Metagenome Family F091206

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091206
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	60 residues
Representative Sequence	MNKLTVSQKALHELQRKAKEANPSPKPQKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSK
Number of Associated Samples	58
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	30.84 %
% of genes near scaffold ends (potentially truncated)	30.84 %
% of genes from short scaffolds (< 2000 bps)	85.05 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.617 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (36.449 % of family members)
Environment Ontology (ENVO)	Unclassified (48.598 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.402 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.78% β-sheet: 0.00% Coil/Unstructured: 82.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF11154	DUF2934	7.48
PF02502	LacAB_rpiB	4.67
PF05239	PRC	3.74
PF16884	ADH_N_2	3.74
PF00300	His_Phos_1	3.74
PF00072	Response_reg	2.80
PF09364	XFP_N	2.80
PF10458	Val_tRNA-synt_C	1.87
PF00543	P-II	0.93
PF00216	Bac_DNA_binding	0.93
PF01878	EVE	0.93
PF00690	Cation_ATPase_N	0.93
PF06144	DNA_pol3_delta	0.93
PF07581	Glug	0.93
PF05359	DUF748	0.93
PF00871	Acetate_kinase	0.93
PF04964	Flp_Fap	0.93
PF13006	Nterm_IS4	0.93
PF12779	WXXGXW	0.93
PF13701	DDE_Tnp_1_4	0.93
PF00365	PFK	0.93
PF00034	Cytochrom_C	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	4.67
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.93
COG0282	Acetate kinase	Energy production and conversion [C]	0.93
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	0.93
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.93
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.93
COG1466	DNA polymerase III, delta subunit	Replication, recombination and repair [L]	0.93
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	0.93
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	0.93
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	0.93
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	0.93
COG3426	Butyrate kinase	Energy production and conversion [C]	0.93
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.62 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.62 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.62 %
Unclassified	root	N/A	37.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	36.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	34.58 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.93 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	15.89 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	4.67 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	1.87 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.93 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.93 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.93 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	15.89 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4.67 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1.87 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Opitutae bacterium Tous-C1TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	15.89 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.87 %
Lacipirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae	0.93 %
Methylomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Opitutae bacterium Tous-C1TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	15.89 %
Bythopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Bythopirellula	0.93 %
Methylomicrobium lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium lacus	0.93 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Opitutae bacterium Tous-C1TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	15.89 %
Bythopirellula polymerisocia	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Bythopirellula → Bythopirellula polymerisocia	0.93 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	0.93 %
Methylomicrobium lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium lacus	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.38 %
Opitutae bacterium Tous-C1TDCM	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	15.89 %
Verrucomicrobium sp. GAS474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	0.93 %
Bythopirellula polymerisocia	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Bythopirellula → Bythopirellula polymerisocia	0.93 %
Methylomicrobium lacus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium lacus	0.93 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_100824994	Not Available	650	Open in IMG/M
3300004092\|Ga0062389_103519477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	587	Open in IMG/M
3300009500\|Ga0116229_10014094	All Organisms → cellular organisms → Bacteria → Proteobacteria	11165	Open in IMG/M
3300009500\|Ga0116229_10123624	All Organisms → cellular organisms → Bacteria	2295	Open in IMG/M
3300009500\|Ga0116229_11261206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	588	Open in IMG/M
3300009500\|Ga0116229_11351791	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Lacipirellulaceae → Bythopirellula → Bythopirellula polymerisocia	565	Open in IMG/M
3300009651\|Ga0105859_1166855	Not Available	631	Open in IMG/M
3300009709\|Ga0116227_10181856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	1642	Open in IMG/M
3300009787\|Ga0116226_10451239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1306	Open in IMG/M
3300014168\|Ga0181534_10358977	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300014169\|Ga0181531_10817432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	582	Open in IMG/M
3300014201\|Ga0181537_10047103	All Organisms → cellular organisms → Bacteria	2928	Open in IMG/M
3300014201\|Ga0181537_10922870	Not Available	591	Open in IMG/M
3300014489\|Ga0182018_10015691	All Organisms → cellular organisms → Bacteria	5172	Open in IMG/M
3300014489\|Ga0182018_10040709	Not Available	2893	Open in IMG/M
3300014492\|Ga0182013_10297485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	907	Open in IMG/M
3300014492\|Ga0182013_10510772	Not Available	624	Open in IMG/M
3300014492\|Ga0182013_10603657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	559	Open in IMG/M
3300014493\|Ga0182016_10056173	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3023	Open in IMG/M
3300014493\|Ga0182016_10214089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1233	Open in IMG/M
3300014493\|Ga0182016_10485461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	716	Open in IMG/M
3300014493\|Ga0182016_10708664	Not Available	565	Open in IMG/M
3300014495\|Ga0182015_10128435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1736	Open in IMG/M
3300014495\|Ga0182015_11012357	Not Available	515	Open in IMG/M
3300014501\|Ga0182024_10003607	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	36619	Open in IMG/M
3300014501\|Ga0182024_11355253	All Organisms → cellular organisms → Bacteria → PVC group	821	Open in IMG/M
3300014501\|Ga0182024_11535804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	758	Open in IMG/M
3300014501\|Ga0182024_11866391	Not Available	670	Open in IMG/M
3300014838\|Ga0182030_10031898	All Organisms → cellular organisms → Bacteria	9230	Open in IMG/M
3300014838\|Ga0182030_10041700	All Organisms → cellular organisms → Bacteria	7617	Open in IMG/M
3300014838\|Ga0182030_11161908	Not Available	663	Open in IMG/M
3300014838\|Ga0182030_11400501	Not Available	583	Open in IMG/M
3300015206\|Ga0167644_1015211	All Organisms → cellular organisms → Bacteria	3588	Open in IMG/M
3300021478\|Ga0210402_10340749	Not Available	1390	Open in IMG/M
3300025627\|Ga0208220_1138683	Not Available	627	Open in IMG/M
3300025634\|Ga0208589_1150217	Not Available	530	Open in IMG/M
3300027648\|Ga0209420_1054822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1190	Open in IMG/M
3300027860\|Ga0209611_10065120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	2706	Open in IMG/M
3300027860\|Ga0209611_10176828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	1325	Open in IMG/M
3300027895\|Ga0209624_10479241	Not Available	829	Open in IMG/M
3300028552\|Ga0302149_1078100	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	852	Open in IMG/M
3300028776\|Ga0302303_10075066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1270	Open in IMG/M
3300028779\|Ga0302266_10095772	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300028780\|Ga0302225_10262230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	823	Open in IMG/M
3300028780\|Ga0302225_10503694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	565	Open in IMG/M
3300028859\|Ga0302265_1129794	Not Available	793	Open in IMG/M
3300028873\|Ga0302197_10373374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	634	Open in IMG/M
3300028909\|Ga0302200_10452833	Not Available	591	Open in IMG/M
3300029907\|Ga0311329_10667807	Not Available	679	Open in IMG/M
3300029907\|Ga0311329_10707814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	653	Open in IMG/M
3300029911\|Ga0311361_10431874	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300029911\|Ga0311361_10471058	Not Available	1270	Open in IMG/M
3300029911\|Ga0311361_11134971	Not Available	634	Open in IMG/M
3300029914\|Ga0311359_10036905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5447	Open in IMG/M
3300029914\|Ga0311359_10224838	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300029914\|Ga0311359_10345147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1204	Open in IMG/M
3300029914\|Ga0311359_10413171	Not Available	1060	Open in IMG/M
3300029914\|Ga0311359_10720991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	712	Open in IMG/M
3300029914\|Ga0311359_11179325	Not Available	503	Open in IMG/M
3300029915\|Ga0311358_10195762	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300029915\|Ga0311358_10523108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	918	Open in IMG/M
3300029915\|Ga0311358_10551525	Not Available	884	Open in IMG/M
3300029922\|Ga0311363_10724205	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300029922\|Ga0311363_11322729	Not Available	595	Open in IMG/M
3300029939\|Ga0311328_10707814	Not Available	681	Open in IMG/M
3300029951\|Ga0311371_12310301	Not Available	556	Open in IMG/M
3300029952\|Ga0311346_10484550	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300029952\|Ga0311346_10579683	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1012	Open in IMG/M
3300029952\|Ga0311346_11086950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	636	Open in IMG/M
3300029954\|Ga0311331_10646400	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300029955\|Ga0311342_10836611	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300029955\|Ga0311342_11339197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	507	Open in IMG/M
3300030007\|Ga0311338_11487029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	626	Open in IMG/M
3300030011\|Ga0302270_10510682	Not Available	626	Open in IMG/M
3300030041\|Ga0302274_10129409	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300030041\|Ga0302274_10282988	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300030041\|Ga0302274_10338430	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300030044\|Ga0302281_10302889	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	637	Open in IMG/M
3300030503\|Ga0311370_10502985	Not Available	1484	Open in IMG/M
3300030503\|Ga0311370_11167102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	838	Open in IMG/M
3300030503\|Ga0311370_11399231	Not Available	740	Open in IMG/M
3300030503\|Ga0311370_11510873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300030503\|Ga0311370_12473576	Not Available	500	Open in IMG/M
3300030508\|Ga0302185_10214097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	655	Open in IMG/M
3300030518\|Ga0302275_10338044	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	811	Open in IMG/M
3300030737\|Ga0302310_10317173	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	872	Open in IMG/M
3300031234\|Ga0302325_10489094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1866	Open in IMG/M
3300031234\|Ga0302325_12925007	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031236\|Ga0302324_100198205	All Organisms → cellular organisms → Bacteria	3209	Open in IMG/M
3300031236\|Ga0302324_102888190	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300031236\|Ga0302324_103058154	Not Available	555	Open in IMG/M
3300031236\|Ga0302324_103428113	Not Available	516	Open in IMG/M
3300031258\|Ga0302318_10704277	Not Available	508	Open in IMG/M
3300031259\|Ga0302187_10150945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomicrobium → Methylomicrobium lacus	1257	Open in IMG/M
3300031524\|Ga0302320_11034675	Not Available	866	Open in IMG/M
3300031524\|Ga0302320_11996433	Not Available	544	Open in IMG/M
3300031525\|Ga0302326_10994111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1180	Open in IMG/M
3300031525\|Ga0302326_11506599	Not Available	901	Open in IMG/M
3300031525\|Ga0302326_13040555	Not Available	571	Open in IMG/M
3300031708\|Ga0310686_108246504	Not Available	979	Open in IMG/M
3300031708\|Ga0310686_118570629	All Organisms → cellular organisms → Bacteria	2308	Open in IMG/M
3300031788\|Ga0302319_10499265	Not Available	1307	Open in IMG/M
3300031788\|Ga0302319_10659589	Not Available	1072	Open in IMG/M
3300031788\|Ga0302319_11900704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM	510	Open in IMG/M
3300031837\|Ga0302315_10088108	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300032579\|Ga0316228_1025622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2650	Open in IMG/M
3300033887\|Ga0334790_069516	Not Available	1232	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.52%
Host-Associated	Host-Associated	7.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.98%
Plants	Host-Associated → Plants	7.48%
Aquatic	Environmental → Aquatic	6.54%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	59.81%
Soil	Environmental → Terrestrial → Soil	26.17%
Peat Moss	Host-Associated → Plants → Peat Moss	7.48%
Freshwater	Environmental → Aquatic → Freshwater	6.54%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	59.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.69%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	7.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.61%
Loam	Environmental → Terrestrial → Soil → Loam	1.87%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	59.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	18.69%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	7.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.87%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	36.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	19.63%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	10.28%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	7.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.74%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	3.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.74%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.80%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.93%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030508	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300032579	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18021	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1008249941	3300004082	Bog Forest Soil	MNKLTVSQKALHELQRKAKEANPAAKPPKRDNTFSKSRDIREDRDTRQMKTTHKSETFPHSK*
Ga0062389_1035194772	3300004092	Bog Forest Soil	MNKLTVSQKALHELQRKAKEANPGPKPQKRDNTFSQSRDVREDRDTRQMKTTHKPETFPHSK*
Ga0116229_100140944	3300009500	Host-Associated	MNKLTVSQKALHELQRKAKDANPGPKPPKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSKNNLSYEN*
Ga0116229_101236243	3300009500	Host-Associated	MTTKPTISQKALRQRQRQAKEAPPKPPKRENTFSQSRDIREDRDTRQIKNTHTAETFPHAK*
Ga0116229_112612061	3300009500	Host-Associated	HEQQRKAKEAQPDPKPPRRENTFSQSRDIREDRDTRQIKNSHKAETFPHAK*
Ga0116229_113517912	3300009500	Host-Associated	MSNKLTVSQKALHEQLRKAKEAHPDPKPPKRENTFSQSRDIREDRDTRQIKNTHKAETF
Ga0105859_11668552	3300009651	Permafrost Soil	MNKLTVSQKALHEKERKAKEAIPTPKAQKRDNTFSQSRDNREDRDTRQTKTDQSQTFPHTP*
Ga0116227_101818562	3300009709	Host-Associated	MNKLTVSQKALHTQQRKAKESHPDPKPPKRENTFSQSRDIREDRDTRQIKNTHQAETFPPAK*
Ga0116226_104512391	3300009787	Host-Associated	MTNKLTVSQKALHEQQRKAKEAHPDLKPARRENTFSQSRDIREDRDTRQIKNTHKAETFPHAKQLPL*
Ga0181534_103589771	3300014168	Bog	MNKLTVSQKALNQLQRKAKEAHPDPKPQKRDNTFSKSRDNREDRDTRQTKTDQSQTF
Ga0181531_108174322	3300014169	Bog	MNKLTVSQKALHELQRKAKEANPGPKPQKRDNTFSQSRDVREDRDTRQMKTTHNSETFPHSK*
Ga0181537_100471033	3300014201	Bog	MNKLTVSQKALNQLQRKAKEAHPDPKPQKRDNTFSKSRDNREDRDTRQTKTDQSQTFPHTL*
Ga0181537_109228702	3300014201	Bog	MNKLTVSQKALHELQRKAKEANPAPKPQKRDNTFSQSRDVREDRDTRQMKTTHKSGTFPHSK*
Ga0182018_100156912	3300014489	Palsa	MNKPTVSQKALHEKERKAKEALPSQKPQKRDNIFSQSRDTREDRDTRQMKTTHKSQTFPHAL*
Ga0182018_100407094	3300014489	Palsa	MNKPTISQKALHEKERKAKEALPSPKPEKRDKTFSQSRDNREDRDTRQTKTDQAQTFPHAV*
Ga0182013_102974851	3300014492	Bog	IMNKLTVSQKALHELQRKAKAANPKPKPQKRDNTFSLSRDVREDRDTRQMKTTHKSETFPHSK*
Ga0182013_105107722	3300014492	Bog	MNKPTVSQKALHEKERKAKEATPNPKPEKRDNTFSQSRDIREDRATRQIKTTHKL
Ga0182013_106036571	3300014492	Bog	QKALHELQRKAQEAHPNPKSKKRDNIFSKSRDICEDRDMRQTKTDQSQTFTHSL*
Ga0182016_100561735	3300014493	Bog	MNKLTVSQKALHELQRKAKAANPKPKPQKRDNTFSLSRDVREDRDTRQMKTTHKSETFPHSK*
Ga0182016_102140891	3300014493	Bog	LTVSQKALHELQRKAKEANPGPKPPKRDNTFSQSRDVRENRDTRQMKTTHKSETFPHSK*
Ga0182016_104854611	3300014493	Bog	MNKLTVSQKALHELQRKAKEANPAPRPPKRDNTFSQSRDVREDRDMRQMKTTHKSETFPHSK*
Ga0182016_107086641	3300014493	Bog	MNKPTVFQKALNQLRRKAKEATPGPKPQKRDNIFSQSRDIREDRDTRQMKTTHKPQTSQTIPQAW*
Ga0182015_101284353	3300014495	Palsa	MNKPTISQKALNQLQRKAKEAHPDPKPLKRDNTFSQSRDNREDRDTRQTKTDQSQTFPHTL*
Ga0182015_110123572	3300014495	Palsa	MNKPTISQKALHEKERKAKEALPSPKPEKRDKTFSQSRDNREDRDTRQT
Ga0182024_1000360732	3300014501	Permafrost	MNKLTVSQKALNQLQRKAKEAHPDPKPHKRDNTFSQSRDNREDRDTRQTKTDQSQTFPHTL*
Ga0182024_113552531	3300014501	Permafrost	MNKPTVSQKALHEKERKAKEAIPLPKPHKRDNTFSQSRDNREDRDTRQTKTDQSQTFPHAP*
Ga0182024_115358041	3300014501	Permafrost	MNKLTVYQKALHQLQRKAKEANPGPKPQKRDNTFSQSRDVREDRDTRQMK
Ga0182024_118663912	3300014501	Permafrost	MNKPTISQKALHEKERKAKEAIPTPKPQKRVNTFSQSRDNREDRDTRQTKTDQSQTF
Ga0182030_1003189814	3300014838	Bog	MNKLTVSQKALHELQRKAKEANPSPKPQKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSK*
Ga0182030_100417002	3300014838	Bog	MNKPTVSQKALNQRQRKAKETNPDPKPPKRDNTFSQSRDIREDRDMRQTKTDQPRTLPHVN*
Ga0182030_111619082	3300014838	Bog	MNKPTVSQKALHEKERKAKEATPNPKPEKRDNTFSQSRDIREDRGTRRGKTTHLSQTLPHTL*
Ga0182030_114005012	3300014838	Bog	MNKPTISQKALHALKRIALESIPPPKSPKRDNTFSQSRDTREDRATRQVKTTHTPQTFPHAAK*
Ga0167644_10152114	3300015206	Glacier Forefield Soil	MNKPTISQKALHEKERKAKEATSIPKPHKRDNTFSQSRDNREDRDTRQTKTDQSQTFPHTL*
Ga0210402_103407492	3300021478	Soil	MNKPTVSQKALKLLERKAKEANPGPKPQKRDNTFSKSRDVREDRDTRQTKTDQSQTFPHA
Ga0208220_11386833	3300025627	Arctic Peat Soil	MNKPTISQKALKQRIRKAKEAAPPPTPQMRDDIFSRSRDLREDRDTRQVKTGHKPQTFPHVP
Ga0208589_11502171	3300025634	Arctic Peat Soil	MNKPTVSQKALKLLERKAKESNPGPQSQKRDNTFSKSRDVREDRDTRQTKTDQSQTFPHA
Ga0209420_10548222	3300027648	Forest Soil	MKPIINCTGTPFLMNKLTVSQKALHELQRKAKEATPAPKPPKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSK
Ga0209611_100651203	3300027860	Host-Associated	MNKLTVSQKALHELQRKAKDANPGPKPPKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSKNNLSYEN
Ga0209611_101768283	3300027860	Host-Associated	MTTKPTISQKALRQRQRQAKEAPPKPPKRENTFSQSRDIREDRDTRQIKNTHTAETFPHA
Ga0209624_104792411	3300027895	Forest Soil	MNKPTVSQKALHEKERKAKESIPTPKPQKRVNIFSQSRDNREDRDTRQTKTEQSQTFPHS
Ga0302149_10781002	3300028552	Bog	MNKPTISQKALHLLQRKAKEAHPDPKPSKRENIFSQSRDVREDRDTRQMKTTHKSETFPHSK
Ga0302303_100750662	3300028776	Palsa	MNKLTVSQKALHEMQRKAKQANPAPKPPKRDNTFSQSRDIREDRDTRQMKTAHKSETFPHSK
Ga0302266_100957722	3300028779	Bog	MNKPTISQKALHQLQRKAKEAMPSPKPEKRDNTFSQSRDLREDRDTRQTKTDQSQTFPHS
Ga0302225_102622301	3300028780	Palsa	NKLTVSQKALHEMQRKAKQANPAPKPPKRDNTFSQSRDIREDRDTRQMKTAHKSETFPHS
Ga0302225_105036942	3300028780	Palsa	MNKLTVSQKALHELQRKAKQANPTPKPPKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSK
Ga0302265_11297942	3300028859	Bog	MNKLTVSQKALHELQRKAKEAHPDPKPKKRDNTFSQSRDNREDRDTRQMKTDQPQTFSHP
Ga0302197_103733741	3300028873	Bog	MNKLTVSQKALHELERKAKEANPGPKPQKRDNTFSQSRDVREDRDTRQMKTTHKS
Ga0302200_104528333	3300028909	Bog	MTNKLTVSQKALNQQMRKAKEANPSPKPKKRDNTFSQSRDVHEDRDTRQTKTDQSKTFPHGK
Ga0311329_106678071	3300029907	Bog	MNKPTVSQKALRQLEREALEATAVSKPEKRARIFSQSRDMWEDRARRQIKTTMNGVS
Ga0311329_107078142	3300029907	Bog	MNKLTVSQKALHEQQRKAKEANPDPKPQKRDNTFSQSRDVREDRDTRQMKTTRKSETFPHSK
Ga0311361_104318743	3300029911	Bog	MNKPTISQKALNQRKRKAEEANPSPKPKKRDNTFSQSRDIREDRDMRQTKTDEPRTLPHP
Ga0311361_104710582	3300029911	Bog	MKKLTVSQKALGELRRKAKEANPAPKPPKRDNTFSQSREDRDTRQMKTTHISETFPHAK
Ga0311361_111349712	3300029911	Bog	MNKPTVSQKALNQRKRKAAEANPSPKPKKRDNTFSQSRDIREDRDMRQTKTDQSRTLPHL
Ga0311359_100369058	3300029914	Bog	IMNKPTISQKALHQLQRKAREAIPSPKPEKRDNTFSQSRDLREDRDTRQTKTDQSQTFPHSL
Ga0311359_102248382	3300029914	Bog	MNKPTISQKALNQRKRKAEEANPSPKPKKRDNTFSQSRDIREDRDMRQTKTDEPRTLTHP
Ga0311359_103451472	3300029914	Bog	MNKLTVSQKALHELQRKAKEAHPDPKPQKRDNIFSKSRDIREDRDTRQTKTDQSRTISHP
Ga0311359_104131713	3300029914	Bog	MNKPTISQKALHEKERKAKEAVPSPKPSKRDNTFSQSRDNREDRDTRQTKTDQSLTF
Ga0311359_107209911	3300029914	Bog	MNKLTVSQKALHELERKAKEANPGPKPQKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSK
Ga0311359_111793251	3300029914	Bog	MNKPTVSQKALHEKERKAKEAIPSPKPEKRDNTFSQSRDIREDRGTRQIKTTHSSQTLPHTL
Ga0311358_101957622	3300029915	Bog	MNKLTVSQKALHELQRKAKEANPAPKPPKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSK
Ga0311358_105231083	3300029915	Bog	IMNKLTVSQKALHELQRKAKEANPGPKPLKRDNIFSQSRDVREDRDTRQMKTNHKSERFPHSK
Ga0311358_105515252	3300029915	Bog	MNKPTVSQKALNQLKRIALAASPPPAAPKRDNTFSQSRDTREDRATRQVKTTHKPQTFPHAAK
Ga0311363_107242051	3300029922	Fen	MNKPTISQKALSQRKRKAEEANPSPKPKKRDNTFSQSRDIREDRDMRQTKTDEPRTLPHP
Ga0311363_113227292	3300029922	Fen	MKKLTVSQKALGELRRKAKEANPAPKPPKRDNTFSQSRDVREDRDTRQMKTTHISETFPHAK
Ga0311328_107078142	3300029939	Bog	MNKPTISQKALHALKRIALESIPPPKSPKRDNTFSQSRDTREDRATRQVKTTHTPQTFPH
Ga0311371_123103012	3300029951	Palsa	MNKPTVSQKALSQRKRKAEEANPSPKPKKRDNTFSQSRDIREDRDMRQTKTDEPRTLPHS
Ga0311346_104845503	3300029952	Bog	KALNQRKRKAEEANPSPKPPKRDNTFSQSRDIREDRDMRQTKTDEPRTLPHPL
Ga0311346_105796831	3300029952	Bog	MKKLTVSQKALGELRRKAKEANPAPKPPKRDNTFSQSRDVREDRDTRQMKTTH
Ga0311346_110869501	3300029952	Bog	MNKLTISQKALHEQLRKAKEANPAPKPPKRDNTFSQSRDIREDRATRQVKTTQKAKTFPHSK
Ga0311331_106464003	3300029954	Bog	QKALHLLQRKAKEAHPDPKPSKRENIFSQSRDVREDRDTRQMKTTHKSETFPHSK
Ga0311342_108366112	3300029955	Bog	MNKLTVSQKALHELQRKAKEANPAPKPPKRDNTFSQSRDVREDRDTRQMKTIHKSETFPHSK
Ga0311342_113391971	3300029955	Bog	NKPTISQKALHALKRIALESIPPPKSPKRDNTFSQSRDTREDRATRQVKTTHTPQTFPHAAK
Ga0311338_114870293	3300030007	Palsa	QRKRKTEEANPSPKPKKRDNTFSQSRDIREDRDTRQTKTDKPRTLPHAI
Ga0302270_105106822	3300030011	Bog	ALNQQMRKAKEANPSPKPKKRDNTFSQSRDVHEDRDTRQTKTDQSKTFPHGK
Ga0302274_101294092	3300030041	Bog	MNKLTVSQKALHMLQRKAEEASPGPKPQKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHLK
Ga0302274_102829883	3300030041	Bog	TISQKALNQRKRKAEEANPSPKPKKRDNTFSQSRDIREDRDMRQTKTDEPRTLPHPL
Ga0302274_103384302	3300030041	Bog	MNKLTVSQKALHELQRKAKQANPDPKPPKRDNTFSQSRDVREDRDTHQMKTTHQSETFPHSK
Ga0302281_103028892	3300030044	Fen	MNKPTISQKALHALKRIALESIPPPKSPKRDNTFSQSRDTREDRATRQVKTTHTPQTFPHAAK
Ga0311370_105029851	3300030503	Palsa	MNKPTISQKALHEKERKAKEAIPTPKPHKRDKTFSQSRDNREDRDTRQ
Ga0311370_111671022	3300030503	Palsa	MNKLTVSQKALHELQRKAKQANPAPKPPKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSK
Ga0311370_113992311	3300030503	Palsa	MNKPTVSQKALHQLERKAKEATPSPKPQKRDNTFSQSRDTREDRDTRQMKTTHKSQTFPHTL
Ga0311370_115108732	3300030503	Palsa	MNKPTVSQKALHEKERKAKEAIPTPKPQKRVNTFSQSRDNREDRDTRQTKTDQSQTFPHT
Ga0311370_124735762	3300030503	Palsa	MNKLTVSQKALKERKRKAAEANPAPKPKKRDNIFSQSRDIREDRDTRQTKTDKPHAYPRA
Ga0302185_102140972	3300030508	Bog	LFMNKLTVSQKALHELQRKAKEAHPDPKPKKRDNTFSQSRDNREDRDTRQMKTDQPQTFSHPL
Ga0302275_103380442	3300030518	Bog	MNKPTVSQKALNQRKRKAAEANPSPKPKKRDNTFSQSRDIREDRDMRQTKTDEPRTLPHP
Ga0302310_103171731	3300030737	Palsa	MNKLTVSQKALHELQRKAKQANPGPKPQKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSK
Ga0302325_104890942	3300031234	Palsa	MNKPTVSQKALHEKERKAKEATPAPKPQKRDNTFSQSRDNREDRDTRQTKTDQSQTFPHT
Ga0302325_129250071	3300031234	Palsa	ETNESTMNKLTVSQKELHQLERKAKEATPTPKPQKRDNTFSQSRDTREDRDTRQMKTTHKAQTFPHTL
Ga0302324_1001982053	3300031236	Palsa	MNKLTVSQKALHQLEREAREANPTPKPKKRDNTFSQSRDLREDRDTRQTKTDQSKTFPHT
Ga0302324_1028881902	3300031236	Palsa	MNKPTVSQKALNQRKRKAEEANPSPKPKKRDNTFSQSRDIREDRDTRQTKTDAPRTLPHV
Ga0302324_1030581542	3300031236	Palsa	MNKPTVSQKALHEKERKAKEAIPGPKPQKRDNTFSQSRDTREDRDTRQMKTAHKSQTFPHTL
Ga0302324_1034281132	3300031236	Palsa	MNKLTVSQKALHELQRKANQANPAPKPPKRDNTFSQSRDVREDRDTRQMKTTHKSE
Ga0302318_107042771	3300031258	Bog	MNKPTISQKALHEKERKAKEAIPTTKPQKRDNTFAQSRDNREDRDIRQTKTDQSQTFPHA
Ga0302187_101509454	3300031259	Bog	MNKLTVSQKALHELQRKAKEAHPDPKPKKRDNTFSQSRDNREDRDTRQMKTD
Ga0302320_110346752	3300031524	Bog	MNKPTISQKALHEKERKAKEAMPAPKPAKRDNTFSQSRDNREDRDIRQTKTDQSQTFPHA
Ga0302320_119964331	3300031524	Bog	PTVSQKALNQRQRKSKETNPDPKPPKRDNTFSKSRDIREDRDTRQTKTDLSRTLPHVN
Ga0302326_109941112	3300031525	Palsa	MNKLTVSQKALHELQRKAKQANPAPKPTKRDNTFSQSRDVREDRDTRQMKTTHKSETFPHSK
Ga0302326_115065992	3300031525	Palsa	MNKPTVSQKALHERERKAKEAIPSPKPPKRANTFSQSRDNREDRDTRQTKTDQSQTFPHA
Ga0302326_130405551	3300031525	Palsa	NLIHPMNKLTVSQKALHQLEREAREANPTPKPKKRDNTFSQSRDLREDRDTRQTKTDQSKTFPHTP
Ga0310686_1082465042	3300031708	Soil	MNKPTISQKALNQLQRKAKEAHPDPKPHKRDNTFSQSRDNREDRDTRQTKMDQSQTFPHT
Ga0310686_1185706293	3300031708	Soil	MNKLTVSQKALNQLQRKAKAAHPEPKPQKRDNTFSKSRDNREDRDTRQTKTDQSQTFPHT
Ga0302319_104992653	3300031788	Bog	MNKLTVSQKALHEQQRKAKEANPDPKPQKRDNTFSQSRDVREDRDTRQMKTTR
Ga0302319_106595893	3300031788	Bog	MNKPTISQKALHEKERKAKEAVPSPKPSKRDNTFSQSRDNREDRDTRQTKTDQSQTFPHA
Ga0302319_119007042	3300031788	Bog	RRTLLIMNKLTISQKALHEQLRKAKEANPAPKPPKRDNTFSQSRDIREDRATRQVKTTQKAKTFPHSK
Ga0302315_100881081	3300031837	Palsa	MNKLTVSQKALHELQRKATEANPAPKPPKRDNTFSQSRDVREDRDTRQMKTTHKSESF
Ga0316228_10256224	3300032579	Freshwater	MNKPTVSQKALRLLERKAKEAIPSPKPRKRDNIFSQSRDTREDRETRQMKTIHKPKTVSHAL
Ga0334790_069516_170_355	3300033887	Soil	MNKPTVSQKALHEKERKAKEATPTPKPQMRDNTFSQSRDNREDRDTRQTKTDQSQTFPHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091206

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences