Metagenome / Metatranscriptome Family F091161

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091161
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	64 residues
Representative Sequence	MSARLLPAVRELFGQHPRAARLSPEQVAGLLWILCYAADDEGPPNPYEVADALEVLDVERGAAA
Number of Associated Samples	44
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.52 %
% of genes near scaffold ends (potentially truncated)	19.63 %
% of genes from short scaffolds (< 2000 bps)	75.70 %
Associated GOLD sequencing projects	44
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.682 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand (71.963 % of family members)
Environment Ontology (ENVO)	Unclassified (71.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (90.654 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.65% β-sheet: 0.00% Coil/Unstructured: 54.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.4.5.0: automated matches	d5nbca_	5nbc	0.69448
a.4.5.0: automated matches	d3mwma_	3mwm	0.68157
a.4.5.0: automated matches	d4lmya_	4lmy	0.68028
a.4.5.48: F93-like	d2co5a1	2co5	0.674
a.4.5.0: automated matches	d2xiga_	2xig	0.66668

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF03288	Pox_D5	10.28
PF13481	AAA_25	8.41
PF01381	HTH_3	4.67
PF09250	Prim-Pol	4.67
PF08706	D5_N	3.74
PF10263	SprT-like	1.87
PF13560	HTH_31	1.87
PF12728	HTH_17	0.93
PF08592	Anthrone_oxy	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3378	DNA primase, phage- or plasmid-associated	Mobilome: prophages, transposons [X]	10.28

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.36 %
Unclassified	root	N/A	33.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.68 %
Unclassified	root	N/A	33.64 %
Viruses	superkingdom	All Organisms → Viruses	4.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.68 %
Unclassified	root	N/A	33.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	58.88 %
Unclassified	root	N/A	33.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.87 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58.88 %
Unclassified	root	N/A	33.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.87 %

Name	Rank	Taxonomy	Distribution
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	34.58 %
Unclassified	root	N/A	33.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.87 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.93 %

Name	Rank	Taxonomy	Distribution
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	34.58 %
Unclassified	root	N/A	33.64 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	34.58 %
Unclassified	root	N/A	33.64 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.87 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.64 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	12.15 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	10.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	3.74 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.87 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.64 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	12.15 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	10.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.67 %
Rubrobacter aplysinae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter aplysinae	3.74 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.87 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805012\|FNTS067_GJ87FRN01AITW8	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300000750\|JGI12272J11983_1156268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1401	Open in IMG/M
3300000827\|JGI12396J12026_1073835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1745	Open in IMG/M
3300005506\|Ga0068912_11083230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1534	Open in IMG/M
3300009789\|Ga0126307_10727257	Not Available	801	Open in IMG/M
3300012042\|Ga0136627_1011078	All Organisms → Viruses → Predicted Viral	3419	Open in IMG/M
3300012042\|Ga0136627_1036107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1793	Open in IMG/M
3300012042\|Ga0136627_1036648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1779	Open in IMG/M
3300012042\|Ga0136627_1042583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1633	Open in IMG/M
3300012042\|Ga0136627_1056768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1385	Open in IMG/M
3300012042\|Ga0136627_1070271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1223	Open in IMG/M
3300012045\|Ga0136623_10010552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	3786	Open in IMG/M
3300012045\|Ga0136623_10018602	All Organisms → Viruses → Predicted Viral	2942	Open in IMG/M
3300012045\|Ga0136623_10267302	Not Available	727	Open in IMG/M
3300012045\|Ga0136623_10344071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	631	Open in IMG/M
3300012045\|Ga0136623_10444881	Not Available	548	Open in IMG/M
3300012045\|Ga0136623_10515088	Not Available	501	Open in IMG/M
3300012091\|Ga0136625_1096076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300012091\|Ga0136625_1163763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	762	Open in IMG/M
3300012091\|Ga0136625_1214609	Not Available	653	Open in IMG/M
3300012091\|Ga0136625_1216418	Not Available	650	Open in IMG/M
3300012091\|Ga0136625_1276831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	566	Open in IMG/M
3300012092\|Ga0136621_1074739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1385	Open in IMG/M
3300012092\|Ga0136621_1103173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1158	Open in IMG/M
3300012093\|Ga0136632_10001502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7965	Open in IMG/M
3300012093\|Ga0136632_10411373	Not Available	607	Open in IMG/M
3300012094\|Ga0136638_10109976	All Organisms → Viruses → Predicted Viral	1211	Open in IMG/M
3300012183\|Ga0136624_1009497	All Organisms → Viruses → Predicted Viral	4151	Open in IMG/M
3300012183\|Ga0136624_1067653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter aplysinae	1274	Open in IMG/M
3300012183\|Ga0136624_1123057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	866	Open in IMG/M
3300012184\|Ga0136610_1019068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2525	Open in IMG/M
3300012184\|Ga0136610_1028274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2056	Open in IMG/M
3300012184\|Ga0136610_1166419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter aplysinae	763	Open in IMG/M
3300012185\|Ga0136619_10014685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	3053	Open in IMG/M
3300012185\|Ga0136619_10123217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	993	Open in IMG/M
3300012185\|Ga0136619_10165598	Not Available	844	Open in IMG/M
3300012185\|Ga0136619_10190481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	781	Open in IMG/M
3300012186\|Ga0136620_10016954	Not Available	3459	Open in IMG/M
3300012186\|Ga0136620_10211285	Not Available	858	Open in IMG/M
3300012186\|Ga0136620_10437693	Not Available	557	Open in IMG/M
3300012187\|Ga0136622_10046960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1842	Open in IMG/M
3300012187\|Ga0136622_10166378	Not Available	931	Open in IMG/M
3300012187\|Ga0136622_10431971	Not Available	554	Open in IMG/M
3300012187\|Ga0136622_10458609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	536	Open in IMG/M
3300012187\|Ga0136622_10506875	Not Available	509	Open in IMG/M
3300012188\|Ga0136618_10049412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1863	Open in IMG/M
3300012188\|Ga0136618_10149702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1022	Open in IMG/M
3300012188\|Ga0136618_10209526	Not Available	846	Open in IMG/M
3300012526\|Ga0136637_1187954	Not Available	712	Open in IMG/M
3300012529\|Ga0136630_1101102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1060	Open in IMG/M
3300012529\|Ga0136630_1132361	Not Available	910	Open in IMG/M
3300012531\|Ga0136640_10014305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3440	Open in IMG/M
3300012531\|Ga0136640_10042070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2039	Open in IMG/M
3300012531\|Ga0136640_10045427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1962	Open in IMG/M
3300012531\|Ga0136640_10075876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1498	Open in IMG/M
3300012531\|Ga0136640_10202277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	860	Open in IMG/M
3300012531\|Ga0136640_10412676	Not Available	566	Open in IMG/M
3300012678\|Ga0136615_10077388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1639	Open in IMG/M
3300012678\|Ga0136615_10186511	Not Available	955	Open in IMG/M
3300012679\|Ga0136616_10337590	Not Available	686	Open in IMG/M
3300012680\|Ga0136612_10012252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4242	Open in IMG/M
3300012680\|Ga0136612_10630057	Not Available	544	Open in IMG/M
3300012680\|Ga0136612_10674666	Not Available	523	Open in IMG/M
3300012680\|Ga0136612_10678208	Not Available	522	Open in IMG/M
3300012684\|Ga0136614_10022675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	4618	Open in IMG/M
3300012684\|Ga0136614_10210234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1464	Open in IMG/M
3300012684\|Ga0136614_10266670	Not Available	1277	Open in IMG/M
3300013027\|Ga0170683_10019936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1943	Open in IMG/M
3300014488\|Ga0182001_10098553	Not Available	902	Open in IMG/M
3300017787\|Ga0183260_10024639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	4568	Open in IMG/M
3300017787\|Ga0183260_10247279	Not Available	1231	Open in IMG/M
3300017787\|Ga0183260_10299816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1094	Open in IMG/M
3300017787\|Ga0183260_10389530	Not Available	928	Open in IMG/M
3300017787\|Ga0183260_10394427	Not Available	921	Open in IMG/M
3300017787\|Ga0183260_10532542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300017787\|Ga0183260_10621486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter aplysinae	691	Open in IMG/M
3300017787\|Ga0183260_10667180	Not Available	661	Open in IMG/M
3300017787\|Ga0183260_10670408	Not Available	659	Open in IMG/M
3300017787\|Ga0183260_10675134	Not Available	656	Open in IMG/M
3300017787\|Ga0183260_10894146	Not Available	551	Open in IMG/M
3300017789\|Ga0136617_10074091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2976	Open in IMG/M
3300017789\|Ga0136617_10192072	Not Available	1725	Open in IMG/M
3300017789\|Ga0136617_10414730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1084	Open in IMG/M
3300017789\|Ga0136617_10635858	Not Available	834	Open in IMG/M
3300018432\|Ga0190275_10025597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	4655	Open in IMG/M
3300018719\|Ga0193596_1014588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1209	Open in IMG/M
3300018890\|Ga0193595_1015346	All Organisms → Viruses → Predicted Viral	2748	Open in IMG/M
3300018891\|Ga0193610_1054023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1091	Open in IMG/M
3300018891\|Ga0193610_1161115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	532	Open in IMG/M
3300018906\|Ga0193609_1009003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3422	Open in IMG/M
3300018906\|Ga0193609_1200881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	521	Open in IMG/M
3300018910\|Ga0193598_1003474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	6997	Open in IMG/M
3300018910\|Ga0193598_1118929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	604	Open in IMG/M
3300018917\|Ga0193611_1007201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4310	Open in IMG/M
3300018931\|Ga0193601_1043283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1400	Open in IMG/M
3300018933\|Ga0193614_1003740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	5973	Open in IMG/M
3300018933\|Ga0193614_1150574	Not Available	638	Open in IMG/M
3300018939\|Ga0193593_1064956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	923	Open in IMG/M
3300018962\|Ga0193589_1005884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3721	Open in IMG/M
3300019377\|Ga0190264_10419877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	877	Open in IMG/M
3300019767\|Ga0190267_11194191	Not Available	557	Open in IMG/M
3300027638\|Ga0208612_1002547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	7357	Open in IMG/M
3300031450\|Ga0272433_10004872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17445	Open in IMG/M
3300031450\|Ga0272433_10032508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter aplysinae	4329	Open in IMG/M
3300031450\|Ga0272433_10119520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1649	Open in IMG/M
3300031450\|Ga0272433_10160169	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300031473\|Ga0272434_1062673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2913	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	72.90%
Terrestrial	Environmental → Terrestrial	27.10%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	72.90%
Soil	Environmental → Terrestrial → Soil	21.50%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	4.67%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.93%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	72.90%
Sand	Environmental → Terrestrial → Soil → Sand	16.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	72.90%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	16.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	4.67%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	71.96%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	16.82%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805012	Soil microbial communities from sample at FACE Site NTS_067 Nevada Test Site	Environmental	Open in IMG/M
3300000750	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000827	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate B) 0B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005506	Soil microbial communities from Colorado Plateau, USA - Soil Crust after dry out 3A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300012042	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012094	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)	Environmental	Open in IMG/M
3300012183	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ469 (22.06)	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012526	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ857 (21.06)	Environmental	Open in IMG/M
3300012529	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)	Environmental	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013027	Gypsum rock hypoendolithic microbial communities from the Atacama Desert, Chile - Monturaqui	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018719	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018890	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, bundles v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018906	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018917	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018931	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018962	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300031450	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley sud	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS067_05474070	2119805012	Soil	VSACLLPAVRQLLSEHPRAARLSPEQVAGLLWILRHVPDEEDAPPDPYEVAGALEVLDVERGMA
JGI12272J11983_11562682	3300000750	Soil	VSARLLPVVRDLFGQHPPVARLSAEQRAGLLWKLRYVPDEEDSPPEPFEVADVLEVLDVERGLVA*
JGI12396J12026_10738352	3300000827	Soil	VSARLLPVVRDLFGQHPPVARLSAEQRAGLLWKLRYVPDEEDSPPEPFEVADALEVLDVERGLVA*
Ga0068912_110832301	3300005506	Soil	VSARLLPVVRDLFGQHPPVARLSAEQRAGLLWKLRYVPDEGDSPPEPFEVADALEVLDVERGTA
Ga0126307_107272572	3300009789	Serpentine Soil	VSARFVPPIRELLGQHPRAARLSPEQVAGLLWVLCYVPDEEDAPPDPYEVADALEVLDIEREAA*
Ga0136627_10110782	3300012042	Polar Desert Sand	VSAHLVPAVRELFGQHPRAARLSPEQVAGLLWILCYVSDEDGPPDPFEVEAALEPLDVERGAA*
Ga0136627_10361072	3300012042	Polar Desert Sand	MSARLLPSVRELFGQHPRAARLSPEQVAGLLWILCYAADDEGPPNPYEVADALEVLDVERGAAA*
Ga0136627_10366484	3300012042	Polar Desert Sand	MSLLPAVRELFGQHPRAARLSPEQVAGLLWILCYAADDEGPPNPYEVADALEVLDVERGVAA*
Ga0136627_10425832	3300012042	Polar Desert Sand	VSAHLVPAVRELFGQHPRAARLSPEQVAGLLWILCYVSDEDGPPDPFEVEAALEPLDVE
Ga0136627_10567682	3300012042	Polar Desert Sand	MSARLLPAVRELFGQHPRAARLSPEQVAGLLWILCYAADDEGPPNPYEVADALEALDVERGVAA*
Ga0136627_10702712	3300012042	Polar Desert Sand	MSLLPAVRELFGQHPQAARLSPEQVAGLLWILRFVPDDEGPPNPYEVADALEVLDVERGKAA*
Ga0136623_100105522	3300012045	Polar Desert Sand	VNAAELLPALRELYSQYPLAARLSPEQVAGLLWILCYVFDDEGPPEVYEVAAALEVLDIERGFAA*
Ga0136623_100186024	3300012045	Polar Desert Sand	MSAPLLPAVRELFGQHPRAARLSPEQVAGLLWILCYVPDSEAGGPPDPFEVEAALEPLDIEREAA*
Ga0136623_102673022	3300012045	Polar Desert Sand	VGPVSAHLLPAVRELFGQHPRATRLSPEQVAGLLWILCYAADDEGPPNPYEVADALEVLDVERGAAA*
Ga0136623_103440714	3300012045	Polar Desert Sand	AVRELFGQHPRAARLSPEQVAGLLWILCYAAADEGPPNPYEVADALEVLDVERGAAA*
Ga0136623_104448812	3300012045	Polar Desert Sand	MSARLLPAVRELFGQHPRAARLPPEQVAGLLWILCYAADEEGPPNPYEVADALEVLDVERGMAA*
Ga0136623_105150882	3300012045	Polar Desert Sand	MSARLLPAVRELFGQHPRAARLSPEQIAGLLWLLRYVPDDEGPPNPYEVADALEVLDVERGKAA*
Ga0136625_10960762	3300012091	Polar Desert Sand	LIAGLLPAVRELFGQHPRAAHLSPEQVAGLLWILRFVPDSDGPPDPFEVADALEVLDVERGAAA*
Ga0136625_11637632	3300012091	Polar Desert Sand	MSLLPAVRELFGQHPRAARLSPEQVAGLLWILCYAADDEGPPNPYEVADALEVLDVERGMAA*
Ga0136625_12146092	3300012091	Polar Desert Sand	VSVPASAWELLPAVRDLFEEHPRAARLSPEQVAGLLWILCYVTDKEGGPPDVCEVEAAMEPLDVERGAA*
Ga0136625_12164182	3300012091	Polar Desert Sand	MSAHLLPAVRDLFGQHPRAARLSPEQVAGLLWILCYVPDPVEAFEVAGVLEALDIERGAAA*
Ga0136625_12768313	3300012091	Polar Desert Sand	MSARLLPAVRELFGQHPRAVRLSPEQVAGLLWILCYVPDEDGPPDPYEAEAALEPLDIEREAA*
Ga0136621_10747393	3300012092	Polar Desert Sand	MSARLLPAVRGLFGQHPRAARLSPEQVAGLLWILCYVSDEDGPPDPYEVAAALEPLDVERGLA
Ga0136621_11031731	3300012092	Polar Desert Sand	MSAHLLPAVRDLFGQHPRAARLSPEQVAGLLWLLCYAADDEGPPNPYEVADALEVLDVER
Ga0136632_100015028	3300012093	Polar Desert Sand	VNVYLVAPIRDLLSEHPRAARLSPEQVAGLLWILCYVPDSEAGGPPDPFEVAAALEPLDIEREAA*
Ga0136632_104113731	3300012093	Polar Desert Sand	VVGGVEVNAAELLPAVRDLFGEHPRAACLSPEQVAGLLWILRFVADEAAPPEVHEVSSSLEVLDIER
Ga0136638_101099762	3300012094	Polar Desert Sand	MSAPASAWELLPAVRDLFEEHPRAARLSPEQVAGLLWILCYVPDGEADGPPDVCEVEAAMEPLDLERGAA*
Ga0136624_10094975	3300012183	Polar Desert Sand	VSGYLLPAVRELFGQHPRAARLSPEQIAGLLWILRYVPEPVEAFEVASVLEVLDIERGAA
Ga0136624_10676531	3300012183	Polar Desert Sand	VSAPVSAWELLPVVRALFEEHPRAARLSPEQVAGLLWILCYAADDEGPPNPYEVADALEVLDVERGAAA*
Ga0136624_11230572	3300012183	Polar Desert Sand	MSLLPAVRELFGQHPRAARLSPEQVAGLLWILCYAADDEGPPNPYEVADALEVLDVERGAAA*
Ga0136610_10190681	3300012184	Polar Desert Sand	VNAAELLPALRELYSQYPLAARLSPEQVAGLLWILCYVFDDEAPPEVYEVAAALEVLDIERGFAA*
Ga0136610_10282747	3300012184	Polar Desert Sand	AVRELFGQHPRAARLSPEQVAGLLWILCYVPDEDGPQDLFEVACALEVLDVERGKAA*
Ga0136610_11664191	3300012184	Polar Desert Sand	MSARLVPAVRELFGQHPRAARLSPEQVAALLWILCYAADDEGPPNPYEVADALEVLDVERGKAA*
Ga0136619_100146855	3300012185	Polar Desert Sand	VVGGVEVNAAELLPAVRDLFGEHPRAACLSPEQVAGLLWILRFVADEAAPPEVHEVSSALEVLDIERGEAA*
Ga0136619_101232172	3300012185	Polar Desert Sand	MSARLLPAVRELFGQHPRAARLSPEQVAGLLWILCYAADDEGPPNPYEVADALEVLDVERGAAA*
Ga0136619_101655981	3300012185	Polar Desert Sand	MSARLLPAVRELFGQHPRAVRLSPEQVAGLLWILCYVPDEEGPPNPYEVEAALEPLDIEREAA*
Ga0136619_101904812	3300012185	Polar Desert Sand	MSASLLPAIRQLLSEHPRAARLSPEQIAGLLWILRYVPDGEADGPPDPHEVADALEPLDLERGAA*
Ga0136620_100169542	3300012186	Polar Desert Sand	VNAALQLLPAIRELIGQHPRAARLSPEQVAGLLWILCYVPEHEPPEVFEVGAALEVLDIERGFAA*
Ga0136620_102112853	3300012186	Polar Desert Sand	MSLLPAGRELFGQHPRAARLSPEQVAGLLWILRFVPDSDGPPDPFEVADALEVLDVERGVAA*
Ga0136620_104376932	3300012186	Polar Desert Sand	MSASLLPTIRQLFSEHPRAARLSPEQVAGLLWILCYVPDSEGPPDVCEVEAAMEPLDIERGAA*
Ga0136622_100469603	3300012187	Polar Desert Sand	MSAYLVPAVRELFGQHPRAARPSPEQVAGLLWILRYVADEEDAPPDPHEVADALEVLDVERGVAA*
Ga0136622_101663781	3300012187	Polar Desert Sand	GAAVSAWELLPAVRALLEEHPRAARLSPEQIAGLLWILCYVPDSDADGPPDVCEVEAAMEPLDLERGAA*
Ga0136622_104319711	3300012187	Polar Desert Sand	VSAHLVPAVRDLFGQHPRAAHLSPEQVAGLLWILCFVADEDGPPDPFEVAGACEVLD
Ga0136622_104586092	3300012187	Polar Desert Sand	MSLLPAVRELFGQHPRAARLSPEQVAGLLWILCYVPDEDGPPDPYEVEAALEPLDLEREAA*
Ga0136622_105068752	3300012187	Polar Desert Sand	LERYRGGSAVSAWELLPAVRALLEEHPRAARLSPEQVAGLLWILCYVPDGEGPPDPYEVADAMEPLDLERGAA*
Ga0136618_100494122	3300012188	Polar Desert Sand	VSARLLPAVRQLLSEHPRAVRLSPKQVAGLLWIRCYVPDEDGPPEPYEVEAAREPLDAERRAAA*
Ga0136618_101497021	3300012188	Polar Desert Sand	RGERGMSSYLLPAVRELFGQHPRACRLSPEQVAGLLWILRYVADEEDTLPDPHEVADALEVLDVERGMAA*
Ga0136618_102095262	3300012188	Polar Desert Sand	MSAWELLPVVRALFEEHPRAARLSPEQIAGLLWILRYVPDSDADGPPDPHEVADALEPLDLARGAA*
Ga0136637_11879541	3300012526	Polar Desert Sand	VSARLLPAVRELFGQHPRAARLSPEQIAGLLWLLRYVPDSDADGPPAPHEVADALEPLDLERGAA*
Ga0136630_11011022	3300012529	Polar Desert Sand	VSAHLVPAVRELFGQHPRAARLSPEQVAGLLWILCYVSDEDGPPDPFEVAGACEVLDIERSAA*
Ga0136630_11323612	3300012529	Polar Desert Sand	VSAWELLPVVRALFEEHPRAARLSPEQVAGLLWILRFVPDDEGPPNPYEVADALEVLDVERGKAA*
Ga0136640_100143053	3300012531	Polar Desert Sand	MSAWELLPVVRALFEEHPRAARLSPEQIAGLLWILRYVPDSEGPPDPHEVADALEPLDLERGAA*
Ga0136640_100420703	3300012531	Polar Desert Sand	VSAHLVPAARDLFEKHPLAARLSPEQVAGLLWILRYVPDSESDGPPDPFEVAGACEVLDIERSAA*
Ga0136640_100454272	3300012531	Polar Desert Sand	MSARLLPAVRELFGQHPRAARLSPEQVAGLLWILRYVAEEEDDPPDPHEVADALEVLDVERGMAA*
Ga0136640_100758762	3300012531	Polar Desert Sand	MSLLPAVRELFGQHPRAARRSPEQVAGLLWILCYAADDEGPPNPYEVADALEALDVERGAAA*
Ga0136640_102022772	3300012531	Polar Desert Sand	VSARLVPAVRELFGQHPRAARLSPEQVAGLLWILCYVSDEDGPPDPYEVEAALEPLDLEREAA*
Ga0136640_104126761	3300012531	Polar Desert Sand	VSAPASAWELLPAVRDLFEEHPRAARLSPEQVAGLLWILRFVPEPVEAFEVAGVLEAFDIERGA
Ga0136615_100773882	3300012678	Polar Desert Sand	MSSHLLPAVRELFGQHPRAARLSPEQVAGLLWILRHVPDSEAGGPPEPFEVACALEVLDVERGLAA*
Ga0136615_101865111	3300012678	Polar Desert Sand	VNAAELLPALRELYSQYPLAARLSPEQVAGLLWILCYVFDDEAPPEVYEVAAALEVLDIERGFAV*
Ga0136616_103375902	3300012679	Polar Desert Sand	MSAWELLPAVRALLEEHPRAARLSPEQIAGLLWILRYVPDSDADGPPDPHEVADALEPLDLARGAA*
Ga0136612_100122522	3300012680	Polar Desert Sand	MSASLLPIIRQLFSEHPRAARLSPEQVAGLLWILCYVPDSEGPPDVCEVEAAMEPLDIERGAA*
Ga0136612_106300572	3300012680	Polar Desert Sand	VNAVELLPAIRELFGQHPRAACLSPEQITGLLWILCYVFENEPPEVYEVAAALEVLDIERGAA*
Ga0136612_106746662	3300012680	Polar Desert Sand	MSASLLPAVRELFGQHPRACRLSPEQVAGLLWILRYVADEEDTLPDPHEVADALEVLDVERGMAA*
Ga0136612_106782082	3300012680	Polar Desert Sand	MSAWELLPVVRALLEEHPRAARLSPEQIAGLLWILCYVPDDADGPPDPYEVADAMEPLDIERGAA*
Ga0136614_100226751	3300012684	Polar Desert Sand	VNAAELLPALRELYSQYPLAARLSPEQVARLLWILCYVFDDEGPPEVYEVAAALE
Ga0136614_102102342	3300012684	Polar Desert Sand	MNAAGLVPAIRELFGQHPRAAYLSPEQVAGLLWILCYVVEEGPPPEVHEVSAALEVLDIERGAAA*
Ga0136614_102666702	3300012684	Polar Desert Sand	MTSAWELLPAVRALFEEHPRAARLSPEQVAGLLWILCYVTDKEGGPPDVCEVEAAMEPLDLERGAA*
Ga0170683_100199362	3300013027	Rock	MIARLLPAVRNLCGQHPRTCRLSPEQVACLLWILRCVLDEGDAAPSPFEVADALEVLDVERGRAA*
Ga0182001_100985532	3300014488	Soil	MNAAELVPSIRELFSQYPRAVHLAPEQVAGLLFWILCYAADDEPPEVFEVAAALEVLDIETGREAA*
Ga0183260_100246394	3300017787	Polar Desert Sand	MSASLLPTIRQLFSEHPRAARLSPEQVAGLLWILCYVPDSEGPPDVCEVEAAMEPLDIERGAA
Ga0183260_102472791	3300017787	Polar Desert Sand	MSAWELLPVVRALFEEHPRAARLSPEQIAGLLWILRYVPDSDADGPPDPHEVADALEPLDLERGAA
Ga0183260_102998162	3300017787	Polar Desert Sand	MSARLLPAVRELFGQHPRAARLSPEQVAGLLWFLCYAADDEGPPNPYEVADALEVLDVERGAAA
Ga0183260_103895301	3300017787	Polar Desert Sand	VNVYLVAPIRDLFGQHPRAARLSPEQVAGLLWILCYVPDSEAGGPPEPFEVAAALEPLDIEREAA
Ga0183260_103944273	3300017787	Polar Desert Sand	VSAWDLLPAVRALFEEHPRAARLSPEQIAGLLWILCYVPDSEADGPPDVCEVEAAMEPLDLERGAA
Ga0183260_105325422	3300017787	Polar Desert Sand	MSSYLLPAVRELFGQHPRACRLAPEQVAGLLWILRYVADEEGAPPDPHEVADALEVLDVERGMAA
Ga0183260_106214861	3300017787	Polar Desert Sand	MSASLLPAIRQLLSEHPRAARLSPEQIAGLLWILCFVPDSEGPPDPFEVEAALEPLDLERGAA
Ga0183260_106671801	3300017787	Polar Desert Sand	VRELFGQHPRAARLSPEQIAGLLWILRFVPDEDGPPDPFEVEAALEPLDLERGAA
Ga0183260_106704083	3300017787	Polar Desert Sand	VSAHLVPAVRDLFGQHPRAAHLSPEQVAGLLWILCFVADEDGPPDPFEVAGACEVLDIERSAA
Ga0183260_106751342	3300017787	Polar Desert Sand	VNAVELLPAVRDLFGTHPRAARLSPEQVAGLLWILRYVFENEPPEVYEVAAALEVLDIERGAA
Ga0183260_108941462	3300017787	Polar Desert Sand	VSARGSAWELLPAVRDLFEAHPRAARLSPEQVAGLLWILRYVPDSEADGPPDVCEVEAAMEVLDIETGKAA
Ga0136617_100740912	3300017789	Polar Desert Sand	MSARLLPAVRELFGQHPRAARLSPEQVAGLLWILCYVPDSEAGGPPDPYEVEAALEPLDVERGLAA
Ga0136617_101920724	3300017789	Polar Desert Sand	MSAWELLPVVRALLEEHPRAARLSPEQIAGLLWILCYVPDSEGPPDPHEVADALEPLDIERGAA
Ga0136617_104147302	3300017789	Polar Desert Sand	MSSYLLPAVRELFGQHPRAARLSPEQVAGLLWILCYAADDEGPPNPYEVADALEVLDVERGVAA
Ga0136617_106358582	3300017789	Polar Desert Sand	MSAYLLPAVRELFGQHPRAACLSPEQIAGLLWILCYAADDEGPPEPYEVADALEVLDVERGLAA
Ga0190275_1002559710	3300018432	Soil	VNAADLVPAVRELISQYPLAAGLSPEQVAGLLWILCYVFDDEGPPEVYEVAAALEVLDIERGVAA
Ga0193596_10145882	3300018719	Soil	VSARLLPVVRDLFGQHPPVARLSAEQRAGLLWKLRYVPDEEDSPPEPFEVADALEVLDVERGLVA
Ga0193595_10153461	3300018890	Soil	VSARLLPVVRDLFGQHPPVARLSAEQRAGLLWKLRYVPDEEDSPPEPFEVADVLEVLEVLDVERGLAA
Ga0193610_10540233	3300018891	Soil	VSARLLPAVRDLLGQHPRAARLSSEQVAGLLWVLAYVPYEEDVPPNPYEVADALEVLDVERGMAA
Ga0193610_11611152	3300018891	Soil	VSAPLLPAVRDLMGQHPRTCSGESRAGAGLLWILRYVPDEEDAPPEPFEVADALEGL
Ga0193609_10090034	3300018906	Soil	VSARLLPVVRDLFGQHPPVARLSAEQRAGLLWKLRYVPDEEDSPPEPFEVAD
Ga0193609_12008812	3300018906	Soil	VSAPLLPAVRDLMGQHPRTCSGESRAGAGLLWILRYVPDEEDAPPEPFEVADALEGLDVERGLAA
Ga0193598_10034744	3300018910	Soil	VSARLLPAVRDLLGQHPRAARLSSEQVAGLLWVLAYVSDEEDGPPDPYEVADALEVLDVERGMAA
Ga0193598_11189292	3300018910	Soil	MSARLLPTVRQLLSEHPRAARLSPKQVAGVLWILRHVADEEDAPPDPYEVADALVEVLDVERGLAA
Ga0193611_10072012	3300018917	Soil	VSARLLPVVRDLFGQHPPVARLSAEQRAGLLWKLRYVPDEEDSPPEPFEVADVLEVLDVERGLVA
Ga0193601_10432831	3300018931	Soil	VSARLLPAVRDLIGQHPCAARLSAEQGADLLWILRYIPDEEDAPLEPFEVAEILEVLDVERGWQHDGRSYAPLRVLW
Ga0193614_10037407	3300018933	Soil	VSARLLPAVRDLLGQHPRAARLSSEQVAGLLWVLAYVSDEEDVPPDPYEVADALEVLDVERGMAA
Ga0193614_11505742	3300018933	Soil	MSARLLPTVRQLLSEHPRAARLSPKQVAGLLWILRHVADEEDAPPDPYEVADALEVLDVERGLAA
Ga0193593_10649562	3300018939	Soil	VSARLLPVVRDLFGQHPPVARLSAEQRAGLLWKLRYVPDEEDSPPEPF
Ga0193589_10058841	3300018962	Soil	VSARLLPVVRDLFGQHPPVARLSAEQRAGLLWKLRYVPDEEDSPPEPFEVADVLEV
Ga0190264_104198772	3300019377	Soil	VSARLLPVVRDLFGQHPPVARLSAEQRAGLLWKLRYVPDEEDSPPEPFEVADALEVLEVERGLVA
Ga0190267_111941912	3300019767	Soil	MKAAELVPAVRELFSQYPRAVRLLPEQVAGLLWILCYVAGDEPPEVFVVAAALEVLDIETGREAA
Ga0208612_10025475	3300027638	Polar Desert	MSAPLLPAVRELFGQHPRAARLSPEQVAGLLWILCYVPDSEAGGPPDPFEVEAALEPLDIEREAA
Ga0272433_100048726	3300031450	Rock	MNVLPAIRELFSQYQRAARCTPEVIAGLLWILCYIPEPVEAFGVEAALEPLAIERGEAA
Ga0272433_100325085	3300031450	Rock	VSAWDLLPAVRALLEEHPRAARLSPEQIAALLWILRFVPDSEADGPPDVCEVEAAMEPLDLERGAA
Ga0272433_101195202	3300031450	Rock	MSGADLLASIRGLFGQHPRAAGCTPEVIAGLLWILCFVPEPVEPFEVATCLEALDIERGEAA
Ga0272433_101601693	3300031450	Rock	MSYVLPAVRELFGQHPRAEGCSPEQIATLLWALRYTRAPVTCFEVEACLEALDIERGEAA
Ga0272434_10626731	3300031473	Rock	RALLEEHPRAARLSPEQIAALLWILRFVPDSEADGPPDVCEVEAAMEPLDLERGAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091161

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences