Metagenome / Metatranscriptome Family F091159

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091159
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	62 residues
Representative Sequence	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTARE
Number of Associated Samples	74
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	27.88 %
% of genes near scaffold ends (potentially truncated)	71.96 %
% of genes from short scaffolds (< 2000 bps)	95.33 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (73.832 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.056 % of family members)
Environment Ontology (ENVO)	Unclassified (68.224 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.944 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 87.72% β-sheet: 0.00% Coil/Unstructured: 12.28%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF04392	ABC_sub_bind	5.61
PF05876	GpA_ATPase	0.93
PF01609	DDE_Tnp_1	0.93
PF14235	DUF4337	0.93
PF14044	NETI	0.93
PF05598	DUF772	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.61
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.93
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.93
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.93
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.93
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.93
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	0.93
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
All Organisms	root	All Organisms	26.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
cellular organisms	root	All Organisms → cellular organisms	26.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.87 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.80 %
Methylosinus sporium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus sporium	0.93 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.80 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	0.93 %
Methylosinus sporium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus sporium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10180301	Not Available	500	Open in IMG/M
3300000956\|JGI10216J12902_124514053	Not Available	566	Open in IMG/M
3300005332\|Ga0066388_101348432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1234	Open in IMG/M
3300005332\|Ga0066388_103740456	Not Available	776	Open in IMG/M
3300005332\|Ga0066388_104506041	Not Available	709	Open in IMG/M
3300005332\|Ga0066388_105930545	Not Available	617	Open in IMG/M
3300005363\|Ga0008090_10076750	Not Available	732	Open in IMG/M
3300005713\|Ga0066905_100767249	Not Available	833	Open in IMG/M
3300005713\|Ga0066905_100936120	Not Available	760	Open in IMG/M
3300005764\|Ga0066903_101455421	Not Available	1290	Open in IMG/M
3300005764\|Ga0066903_103608403	Not Available	833	Open in IMG/M
3300005764\|Ga0066903_104680253	Not Available	728	Open in IMG/M
3300005764\|Ga0066903_106283118	Not Available	620	Open in IMG/M
3300005764\|Ga0066903_106691674	Not Available	599	Open in IMG/M
3300009792\|Ga0126374_10167044	Not Available	1355	Open in IMG/M
3300010043\|Ga0126380_10466158	Not Available	959	Open in IMG/M
3300010043\|Ga0126380_11969260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300010046\|Ga0126384_12514820	Not Available	500	Open in IMG/M
3300010047\|Ga0126382_10889732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300010359\|Ga0126376_10876003	Not Available	885	Open in IMG/M
3300010360\|Ga0126372_13293057	Not Available	502	Open in IMG/M
3300010361\|Ga0126378_10266648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1810	Open in IMG/M
3300010361\|Ga0126378_10623662	Not Available	1192	Open in IMG/M
3300010366\|Ga0126379_12034375	Not Available	677	Open in IMG/M
3300010366\|Ga0126379_12779216	Not Available	585	Open in IMG/M
3300010366\|Ga0126379_13665257	Not Available	515	Open in IMG/M
3300010376\|Ga0126381_100654797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → Methylosinus sporium	1499	Open in IMG/M
3300010376\|Ga0126381_100983758	All Organisms → cellular organisms → Bacteria → Proteobacteria	1217	Open in IMG/M
3300010376\|Ga0126381_102392879	Not Available	758	Open in IMG/M
3300010376\|Ga0126381_103601120	Not Available	607	Open in IMG/M
3300010376\|Ga0126381_105038854	Not Available	506	Open in IMG/M
3300016270\|Ga0182036_10824791	Not Available	757	Open in IMG/M
3300016294\|Ga0182041_12189892	Not Available	516	Open in IMG/M
3300016319\|Ga0182033_11665174	Not Available	578	Open in IMG/M
3300016341\|Ga0182035_10492136	Not Available	1046	Open in IMG/M
3300016357\|Ga0182032_10747845	Not Available	823	Open in IMG/M
3300016357\|Ga0182032_11586072	Not Available	569	Open in IMG/M
3300016371\|Ga0182034_10708433	Not Available	856	Open in IMG/M
3300016371\|Ga0182034_10994052	Not Available	724	Open in IMG/M
3300016387\|Ga0182040_10812448	Not Available	771	Open in IMG/M
3300016404\|Ga0182037_10744592	Not Available	842	Open in IMG/M
3300016404\|Ga0182037_10904700	Not Available	765	Open in IMG/M
3300016404\|Ga0182037_11989741	Not Available	521	Open in IMG/M
3300016445\|Ga0182038_10500894	Not Available	1036	Open in IMG/M
3300021560\|Ga0126371_12747359	Not Available	597	Open in IMG/M
3300021560\|Ga0126371_13637020	Not Available	520	Open in IMG/M
3300027874\|Ga0209465_10416309	Not Available	673	Open in IMG/M
3300031545\|Ga0318541_10122746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1411	Open in IMG/M
3300031545\|Ga0318541_10313147	Not Available	875	Open in IMG/M
3300031549\|Ga0318571_10170763	Not Available	762	Open in IMG/M
3300031561\|Ga0318528_10351673	Not Available	791	Open in IMG/M
3300031564\|Ga0318573_10289317	Not Available	876	Open in IMG/M
3300031572\|Ga0318515_10518271	Not Available	636	Open in IMG/M
3300031573\|Ga0310915_10151306	Not Available	1604	Open in IMG/M
3300031573\|Ga0310915_10219691	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300031573\|Ga0310915_10286560	Not Available	1162	Open in IMG/M
3300031668\|Ga0318542_10499844	Not Available	632	Open in IMG/M
3300031680\|Ga0318574_10200276	Not Available	1147	Open in IMG/M
3300031681\|Ga0318572_10423847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300031682\|Ga0318560_10526982	Not Available	640	Open in IMG/M
3300031719\|Ga0306917_10438549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1022	Open in IMG/M
3300031719\|Ga0306917_10714016	Not Available	787	Open in IMG/M
3300031736\|Ga0318501_10164351	Not Available	1148	Open in IMG/M
3300031744\|Ga0306918_10190553	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300031747\|Ga0318502_10099663	Not Available	1609	Open in IMG/M
3300031747\|Ga0318502_10328541	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300031768\|Ga0318509_10239017	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300031777\|Ga0318543_10158248	Not Available	997	Open in IMG/M
3300031781\|Ga0318547_10694817	Not Available	632	Open in IMG/M
3300031782\|Ga0318552_10252515	Not Available	895	Open in IMG/M
3300031792\|Ga0318529_10047850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1833	Open in IMG/M
3300031795\|Ga0318557_10298180	Not Available	740	Open in IMG/M
3300031798\|Ga0318523_10413758	Not Available	670	Open in IMG/M
3300031819\|Ga0318568_10840547	Not Available	569	Open in IMG/M
3300031859\|Ga0318527_10462310	Not Available	541	Open in IMG/M
3300031879\|Ga0306919_10197255	Not Available	1494	Open in IMG/M
3300031879\|Ga0306919_10435093	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300031890\|Ga0306925_10760849	Not Available	1008	Open in IMG/M
3300031896\|Ga0318551_10100754	Not Available	1536	Open in IMG/M
3300031896\|Ga0318551_10331515	Not Available	859	Open in IMG/M
3300031910\|Ga0306923_10819099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1026	Open in IMG/M
3300031941\|Ga0310912_10532527	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300031942\|Ga0310916_10504399	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300031954\|Ga0306926_10970120	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300031954\|Ga0306926_11227094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	879	Open in IMG/M
3300031959\|Ga0318530_10030330	Not Available	1933	Open in IMG/M
3300031959\|Ga0318530_10218053	Not Available	784	Open in IMG/M
3300032001\|Ga0306922_10400798	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300032001\|Ga0306922_10670694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1093	Open in IMG/M
3300032041\|Ga0318549_10148975	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300032044\|Ga0318558_10272044	Not Available	835	Open in IMG/M
3300032051\|Ga0318532_10120797	Not Available	927	Open in IMG/M
3300032059\|Ga0318533_10341086	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300032060\|Ga0318505_10099119	Not Available	1317	Open in IMG/M
3300032063\|Ga0318504_10035590	Not Available	2011	Open in IMG/M
3300032064\|Ga0318510_10480030	Not Available	536	Open in IMG/M
3300032065\|Ga0318513_10073439	Not Available	1569	Open in IMG/M
3300032066\|Ga0318514_10383847	Not Available	745	Open in IMG/M
3300032076\|Ga0306924_10825363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300032094\|Ga0318540_10635080	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300032261\|Ga0306920_100335257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2251	Open in IMG/M
3300032261\|Ga0306920_101636580	Not Available	914	Open in IMG/M
3300032261\|Ga0306920_102760889	Not Available	669	Open in IMG/M
3300033290\|Ga0318519_10121986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1428	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.78%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	69.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101803012	3300000597	Forest Soil	VRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE*
JGI10216J12902_1245140531	3300000956	Soil	HRRKLRGEAMIDNRTQEFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTARE*
Ga0066388_1013484321	3300005332	Tropical Forest Soil	AMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAAPFSREGDECTARE*
Ga0066388_1037404561	3300005332	Tropical Forest Soil	NLPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADDCTARE*
Ga0066388_1045060412	3300005332	Tropical Forest Soil	NVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPPGDECTTRE*
Ga0066388_1059305452	3300005332	Tropical Forest Soil	QVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTAPFFKGGDECTARE*
Ga0008090_100767501	3300005363	Tropical Rainforest Soil	HGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE*
Ga0066905_1007672492	3300005713	Tropical Forest Soil	FLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTVRAAPFFKGGDECTVRE*
Ga0066905_1009361202	3300005713	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTARE*
Ga0066903_1014554211	3300005764	Tropical Forest Soil	AMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAAPPGDECTTRE*
Ga0066903_1036084031	3300005764	Tropical Forest Soil	AMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAAPSFRGGDECTARE*
Ga0066903_1046802531	3300005764	Tropical Forest Soil	RSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLSFRAAPFFREGDECTARE*
Ga0066903_1062831181	3300005764	Tropical Forest Soil	QVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTAPFFKGGDECTARE*
Ga0066903_1066916742	3300005764	Tropical Forest Soil	AMKNARTIEACLDRLAMMGADRELKMIAGRLSRLSFRAAPFFRGGDE*
Ga0126374_101670443	3300009792	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAIMGAHRELKMIAGRLSRLTFRAADECTARE*
Ga0126380_104661581	3300010043	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGQLSRLTFRATPFFREGDECTARE*
Ga0126380_119692602	3300010043	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHREMKMIAGRLSRLTSRAAPFFRGTDSPVVSSEP*
Ga0126384_125148201	3300010046	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTA
Ga0126382_108897322	3300010047	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTVRAAPFFKGGDECTVRE*
Ga0126376_108760031	3300010359	Tropical Forest Soil	QVFDVAMKNARTIEACLDRLAMMGAQREMKMIAGRLSRLTFRAAPPGDECTTRE*
Ga0126372_132930571	3300010360	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAEPFFKGGDECTARE*
Ga0126378_102666483	3300010361	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE*
Ga0126378_106236621	3300010361	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLSFRAAPFFREGDECTARE*
Ga0126379_120343752	3300010366	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAIMGAHRELKMIAGRLSRLTFRAADECTTRE*
Ga0126379_127792161	3300010366	Tropical Forest Soil	DNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE*
Ga0126379_136652571	3300010366	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAAPGGDECTARE
Ga0126381_1006547974	3300010376	Tropical Forest Soil	TQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAAPSFRGGDECTARE*
Ga0126381_1009837582	3300010376	Tropical Forest Soil	MKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFEGDDECTARE*
Ga0126381_1023928791	3300010376	Tropical Forest Soil	MIDNRTQVFEVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE*
Ga0126381_1036011201	3300010376	Tropical Forest Soil	TQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTAPFFKGGDECTARE*
Ga0126381_1050388541	3300010376	Tropical Forest Soil	TQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAAPPGDECTTRE*
Ga0182036_108247911	3300016270	Soil	MIDNRTQVFDVAMKNARTIEACVERLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0182041_121898921	3300016294	Soil	GEAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDECTAARE
Ga0182033_116651741	3300016319	Soil	VHRGKLRGEAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDECTAARE
Ga0182035_104921361	3300016341	Soil	MIDNRTQVFDAAMKNARTIEACLDRLAMMGARRELKMMAGRLSRLTFRAAPFFREGDECTAARE
Ga0182032_107478451	3300016357	Soil	QKLILTMGENLALLTYKAHGGGAMIDNRTQVFDVVMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFREGDECTAARE
Ga0182032_115860721	3300016357	Soil	MIDNRTQVFDAAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDECTAAR
Ga0182034_107084331	3300016371	Soil	VFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0182034_109940521	3300016371	Soil	RGKLRGEAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDECTAARE
Ga0182040_108124481	3300016387	Soil	MIDNRTQVFDAAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFF
Ga0182037_107445921	3300016404	Soil	MKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0182037_109047001	3300016404	Soil	NRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADEYTARK
Ga0182037_119897411	3300016404	Soil	HGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0182038_105008942	3300016445	Soil	KLRGEAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDECTAARE
Ga0126371_127473591	3300021560	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0126371_136370201	3300021560	Tropical Forest Soil	TRGWAMIDNRTQVFDVAMKNARTIEACLDRLAIMGAHRELKMIAGRLSRLTFRAADECTARE
Ga0209465_104163092	3300027874	Tropical Forest Soil	MIDNRTQVFDVAMKNARTIEACLDRLAIMGAHRELKMIAGRLSRLTFRAADECTARE
Ga0318541_101227462	3300031545	Soil	MRTNLPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0318541_103131471	3300031545	Soil	QVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADEYTARK
Ga0318571_101707632	3300031549	Soil	AHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318528_103516732	3300031561	Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADEYTARK
Ga0318573_102893173	3300031564	Soil	AMIDNRTQVFYVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318515_105182712	3300031572	Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFR
Ga0310915_101513062	3300031573	Soil	MIDNRTQVFDAAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDECTAARE
Ga0310915_102196911	3300031573	Soil	IDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0310915_102865603	3300031573	Soil	DVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318542_104998441	3300031668	Soil	LAERSRGLARCPPSSKLRGEAMIDNRTQVFDAAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDECTAARE
Ga0318574_102002762	3300031680	Soil	MGENLALLTYKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADEYTARK
Ga0318572_104238471	3300031681	Soil	QVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318560_105269821	3300031682	Soil	VAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADEYTARK
Ga0306917_104385491	3300031719	Soil	MIDNRTQVFDAAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDEC
Ga0306917_107140161	3300031719	Soil	NVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0318501_101643513	3300031736	Soil	FDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0306918_101905532	3300031744	Soil	RSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0318502_100996634	3300031747	Soil	LRHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318502_103285411	3300031747	Soil	ALMRTNLPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0318509_102390172	3300031768	Soil	LRALMRTNLPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0318543_101582483	3300031777	Soil	GGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318547_106948171	3300031781	Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDECTAARE
Ga0318552_102525151	3300031782	Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0318529_100478504	3300031792	Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFREGDECTAARE
Ga0318557_102981801	3300031795	Soil	LLTYKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADEYTARK
Ga0318523_104137582	3300031798	Soil	SCGKVKPKLVLTMGENLALLTYKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADEYTARK
Ga0318568_108405471	3300031819	Soil	LPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0318511_101886651	3300031845	Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPGAVGAS
Ga0318512_102748612	3300031846	Soil	LPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTSRAAPFSEEAMGARRE
Ga0318527_104623101	3300031859	Soil	NRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0306919_101972551	3300031879	Soil	NARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0306919_104350931	3300031879	Soil	FLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0306925_107608492	3300031890	Soil	MGENLALLTYKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318551_101007544	3300031896	Soil	RYLRALRRTNLPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTSRAAPFSEEAMGARRE
Ga0318551_103315151	3300031896	Soil	GAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318520_100367886	3300031897	Soil	LPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTSRAAPFSEEAMGARRG
Ga0306923_108190992	3300031910	Soil	MIDNRTQVFDAAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAP
Ga0310912_105325272	3300031941	Soil	NARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0310916_105043992	3300031942	Soil	GAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0306926_109701202	3300031954	Soil	AMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0306926_112270941	3300031954	Soil	DVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADEYTARK
Ga0318530_100303301	3300031959	Soil	RTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318530_102180531	3300031959	Soil	VFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADEYTARK
Ga0306922_104007981	3300032001	Soil	RALRRTNLPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0306922_106706941	3300032001	Soil	MIDNRTQVFDAAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFRE
Ga0318549_101489751	3300032041	Soil	SGGEAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0318558_102720442	3300032044	Soil	YKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318532_101207973	3300032051	Soil	IDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318533_103410862	3300032059	Soil	GGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTFRAAPFFKGGDECTARE
Ga0318505_100991192	3300032060	Soil	MGENLALLTYKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTARE
Ga0318504_100355901	3300032063	Soil	MRTNLPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTSRAAPFSEEAMGARRE
Ga0318510_104800301	3300032064	Soil	LNVRSNAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0318513_100734391	3300032065	Soil	RALRRTNLPFLPLNVRSKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGADRELKMIAGRLSRLTSRAAPFSEEAMGARRE
Ga0318514_103838471	3300032066	Soil	AMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0306924_108253631	3300032076	Soil	MIDNRTQVFDAAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDECTAA
Ga0318540_106350801	3300032094	Soil	MIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFR
Ga0306920_1003352578	3300032261	Soil	KNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0306920_1016365803	3300032261	Soil	LLTYKAHGGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADECTAPE
Ga0306920_1027608891	3300032261	Soil	MIDNRTQVFDAAMKNARTIEACLDRLAMMGAHRELKMMAGRLSRLTFRAAPFFREGDE
Ga0318519_101219861	3300033290	Soil	GGGAMIDNRTQVFDVAMKNARTIEACLDRLAMMGAHRELKMIAGRLSRLTFRAADEYTAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091159

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences