Metagenome Family F091064

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091064
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	48 residues
Representative Sequence	MNLLAHGGTPGLIAEISIGLLVGGLLAVVWFRERRRRARGERPAQAPMRD
Number of Associated Samples	69
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.44 %
% of genes near scaffold ends (potentially truncated)	41.67 %
% of genes from short scaffolds (< 2000 bps)	95.37 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.148 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (35.185 % of family members)
Environment Ontology (ENVO)	Unclassified (38.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.74% β-sheet: 0.00% Coil/Unstructured: 60.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00266	Aminotran_5	5.56
PF01804	Penicil_amidase	2.78
PF00723	Glyco_hydro_15	0.93
PF02882	THF_DHG_CYH_C	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.78
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	0.93
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.93
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.15 %
Unclassified	root	N/A	1.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.15 %
Unclassified	root	N/A	1.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.15 %
Unclassified	root	N/A	1.85 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	71.30 %
Unclassified	root	N/A	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	71.30 %
Unclassified	root	N/A	1.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.41 %
Unclassified	root	N/A	1.85 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.41 %
Unclassified	root	N/A	1.85 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.41 %
Unclassified	root	N/A	1.85 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.41 %
Unclassified	root	N/A	1.85 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.41 %
Unclassified	root	N/A	1.85 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090009\|LWAnN_GIDYKCY01E5CFH	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
2170459014\|G1P06HT01EVU2F	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300002568\|C688J35102_119833139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300004156\|Ga0062589_101337138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300004643\|Ga0062591_102988654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300004779\|Ga0062380_10340523	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300004782\|Ga0062382_10228643	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005093\|Ga0062594_101911346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300005093\|Ga0062594_103043961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300005338\|Ga0068868_102368226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300005354\|Ga0070675_100335542	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300005548\|Ga0070665_102026070	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005564\|Ga0070664_101711281	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005564\|Ga0070664_101978757	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005614\|Ga0068856_102382353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300005833\|Ga0074472_10962774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1050	Open in IMG/M
3300005840\|Ga0068870_11220255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300009091\|Ga0102851_13246971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300009167\|Ga0113563_13606954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300012212\|Ga0150985_113216196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300014317\|Ga0075343_1185006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300014969\|Ga0157376_10534814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1157	Open in IMG/M
3300014969\|Ga0157376_10930489	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300015372\|Ga0132256_101998958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300015373\|Ga0132257_104076179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300017792\|Ga0163161_11068251	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300017792\|Ga0163161_11268516	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300017792\|Ga0163161_11422125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300017965\|Ga0190266_10420285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300017965\|Ga0190266_10648107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300018081\|Ga0184625_10330919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300018083\|Ga0184628_10575434	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300018476\|Ga0190274_13039537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300018476\|Ga0190274_13334717	Not Available	541	Open in IMG/M
3300018481\|Ga0190271_10221263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1904	Open in IMG/M
3300018481\|Ga0190271_12557429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300020186\|Ga0163153_10010606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8979	Open in IMG/M
3300021445\|Ga0182009_10618598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300022756\|Ga0222622_10448157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300025925\|Ga0207650_11200107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300025931\|Ga0207644_11496122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300025931\|Ga0207644_11588570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300025937\|Ga0207669_10152279	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300025960\|Ga0207651_10764487	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300025961\|Ga0207712_10487207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052	Open in IMG/M
3300026041\|Ga0207639_11032142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300026121\|Ga0207683_11050393	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300027870\|Ga0209023_10110332	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300027870\|Ga0209023_10692730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300027900\|Ga0209253_10331758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172	Open in IMG/M
3300028379\|Ga0268266_12354778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300028721\|Ga0307315_10287906	Not Available	520	Open in IMG/M
3300028802\|Ga0307503_10337285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	768	Open in IMG/M
3300028803\|Ga0307281_10055994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1250	Open in IMG/M
3300029990\|Ga0311336_11379108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300030114\|Ga0311333_10949193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300030114\|Ga0311333_11277957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300030294\|Ga0311349_10155601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	2146	Open in IMG/M
3300030339\|Ga0311360_11412397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300030838\|Ga0311335_10281931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1125	Open in IMG/M
3300031232\|Ga0302323_100605239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1188	Open in IMG/M
3300031366\|Ga0307506_10032279	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300031366\|Ga0307506_10046215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1246	Open in IMG/M
3300031366\|Ga0307506_10065437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1105	Open in IMG/M
3300031726\|Ga0302321_102351520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300031726\|Ga0302321_103253815	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300031772\|Ga0315288_10883830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	812	Open in IMG/M
3300031834\|Ga0315290_10033622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4078	Open in IMG/M
3300031834\|Ga0315290_10074846	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300031834\|Ga0315290_10404683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1196	Open in IMG/M
3300031834\|Ga0315290_10633438	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300031834\|Ga0315290_11009120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300031834\|Ga0315290_11389771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300031834\|Ga0315290_11421718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300031862\|Ga0315280_10535705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300031873\|Ga0315297_10492317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1031	Open in IMG/M
3300031873\|Ga0315297_10769308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300031873\|Ga0315297_11056103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300031902\|Ga0302322_100476086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1449	Open in IMG/M
3300031902\|Ga0302322_100564853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1334	Open in IMG/M
3300031902\|Ga0302322_100912715	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300031997\|Ga0315278_10358964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1506	Open in IMG/M
3300031997\|Ga0315278_11106382	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300031997\|Ga0315278_11160064	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300031997\|Ga0315278_11298233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300031997\|Ga0315278_11793221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300032018\|Ga0315272_10339332	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300032118\|Ga0315277_11618903	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300032143\|Ga0315292_10124314	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300032143\|Ga0315292_10237236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1503	Open in IMG/M
3300032143\|Ga0315292_10279987	All Organisms → cellular organisms → Bacteria	1385	Open in IMG/M
3300032143\|Ga0315292_10332741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1269	Open in IMG/M
3300032143\|Ga0315292_10457175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1075	Open in IMG/M
3300032143\|Ga0315292_11375809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300032163\|Ga0315281_10948070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300032164\|Ga0315283_10447065	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300032164\|Ga0315283_11304555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300032164\|Ga0315283_11529429	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300032164\|Ga0315283_12379375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300032173\|Ga0315268_10492273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1209	Open in IMG/M
3300032173\|Ga0315268_12208939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300032173\|Ga0315268_12402594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300032256\|Ga0315271_10554867	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300032256\|Ga0315271_10688385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	878	Open in IMG/M
3300032342\|Ga0315286_11435278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300032397\|Ga0315287_10607010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1296	Open in IMG/M
3300032516\|Ga0315273_11168791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300033416\|Ga0316622_100636116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.85%
Host-Associated	Host-Associated	22.22%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	47.22%
Terrestrial	Environmental → Terrestrial	29.63%
Plants	Host-Associated → Plants	22.22%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	43.52%
Soil	Environmental → Terrestrial → Soil	18.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.96%
Peat	Environmental → Terrestrial → Peat	11.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.26%
Sediment	Environmental → Aquatic → Sediment	3.70%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	36.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.48%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Loam	Environmental → Terrestrial → Soil → Loam	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	35.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	35.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.11%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	10.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.78%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.85%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.85%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.93%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.93%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090009	Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - SIP 13C-methane anaerobic+nitrate	Environmental	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWAnN_03340970	2088090009	Freshwater Sediment	VNLLAHGGTPGLVAETLIALLVGGLLALVWFRERRRRARGE
2PV_00107250	2170459014	Switchgrass, Maize And Mischanthus Litter	VNVLAHGGTPGLLAEVSIGLLVGCVLAVVWLRERRRRSRGERPAQAPMNE
C688J35102_1198331392	3300002568	Soil	VSLLAHGGTPGLIAEISIGLLVGGLLAGIWLRERRRRTRGER
Ga0062589_1013371381	3300004156	Soil	VNLLAHGGTPGLIAEISIGLLVAGLLAGIWLRERRRRTRG
Ga0062591_1029886542	3300004643	Soil	VNLLAHGGTPGLIAEISIGLLVAGLLAGIWLRERRRRTRGERRSAASMRD*
Ga0062380_103405232	3300004779	Wetland Sediment	MLAHGGTPGLIAELSIGLLVGGLLAVVWFRERRRRARGERPAQAPMRD*
Ga0062382_102286432	3300004782	Wetland Sediment	MSPVAHGGTPGLIAEVSIGLLVGGALAVVWLRERRRRARGERPARAPMND*
Ga0062594_1019113461	3300005093	Soil	VNLLAHGGTPGLIAEISIGLLVGGLLVGIWLRERRRRTRGER
Ga0062594_1030439611	3300005093	Soil	VTVLAHGGTPGLIAELTIGLLVAGLLAGIWLRERRRRTRDGRPSEASMRD*
Ga0068868_1023682261	3300005338	Miscanthus Rhizosphere	VNLLAHGGTPGLIAEISIGLLVAALLAGIWLRERRRRTRGEHRSEASMRD*
Ga0070675_1003355421	3300005354	Miscanthus Rhizosphere	PGLIAELTIGLLVAGLLAGIWLRERRRRTRDGRPSEASMRD*
Ga0070665_1020260702	3300005548	Switchgrass Rhizosphere	LLQVVNLLAHGGTPGLIAELSIGFLVAGLLAGIWLRERRRRTRGERRSAASMRD*
Ga0070664_1017112812	3300005564	Corn Rhizosphere	VNLLAHGGTPGLIAEISIGLLVAALLAGIWLRERRRRTRGERRSEASMRD*
Ga0070664_1019787571	3300005564	Corn Rhizosphere	PLAQVTVLAHGGTPGLIAEITIGLLVAGLLAGIWLRERRRRTRGETRKPRSEASMRD*
Ga0068856_1023823532	3300005614	Corn Rhizosphere	MNLLAHGGTPGLIAEVAIGLVIVVLLGSVWLREKRRRARAGLGAAPMRDEE*
Ga0074472_109627742	3300005833	Sediment (Intertidal)	MSLLAHGGTPGLIAEVSIGLLVGGLLAVVWLRERRRRARGERPARAPMND*
Ga0068870_112202551	3300005840	Miscanthus Rhizosphere	VNLLAHGGTPGLIAEISIGLLVAALLAGIWLRERRRRTR
Ga0102851_132469711	3300009091	Freshwater Wetlands	MSPLAHGGTPGLIAEVSIGLLVGGLLAVVWLRERRR
Ga0113563_136069541	3300009167	Freshwater Wetlands	MSLLAHGGTPGLIAEISIGLLVGGLLGVVWFRERRRQARGERPAQ
Ga0150985_1132161962	3300012212	Avena Fatua Rhizosphere	VNVLAHGGTPGLIVEASIGILAACMLAAIWVRERRRRGRKEHEGDAPMRE*
Ga0075343_11850062	3300014317	Natural And Restored Wetlands	MIPLAHGGTPGLIAELLLGLLVAASLALSWVKERRRRTRDQRPPEAAMRE*
Ga0157376_105348141	3300014969	Miscanthus Rhizosphere	VTVLAHGGTPGLIAEITIGLLVAGLLAGIWLRERRRRTRGE
Ga0157376_109304892	3300014969	Miscanthus Rhizosphere	DPLAQVNLLAHGGTPGLIAEISIGLLVAALLAGIWLRERRRRTRGEHRSEASMRD*
Ga0132256_1019989582	3300015372	Arabidopsis Rhizosphere	VVNLLAHGGTPGLIAEISIGLLVAGLLAGIWLRERHRRTRGERRS
Ga0132257_1040761792	3300015373	Arabidopsis Rhizosphere	MNLLAHGGTPGLIAEVAIGLVVVVLLGSVWLREKRRRARAGLGAAPMRDEE*
Ga0163161_110682512	3300017792	Switchgrass Rhizosphere	VNLLAHGGTPGLIAEISIGLLVAGLLAGIWLRERRRRTRGERRSAASMRD
Ga0163161_112685162	3300017792	Switchgrass Rhizosphere	PLAPLAQVTVLAHGGTPGLIAELTIGLLVAGLLAGIWLRERRRRTRDGRPSEASMRD
Ga0163161_114221251	3300017792	Switchgrass Rhizosphere	MNLLAHGGTPGLIAEISIGLLVAALLAGIWLRERRRRTRGETRKPRSEASMRD
Ga0190266_104202852	3300017965	Soil	VTVLAHGGAPGLIAEITIGLLVAGLLAGIWLRERRRRTRGETREPRSEASMRD
Ga0190266_106481072	3300017965	Soil	VNLLAHGGTPGLIAEISIGLMVGALLAGIWLRERRRRTRGERPRGAQMRD
Ga0184625_103309192	3300018081	Groundwater Sediment	MTVLAHGGTPGLIAEIAIGLLLAGLLAGIWLRERRRRTRGETREPRSEASMRD
Ga0184628_105754341	3300018083	Groundwater Sediment	ADGAVHGRRPLDPLAQVSLLAHGGTPGLIAEISIGLLVAGLLAGIWLRERRRRTRGERPRGAQMRD
Ga0190274_130395372	3300018476	Soil	MSLLAHGGTPGLIAEVSIGLLLAGLLLGVWLRERRRRIRGERRSGASMRE
Ga0190274_133347171	3300018476	Soil	ADGAVHGRRPLAPLSQVTVLAHGGTPGLIAEITIGLLVAGLLAGIWLRERRRRTRAERPSEASMRD
Ga0190271_102212633	3300018481	Soil	MSLLAHGGVPGLIAEISLGLLLAGALAVVWFRERRRRARGERPPKAPMRG
Ga0190271_125574291	3300018481	Soil	MSLLAHGGTPGLIAEVSIGLLVAGLFLGIWLRERRRRTRGARRSGASMR
Ga0163153_100106069	3300020186	Freshwater Microbial Mat	MNVLAHGGTPGLIAEVSLGLLAAGALAFVWFRERRRRTRGERPPEAPMRE
Ga0182009_106185981	3300021445	Soil	VNLLAHGGTPGLIAEISIGLLIAGLLAGIWLRERRRRTRGERRSEASMRD
Ga0222622_104481572	3300022756	Groundwater Sediment	VTVLAHGGTPGLIAEITIGLLVAGLLAGIWLRERRRRTRGETREPRSEASMRD
Ga0207650_112001071	3300025925	Switchgrass Rhizosphere	VTVLAHGGTPGLIAELTIGLLVAGLLAGIWLRERRRRTRDGRPSEASMRD
Ga0207644_114961222	3300025931	Switchgrass Rhizosphere	VNLLAHGGTPGLIAEISIGLLIAGLLAGIWLRERRRRTRGERRSEA
Ga0207644_115885701	3300025931	Switchgrass Rhizosphere	VTVLAHGGTPGLIAEITIGLLVAGLLAGIWLRERRRRTRG
Ga0207669_101522792	3300025937	Miscanthus Rhizosphere	VSLLAHGGTPGLIAEISIGLLVAGLLAGIWLRERRRRTRGEHRSEASMRD
Ga0207651_107644872	3300025960	Switchgrass Rhizosphere	LAQVTVLAHGGTPGLIAEITIGLLFAGLLAGIWLRERRRRTRGETRKPRSEASMRD
Ga0207712_104872071	3300025961	Switchgrass Rhizosphere	VTVLAHGGTPGLIAEITIGLLVAGLLAGIWLRERRRRTRGETRKPRSEASMRD
Ga0207639_110321422	3300026041	Corn Rhizosphere	VTLLAHGGTPGLIAELTIGLLVAGLLAGIWLRERRRRTRDGRPSEASMRD
Ga0207683_110503932	3300026121	Miscanthus Rhizosphere	PGLIAEISIGLLVAALLAGIWLRERRRRTRGEHRSEASMRD
Ga0209023_101103323	3300027870	Freshwater And Sediment	MSLLAHGGTPGLVAETLIVLFVGGVLALVWFRERRRPVRGERKPDAPMRE
Ga0209023_106927302	3300027870	Freshwater And Sediment	MSVLAHGGTPGLIAEVSIGLLVAGLLAVVWLRERRRRIRGEHPAEAPMRD
Ga0209253_103317583	3300027900	Freshwater Lake Sediment	MSLLAHGGTPGLIAEVSIGLLVGGLLAVVWLRERRRRARGERPARAPMND
Ga0268266_123547782	3300028379	Switchgrass Rhizosphere	VNLLAHGGTPGLIAEISIGLLVAALLAGIWLRERRRRTRGERRSEASMRD
Ga0307315_102879061	3300028721	Soil	PVHGRWPLDPLAQVSLLAHGGTPGLIAELSIGLLVGGLLVGIWLRERRRRTRCERQSEASMRDEGQ
Ga0307503_103372852	3300028802	Soil	VSLLAHGGTPGLIAEISIGLLVAGLLAGIWLRERR
Ga0307281_100559942	3300028803	Soil	VNLLAHGGTPGLIAEISIGLLVAGLLAGIWLRERHRRTRGERARGAQMRD
Ga0311336_113791082	3300029990	Fen	LNVLAHGGTPGLIGEISTGFLVAVVLAVVWIRERRRRAAQGERPEKAPMNE
Ga0311333_109491932	3300030114	Fen	MSVLAHGGTPGLIAEVSIGLMVAALVAYVWVRERRRRARGDRPAQAAMRDEE
Ga0311333_112779572	3300030114	Fen	VNVLAHGGTPGLIGEISTGLLVAVVLAVVWIRERRRRAVQGERPEKAPMNE
Ga0311349_101556012	3300030294	Fen	MSVLAHGGTPGLIAELSIGLMVVALVVYVWVRERRRRVRGERPAQAEMRDEE
Ga0311360_114123972	3300030339	Bog	MSVLAHGGTPGLIAEVSIGLMVAALVAYVWVRERRRRARGDR
Ga0311335_102819312	3300030838	Fen	MSVLAHGGTPGLIAEVSIGLMVAALVATVWVRERRRRARGDRPAQAAMRDEE
Ga0302323_1006052391	3300031232	Fen	LNVLAHGGTPGLIGEISTGLLVAVVLAVVWIRERRRRAAQGERPEKAPMNE
Ga0307506_100322793	3300031366	Soil	HGRRALDPLAQVSLLAHGGTPGLIAEISIGLLVAGLLAGIWLRERRRRTRGERRSAASMR
Ga0307506_100462152	3300031366	Soil	VSLLAHGGTPGLIAEISIGLLVAGLLAGIWLRERRR
Ga0307506_100654372	3300031366	Soil	MTLLAHGGTPGLVAELAIGLLVGGVVAGVWLRERRRRARAERPAEAPMRE
Ga0302321_1023515202	3300031726	Fen	MSLLAHGGTPGLIAETSIGLFIGGVLAVVWLREQR
Ga0302321_1032538152	3300031726	Fen	PGLIGEISTGLLVAVVLAVVWIRERRRRAAQGERPEKAPMNE
Ga0315288_108838302	3300031772	Sediment	MNLLAHGGTPGLIAELSIGLFVGGLLAVVWFRDRRRRARG
Ga0315290_100336224	3300031834	Sediment	MNLLAHGGTPGLIAELSIGLFVGGLLAVVWFRERRRRARGARPARAPMRD
Ga0315290_100748462	3300031834	Sediment	MSLLAHGGTPGLVAETLIAVLVGGLLALVWFRERRRRARGERPPEAPMRE
Ga0315290_104046832	3300031834	Sediment	MTLLAHGGTPGLVAEASIALLVGGLLALVWFRERRRRTRGERPPEAPMRE
Ga0315290_106334383	3300031834	Sediment	GLIAELSIGLLVGGLLAVVWFRERRRRARGERPAQAPMRD
Ga0315290_110091202	3300031834	Sediment	MNLLAHGGTPGLIAEISIGLLVGGLLAVVWFRERRRRARGERPAQAPMRD
Ga0315290_113897712	3300031834	Sediment	MNLLAHGGTPGLIAETLIAMLVGGLLAFVWFRERRRRARVERPLLAPMRE
Ga0315290_114217182	3300031834	Sediment	MNLLAHGGTPGLIAEISLGLLVAGVLAVVWFRERRRRSRGERPSEAAMKE
Ga0315280_105357051	3300031862	Sediment	MNLLAHGGTPGLIAEVSLGLFVVGVLAVVWFRERRRR
Ga0315297_104923172	3300031873	Sediment	MNLLAHGGTPGLIAEVSIGLVVGGLLAVVWFRERRRRARGERPAQAPMRD
Ga0315297_107693082	3300031873	Sediment	MSLLAHGGTPGLIAEASIALLVGGVLALVWLRERRRRARGERPPEAPMRDET
Ga0315297_110561032	3300031873	Sediment	MNLLAHGGTAGLIAELSIGLLVGGLLAVVWFRERRRRARGERPAQAPMRD
Ga0302322_1004760862	3300031902	Fen	VNVLAHGGTPGLIGEISTGLLVAVVLAVVWIRERRRRAAQGERPEKAPMNE
Ga0302322_1005648532	3300031902	Fen	MSVLAHGGTPGLIAEVSIGLMVAALVAYVWVRERRRRARGERPTQAAMREEE
Ga0302322_1009127153	3300031902	Fen	RPLAAFSVMSLLAHGGTPGLIAETSIGLFIGGALAVVWLRERRRRARGERPPEAPMRE
Ga0315278_103589641	3300031997	Sediment	MTLLAHGGTPGLVAEASIALLVGGLLALVWFRERRRRTRGE
Ga0315278_111063822	3300031997	Sediment	MSLLAHGGTPGLIAETLIALLVGGLLALVWFRERRRRARGEHPPEAPMRE
Ga0315278_111600642	3300031997	Sediment	MSLLAHGETPGMIAEASIALLVGGVLALVWLRERRRRARGERPPEAPMRDET
Ga0315278_112982332	3300031997	Sediment	MSLLAHGGKQGLIAEVAIGLVVGGLLALVWFRERRRRARGERPAQAPMRD
Ga0315278_117932212	3300031997	Sediment	MNLLAHGGTPGLIAETLIALLVGGLLALVWFRERRRRARGERPPEAPMRV
Ga0315272_103393322	3300032018	Sediment	MSLLAHGGTPGLIAETSIALLVGGVLALVWLRERRRRARGERPPEAPMRDET
Ga0315277_116189031	3300032118	Sediment	PGLIAELSIGLFVGGLLAVVWFRERRRRARGARPARAPMRD
Ga0315292_101243142	3300032143	Sediment	MNLLAHGGTVGLIAEISIGLFVGGLLAVVWFRERRRRARGERPAQAPMRE
Ga0315292_102372362	3300032143	Sediment	MSLLAHGGIPGLIAEVSIGLLVGGVLAVVWFRERRRRARGERPARAPMND
Ga0315292_102799873	3300032143	Sediment	MNLLAHGGTPGLVAETLIALLVGGLLALVWFRERRRRARGERPPEAPMRE
Ga0315292_103327412	3300032143	Sediment	MSLLAHGGTSGLIAEVSLGLLVAGVLAVVWFRERRRRSRGERPSEAAMKE
Ga0315292_104571752	3300032143	Sediment	MSLLAHGGKQGLIAEVAIGLVVGGLLALVWFRERR
Ga0315292_113758091	3300032143	Sediment	MNLLAHGGTPGLIAEVSIGLVVGGLLAVVWFRERRRRARGERPAQAPMRE
Ga0315281_109480702	3300032163	Sediment	MTLLAHGGTPGLVAEASIALLVGGVLALVWFRERRRRTRGERPPEAPMRE
Ga0315283_104470651	3300032164	Sediment	LARMNLLAHGGAPGLIAEISLGLLVAGVLAVVWFRERRRRSRGERPSEAAMKE
Ga0315283_113045552	3300032164	Sediment	MSVLAHGGTPGLIAEVSIGLLVAGLLAVVWLRERRRRIRG
Ga0315283_115294291	3300032164	Sediment	MNLLAHGGTMGLIAEISIGLFVGGLLAVVWFRERRRRARGERPAQAPMRE
Ga0315283_123793752	3300032164	Sediment	MSLLAHGGTPGLIAEASIALLVGGVLALVWFRERRRRARGE
Ga0315268_104922732	3300032173	Sediment	MNLLAHGDTPGLIAEVSIGLVVGGLLAVVWFRERRRRARGARPARAPMRD
Ga0315268_122089392	3300032173	Sediment	MNVLAHGGTPGLIAELSIGLMVAALVAYVWVRERRRRARGERPQQAEM
Ga0315268_124025941	3300032173	Sediment	VNLLAHGGTPGLVAEVSIGLVVGGLLAVVWFRERRR
Ga0315271_105548673	3300032256	Sediment	IAEASIGLLVGGLLALVWFRERRRRARGERPREASMRD
Ga0315271_106883852	3300032256	Sediment	MSLLAHGGTPGLIAEVSIGLVVGGLLAVVWFRERRRRARGERPAQAPMRD
Ga0315286_114352782	3300032342	Sediment	MNLLAHGGTSGLIAEISLGLLVAGVLAVVWFRERRRRSRGERPSEAAMKE
Ga0315287_106070103	3300032397	Sediment	MSLLAHGGTQGLIAEVAIGLVIGGLLALVWFRERRRRARGERPAQAPMRD
Ga0315273_111687912	3300032516	Sediment	MSLLAHGGTPGMIAEASIALLVGGVLALVWLRERRRRARGERPPEAPMRDET
Ga0316622_1006361162	3300033416	Soil	MSVLAHGGTAGLIAEVSIGLLVAASLGLVWLREKRRRARGERPAAARMRDED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091064

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences