Metagenome Family F091017

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091017
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	101 residues
Representative Sequence	MLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAD
Number of Associated Samples	77
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	65.38 %
% of genes near scaffold ends (potentially truncated)	36.11 %
% of genes from short scaffolds (< 2000 bps)	80.56 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.963 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.667 % of family members)
Environment Ontology (ENVO)	Unclassified (74.074 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.852 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.15% β-sheet: 42.27% Coil/Unstructured: 52.58%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00034	Cytochrom_C	13.89
PF01135	PCMT	9.26
PF00582	Usp	4.63
PF04542	Sigma70_r2	2.78
PF00702	Hydrolase	2.78
PF00011	HSP20	1.85
PF00690	Cation_ATPase_N	1.85
PF00072	Response_reg	0.93
PF03729	DUF308	0.93
PF00122	E1-E2_ATPase	0.93
PF07485	DUF1529	0.93
PF05139	Erythro_esteras	0.93
PF07732	Cu-oxidase_3	0.93
PF16576	HlyD_D23	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	9.26
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	9.26
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	9.26
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	9.26
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	2.78
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.78
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.78
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.85
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.93
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	0.93
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.93
COG2312	Erythromycin esterase homolog	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
All Organisms	root	All Organisms	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
cellular organisms	root	All Organisms → cellular organisms	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	6.48 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	4.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.70 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	6.48 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	4.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.85 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	6.48 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	4.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.85 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.96 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	6.48 %
Rhizobiales bacterium 64-17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	4.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.85 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_11192117	Not Available	648	Open in IMG/M
3300000956\|JGI10216J12902_103412384	Not Available	764	Open in IMG/M
3300001431\|F14TB_104939658	Not Available	624	Open in IMG/M
3300004633\|Ga0066395_10617010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300005332\|Ga0066388_100227348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2497	Open in IMG/M
3300005332\|Ga0066388_102496273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	939	Open in IMG/M
3300005332\|Ga0066388_103061302	Not Available	854	Open in IMG/M
3300005471\|Ga0070698_101623541	Not Available	599	Open in IMG/M
3300005764\|Ga0066903_100487153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2082	Open in IMG/M
3300005764\|Ga0066903_101052318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1494	Open in IMG/M
3300009094\|Ga0111539_11757825	Not Available	719	Open in IMG/M
3300009100\|Ga0075418_12235604	Not Available	596	Open in IMG/M
3300010048\|Ga0126373_10959133	Not Available	920	Open in IMG/M
3300010358\|Ga0126370_10770525	Not Available	854	Open in IMG/M
3300010360\|Ga0126372_13058954	Not Available	519	Open in IMG/M
3300010361\|Ga0126378_11998140	Not Available	661	Open in IMG/M
3300010366\|Ga0126379_11976126	Not Available	686	Open in IMG/M
3300010376\|Ga0126381_100904502	Not Available	1270	Open in IMG/M
3300010376\|Ga0126381_104336097	Not Available	549	Open in IMG/M
3300010398\|Ga0126383_12672730	Not Available	582	Open in IMG/M
3300012205\|Ga0137362_10878920	Not Available	766	Open in IMG/M
3300012209\|Ga0137379_10883635	Not Available	798	Open in IMG/M
3300012923\|Ga0137359_10066608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3145	Open in IMG/M
3300012971\|Ga0126369_10062520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3231	Open in IMG/M
3300016270\|Ga0182036_10140354	All Organisms → cellular organisms → Bacteria → Proteobacteria	1706	Open in IMG/M
3300016270\|Ga0182036_11126107	Not Available	651	Open in IMG/M
3300016294\|Ga0182041_11160251	Not Available	703	Open in IMG/M
3300016294\|Ga0182041_11326005	Not Available	659	Open in IMG/M
3300016294\|Ga0182041_11584896	Not Available	604	Open in IMG/M
3300016319\|Ga0182033_10070619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2458	Open in IMG/M
3300016371\|Ga0182034_10021259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3888	Open in IMG/M
3300016371\|Ga0182034_10467368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1047	Open in IMG/M
3300016387\|Ga0182040_10186736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1512	Open in IMG/M
3300016387\|Ga0182040_10499167	Not Available	972	Open in IMG/M
3300016404\|Ga0182037_10815629	Not Available	805	Open in IMG/M
3300016404\|Ga0182037_11606668	Not Available	578	Open in IMG/M
3300016422\|Ga0182039_12229638	Not Available	505	Open in IMG/M
3300016445\|Ga0182038_10480311	Not Available	1057	Open in IMG/M
3300018468\|Ga0066662_10171821	Not Available	1672	Open in IMG/M
3300021560\|Ga0126371_10052638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	3901	Open in IMG/M
3300027874\|Ga0209465_10236651	Not Available	913	Open in IMG/M
3300027898\|Ga0209067_10637665	Not Available	614	Open in IMG/M
3300031543\|Ga0318516_10037258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2595	Open in IMG/M
3300031543\|Ga0318516_10164809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1274	Open in IMG/M
3300031543\|Ga0318516_10167019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1265	Open in IMG/M
3300031544\|Ga0318534_10540830	Not Available	664	Open in IMG/M
3300031545\|Ga0318541_10043389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2284	Open in IMG/M
3300031546\|Ga0318538_10030734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2499	Open in IMG/M
3300031564\|Ga0318573_10283002	All Organisms → cellular organisms → Bacteria → Proteobacteria	887	Open in IMG/M
3300031573\|Ga0310915_10118493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1805	Open in IMG/M
3300031573\|Ga0310915_10476511	Not Available	887	Open in IMG/M
3300031640\|Ga0318555_10741469	Not Available	530	Open in IMG/M
3300031668\|Ga0318542_10138470	Not Available	1202	Open in IMG/M
3300031668\|Ga0318542_10381185	Not Available	727	Open in IMG/M
3300031713\|Ga0318496_10665421	Not Available	575	Open in IMG/M
3300031724\|Ga0318500_10059524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1648	Open in IMG/M
3300031744\|Ga0306918_10109849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1979	Open in IMG/M
3300031764\|Ga0318535_10055617	Not Available	1663	Open in IMG/M
3300031770\|Ga0318521_10194017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1171	Open in IMG/M
3300031771\|Ga0318546_10580385	Not Available	788	Open in IMG/M
3300031779\|Ga0318566_10481188	Not Available	609	Open in IMG/M
3300031793\|Ga0318548_10209378	Not Available	957	Open in IMG/M
3300031819\|Ga0318568_10008876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5118	Open in IMG/M
3300031819\|Ga0318568_10745702	Not Available	608	Open in IMG/M
3300031833\|Ga0310917_10407697	Not Available	924	Open in IMG/M
3300031833\|Ga0310917_10453796	Not Available	872	Open in IMG/M
3300031845\|Ga0318511_10304277	Not Available	721	Open in IMG/M
3300031879\|Ga0306919_10210447	Not Available	1449	Open in IMG/M
3300031879\|Ga0306919_11419411	Not Available	524	Open in IMG/M
3300031890\|Ga0306925_10242375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	1943	Open in IMG/M
3300031890\|Ga0306925_10355209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1574	Open in IMG/M
3300031890\|Ga0306925_10609212	Not Available	1152	Open in IMG/M
3300031890\|Ga0306925_10680198	Not Available	1079	Open in IMG/M
3300031890\|Ga0306925_12117260	Not Available	526	Open in IMG/M
3300031897\|Ga0318520_10261710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	1035	Open in IMG/M
3300031910\|Ga0306923_10550110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	1301	Open in IMG/M
3300031912\|Ga0306921_10171392	Not Available	2542	Open in IMG/M
3300031912\|Ga0306921_10205680	Not Available	2306	Open in IMG/M
3300031941\|Ga0310912_10692670	Not Available	790	Open in IMG/M
3300031942\|Ga0310916_10521014	Not Available	1012	Open in IMG/M
3300031945\|Ga0310913_10355660	Not Available	1037	Open in IMG/M
3300031946\|Ga0310910_10565403	Not Available	902	Open in IMG/M
3300031954\|Ga0306926_10011516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9813	Open in IMG/M
3300031954\|Ga0306926_10571312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	1383	Open in IMG/M
3300031954\|Ga0306926_11253452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	868	Open in IMG/M
3300031981\|Ga0318531_10462823	Not Available	574	Open in IMG/M
3300032001\|Ga0306922_10038424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4908	Open in IMG/M
3300032001\|Ga0306922_10311653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1690	Open in IMG/M
3300032001\|Ga0306922_10313381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1684	Open in IMG/M
3300032008\|Ga0318562_10745364	Not Available	562	Open in IMG/M
3300032035\|Ga0310911_10618127	Not Available	628	Open in IMG/M
3300032039\|Ga0318559_10096751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1303	Open in IMG/M
3300032039\|Ga0318559_10295921	Not Available	751	Open in IMG/M
3300032055\|Ga0318575_10019994	All Organisms → cellular organisms → Bacteria → Proteobacteria	2789	Open in IMG/M
3300032064\|Ga0318510_10214603	Not Available	782	Open in IMG/M
3300032076\|Ga0306924_11318872	Not Available	774	Open in IMG/M
3300032089\|Ga0318525_10177198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 64-17	1095	Open in IMG/M
3300032090\|Ga0318518_10077328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1631	Open in IMG/M
3300032090\|Ga0318518_10231598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300032091\|Ga0318577_10014493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3174	Open in IMG/M
3300032261\|Ga0306920_103858097	Not Available	547	Open in IMG/M
3300033289\|Ga0310914_10479762	Not Available	1125	Open in IMG/M
3300033290\|Ga0318519_10701629	Not Available	619	Open in IMG/M
3300033290\|Ga0318519_10798793	Not Available	580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.15%
Host-Associated	Host-Associated	1.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.22%
Plants	Host-Associated → Plants	1.85%
Aquatic	Environmental → Aquatic	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.85%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.89%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	74.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_111921172	3300000953	Soil	MQVKDGYCGRLDIDQDIGEAVMLATVLIAANMCLQGGELVDISRYVDPAASFLGLKVTLEHATGTLVVYSPGYEEQRARFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESGD*
JGI10216J12902_1034123841	3300000956	Soil	RHCDHLNIASTKPGTVMLSAILVAANMCLQGGEQIDVSRYVGSSANWLELKATLQPATGMLVVYSPGYEEQQAQFTDPRSSALIPFAEPILCVKAIGGPFEFNIEVTPVDGVE*
F14TB_1049396581	3300001431	Soil	MQVKDGYCGRLDIDQDIREAVMLATVLIXXXXXXXXXXLVDISRYVDPAASFLGLKVTLEHATGTLVVYSPGYEEQRARFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESGD*
Ga0066395_106170101	3300004633	Tropical Forest Soil	MLGTVLIAANMCLQGGERVDISRYVDPGASFLELKVTVERTTGTLVVYSPGYEEQQARFTDPESSALIPFAEPILCVKAIGGPFEFKIEVMPFDNPHADAHGEAARYFAHR*
Ga0066388_1002273482	3300005332	Tropical Forest Soil	MLATVLIAANMCLQGGELVDVSRYVDPTASFLELKVTLEHATGTLVVYSPGHEEQRARFTDPESSALIPFAEPVLCVAATGGPFEFKIEVMSVESAD*
Ga0066388_1024962732	3300005332	Tropical Forest Soil	MLATVLIAANMCLQGGERIDISRYVDPTANLLELKVTMERTTGTLVVYSPGYEEQQARFSDPESSALIPFSEPVLCVAAIGGPFEFNIEVMPLDNAD*
Ga0066388_1030613021	3300005332	Tropical Forest Soil	GEMVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQRALFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAD*
Ga0070698_1016235412	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GELVDVSRYVDPAASFLELKVTLEHATGTLVIYSPGYEEQRARFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVTPVESAD*
Ga0066903_1004871536	3300005764	Tropical Forest Soil	MRGSHELVDVSRSVDPAASFLELKVTLERTTGTLVVYLPGYEEQQARSSDSESSALIPSAEPILCVAAIGGPFEFKIEVMPVESAD*
Ga0066903_1010523181	3300005764	Tropical Forest Soil	MLGTVLIAANMCLQGGERVDISRYVDPGASFLELKVTVERTTGTLVVYSPGYEEQQARFTDPESSALIPFAEPILCVKAIGGPFEFKIEVMPFDN
Ga0111539_117578252	3300009094	Populus Rhizosphere	MCLQGGEQIDVSRYVGSSANWLELKVTLQPATGMLVIYSPGYEEQQAQFTDPRSSALIPFAEPILCVKAVGGPFEFDI
Ga0075418_122356042	3300009100	Populus Rhizosphere	AIAAGMCLQGGEQVDVSRYVVPTASALELKVTLTTASGTLLIYSPGYENQQARFTSQESLGWVPIAELILRVKAIGGPFEFNIEVIPVEGID*
Ga0126373_109591331	3300010048	Tropical Forest Soil	MLGTVLIAANMCLQGGERVDISRYVDPGASFLELKVTVERTTGTLVVYSPGYEEQQARFTDPESSALIPFAEPILCVKAIGGPFEFKIEVMPLGNAD*
Ga0126370_107705252	3300010358	Tropical Forest Soil	LTKTYARQSLLATVLIAANMCMQGGELVDVSRYVDPAASFLELKVTLEHATGTLMVYSPGYEQQRARFTDPESSALIPFAEPILCVAATGGPFEFKIEVMSVESVD*
Ga0126372_130589542	3300010360	Tropical Forest Soil	MVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQRALFTDPESSALIPFAEPILCVKAIGGPFEFKIEVMPVESAD*
Ga0126378_119981402	3300010361	Tropical Forest Soil	FGDAKFLHFKSGYSGILDIYQDIRQAVMLATVLIAANMCMQGGELVDVSRYVDPAASFLELKVTVERTTGTLVVYSPGYEEQQARFTDPESSALIPFAEPILCVKAIGGPFEFKIEVMPFDNPY*
Ga0126379_119761262	3300010366	Tropical Forest Soil	FWSPRATVLIAANMCLQGGERIDISRYVDPTASLLELKVSMERTTGTLVVYSPGYEEQHARFSDPESSALIPFSEPVLCVAAIGGPFEFNIEVMPLDNAD*
Ga0126381_1009045022	3300010376	Tropical Forest Soil	MLDTVLIAANMCLQGGERVDISRYVDPGASFLELKVTVERTTGTLVVYSPGYEEQQARFTDPESSALIPFAEPILCVKAIGGPFEFKIEVMPFDNPY*
Ga0126381_1043360972	3300010376	Tropical Forest Soil	MQGGELVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQRALFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAD*
Ga0126383_126727301	3300010398	Tropical Forest Soil	GGERVDISRYVDPGASFLELKVTVERTTGTLVVYSPGYEEQQARFTDPESSALIPFAEPILCVKAIGGPFEFKIEVMPFDNPD*
Ga0137362_108789202	3300012205	Vadose Zone Soil	MQVKDGYSARLDIDQDIGEAVMLATVLIAANMCLQGGELVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQRARFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAD*
Ga0137379_108836351	3300012209	Vadose Zone Soil	MQVKDGYSARLDIDQDIGEAVMLATVLIAANMCLQGGELVDVSRYVDPAASFLELKLTLEHATGTLVVYSPGYEEQRARFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESGD*
Ga0137359_100666083	3300012923	Vadose Zone Soil	MQVKDGYSGRLDIDHDMREAVMLATVLIAANMCLQGGELVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQRARFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAD*
Ga0126369_100625204	3300012971	Tropical Forest Soil	MLGTVLSAANMCLQGGERVDISRYVDPGASFLELKVTVERTTGTLVVYSPGYEEQQARFTDPESSALIPFAEPILCVKAIGGPFEFKIEVMPFDNPHADAHGEAARYFAHR*
Ga0182036_101403542	3300016270	Soil	MLATVLIAANMCLQGGEPVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAATGGPFEFKIEVMPVESAD
Ga0182036_111261072	3300016270	Soil	MQVKDGYCGRLDIDQEIGEAVMLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIQVMPVVSAE
Ga0182041_111602511	3300016294	Soil	MLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIQVMPVVSAE
Ga0182041_113260051	3300016294	Soil	FTNLNIASTKGVAVMLSAILVAVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0182041_115848961	3300016294	Soil	MQVKDSYSGRLDIDQDIGEAVKLATVLIAANMCLQGGEPVDVSRYVDPAASFLELRVTLEHATGTLVVYSPGYEEQRVRFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESVD
Ga0182033_100706194	3300016319	Soil	MQVKDGYSGRLDIDQDIREAVMLATVLLLAANMCLQGGERVDISRYVDSAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESAE
Ga0182034_100212595	3300016371	Soil	MLATVLIAANMCLQGVEPVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFFDPESSALIPFSEPVLCVAAIGDPFEFKIEVMPLDNAD
Ga0182034_104673681	3300016371	Soil	MQVKDGYSGRLDIDQDIREAVMLATVLLLAANMCLQGGERLDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFRDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESAE
Ga0182040_101867364	3300016387	Soil	MLATVLLLAANMCLQGGERVDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAALGGPFEFKIEVMPVESAE
Ga0182040_104991672	3300016387	Soil	MQVKDGYCGRLDIDQEIGEAVMLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLMVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIQLMPVVSAE
Ga0182037_108156291	3300016404	Soil	MLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAD
Ga0182037_116066682	3300016404	Soil	MLATVLIAANMCLQGGEPVDVSRYVDLAASFLELKVTLEHATGTLVVYSPGYEEQRARFTDPESSALIPFAEPILCVAAIGGPFEFKIEVMPVESAD
Ga0182039_122296381	3300016422	Soil	PFWSPRHCLKHTRAAMLATVLVAANMCLQGGERVDLSRYVDSPAGFLKLKVTLERTAGTLVVYSPGYAEQQTRFTDPESSALIPFTEPVLCVEALGGPFEFKIEVTPVEPPD
Ga0182038_104803111	3300016445	Soil	MLATVLLLAANMCLQGGERVDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFRDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESAE
Ga0066662_101718212	3300018468	Grasslands Soil	MLATVLIAANMCLQGGELVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQRARFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAD
Ga0126371_100526385	3300021560	Tropical Forest Soil	MLGTVLIAANMCLQGGERVDISRYVDPGASFLELKVTVERTTGTLVVYSPGYEEQQARFTDPESSALIPFAEPILCVKAIGGPFEFKIEVMPFDNPY
Ga0209465_102366512	3300027874	Tropical Forest Soil	MLGTVLIAANMCLQGGERVDISRYVDPGASFLELKVTVERTTGTLVVYSPGYEEQQARFTDPESSALIPFAEPILCVKAIGGPFEFKIEVMPFDNPHADAHGEAARYFAHR
Ga0209067_106376651	3300027898	Watersheds	MLATILIAVNMCLQGGEQVDISRYVDPAANRLELKVTMEPATGTLVVYSPGYEDRPARMSGAESVAWIPFAQPVLCLKAIGGPF
Ga0318516_100372584	3300031543	Soil	MLATVLIAANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSDPESSALMPFSEPVLCVAAIGGPFEFKIEVMPVESVD
Ga0318516_101648092	3300031543	Soil	MVATVLIAANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSNPESSALIPFSEPVLCVAAIGGPLEFKRAVGRAITA
Ga0318516_101670191	3300031543	Soil	MLATVLIAANMCLQGGERIDISRYVDPTASLLELKVTMERTTGTLVVYSPGYEEQQARFSDPESSALIPFSEPVLCVAAIGGPFEFNIEVMPLDNAD
Ga0318534_105408302	3300031544	Soil	QDFLAVLQQNLMQVKDRHFTNLNIASTKGVAVMLSAILVAVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0318541_100433891	3300031545	Soil	AMLATVLIAANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSDPESSALMPFSEPVLCVAAIGGPFEFKIEVMPVESVD
Ga0318538_100307344	3300031546	Soil	MVATVLIAANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSNPEPSALIPFSEPVLCVAAIGGPLEFKRAVGRAITA
Ga0318573_102830022	3300031564	Soil	MLATVLIAANMCLQGGEPVDVSRYVDPVARFVELKVTLEHATGTLVVYSPGYEEQRARFTDPESSALIPFAEPILCVAATGGPFEFNIEVIAGRICGLMPCEFAR
Ga0310915_101184931	3300031573	Soil	MLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLMVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIQVMPVVSAE
Ga0310915_104765112	3300031573	Soil	VKDRHFTNLNIASTKGVAVMLSAILVAVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0318555_107414691	3300031640	Soil	VMLATVLIAANMCLQGGEPVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEAQRARFTDPESSALIPVAEPILCVAAIGGPFEFKIEVMPVESAD
Ga0318542_101384702	3300031668	Soil	MLATVLIAANMCLQGGEPVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEAQRARFTDPESSALIPVAEPILCVAAIGGPFEFKIEVMPVESAD
Ga0318542_103811852	3300031668	Soil	MLATVLLLAANMCLQGGEGVDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAE
Ga0318496_106654211	3300031713	Soil	LMQVKDGYSGRLDIDQDRREAVMLATVLIAANMCLQGGEPVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEAQRARFTDPESSALIPVAEPILCVAAIGGPFEFKIEVMPVE
Ga0306917_102725042	3300031719	Soil	MQVKDGYSGRLDIDHDMREAVMLATVLIAANMCLQGGEPVDVTRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFTNAASSLLWQIAGPKASKGAGRS
Ga0318500_100595243	3300031724	Soil	MVATVLIAANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSNPESSALIPFSEPVLCVAAIGGPLEFKRAVCRATTA
Ga0306918_101098492	3300031744	Soil	MLATVLIAANMCLQGGEPVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQRARFTDPESSALIPFAEPILCVAATGGPFEFKIEVMPVESAD
Ga0318535_100556174	3300031764	Soil	MVATVLIAANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSNPESSALIPFSEPVLCVAAIGGPLEFKRAVGRAIT
Ga0318521_101940172	3300031770	Soil	MQVKDRHFTNLNIASTKGVAVMLSAILVAVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0318546_105803851	3300031771	Soil	MQVKDGYSGRLDIDQDRREAVMLATVLIAANMCLQGGEPVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEAQRARFTDPESSALIPVAEPILCVAAIGGPFEFKIEVMPVESAD
Ga0318566_104811881	3300031779	Soil	MLATVLIAANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSNPESSALIPFSEPVLCVAAIGGPLEFKRAVGRAITA
Ga0318548_102093781	3300031793	Soil	NMCLQGGERIDISRYVDPTASLLELKVTMERTTGTLVVYSPGYEEQQARFSDPESSALIPFSEPVLCVAAIGGPFEFNIEVMPLDNAD
Ga0318568_100088768	3300031819	Soil	MLATVLIAANMCLQGGERIDISRYVDPTASLLELKVTMERTTGTLVVYSPGYEEQQARFSDPESSALIPFSEPVLCVAAIGGPFEFNTEVMPLDNAD
Ga0318568_107457021	3300031819	Soil	IASTKGVAVMLSAILVAVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0310917_104076972	3300031833	Soil	VRPRVKRAQDFLAVLQQNLMQVKDRHFTNLNIASTKGVAVMLSAILVAVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0310917_104537962	3300031833	Soil	MLATVLLLAANMCLQGGEGVDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFRDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAD
Ga0318511_103042771	3300031845	Soil	VLQQNLMQVKDRHFTNLNIASTKGVAVMLSAILVAVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0306919_102104471	3300031879	Soil	VPARRREQVDISRYVDPAASFLELKVTLERATGTLMVYSPGYEEQQARFSDPESTALIPFAEPVLCVAAIGGPFEFKIQVMPVVSAE
Ga0306919_114194112	3300031879	Soil	MQVKDGYSGRLDIDQDIREAVMLATVLLLAANMCLQGGERVDISRYVDSAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPV
Ga0306925_102423753	3300031890	Soil	MLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLMVYSPGYEEQQARFSDPESTALIPFAEPVLCVAAIGGPFEFKIQVMPVVSAE
Ga0306925_103552092	3300031890	Soil	MQVKDGYSGRLDIDQDIGEAVKLATVLIAANMCLQGGEPVDVSRYVDPAASFLELRVTLEHATGTLVVYSPGYEEQRVRFTDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESVD
Ga0306925_106092123	3300031890	Soil	MLATVLLLAANMCLQGGERVDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAD
Ga0306925_106801982	3300031890	Soil	MLATVLVAANMCLQGGERVDLSRYVDSPAGFLKLKVTLERTAGTLVVYSPGYAEQQTRFTDPESSALIPFTEPVLCVEALGGPFEFKIEVTPVEPPD
Ga0306925_121172601	3300031890	Soil	AVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0318520_102617102	3300031897	Soil	CLQGGERLDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESAE
Ga0306923_105501101	3300031910	Soil	MLATVLLLAANMCLQGGERVDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESAE
Ga0306921_101713922	3300031912	Soil	VDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0306921_102056802	3300031912	Soil	MQVKDGYCGRLDIDQEIGEAVMLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLMVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIQVMPVVSAE
Ga0310912_106926701	3300031941	Soil	YCGRLDIDQEIGEAVMLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLMVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIQLMPVVSAE
Ga0310916_105210142	3300031942	Soil	MQVKDGYSGRLDIDQDIREAVMLATVLLLAANMCLQGGERVDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESAE
Ga0310913_103556602	3300031945	Soil	MLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLMVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIQLMPVVSAE
Ga0310913_106709792	3300031945	Soil	MQVKDGYSGRLDIDQDIREAVMLATVLLLAANMCLQGGERLDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFTNAASSLLWQIAGPKASKGAGRS
Ga0310910_105654032	3300031946	Soil	MQVKDGYCGRLDIDQEIGEAVMLATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIQLMPVVSAE
Ga0310909_105809633	3300031947	Soil	MQVKDGYSGRLDIDQDIREAVMLATVLLLAANMCLQGGERLDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEF
Ga0306926_100115166	3300031954	Soil	MLSAILVAVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0306926_105713122	3300031954	Soil	MLATVLLLAANMCLQGGERLDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESAE
Ga0306926_112534522	3300031954	Soil	MLARVLIAANMCLQGGEQVDVSRYVDPTASWLELKVTLQPASGTLVVYSPGYEEHPARFSDPVSSVLIPFAEPILCVKAIGGPFEFDIKVMPIEGAE
Ga0318531_104628231	3300031981	Soil	MLATVLIAANMCLQGGEPVDVSRYVDPATSFLELKVTLEDATGTLVVYSPGYEAQRARFTDPESSALIPVAEPILCVAAIGGPFEFKIEVMPVESAD
Ga0306922_100384242	3300032001	Soil	MLTAILVAVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0306922_103116532	3300032001	Soil	MLATVLLLAANMCLQGGERLDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMPVESAD
Ga0306922_103133811	3300032001	Soil	AANMCLQGGEPVDVSRYVDPAASFLELKVTLEHATGTLVVYSPGYEAQRARFTDPESSALIPVAEPILCVAAIGGPFEFKIEVMPVESAD
Ga0306922_122173012	3300032001	Soil	MQVKDGYSGRLDIDHDMREAVMPATVLIAANMCLQGGEPVDVTRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFTNAASSLLWQIAGPKASKGAGRS
Ga0318562_107453642	3300032008	Soil	ANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSDPESSALMPFSEPVLCVAAIGGPFEFKIEVMPVESVD
Ga0310911_106181271	3300032035	Soil	TILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIQLMPVVSAE
Ga0318559_100967512	3300032039	Soil	MVATVLIAAKMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSNPESSALIPFSEPVLCVAAIGGPLEFKRAVGRAITA
Ga0318559_102959212	3300032039	Soil	MLATVLIAANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSDPESSALIPFSEPVLCVAAIGGPF
Ga0318575_100199944	3300032055	Soil	MVATVLIAANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSDPESSALMPFSEPVLCVAAIGGPFEFKIEVMPVESVD
Ga0318510_102146031	3300032064	Soil	KLMQVKDGYSGRLDIDQDIREAVMLATVLLLAANMCLQGGERLDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESA
Ga0306924_113188722	3300032076	Soil	ATILVAANMCLQGGEQVDISRYVDPAASFLELKVTLERATGTLMVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIQVMPVVSAE
Ga0318525_101771981	3300032089	Soil	MLATVLIAANLCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSDPESSALMPFSEPVLCVAAIGGPFEFKIEVMPVESVD
Ga0318518_100773281	3300032090	Soil	TVLIAANMCLQGGERIDISRYVDPTASLLELKVTMERTTGTLVVYSPGYEEQQARFSDPESSALIPFSEPVLCVAAIGGPFEFNIEVMPLDNAD
Ga0318518_102315982	3300032090	Soil	MVATVLIAANMCLQGGERIDISRYVDPTASLLELKVTLERTTGTLVVYSPGYEEQQARFSNTEPSALIPFSEPVLCVAAIGGPLEFKRAVGRAITA
Ga0318577_100144931	3300032091	Soil	GERIDISRYVDPTASLLELKVTMERTTGTLVVYSPGYEEQQARFSDPESSALIPFSEPVLCVAAIGGPFEFNIEVMPLDNAD
Ga0306920_1038580971	3300032261	Soil	MQVKDGYSDRLDIDRDRREAVMLATVLIAANMCLQGGEPVDVSRYVDPATSFLELKVTLEDATGTLVVYSPGYEEQRARFTDPESSALIPFAEPILCVAATGGPFEFKIEVMPVESAD
Ga0310914_104797622	3300033289	Soil	LQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0318519_107016292	3300033290	Soil	TKGVAVMLSAILVAVNMCLQGGEQVDVSRFVDPSASWLELKVTLKPATGMLVVYFPGYEEQQAQFTDPESSALIPFAEPILCLKAIGGPFEFDIEVMPVEAGE
Ga0318519_107987931	3300033290	Soil	MQVKDGYSGRLDIDQDIREAVMLATVLLLAANMCLQGGERLDISRYVDPAASFLELKVTLEHATGTLVVYSPGYEEQQARFSDPESSALIPFAEPVLCVAAIGGPFEFKIEVMSVESAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F091017

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences