Metagenome / Metatranscriptome Family F091061

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091061
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	59 residues
Representative Sequence	MTIDERLEALTHSVELIAQMQLKTEKEIRQLGRYVRAIVLDHEARLLVLEADDKNEE
Number of Associated Samples	66
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.11 %
% of genes near scaffold ends (potentially truncated)	15.74 %
% of genes from short scaffolds (< 2000 bps)	73.15 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.259 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (74.074 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.074 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.53% β-sheet: 0.00% Coil/Unstructured: 36.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00391	PEP-utilizers	15.74
PF03966	Trm112p	9.26
PF04775	Bile_Hydr_Trans	6.48
PF00291	PALP	5.56
PF09095	AmyA-gluTrfs_C	3.70
PF13801	Metal_resist	2.78
PF01326	PPDK_N	1.85
PF06379	RhaT	1.85
PF02452	PemK_toxin	1.85
PF12704	MacB_PCD	1.85
PF08840	BAAT_C	1.85
PF05685	Uma2	1.85
PF00930	DPPIV_N	0.93
PF04551	GcpE	0.93
PF12838	Fer4_7	0.93
PF07927	HicA_toxin	0.93
PF02899	Phage_int_SAM_1	0.93
PF11994	DUF3489	0.93
PF01433	Peptidase_M1	0.93
PF00977	His_biosynth	0.93
PF00326	Peptidase_S9	0.93
PF02178	AT_hook	0.93
PF01814	Hemerythrin	0.93
PF00311	PEPcase	0.93
PF10096	DUF2334	0.93
PF01850	PIN	0.93
PF00589	Phage_integrase	0.93
PF01909	NTP_transf_2	0.93
PF08450	SGL	0.93
PF02954	HTH_8	0.93
PF13620	CarboxypepD_reg	0.93
PF14659	Phage_int_SAM_3	0.93
PF13817	DDE_Tnp_IS66_C	0.93
PF08531	Bac_rhamnosid_N	0.93
PF08264	Anticodon_1	0.93
PF01384	PHO4	0.93
PF00106	adh_short	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	1.85
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.85
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	1.85
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.93
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.93
COG0821	4-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpE	Lipid transport and metabolism [I]	0.93
COG0823	Periplasmic component TolB of the Tol biopolymer transport system	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.93
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.93
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	0.93
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.93
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.93
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.93
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.26 %
Unclassified	root	N/A	15.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.26 %
Unclassified	root	N/A	15.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.26 %
Unclassified	root	N/A	15.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.26 %
Unclassified	root	N/A	15.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.33 %
Thermodesulfobacteria	phylum	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.11 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8.33 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %
Thermodesulfobacteria	class	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.41 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	7.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.78 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.85 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.93 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.93 %
Thermodesulfobacteriales	order	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.41 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	7.41 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.78 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.93 %
Thermodesulfobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae	0.93 %
Thermoanaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	0.93 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.89 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	7.41 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.78 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	1.85 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.93 %
Thermoanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	0.93 %
Thermodesulfobacterium	genus	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae → Thermodesulfobacterium	0.93 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.89 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	7.41 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	2.78 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	1.85 %
Thermodesulfobacterium hveragerdense	species	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae → Thermodesulfobacterium → Thermodesulfobacterium hveragerdense	0.93 %
Moorella group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Moorella group	0.93 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.93 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.89 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	7.41 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	2.78 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	1.85 %
Moorella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Moorella group → Moorella	0.93 %
Thermodesulfobacterium hveragerdense	species	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae → Thermodesulfobacterium → Thermodesulfobacterium hveragerdense	0.93 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.93 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10012841	Not Available	5473	Open in IMG/M
3300001356\|JGI12269J14319_10358057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300004152\|Ga0062386_101016968	All Organisms → cellular organisms → Bacteria → Thermodesulfobacteria → Thermodesulfobacteria → Thermodesulfobacteriales → Thermodesulfobacteriaceae → Thermodesulfobacterium → Thermodesulfobacterium hveragerdense	687	Open in IMG/M
3300004478\|Ga0068972_1535334	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300004633\|Ga0066395_10742809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	585	Open in IMG/M
3300005332\|Ga0066388_102200352	Not Available	995	Open in IMG/M
3300009510\|Ga0116230_10002099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19197	Open in IMG/M
3300009630\|Ga0116114_1048596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1202	Open in IMG/M
3300009630\|Ga0116114_1174694	Not Available	540	Open in IMG/M
3300009637\|Ga0116118_1117541	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	881	Open in IMG/M
3300009639\|Ga0116122_1273457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300009640\|Ga0116126_1019668	All Organisms → cellular organisms → Bacteria	2996	Open in IMG/M
3300009700\|Ga0116217_10007695	All Organisms → cellular organisms → Bacteria	9232	Open in IMG/M
3300010048\|Ga0126373_10137040	Not Available	2310	Open in IMG/M
3300010048\|Ga0126373_12088011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	629	Open in IMG/M
3300010341\|Ga0074045_10576848	Not Available	719	Open in IMG/M
3300010358\|Ga0126370_11011556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	759	Open in IMG/M
3300010361\|Ga0126378_10011619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	7238	Open in IMG/M
3300010376\|Ga0126381_101325113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1041	Open in IMG/M
3300010379\|Ga0136449_100464803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2213	Open in IMG/M
3300010398\|Ga0126383_10000328	All Organisms → cellular organisms → Bacteria	25381	Open in IMG/M
3300010398\|Ga0126383_10012521	Not Available	6229	Open in IMG/M
3300012971\|Ga0126369_12078304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	656	Open in IMG/M
3300014151\|Ga0181539_1093764	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1279	Open in IMG/M
3300014155\|Ga0181524_10487813	All Organisms → cellular organisms → Bacteria → Terrabacteria group	525	Open in IMG/M
3300014159\|Ga0181530_10011086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7814	Open in IMG/M
3300014161\|Ga0181529_10174688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300014162\|Ga0181538_10329672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300014164\|Ga0181532_10666896	Not Available	562	Open in IMG/M
3300014200\|Ga0181526_10728686	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300014655\|Ga0181516_10763428	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300014658\|Ga0181519_10694178	All Organisms → cellular organisms → Bacteria → Terrabacteria group	628	Open in IMG/M
3300014838\|Ga0182030_10935100	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300016705\|Ga0181507_1416409	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300016750\|Ga0181505_10185579	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300017822\|Ga0187802_10063545	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300017931\|Ga0187877_1131831	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300017935\|Ga0187848_10324843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300017935\|Ga0187848_10406202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	561	Open in IMG/M
3300017943\|Ga0187819_10034669	All Organisms → cellular organisms → Bacteria → Acidobacteria	2983	Open in IMG/M
3300017943\|Ga0187819_10207788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1154	Open in IMG/M
3300017955\|Ga0187817_11013306	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300017972\|Ga0187781_10007262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8115	Open in IMG/M
3300017972\|Ga0187781_10026138	All Organisms → cellular organisms → Bacteria	4040	Open in IMG/M
3300017972\|Ga0187781_10053773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2769	Open in IMG/M
3300017972\|Ga0187781_10157806	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300017972\|Ga0187781_10591879	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300017972\|Ga0187781_10770040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Moorella group → Moorella	698	Open in IMG/M
3300017972\|Ga0187781_11400509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	517	Open in IMG/M
3300017975\|Ga0187782_10039969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3414	Open in IMG/M
3300017975\|Ga0187782_10053060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2951	Open in IMG/M
3300017975\|Ga0187782_10416837	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300017975\|Ga0187782_11288829	All Organisms → cellular organisms → Bacteria → Terrabacteria group	573	Open in IMG/M
3300017988\|Ga0181520_10279597	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300018008\|Ga0187888_1079748	Not Available	1429	Open in IMG/M
3300018014\|Ga0187860_1245230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	713	Open in IMG/M
3300018016\|Ga0187880_1160133	Not Available	1049	Open in IMG/M
3300018042\|Ga0187871_10249378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300018058\|Ga0187766_10659496	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300018062\|Ga0187784_10247309	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300018062\|Ga0187784_11298084	All Organisms → cellular organisms → Bacteria → Terrabacteria group	577	Open in IMG/M
3300018062\|Ga0187784_11695586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	500	Open in IMG/M
3300018085\|Ga0187772_11467184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	507	Open in IMG/M
3300018086\|Ga0187769_10241588	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300018086\|Ga0187769_10644223	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300018088\|Ga0187771_10008272	All Organisms → cellular organisms → Bacteria	7457	Open in IMG/M
3300018088\|Ga0187771_10290369	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300018088\|Ga0187771_10614236	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300018088\|Ga0187771_10874056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	763	Open in IMG/M
3300018088\|Ga0187771_11065630	Not Available	686	Open in IMG/M
3300018090\|Ga0187770_10140240	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300018090\|Ga0187770_10425266	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300018090\|Ga0187770_11219574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300018090\|Ga0187770_11597903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	532	Open in IMG/M
3300019273\|Ga0187794_1768318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300019284\|Ga0187797_1446386	Not Available	734	Open in IMG/M
3300021476\|Ga0187846_10023308	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300027625\|Ga0208044_1012153	All Organisms → cellular organisms → Bacteria	3258	Open in IMG/M
3300027703\|Ga0207862_1032518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1569	Open in IMG/M
3300027807\|Ga0209208_10271687	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300027825\|Ga0209039_10093656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300027854\|Ga0209517_10487406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300029954\|Ga0311331_11390867	Not Available	579	Open in IMG/M
3300032261\|Ga0306920_102376679	Not Available	732	Open in IMG/M
3300032783\|Ga0335079_12237238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	521	Open in IMG/M
3300032805\|Ga0335078_10895213	Not Available	1067	Open in IMG/M
3300032892\|Ga0335081_10050846	Not Available	6494	Open in IMG/M
3300033402\|Ga0326728_10000584	All Organisms → cellular organisms → Bacteria	141276	Open in IMG/M
3300033402\|Ga0326728_10002802	All Organisms → cellular organisms → Bacteria	56860	Open in IMG/M
3300033402\|Ga0326728_10002885	All Organisms → cellular organisms → Bacteria	55733	Open in IMG/M
3300033402\|Ga0326728_10007423	All Organisms → cellular organisms → Bacteria	28141	Open in IMG/M
3300033402\|Ga0326728_10025106	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10709	Open in IMG/M
3300033402\|Ga0326728_10079392	All Organisms → cellular organisms → Bacteria	4229	Open in IMG/M
3300033402\|Ga0326728_10292988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1494	Open in IMG/M
3300033402\|Ga0326728_10639234	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300033402\|Ga0326728_10747194	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300033405\|Ga0326727_10021922	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12418	Open in IMG/M
3300033405\|Ga0326727_10271624	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300033405\|Ga0326727_10367525	All Organisms → cellular organisms → Bacteria → Acidobacteria	1348	Open in IMG/M
3300033405\|Ga0326727_10377751	Not Available	1319	Open in IMG/M
3300033977\|Ga0314861_0000491	All Organisms → cellular organisms → Bacteria → Acidobacteria	62886	Open in IMG/M
3300033977\|Ga0314861_0024028	All Organisms → cellular organisms → Bacteria → Acidobacteria	3762	Open in IMG/M
3300033977\|Ga0314861_0084305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1657	Open in IMG/M
3300033977\|Ga0314861_0090015	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300033977\|Ga0314861_0098366	Not Available	1499	Open in IMG/M
3300033977\|Ga0314861_0116236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1345	Open in IMG/M
3300033977\|Ga0314861_0325767	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	687	Open in IMG/M
3300033977\|Ga0314861_0455719	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.37%
Aquatic	Environmental → Aquatic	27.78%
Plants	Host-Associated → Plants	1.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.48%
Freshwater	Environmental → Aquatic → Freshwater	27.78%
Peat	Environmental → Terrestrial → Peat	12.96%
Peat Moss	Host-Associated → Plants → Peat Moss	1.85%
Cave	Environmental → Terrestrial → Cave	0.93%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	38.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.96%
Loam	Environmental → Terrestrial → Soil → Loam	2.78%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.85%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	37.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	19.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	25.00%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	12.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	9.26%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	9.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.41%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.63%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.85%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.93%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.93%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019273	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100128413	3300000567	Peatlands Soil	MTIEEQLATLTRSVELIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEDKSEG*
JGI12269J14319_103580573	3300001356	Peatlands Soil	ILNEETSMTIEEQLATLTRSVELIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEDKSEG*
Ga0062386_1010169681	3300004152	Bog Forest Soil	MNIDERLEALTQSVELIAQMQVKTEKEIRRLGRYVRIIVLDHEARLLALEGDDEEGDKGNETP*
Ga0068972_15353341	3300004478	Peatlands Soil	MNLDERLEALTHSVELIAQMQIKTEKEIRQLGRYARVIVLDHEARLLALEKDEGDSA*
Ga0066395_107428093	3300004633	Tropical Forest Soil	PEKTIDERLEALTHSVELLAQMQIKTEKEIRRLGRYVRMIVLDHEARLLALEGDEGDDAE
Ga0066388_1022003522	3300005332	Tropical Forest Soil	MTIDERLEALTQTVELLAGMQIKTEKQISRLGKYIRLIVLDHEARLLALEGDDEEDKT*
Ga0116230_1000209925	3300009510	Host-Associated	MDIDERLEALTHSVELIAAMQLKTEKEIKRLARYVRTIVVDHEQRLAALEGDDDEG*
Ga0116114_10485961	3300009630	Peatland	TLMTIDERLETLTHSVELIAQMQIKSEESQLKTEKEIRKLGRFVRAIVLDHEARLLVLEQEDKNEG*
Ga0116114_11746942	3300009630	Peatland	MTIDEQLEALTRSVQLIAQMQAKSEEEIRTLGRYIRAIVLDHEARLLVLEQEGQSKD*
Ga0116118_11175411	3300009637	Peatland	TRSVQLIAQMQAKSEEEIRTLGRYIRAIVLDHEARLLVLEQEGQSKD*
Ga0116122_12734572	3300009639	Peatland	MSIDERLEALTHSVELIAQMQLKTEKEIRQLGRYVRVIVLDHEARLLALEKTDGDGE*
Ga0116126_10196683	3300009640	Peatland	MTIEEQLATLTRSVESIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEDKNEG*
Ga0116217_100076955	3300009700	Peatlands Soil	MTIEEQLATLTRSVELIAQMQAKTENEIRTLGRYIHAIVLDHEARLLVLEQEDKSEG*
Ga0126373_101370403	3300010048	Tropical Forest Soil	MEEQPKPTIDQRLEAIAQSVELLAGMQIKTEKSINRLGRYIRVIVRDHEERLAALEGDEDDE*
Ga0126373_120880112	3300010048	Tropical Forest Soil	MTPEERLEALTHSVELLAQMQIKTEKEIRRLGRYVRIIAIDHEQRLAALEGDEDE*
Ga0074045_105768481	3300010341	Bog Forest Soil	MTIDERLESITQRLEALTQSVELIAQMQIKSEESQLKTEKEIRKLGRFVRAIVLDHESRLLSLEKDDGDTE*
Ga0126370_110115562	3300010358	Tropical Forest Soil	MPEDKPPKTIDERLEALTHSVELIAGMQLKTEKEIRRLGRYVRMIVLDHEARLLALEGDDEDEEQ*
Ga0126378_1001161913	3300010361	Tropical Forest Soil	MSEEKPKKTIDERLEALAQSVELLAAMQIKTEKEIRRLGRYVRVIVLDHEARLLALESDDGDEEAGR*
Ga0126381_1013251133	3300010376	Tropical Forest Soil	MSENERLENLDRRLEALTHSLELLAQMQIKTDKQIRRLGRYVRTIAVDHEQRLAALEGDEDDE*
Ga0136449_1004648032	3300010379	Peatlands Soil	MTMSIDERLEALTHSVELIAQMQLKTEKEIRQLGRYVRVIVLDHEARLLALEKTDGDDD*
Ga0126383_1000032831	3300010398	Tropical Forest Soil	MSDTPNAPGKPEKTIDERLEALTHSVELLAEMQIKTEKEIRRLGRYVRMIVLDHEARLLAMEGNDEDE*
Ga0126383_100125213	3300010398	Tropical Forest Soil	MSEPEKPEKTIDERLEALTHSVELLAQMQIKTEKEIRRLGRYVRMIVLDHEARLLALEGDEGDDAE*
Ga0126369_120783042	3300012971	Tropical Forest Soil	MSEPEKPEKTTDERLEALTHSVELLAQMQIKTEKEIRRLGRYVRMIVLDHEARLLALEGDEGDDAE*
Ga0181539_10937642	3300014151	Bog	MTIDERLEALTHSLELVAQMQLKTEKEIRELGRYVRAIVLDHEARLLVLEEEDKGKG*
Ga0181524_104878132	3300014155	Bog	MTIEEQLATLTRSVESIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEDKSEG*
Ga0181530_100110862	3300014159	Bog	MTIEEQLATLTRSVESIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQDDKNEG*
Ga0181529_101746882	3300014161	Bog	MTIEEQLANLTRAVELIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEDKSEG*
Ga0181538_103296722	3300014162	Bog	MTIDERLETLTHSVELIAQMQIKSEESQLKTEKEIRKLGRFVRAIVLDHEARLLALEKNDDDSD*
Ga0181532_106668962	3300014164	Bog	MTIDERLEALTHSVELIAQMQIKSEESQLKTEKEIRKLGRFVRAIVLDHESRLLALEKNDEDIDE*
Ga0181526_107286863	3300014200	Bog	GDTAMSIDERLEALTHSVELIAQMQLKTEKEIRQLGRYVRVIVLDHESRLLALEKNEGDSD*
Ga0181516_107634281	3300014655	Bog	MSIDDRLEALPHSVELNAQMQLKTEKEIRQLGRYVRVIVLDHESRLLALEKGEEDSD*
Ga0181519_106941781	3300014658	Bog	MTIEEQLANLTRSVELIAQMQAKTENEIRTLGRYIRAIVLDHEARL
Ga0182030_109351002	3300014838	Bog	MSIDERLEALTHSVELIAQMQLKTEKEIRQLGRYARVIVLDHEARLLALEKNEGDDD*
Ga0181507_14164092	3300016705	Peatland	MSIDERLEALTHSVELIAQMQLKTEKEIRQLGRYVRVIVLDHESRLLALEKNEGDSD
Ga0181505_101855792	3300016750	Peatland	MTNEEQLANLTRSVELIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEDKSEG
Ga0187802_100635452	3300017822	Freshwater Sediment	MTIDERLEALTHALELVAQMQLKTEKEIHTLGRYIRAIVLDHEARLLVMEGDDNTEG
Ga0187877_11318312	3300017931	Peatland	MTIDEQLEALTRSVQLIAQMQAKSEEEIRTLGRYIRAIVLDHEARLLVLEQEGQSKD
Ga0187848_103248432	3300017935	Peatland	MTIDERLEALTHSVELIAQMQIKSEESQLKTEKEIRKLGRFVRAIVLDHEARLLALEKNDEDSDE
Ga0187848_104062022	3300017935	Peatland	MGIDERLEALTHSVGLIAQMQLKTEKEIRQLGRYVRVIVLDHEARLLALEKPEEDND
Ga0187819_100346694	3300017943	Freshwater Sediment	MTIDERLEALTHSLELVAQTQLKTEKEIHTLGRYIRAIVLDHEARLLVMEGEDQTEG
Ga0187819_102077881	3300017943	Freshwater Sediment	MTIDERLEALTHSLELVAQMQLKTEKEIRELGRYVRAIVLDHEARLLVLEEEDKGKD
Ga0187817_110133061	3300017955	Freshwater Sediment	MSIDERLEALTHSVELNAQMQVKTEKEIRQLGRYVRVIVLDREARLLALEKDDGDGD
Ga0187781_100072625	3300017972	Tropical Peatland	MTIDERLEALTHSVELIAQMQLKTEKEIRQLGRYVRAIVLDHEARLLVLEADDKNEE
Ga0187781_100261382	3300017972	Tropical Peatland	MTIEEQLEALTRSVQLIAQMQAKTEQEIRTLGRYIRAIVLDHEARLLVLEQEDKDND
Ga0187781_100537732	3300017972	Tropical Peatland	MTIDEQLEALTRSVQMIAQMQLKTEKEIHTLGRYIRAIVLDHEARLLVLEGDDKGEGQ
Ga0187781_101578062	3300017972	Tropical Peatland	MTIEERLEAITQRLDGLTQSVELLSRMQIKTEKEIRRLGRYVRIIVMDHEARLAALEGEDEEDNPATT
Ga0187781_105918791	3300017972	Tropical Peatland	MTIDEQLEALTHSVELIAQAQLKTEKEIHTLGRYIRAIVLDHEARLLVLEGTEKDKD
Ga0187781_107700401	3300017972	Tropical Peatland	MMTIDERLETLTHSVELIAQMQIKTEEAQLKTQKEIRRLGRFVRTIVLDHES
Ga0187781_114005092	3300017972	Tropical Peatland	MTIDDRLEALTHSVELIAQMQIKTEKEIRILGRYIRVIVLDHEARLLALEKEDGDSD
Ga0187782_100399692	3300017975	Tropical Peatland	MTIDEQLESLARSVEMIAQMQAKTENEICTLGRYIRAIVLDHEARLLVLEQEDKTGE
Ga0187782_100530603	3300017975	Tropical Peatland	MMTIDERLEALTHSVELIAQMQIKTEEAQLKTQKEIRRLGRFVRTIVLDHESRLLALEKDDEDHD
Ga0187782_104168372	3300017975	Tropical Peatland	MTIDERLEALTQALESVAQMQLKTEKEIHTLGRYIRAIVLDHEARLLVMEGDDQTEG
Ga0187782_112888292	3300017975	Tropical Peatland	MTLDERLEALTHALELVAQMQLKSEKELHTLGRYIRAIVLDHEARLLVMEGDGQAEG
Ga0181520_102795972	3300017988	Bog	MTIDERLEALTHSVELIAQMQIKSEESQLKTEKEIRKLGRFVRAIVLDHEARLLALEKTDEDSD
Ga0187888_10797482	3300018008	Peatland	MTIDEQLEALTRSVQLIAQMQAKSEEEIRTLGRYIRAIVLDHEARLLVLE
Ga0187860_12452302	3300018014	Peatland	ITMTIDEQLEALTRSVQLIAQMRAKSEEEIRTLGRYIRAIVLDHEARLLVLEQEGQSKD
Ga0187880_11601332	3300018016	Peatland	MTFDEQLEALTRSVQLIAQMQAKTEEEIRTLGRYIRAIVLDHEARLLVLEQEDQSKD
Ga0187871_102493781	3300018042	Peatland	MTIDERLEALTHSVELIAQMQIKSEESQIKTEKEIRKLGRFVRAIVLDHEARLLALEKTDEDSD
Ga0187766_106594961	3300018058	Tropical Peatland	LQQKGEERLLRIDERLEGLTQTVELLGQMQIKTEKEIRKLGRHVRTIVLDHEARLLALEGEKEDEEEG
Ga0187784_102473092	3300018062	Tropical Peatland	MTIEERLEAITQRLDGLTQSVELLSRMQIKTEKEIRRLGRYVRIIVMDHEARLAALEGVDEEDNPATT
Ga0187784_112980842	3300018062	Tropical Peatland	MTIDEQLETLARSVQLIAQMQAKTEEEIRTLGRYIRAIVLDHEARLLVLEQEDKTED
Ga0187784_116955861	3300018062	Tropical Peatland	MTIDERLEALTHSVELIAQMQLKTEKEIRKLGRFVRAIVLDHEARLLALEDGDKDED
Ga0187772_114671841	3300018085	Tropical Peatland	MTIDEQLANLTRSVELIAQMQAKTEKEILTLGRYIRAIVLDHEARLLVLEQEDQSEE
Ga0187769_102415881	3300018086	Tropical Peatland	MTIDDRLEALTHSVELIAQMQIKTEEEIRKLGRYVRVIVLDHEARLLAVEKEDGESD
Ga0187769_106442231	3300018086	Tropical Peatland	MTIDEQLEALTRSVQLIAQMQLKTEKEIHTLGRYIRAIVLDHEARLLVLEGDDKGEGQ
Ga0187771_100082721	3300018088	Tropical Peatland	MTIDERLEALTHSLELVAQMQLKTEKEIHTLGRYIRAIVLDHEARLLVMEGEDKG
Ga0187771_102903692	3300018088	Tropical Peatland	MTIDERLEALTHSVELIAQMQIKTEEAQLKTEKEIRKLGRYMRAIVLDHEARLLALEKNDGDSD
Ga0187771_106142363	3300018088	Tropical Peatland	MTIDERLEALTHSVELNAQIQVKTEKEIRQLGRYVRVIVLDHEARLLELEKNDGDNE
Ga0187771_108740561	3300018088	Tropical Peatland	TMTIDEQLQALTRSVELIAQMQAKTEQEIRTLGRYIRAIVLDHEARLLVLEQEDKNND
Ga0187771_110656301	3300018088	Tropical Peatland	MTIDERLEALTHSVELIAQAQLKTEKEIHTLGRYIRAIVLDHEARLLVLEGGDKDKD
Ga0187770_101402401	3300018090	Tropical Peatland	MTIDERLEALTHSVELIAQAQLKTEKEIHTLGRYIRAIVLDHEARLLVLEGGEKD
Ga0187770_104252661	3300018090	Tropical Peatland	MSIDERLEALTQSVNLIAQMQVKTEKEIRKLGRFVRTIVLDHEAGLLTLEGEDKEEE
Ga0187770_112195741	3300018090	Tropical Peatland	MTIDERLEALTQALESVAQMQLKTEKEIHTLGRYIRAIVLDHEARL
Ga0187770_115979032	3300018090	Tropical Peatland	MTIDEQLESLTRSVELIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEDKTEE
Ga0187794_17683181	3300019273	Peatland	RMTIDERLEALTHSVELIAQMQIKTEEAQIKTQKEIRKLGRYIRVIVLDHEARLLALEKNDGDSDE
Ga0187797_14463862	3300019284	Peatland	MTIDEQLEALTRSVQLIAQMQLKTEKEIHTLGRYIRAIVLDHEARLLVLEGEDKGEGQ
Ga0187846_100233082	3300021476	Biofilm	MTIDERLEALTHSVELIAQMQLRTEKEIRKLGRYVRAIVLDHEARLLALEGDNNEDEQ
Ga0208044_10121532	3300027625	Peatlands Soil	MTIEEQLATLTRSVELIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEDKSEG
Ga0207862_10325182	3300027703	Tropical Forest Soil	MNIDERLEALTQSVELIAQMQVKTEKEIRRLGRYVRIIVLDHEARLLALEGDDEEGDKGNETP
Ga0209208_102716872	3300027807	Host-Associated	MDIDERLEALTHSVELIAAMQLKTEKEIKRLARYVRTIVVDHEQRLAALEGDDDEG
Ga0209039_100936562	3300027825	Bog Forest Soil	EQLESLTRSVQLIAQMQAKTEDEIRTLGRYIRAIVLDHEARLLVLEQEDKSEG
Ga0209517_104874061	3300027854	Peatlands Soil	MNLDERLEALTHSVELIAQMQIKTEKEIRQLGRYARVIVLDHEARLLALEKDEGDSA
Ga0311331_113908672	3300029954	Bog	VAEQEPNKPPKTIDERLEALAHSVELIAHMQVKTEKEIRRLGRLVRTIIFDHEARLLQLEGGEEEEEDG
Ga0306920_1023766791	3300032261	Soil	MTIDERLETLTGSVELIAQMQLKTEEEQLKTQKEIRKLGHHIRTIVLDHEARLLALEGTDDDND
Ga0335079_122372381	3300032783	Soil	MTIDEQLATLTRSVQLIAQMQAKTEEEIRTLGRYIRAIVLDHEARLLVLEQEDQSKD
Ga0335078_108952132	3300032805	Soil	HSSKGTTMTIDERLEALTQALESVAQMQLKTEKEIHTLGRYIRAIVLDHEARLLVMEGEDKSED
Ga0335081_100508467	3300032892	Soil	MSIDERLEALTHSVELLAGMHRDTESEIRRTQKEIRRLGRYVRMIAIDHEGRLLRLEGEEEDDDPAEASGNGH
Ga0326728_100005842	3300033402	Peat Soil	MTIDERLEALTHSVELIAQMQIKSEESQLKTEKEIRKLSRFVRAIVLDHESRLLALEKTDEDSA
Ga0326728_1000280227	3300033402	Peat Soil	MNLDERLEALTHSVKLIAQMLLKAENEIRKLGRYVRVMVLDHEARLLALEKNEGDSN
Ga0326728_1000288521	3300033402	Peat Soil	MTIEEQLATLTRSVELIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEEKSEG
Ga0326728_100074234	3300033402	Peat Soil	MTIEEQLESLTRSVELIAQMQAKTEKEIRTLGRYIRAIVLDHEARLLVLEQEDKSED
Ga0326728_100251064	3300033402	Peat Soil	MTIEEQLATLTRSVESIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEDKSEG
Ga0326728_100793922	3300033402	Peat Soil	MTIDEQLEALTRSVQLIAQMQVKTEKEIHTLGRYIRAIVLDHEARLLVLEGENKGED
Ga0326728_102929882	3300033402	Peat Soil	MTIDERLEALTHSVELIAQIQIKSEESQIKTEKEIRKLGRFVRAIVLDHEARLLALEKNDEDGD
Ga0326728_106392342	3300033402	Peat Soil	MTIDERLQALTHSVELIAQVQLKTEKEIRQLVRYVRTIVLDHEARLLVLEGDDKDKD
Ga0326728_107471942	3300033402	Peat Soil	MSIDERLEALTHSVELIAQMQLKTEKEIRQLGRYVRVIALDHEARLLALEKNEGDGD
Ga0326727_100219222	3300033405	Peat Soil	MTIEEQLATLTRSVESIAQMQAKTENEIRTLGRYIRAIVLDHEARLLVLEQEDKNEG
Ga0326727_102716242	3300033405	Peat Soil	MTIDERLEALTHSVELIAQMQIKSEESQIKTEKEIRKLGRFVRAIVLDHEARLLALEKNDEDGD
Ga0326727_103675253	3300033405	Peat Soil	LEALTHSVELIAQMQLKTEKEIRQLGRYVRVTALDHEARLLAREKNEGDGD
Ga0326727_103777511	3300033405	Peat Soil	MTIDERLVALTQSVELIAQMQLKTEKEIRTLGRFVRTIVLDHESRLLALENSGEDND
Ga0314861_0000491_26139_26312	3300033977	Peatland	MTIDGRLEALTHSVELVAQMQLKTEKEIRKLGRYVRAIVLDHEARLLALEGDDKDED
Ga0314861_0024028_1414_1608	3300033977	Peatland	MIPGDTKMGIDDRLEALTHSVELIAQMQLKTEKEIRQLGRYVRVIALGHEARLLALEKDDGDTE
Ga0314861_0084305_587_760	3300033977	Peatland	MSIDERLEALTHSVELVAQMQLKTEKEIRRLGRYVRAIVLDHEARLLALEGDDKDED
Ga0314861_0090015_1387_1560	3300033977	Peatland	MTIDERLEALTHSLELVAQMQLKTEKEIRELGRYVRAIVLDHEARLLVLEEEDKGKG
Ga0314861_0098366_917_1114	3300033977	Peatland	MIAQKEKTMTIDERLEALTHSVELIAQMQLKTEKEIRKLGRYVRAIVLDHEARLLALEDEDKDED
Ga0314861_0116236_706_882	3300033977	Peatland	MTIDERLEALTHSVELTAQMQIKTEKEIRKLGRYMCVIVFDHEASLPALEKNDGDGDA
Ga0314861_0325767_299_472	3300033977	Peatland	MTIDERLEALTHSVELIAQAQLKTEKEIHTLGRYIRAIVLDHEARLLVLEGGEKDKD
Ga0314861_0455719_173_346	3300033977	Peatland	MSIDERLEALTHSVELIVQMQVKTEKEIRTLGRYVRAIVLDHEARLLVLEGDDKDED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091061

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences