predicted Viral	2285	Open in IMG/M
3300010157\|Ga0114964_10360130	Not Available	687	Open in IMG/M
3300010157\|Ga0114964_10422125	Not Available	629	Open in IMG/M
3300010158\|Ga0114960_10157344	All Organisms → Viruses → Predicted Viral	1216	Open in IMG/M
3300010158\|Ga0114960_10158391	All Organisms → Viruses → Predicted Viral	1211	Open in IMG/M
3300010158\|Ga0114960_10563530	Not Available	542	Open in IMG/M
3300010158\|Ga0114960_10639961	Not Available	501	Open in IMG/M
3300010334\|Ga0136644_10259089	All Organisms → Viruses → Predicted Viral	1018	Open in IMG/M
3300010885\|Ga0133913_10013719	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21428	Open in IMG/M
3300010885\|Ga0133913_10038046	Not Available	12908	Open in IMG/M
3300010885\|Ga0133913_11300810	All Organisms → Viruses → Predicted Viral	1857	Open in IMG/M
3300010885\|Ga0133913_13119461	All Organisms → Viruses → Predicted Viral	1099	Open in IMG/M
3300011114\|Ga0151515_10457	Not Available	17981	Open in IMG/M
3300013285\|Ga0136642_1127969	Not Available	641	Open in IMG/M
3300013286\|Ga0136641_1129328	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	690	Open in IMG/M
3300021354\|Ga0194047_10038408	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	2238	Open in IMG/M
3300021354\|Ga0194047_10182684	Not Available	842	Open in IMG/M
3300021354\|Ga0194047_10203568	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	786	Open in IMG/M
3300021519\|Ga0194048_10037737	All Organisms → Viruses → Predicted Viral	1998	Open in IMG/M
3300021519\|Ga0194048_10104832	All Organisms → Viruses → Predicted Viral	1087	Open in IMG/M
3300021519\|Ga0194048_10143115	Not Available	902	Open in IMG/M
3300021519\|Ga0194048_10251717	Not Available	643	Open in IMG/M
3300022602\|Ga0248169_102091	Not Available	25524	Open in IMG/M
3300022602\|Ga0248169_111186	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6857	Open in IMG/M
3300022602\|Ga0248169_133499	All Organisms → Viruses → Predicted Viral	2655	Open in IMG/M
3300025375\|Ga0208259_1032687	Not Available	741	Open in IMG/M
3300025389\|Ga0208257_1008814	All Organisms → Viruses → Predicted Viral	1735	Open in IMG/M
3300025606\|Ga0207954_1069512	Not Available	916	Open in IMG/M
3300027708\|Ga0209188_1000819	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	27829	Open in IMG/M
3300027708\|Ga0209188_1003309	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11250	Open in IMG/M
3300027708\|Ga0209188_1008638	Not Available	5977	Open in IMG/M
3300027708\|Ga0209188_1071693	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1464	Open in IMG/M
3300027708\|Ga0209188_1089008	All Organisms → Viruses → Predicted Viral	1262	Open in IMG/M
3300027708\|Ga0209188_1151036	Not Available	877	Open in IMG/M
3300027708\|Ga0209188_1306577	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	527	Open in IMG/M
3300027712\|Ga0209499_1039654	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2010	Open in IMG/M
3300027712\|Ga0209499_1083063	Not Available	1242	Open in IMG/M
3300027712\|Ga0209499_1313682	Not Available	527	Open in IMG/M
3300027741\|Ga0209085_1031360	All Organisms → Viruses → Predicted Viral	2518	Open in IMG/M
3300027741\|Ga0209085_1080826	All Organisms → Viruses → Predicted Viral	1458	Open in IMG/M
3300027741\|Ga0209085_1092564	All Organisms → Viruses → Predicted Viral	1341	Open in IMG/M
3300027747\|Ga0209189_1016294	All Organisms → Viruses → Predicted Viral	4100	Open in IMG/M
3300027749\|Ga0209084_1035804	Not Available	2507	Open in IMG/M
3300027749\|Ga0209084_1082342	Not Available	1454	Open in IMG/M
3300027749\|Ga0209084_1176597	Not Available	876	Open in IMG/M
3300027749\|Ga0209084_1277739	Not Available	640	Open in IMG/M
3300027749\|Ga0209084_1354365	Not Available	537	Open in IMG/M
3300027777\|Ga0209829_10016896	All Organisms → Viruses → Predicted Viral	4402	Open in IMG/M
3300027777\|Ga0209829_10390537	Not Available	542	Open in IMG/M
3300028392\|Ga0304729_1153456	Not Available	740	Open in IMG/M
3300028392\|Ga0304729_1181552	Not Available	661	Open in IMG/M
3300028393\|Ga0304728_1156372	Not Available	822	Open in IMG/M
3300032562\|Ga0316226_1042212	All Organisms → Viruses → Predicted Viral	2427	Open in IMG/M
3300032579\|Ga0316228_1098193	All Organisms → Viruses → Predicted Viral	1056	Open in IMG/M
3300032605\|Ga0316232_1037343	All Organisms → Viruses → Predicted Viral	2566	Open in IMG/M
3300032668\|Ga0316230_1145986	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	885	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	96.26%
Marine	Environmental → Aquatic → Marine	3.74%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	77.57%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.69%
Coastal	Environmental → Aquatic → Marine → Coastal	2.80%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	77.57%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.02%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	3.74%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.80%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.93%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	64.49%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	10.28%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	6.54%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	3.74%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	3.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.80%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.93%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004693	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA7.5M (version 2)	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011114	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300025375	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22May08 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025606	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032579	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18021	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0002194	3300000176	Freshwater	MTDEEIIAKIQANQWWPFDRVDPRILEEIQRRDKQQLLEEAGDALL*
JGI24028J26656_10052166	3300002091	Lentic	MNKDEIIEELLNNQWWPFDRVDPKILQELVRKDKQDQLDAVGEALL*
JGI24028J26656_10073825	3300002091	Lentic	MNNNEIIEELLNDKWWPFDRVDPKILQELVRKDKQDQLDAVGEALL*
JGI24218J26658_10442001	3300002092	Lentic	MDNEQIIQKIMNNQWWPFDRVDPKILQEVMRREKQNQL
JGI24890J29729_10160455	3300002307	Lentic	MDNEQIIQKIMNNQWWPFDRVDPKILQEVMRREKQNQLNEIGEALL*
Water_1014275	3300002930	Estuary Water	MTKEEIIDKIISNQWWPFDRVDPKILQELVRKDKQDQLNNVGEALL*
JGI26470J50227_10060991	3300003375	Freshwater	MDTEEIIAKIQANQWWPFDRVDPKILDEVMRRDKQQLTDDIGEALL*
JGI26470J50227_10068252	3300003375	Freshwater	MTREEIIAKIMANQWWPFDRVDPKILDEVMRRDKQQDLNNTEDALL*
Ga0065861_10869914	3300004448	Marine	MTKEEIIEQIQTNEWWPFDRVDPKILQEVMRKDKQQAIDEVGEALL*
Ga0065861_11802742	3300004448	Marine	MTNKEIIEQIQANEWWPFDRVDPKILQEIMRKDKQQAIDEVGEALL*
Ga0066222_11316076	3300004460	Marine	MTKEEIIEQIQTNEWWPFDRVDPKILQEVMRKDKQQAIDEVGE
Ga0065167_10599922	3300004693	Freshwater	MNKDEIIEKIQANQWWPFDRVDPKVLQEVMRKDKQAQLDEVGEALL*
Ga0007794_101071023	3300004774	Freshwater	MDTMADRGNKMNKDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQAQLDEVGEALL*
Ga0007794_102419692	3300004774	Freshwater	MTKEEIIAKIQANQWWPFDRVDPKILQEAMRREKQETFDGYEESPI*
Ga0007796_100354973	3300004804	Freshwater	MTDKEIIAKIQTDQWWPFDRVDPKVLQEVMRKDKQQAIDEVGEALL*
Ga0007792_102567681	3300004805	Freshwater	MTKDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQQTIDEVGEALL*
Ga0007813_10457564	3300006103	Freshwater	MDTEEIIAKIQANQWWPFDRVDPKILEEVMRRDKQQLTDGIGEALL*
Ga0114973_106990223	3300009068	Freshwater Lake	MTDDEIIEQILTNNWWPFDRVDPKILQQVIRKDKQQ
Ga0114962_1000153213	3300009151	Freshwater Lake	MTDDEIIEQILANNWWPFDRVDPKILQQVMRKDKQQTIDEVGEALL*
Ga0114962_100083375	3300009151	Freshwater Lake	MEITMTDDEIIEQILANNWWPFDCVDPKILQQAMRKSKQDQLNEVGEALL*
Ga0114962_100775432	3300009151	Freshwater Lake	MTDEEVIEKILANNWWPFDRVDPKLLQEIMRKDKQAQLNKLGEALL*
Ga0114962_100856344	3300009151	Freshwater Lake	MTNEEIIEQIQTNTWWPFDRVDPKILQEAMRKDKKEQLEKVEEALL*
Ga0114962_101015471	3300009151	Freshwater Lake	MNKDEIIEQILANTWWPFDRVDPKILQEAMRKDKKEQLEKVEEALL*
Ga0114962_101152495	3300009151	Freshwater Lake	MNKDEIVQQVLDDKWWPFDRVDPKILQEAMRKDKKQQLDKVEEALL*
Ga0114962_101625493	3300009151	Freshwater Lake	MTDDEIIEQIQTNQWWPFDRVDPKILQEVMRKDKQDKLNEVGEALL*
Ga0114962_102594274	3300009151	Freshwater Lake	MNKDEIVQQVLNDKWWPFDRVDPKILQEAMRKDKKEQLDKVEEALL*
Ga0114962_103352873	3300009151	Freshwater Lake	MTKDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQDQLNEVGEALL*
Ga0114962_103368544	3300009151	Freshwater Lake	MTKDEIIEQIQTNEWWPFDRVDPKILQEIMRKNKQQTIDEVGEALL*
Ga0114962_103493953	3300009151	Freshwater Lake	KDEIIEQIQTNEWWPFDRVDPKILQEVMRKDKQQAIDEVGEALL*
Ga0114962_103559512	3300009151	Freshwater Lake	MNKEEIVERVLANTWWPFDRVDPKILQEVMRKDKQDQLDEVGEALL*
Ga0114962_103953843	3300009151	Freshwater Lake	MNKDEIVQQVLDDKWWPFDRVDPKILQEAMRKDKKEQLDKVEEALL*
Ga0114962_105513593	3300009151	Freshwater Lake	MTDEEVIAKIQANQWWPFDRVDPKILQEVMRKDKQQTIDEVGEALL*
Ga0114962_105796803	3300009151	Freshwater Lake	MTKEEIIEQIQANDWWPFDRVDPKILQQAMRKDKQEQLDEVGEALL*
Ga0114962_106327552	3300009151	Freshwater Lake	MTDDEIMEQIQANQWWPFDRVDPKVLQEVMRKDKQQAIDEVGEALL*
Ga0114963_102096234	3300009154	Freshwater Lake	MTKDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQ
Ga0114963_102975033	3300009154	Freshwater Lake	MTKDEIIEQIQTNEWWPFDRVDPKILQEVMRKNKQEQLDEVGEALL*
Ga0114963_104184013	3300009154	Freshwater Lake	MTDDEIIEQILANTWWPFDRVDPKILQEAMRKDKKEQLEKVEEALL*
Ga0114963_106592392	3300009154	Freshwater Lake	MTDEETIAKIQANEWWPFDRVDPKILQEVMRKDKQQ
Ga0114963_106975373	3300009154	Freshwater Lake	MTKDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQAQLDEVGEALL*
Ga0114968_102787952	3300009155	Freshwater Lake	MTDEEVIEKIQADQWWPFDRVDPKILQEVMRKDKQDKLNEVGEALL*
Ga0114979_108252902	3300009180	Freshwater Lake	MTKDETIEKIQADQWWPFDRVDPKILQELVRKDKQEQLDEVGEALL*
Ga0114959_1002675710	3300009182	Freshwater Lake	MTKDEIIEQIQTNEWWPFDRVDPKILQEVMRKDKQQAIDEVGEALL*
Ga0114959_100486919	3300009182	Freshwater Lake	MTDEEVIEKILANNWWPFDRVDPKILQQAMRKDKQEQLDEVGEALL*
Ga0114959_100993273	3300009182	Freshwater Lake	MNKDEIVQQVLDDKWWPFDRVDPKILQEAMRKDKKEQLDEVEEALL*
Ga0114959_102151304	3300009182	Freshwater Lake	MTDEETIAKIQANEWWPFDRVDPRILQEVMRKDKQAQLDEVGEALL*
Ga0114958_100610876	3300009684	Freshwater Lake	MTDEEVIEKIQADQWWPFDRVDPKILQQAMRKDKQEQLDEVGEALL*
Ga0114958_102394123	3300009684	Freshwater Lake	MTKDEIIEQIQTNEWWPFDRVDPKILQEVMRKDKQQAIDEVGEAL
Ga0114958_102663013	3300009684	Freshwater Lake	MNKEEIVEQVLANTWWPFDRVDPKILQEVMRKDKQDQLDEVGEALL*
Ga0114958_103969211	3300009684	Freshwater Lake	VIEKIQADQWWPFDRVDPKVLQEVMRKDKQQAIDEVGEALL*
Ga0114964_1000933210	3300010157	Freshwater Lake	MTDDEIIEQIQTNQWWPFDRVDPKILQEVMRKDKQEQLDNVEEALL*
Ga0114964_100468532	3300010157	Freshwater Lake	MTKDEIIEQIQANEWWPFDRVDPRILQEVMRKDKQAQLNEVGEALL*
Ga0114964_103601302	3300010157	Freshwater Lake	MTDDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQQAIDEVGEALL*
Ga0114964_104221251	3300010157	Freshwater Lake	MTDEETIAKIQANEWWPFDRVDPKILQEVMRKDKKDQLDEIGEALL*
Ga0114960_101573443	3300010158	Freshwater Lake	MTNEEIIEQIQTNTWWPFDRVDPKILQEAMRKDKKEQLEK
Ga0114960_101583913	3300010158	Freshwater Lake	MTDEEVIAKIQANEWWPFDRVDPRILQEVMRKDKQAQLDEVGEALL*
Ga0114960_105635302	3300010158	Freshwater Lake	MTKDEIIEQVQANQWWPFDRVDPKILQEVMRKDKQQAIDEVGEALL*
Ga0114960_106399613	3300010158	Freshwater Lake	MTDDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQAQLDEVGEALL*
Ga0136644_102590894	3300010334	Freshwater Lake	MTDEEVIEKIQADQWWPFDRVDPKVLQEVMRKDKQQAIDEVGEALL*
Ga0133913_100137196	3300010885	Freshwater Lake	MTDDEIIEQIQTDQWWPFDRVDPKILQQVMRKDKQQAIDEVGEALL*
Ga0133913_1003804620	3300010885	Freshwater Lake	MTKEEIMDKIISDEWWPFDRVDPKVLQEIIHREKQDQLADVGEALL*
Ga0133913_113008105	3300010885	Freshwater Lake	MTNEEIIEQIQANQWWPFDRVDPKILQEVMRKDKKDQLDEIGEALL*
Ga0133913_131194611	3300010885	Freshwater Lake	MTDDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQQTIDEVGEALL*
Ga0151515_1045725	3300011114	Freshwater	MKTKEEIIDKIISNEWWPFDRVDPKILQEIIHRDKQDQLADVGEALL*
Ga0164297_103559671	3300013094	Freshwater	EEIIAKIMANQWWPFDRVDPKILDEVMRRDKQQDLNNTEDALL*
Ga0136642_11279693	3300013285	Freshwater	MNKEEIIEQIQTNKWWPFDRVDPKILQEVVRKDKQQTIDEVGEALL*
Ga0136641_11293283	3300013286	Freshwater	MTDKEIIEQILVDTWWPFDRVDPKILQEVVRKDKQQTIDEVGEALL*
Ga0194047_100384085	3300021354	Anoxic Zone Freshwater	MTDDEIIEQILANTWWPFDRVDPKILQQAMRKDKQQTIDEVGEALL
Ga0194047_101826842	3300021354	Anoxic Zone Freshwater	MNKEEIVEQVLADTWWPFDRVDPKILQEVMRKDKQDQLDEVGEALL
Ga0194047_102035682	3300021354	Anoxic Zone Freshwater	MNKDEIVQQVLDDKWWPFDRVDPKILQEAMRKDKKEQLEKVEEALL
Ga0194048_100377374	3300021519	Anoxic Zone Freshwater	MTNEEIIEQIQTNQWWPFDRVDPKILQEVMRKDKQEQLDNVEEALL
Ga0194048_101048323	3300021519	Anoxic Zone Freshwater	MTNEEIIEQIQANQWWPFDRVDPKILQEIIHREKQDQLADVGEALL
Ga0194048_101431152	3300021519	Anoxic Zone Freshwater	MTDDEIIEQILANTWWPFDRVDPKILQQVMRKDKQQTIDEVGEALL
Ga0194048_102517172	3300021519	Anoxic Zone Freshwater	MTDEEIIEKIQANQWWPFDRVDPKILQQVMKREKQQTIDEVGEALL
Ga0248169_1020913	3300022602	Freshwater	MDTEEIIAKIQANQWWPFDRVDPKILDEVMRRDKQQLTDDIGEALL
Ga0248169_1111866	3300022602	Freshwater	MTDEEIIAKIQANQWWPFDRVDPKILDEVMRRDKQQDLNNTEDALL
Ga0248169_1334991	3300022602	Freshwater	MTDEEIIAKILANQWWPFDRVDPRILQEIQRRDRQQM
Ga0208259_10326872	3300025375	Freshwater	IQANQWWPFDRVDPKILEEVMRRDKQQLTDGIGEALL
Ga0208257_10088141	3300025389	Freshwater	IIAKIQANQWWPFDRVDPKILEEVMRRDKQQLTDGIGEALL
Ga0207954_10695122	3300025606	Freshwater	MTDKEIIAKIQTDQWWPFDRVDPKVLQEVMRKDKQQAIDEVGEALL
Ga0209188_100081919	3300027708	Freshwater Lake	MTKDEIIEQIQTNEWWPFDRVDPKILQEVMRKDKQQAIDEVGEALL
Ga0209188_100330912	3300027708	Freshwater Lake	MNKDEIVQQVLDDKWWPFDRVDPKILQEAMRKDKKEQLDEVEEALL
Ga0209188_100863810	3300027708	Freshwater Lake	MTKDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQDQLNEVGEALL
Ga0209188_10716932	3300027708	Freshwater Lake	MNKEEIVERVLANTWWPFDRVDPKILQEVMRKDKQDQLDEVGEALL
Ga0209188_10890084	3300027708	Freshwater Lake	MTKDEIIEQVQANQWWPFDRVDPKILQEVMRKDKQQAIDEVGEALL
Ga0209188_11510363	3300027708	Freshwater Lake	MTDDEIIEQIQTNQWWPFDRVDPKILQQVMRKDKQQAIDEVGEALL
Ga0209188_13065771	3300027708	Freshwater Lake	MTDDEIIEQIQTNKWWPFDRVDPKILQEVMRKDKQDKLNEVGEALL
Ga0209499_10396547	3300027712	Freshwater Lake	MNKDEIVQQVLDDKWWPFDRVDPKILQEAMRKDKKQQLDKVEEALL
Ga0209499_10830632	3300027712	Freshwater Lake	MTDEEVIEKILANNWWPFDRVDPKLLQEIMRKDKQAQLNKLGEALL
Ga0209499_13136821	3300027712	Freshwater Lake	MTDDEIIEQIQTNQWWPFDRVDPKILQEVMRKDKQDKLNEVGEALL
Ga0209085_10313607	3300027741	Freshwater Lake	MTDDEIIEQILANNWWPFDRVDPKILQQVMRKDKQQTIDEVGEALL
Ga0209085_10808265	3300027741	Freshwater Lake	MTKDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQAQLDEVG
Ga0209085_10925641	3300027741	Freshwater Lake	EQIQTNEWWPFDRVDPKILQEVMRKDKQQAIDEVGEALL
Ga0209189_10162947	3300027747	Freshwater Lake	MTKDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQAQLDEVGEALL
Ga0209084_10358045	3300027749	Freshwater Lake	MTNEEIIEQIQTNTWWPFDRVDPKILQEAMRKDKKEQLEKVEEALL
Ga0209084_10823422	3300027749	Freshwater Lake	MTDDEIIEQILANNWWPFDCVDPKILQQAMRKSKQDQLNEVGEALL
Ga0209084_11765974	3300027749	Freshwater Lake	QIQTNKWWPFDRVDPKILQEIMRKNKQQTIDEVGEALL
Ga0209084_12777392	3300027749	Freshwater Lake	MTDEEVIEKIQADQWWPFDRVDPKVLQEVMRKDKQQAIDEVGEALL
Ga0209084_13543653	3300027749	Freshwater Lake	MNKDEIVQQVLNDKWWPFDRVDPKILQEAMRKDKKEQLDKVEEALL
Ga0209829_100168968	3300027777	Freshwater Lake	MTKDEIIEQIQANEWWPFDRVDPRILQEVMRKDKQAQLNEVGEALL
Ga0209829_103905372	3300027777	Freshwater Lake	MNKDEIVQQVLDDKWWPFDRVDPKILQEAMRKDKKEQLDKVEEALL
Ga0304729_11534562	3300028392	Freshwater Lake	MTDDEIIEKIQANQWWPFDRVDPRILQEVMRKDKQQT
Ga0304729_11815523	3300028392	Freshwater Lake	MKKDEIIEELLNDKWWPFDRVDPKILEELIQKEKQQKINEIGEALL
Ga0304728_11563723	3300028393	Freshwater Lake	MEITMTDDEIIEQILANNWWPFDCVDPKILQQAMRKSKQDQLNEVGEALL
Ga0316226_10422123	3300032562	Freshwater	MTDEEIIAKIQANQWWPFDRVDPKILEEIQRRDKQQLLEEAGDALL
Ga0316228_10981931	3300032579	Freshwater	MTDEEIIAKILANQWWPFDRVDPRILQEIQCRDRQQMLDDT
Ga0316232_10373431	3300032605	Freshwater	TDEEIIAKIQANQWWPFDRVDPKILEEIQRRDKQQLLEEAGDALL
Ga0316230_11459861	3300032668	Freshwater	MTDEEIIAKILANQWWPFDRVDPRILQEIQCRDRQQMLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091244

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences