Metagenome Family F091010

Overview

Basic Information

• Family ID: F091010
• Family Type: Metagenome
• Number of Sequences: 108
• Average Sequence Length: 57 residues
• Representative Sequence: MSRTNLKTATLEELEDECMELMGTPYGHNMIGIICRTVSDRFGKEDADRLFNTYQI
• Number of Associated Samples: 58
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 67.59 %
• % of genes near scaffold ends (potentially truncated): 12.04 %
• % of genes from short scaffolds (< 2000 bps): 83.33 %
• Associated GOLD sequencing projects: 49
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (52.778 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (62.963 % of family members)
• Environment Ontology (ENVO): Unclassified (88.889 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (95.370 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 45.24%
  β-sheet: 0.00%
  Coil/Unstructured: 54.76%

Predicted 3D Structure

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.118.1.17: BC3264-like	d2b6ca1	2b6c	0.68402
a.118.1.0: automated matches	d3jxya1	3jxy	0.65826
a.118.17.2: Exocyst complex component	d2b1ea_	2b1e	0.6552
a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains	d4cr2r1	4cr2	0.64717
a.47.3.1: Cag-Z	d1s2xa1	1s2x	0.64549

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02195	ParBc	11.11
PF02381	MraZ	3.70
PF03237	Terminase_6N	1.85
PF14090	HTH_39	0.93
PF03796	DnaB_C	0.93
PF01381	HTH_3	0.93
PF12957	DUF3846	0.93
PF04404	ERF	0.93
PF13455	MUG113	0.93
PF11839	Alanine_zipper	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2001	MraZ, DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activity	Translation, ribosomal structure and biogenesis [J]	3.70
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.93
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
All Organisms	root	All Organisms	47.22 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Viruses	superkingdom	All Organisms → Viruses	43.52 %
cellular organisms	root	All Organisms → cellular organisms	3.70 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	18.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	18.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.93 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	18.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.93 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.00 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	18.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.78 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.93 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000115|DelMOSum2011_c10164606	Not Available	645
3300001450|JGI24006J15134_10002266	Not Available	10725
3300001450|JGI24006J15134_10017098	All Organisms → Viruses → Predicted Viral	3403
3300002514|JGI25133J35611_10027608	All Organisms → Viruses → Predicted Viral	2156
3300006736|Ga0098033_1102232	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	814
3300006736|Ga0098033_1191429	Not Available	567
3300006738|Ga0098035_1295842	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	528
3300006750|Ga0098058_1076510	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	920
3300006751|Ga0098040_1212033	Not Available	565
3300006751|Ga0098040_1237966	Not Available	528
3300006752|Ga0098048_1174881	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	637
3300006752|Ga0098048_1206211	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	579
3300006752|Ga0098048_1245548	Not Available	523
3300006753|Ga0098039_1156124	Not Available	779
3300006753|Ga0098039_1165303	Not Available	754
3300006753|Ga0098039_1168215	Not Available	747
3300006753|Ga0098039_1256363	Not Available	588
3300006753|Ga0098039_1303514	Not Available	533
3300006754|Ga0098044_1020446	All Organisms → cellular organisms → Bacteria	2980
3300006754|Ga0098044_1032446	All Organisms → Viruses → Predicted Viral	2289
3300006754|Ga0098044_1081312	All Organisms → Viruses → Predicted Viral	1342
3300006754|Ga0098044_1099396	All Organisms → Viruses → Predicted Viral	1193
3300006754|Ga0098044_1206175	Not Available	772
3300006754|Ga0098044_1217623	Not Available	747
3300006754|Ga0098044_1227558	Not Available	727
3300006754|Ga0098044_1272502	Not Available	652
3300006754|Ga0098044_1329031	Not Available	581
3300006754|Ga0098044_1346429	Not Available	564
3300006754|Ga0098044_1374023	Not Available	538
3300006789|Ga0098054_1212787	Not Available	703
3300006789|Ga0098054_1342660	Not Available	531
3300006793|Ga0098055_1218728	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	721
3300006924|Ga0098051_1169386	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	574
3300006926|Ga0098057_1154848	Not Available	559
3300006926|Ga0098057_1168907	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	534
3300006928|Ga0098041_1003952	Not Available	5229
3300006928|Ga0098041_1025502	All Organisms → cellular organisms → Bacteria	1929
3300006928|Ga0098041_1086048	All Organisms → Viruses → Predicted Viral	1015
3300006928|Ga0098041_1102115	All Organisms → cellular organisms → Bacteria	926
3300006928|Ga0098041_1274348	Not Available	537
3300006929|Ga0098036_1188136	Not Available	628
3300007513|Ga0105019_1000650	Not Available	60018
3300008050|Ga0098052_1052302	All Organisms → Viruses → Predicted Viral	1757
3300008050|Ga0098052_1152496	Not Available	915
3300008217|Ga0114899_1030166	All Organisms → Viruses → Predicted Viral	2030
3300008219|Ga0114905_1172015	Not Available	711
3300008624|Ga0115652_1035624	Not Available	1838
3300009418|Ga0114908_1187869	Not Available	647
3300009426|Ga0115547_1216158	Not Available	602
3300009433|Ga0115545_1149053	Not Available	818
3300009433|Ga0115545_1195576	Not Available	691
3300009481|Ga0114932_10069796	All Organisms → Viruses → Predicted Viral	2220
3300009604|Ga0114901_1062270	All Organisms → Viruses → Predicted Viral	1254
3300009703|Ga0114933_10823582	Not Available	591
3300009703|Ga0114933_10870097	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	573
3300009790|Ga0115012_11317973	Not Available	612
3300010149|Ga0098049_1126133	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	795
3300010149|Ga0098049_1243650	Not Available	547
3300010150|Ga0098056_1224719	Not Available	625
3300010151|Ga0098061_1077363	All Organisms → Viruses → Predicted Viral	1260
3300010151|Ga0098061_1087583	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1169
3300010151|Ga0098061_1138793	Not Available	887
3300010151|Ga0098061_1177613	Not Available	762
3300010151|Ga0098061_1287965	Not Available	566
3300010155|Ga0098047_10072345	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1351
3300010155|Ga0098047_10084232	All Organisms → Viruses → Predicted Viral	1243
3300010155|Ga0098047_10112250	Not Available	1061
3300010155|Ga0098047_10329832	Not Available	574
3300012920|Ga0160423_10172389	All Organisms → Viruses → Predicted Viral	1513
3300012950|Ga0163108_10969887	Not Available	549
3300012952|Ga0163180_10007989	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	5859
3300012953|Ga0163179_10073007	All Organisms → Viruses → Predicted Viral	2417
3300012953|Ga0163179_10142296	All Organisms → Viruses → Predicted Viral	1784
3300012953|Ga0163179_10348210	All Organisms → Viruses → Predicted Viral	1187
3300017720|Ga0181383_1048824	All Organisms → Viruses → Predicted Viral	1136
3300017720|Ga0181383_1093220	Not Available	808
3300017730|Ga0181417_1038685	Not Available	1171
3300017750|Ga0181405_1000315	Not Available	17069
3300017762|Ga0181422_1036799	All Organisms → Viruses → Predicted Viral	1590
3300017768|Ga0187220_1046065	Not Available	1312
3300017772|Ga0181430_1154876	Not Available	665
3300017772|Ga0181430_1215950	Not Available	545
3300017775|Ga0181432_1020168	All Organisms → Viruses → Predicted Viral	1717
3300017775|Ga0181432_1033281	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1390
3300017775|Ga0181432_1051203	Not Available	1157
3300017775|Ga0181432_1144465	Not Available	729
3300017775|Ga0181432_1155811	Not Available	704
3300017775|Ga0181432_1180460	Not Available	658
3300020421|Ga0211653_10321375	Not Available	670
3300020471|Ga0211614_10095133	All Organisms → Viruses → Predicted Viral	1261
3300024344|Ga0209992_10042291	All Organisms → Viruses → Predicted Viral	2228
3300025097|Ga0208010_1087175	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	653
3300025109|Ga0208553_1024461	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1583
3300025110|Ga0208158_1022479	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1644
3300025110|Ga0208158_1047919	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1056
3300025112|Ga0209349_1010478	All Organisms → Viruses → Predicted Viral	3614
3300025112|Ga0209349_1194548	Not Available	520
3300025128|Ga0208919_1027790	All Organisms → Viruses → Predicted Viral	2067
3300025128|Ga0208919_1158819	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	697
3300025133|Ga0208299_1103514	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	958
3300025133|Ga0208299_1133568	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	798
3300025141|Ga0209756_1061841	All Organisms → Viruses → Predicted Viral	1766
3300025168|Ga0209337_1003838	Not Available	10531
3300025168|Ga0209337_1135150	Not Available	1091
3300025286|Ga0208315_1013439	All Organisms → Viruses → Predicted Viral	2764
3300025632|Ga0209194_1027176	All Organisms → Viruses → Predicted Viral	1856
3300025759|Ga0208899_1034511	All Organisms → Viruses → Predicted Viral	2326
3300032047|Ga0315330_10589600	Not Available	660

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	73.15%
Strait	Environmental → Aquatic → Marine → Strait	12.96%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.70%
Volcanic	Environmental → Aquatic → Marine → Volcanic	3.70%
Coastal	Environmental → Aquatic → Marine → Coastal	2.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.85%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.93%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.93%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	71.30%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	12.96%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.78%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.93%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	62.96%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	12.96%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	4.63%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.70%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.70%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	3.70%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.85%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.85%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.93%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.93%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.93%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.93%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.93%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental
3300007513	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate b	Environmental
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental
3300008624	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 250-2.7um	Environmental
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_101646062	3300000115	Marine	MAKMNINTATLEELEDECAELIGTQYGHNMIGIICGVVEDRFGEEQAERLFNTYQI*
JGI24006J15134_1000226613	3300001450	Marine	MARMNINTATLEELEDECAELIGTQFGHNIIGIICNVVNKRFGEEEADRFFETYQM*
JGI24006J15134_1001709811	3300001450	Marine	MARMNVNTATLEELEDECAELIGTQFGHNMIGLICNVVNKRFGEEEADRFFETYQM*
JGI25133J35611_100276087	3300002514	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFGQEEADR
Ga0098033_11022323	3300006736	Marine	MRRNRTNLKTATLEELEDECMELMGTPYGHNMIGIICRTVSDRFGKEDADRLFNTYQQ*
Ga0098033_11914292	3300006736	Marine	MSKTNLKTATLEELEDECMELVGTPYGHNMIGIICGVVEDRFGKKDAERFFDTYQI*
Ga0098035_12958422	3300006738	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFGQEEADRLFEEWQM*
Ga0098058_10765102	3300006750	Marine	MRRINIKTATIEELEMECQMIMGTSYGHNMIGIICQEAEDRFGEEEAERLYNKYQS*
Ga0098040_12120331	3300006751	Marine	MSRTNLKTATLEELEDECMELVGTPYGHNMIGIICRTVSDRFGKEDADRLFNTYQI*
Ga0098040_12379662	3300006751	Marine	MSKTNLKTATLEQLEDECMELMGTPYGHNMIGIICRTVSERFGKEDADRLFNTYQI*
Ga0098048_11748811	3300006752	Marine	KQYNKQIKEIIMSKINLKTATLGQIEDECDRVYGTPYGHNMIGIMCSVVKDRFGQEEADRLFEEWQM*
Ga0098048_12062112	3300006752	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFGEEEADRLYEEWQI*
Ga0098048_12455481	3300006752	Marine	MRRSKVNIKTATLEQLEDECMELMGTPYGHNMIGIICRTVEDRFSKEDADRLFNIYQM*
Ga0098039_11561242	3300006753	Marine	MSKTNLKTATLEQLEDECMELMGTPYGHNMIGIICRTVSDRFSKEEADRLFNTYQI*
Ga0098039_11653032	3300006753	Marine	MSRISIKTATLEELENECDELMGTPYGHNMIGIICAMVEDRFSKEDAERLFNTYQI*
Ga0098039_11682152	3300006753	Marine	MRRSRTNLKTATLEELEDECAELMGTPYGHNMIGIICRAVKERFGKEDADRLFNTYQI*
Ga0098039_12563633	3300006753	Marine	MSRTNLKTATLEELEDECMELMGTPYGHNMIGIICRTVSDRFGKEDADRLFNTYQI*
Ga0098039_13035142	3300006753	Marine	MSRTNLKTATLEELEDECMELMGTPYGHNMIGIICRTVSERFSKEDADRLFNTYQI*
Ga0098044_10204463	3300006754	Marine	MRRSKVNLKTATFEQLEEECNELLGTQFGHNMIGLICQTVEDRFGKAKAEYLFDTYQI*
Ga0098044_10324467	3300006754	Marine	MRRINIKTATLDELEEECASLMGTPYGHNMIGIICGVVEDRFSKKDAERLFNFYQG*
Ga0098044_10813121	3300006754	Marine	MSKINLETATLEELDYECMRIMGTPYGHNMIGIICNVVEERFGEEEADKLFELYQG*
Ga0098044_10993965	3300006754	Marine	MRNSRTNLKTATLEELEDECLELMGTPYGHNMIGIICRTVEDRFGEEEANRLFETYQIKEYK*KNIMQMLE*
Ga0098044_12061753	3300006754	Marine	MSRLNIKTATLDELENECAELVGTQFGHNMIGIICGVVEDRFGEEEADRLFETYQG*
Ga0098044_12176234	3300006754	Marine	MSKTNLRTATLEELEDECAELVGTTYGHNMIGIICRTVSERFGKEDADRLFNTYQI*
Ga0098044_12275582	3300006754	Marine	MSRINLKTATLDELENECDELVGTPFGHNMIGIICRTVSERFGKEDADRLFNTYQI*
Ga0098044_12725022	3300006754	Marine	MSKTNLKTATLEQLEDECMELMGTPYGHNMIGIICQTVEDRFGKEDAERLFNTYQI*
Ga0098044_13290312	3300006754	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGILCSVVKDRFGEEEADRLYEEWQI*
Ga0098044_13464292	3300006754	Marine	MGSSRVDLKTATLEEMEGECARVMGTPFGHNMIGIICRAAGERFGKEEADMLFETYQK*
Ga0098044_13740232	3300006754	Marine	MARININTATIEELENECWAVMGTQFGHNIIGIICNVVKERFGKEEAERFFTTYQV*
Ga0098054_12127873	3300006789	Marine	MSRTNLKTATLEQLEDECMELMGTPFGHNMIGIICRTVEDRFGKEDAERLFNTYQI*
Ga0098054_13426603	3300006789	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFREEEADRLYKEWQI*
Ga0098055_12187283	3300006793	Marine	MRRSRTNLKTATLEQLEDECMELMGTPFGHNMIGIICRTVEDRFGKEDADRLFNTYQI*
Ga0098051_11693861	3300006924	Marine	MTMSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFGEEEADRLYEEWQI*
Ga0098057_11548482	3300006926	Marine	MSRINLKTATLEQIEEQCEEVYGTQYGHNMIGIMCSVVKDRFGEEEANRLFEEWQI*
Ga0098057_11689073	3300006926	Marine	RNSRTNLKTATLEELEDECMELMGTPYGHNMIGIICRTVSERFGKEDADRLFNTYQQ*
Ga0098041_10039525	3300006928	Marine	MARININTATIEELEDECWEVMGTQFGHNIIGLICNVVKERFGKKEAERFFRTYQV*
Ga0098041_10255027	3300006928	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNMIGIMCSVVKDRFGQEEADRLFEEWQM*
Ga0098041_10860483	3300006928	Marine	MYKINIEKATIEELEEKCEEVVGTPYGHNIIGLICNVVDERFGKEEAERFFETYQM*
Ga0098041_11021151	3300006928	Marine	LEDECAELVGTTYGHNMIGIICRTVSERFGKEDADRLFNTYQI*
Ga0098041_12743482	3300006928	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNMIGIICNVVDERFGKEEAQRLYNTYQI*
Ga0098036_11881361	3300006929	Marine	KKKRRIIMARININSATIEELENECWAVMGTQFGHNIIGIICNVVKERFGKEEAERFFTTYQV*
Ga0105019_10006505	3300007513	Marine	MRASKINLKECTYEQMEDECFEVMGTPYGHNIISCICQVAEDRFGKEKAESLFKRYQQ*
Ga0098052_10523025	3300008050	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFGEEEADRL*
Ga0098052_11524962	3300008050	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNMIGIMCSVVKDRFGQEEADRLFEEWQI*
Ga0114899_10301666	3300008217	Deep Ocean	MSRTNLKTATLEELEDECMELMGTPYGHNMIGIICRTVSERFSKEDADRLFETYQQ*
Ga0114905_11720152	3300008219	Deep Ocean	MSRINLKTATLGQIEDECDRVYGTTYGHNMIGIMCSVVKDRFGKEEADRLFETWQI*
Ga0115652_10356247	3300008624	Marine	MRRRINIKTATLDELEEECMELMGTPYGHNMIGIICNVVEDRFGKEDAERLFNFYQI*
Ga0114908_11878693	3300009418	Deep Ocean	MRRRTDLRTATLDQLEDECAELMGTPYGHNMIGIICRTVSERFGKKEADRLFETYQQ*
Ga0115547_12161581	3300009426	Pelagic Marine	MARMNINTATLEELEDECAELIGTQFGHNMIGIICGVVEDRFGEEQAERLFHTYQI*
Ga0115545_11490532	3300009433	Pelagic Marine	MARMNINTATLEELEDECAELIGTQFGHNMIGIICGVVEDRFGEEQAERLFNTYQI*
Ga0115545_11955762	3300009433	Pelagic Marine	MARMNINTATLEELENECAELIGTQFGHNMIGIICNVVDERFGEEEAERLFNTYQM*
Ga0114932_100697967	3300009481	Deep Subsurface	MARMNINTATLEELEDKCAELIGTQYGHNMIGIICGVVEDRFGEEQAERLFNTYQI*
Ga0114901_10622703	3300009604	Deep Ocean	MSKTNLKTATLEELEDECMELMGTPYGHNMIGIICRTVSERFSKEDADRLFETYQQ*
Ga0114933_108235822	3300009703	Deep Subsurface	MSKLNLKTATIEELEEQCREVIGTPFGHNIIGLICRQVKEKFGKEEADRFFNKYQV*
Ga0114933_108700971	3300009703	Deep Subsurface	IDIKTATLGQLEDECDRVYGTPYGHNIIGIICSVVKDRFGQEEADRLFEEWQV*
Ga0115012_113179732	3300009790	Marine	MSKINLKTATMDEIEDECSRVYGTPYGHNIIGIMCSVVKDRFGEEEADRLFEEWQY*
Ga0098049_11261332	3300010149	Marine	MRNSRTNLKTATLEELEDECMELVGTPYGHNMIGIMCSVVKDRFGKEEADKLYETWQI*
Ga0098049_12436502	3300010149	Marine	MSKTNLKTATLEELEDECMELVGTPYGHNMIGIICGVVEERFGKEDAERLFDTYQL*
Ga0098056_12247191	3300010150	Marine	IKEIIMSKINLKTATLGQIEDECDRVYGTPYGHNMIGIMCSVVKDRFGEEEADRLYEEWQI*
Ga0098061_10773633	3300010151	Marine	MRNSRTNLKTATLEELEDECLELMGTPYGHNMIGIICRTVEDRFGEEEANRLFETYQI*
Ga0098061_10875831	3300010151	Marine	MMSRLNIKTATLNELENECAELVGTQFGHNMIGIICGIVEDRFGEEEADRLFETYQG*
Ga0098061_11387932	3300010151	Marine	MRNRINLKTATLEELENECEEVVGTPYGHNIIGLICNTVDERFGKEEAERFFNTYQM*
Ga0098061_11776131	3300010151	Marine	VNKINLNTATLDQLEDECDELQGTQYGHNMIGLICEVVEERFSKEDAERLSNTYQI*
Ga0098061_12879653	3300010151	Marine	MKLNIQEATIEELEEKCEDVLGTPYGHNIIGLICNVVDERFGTEEADRFFETYQM*
Ga0098047_100723455	3300010155	Marine	MSRINLKTATLEQIEEQCEEVYGTQYGHNMIGIMCSVVKDRFGEEEADRLYETWQQ*
Ga0098047_100842323	3300010155	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFGEEEADRLYKEWQY*
Ga0098047_101122505	3300010155	Marine	MSKTNLKTATLEELEDECMELMGTPYGHNMIGIICRTVSDRFSKEDADRLFNTYQI*
Ga0098047_103298321	3300010155	Marine	MRLNIQEATIDELEEECENVLGTPYGHNIIGLICNVVDERFGEEEANRFFETYQI*
Ga0160423_101723893	3300012920	Surface Seawater	MKMARLNLQTATLEELENECAELMGTQFGHNMIGIICNVVDERFGKEQAERLFNFYQM*
Ga0163108_109698873	3300012950	Seawater	MRRNRTNLKTATLEELEDECMELVGTPYGHNMIGIICRTVSERFGKEDADRLFNTYQQ*
Ga0163180_100079891	3300012952	Seawater	IDDLENECIKVMGTPYGHNMIGIICNVVDERFGKEEAKRFFKTYQEV*
Ga0163179_100730073	3300012953	Seawater	MEYVRLSFKQKRRIIMSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCEVVKDRFGQEEADRLFEEWQV*
Ga0163179_101422966	3300012953	Seawater	MSKINLKTATLGQIEDECDRVYGTPYGHNMIGIMCSVVKDRFGQEEADRLFEEWQY*
Ga0163179_103482102	3300012953	Seawater	MSKINLKTATLGQIEDECDRVYGTTYGHNMIGIMCSVVKERFGKEEADRLFEEWQY*
Ga0181383_10488242	3300017720	Seawater	MSKINLKTATLGQIEDECDRVYGTTYGHNMIGIMCSVVKERFGQEEADRLFEEWQY
Ga0181383_10932201	3300017720	Seawater	MARMNINTATLEELEDECAELIGTQFGHNMIGIICGVVEDRFGEEQAERLFNTYQI
Ga0181417_10386853	3300017730	Seawater	IMRTNIKTATLEELELKCLEIQGTTFGHNMIGLICNVVEERFGKDEANRFFKTYQTGAC
Ga0181405_100031511	3300017750	Seawater	MRTNIKTATLEELELKCLEIQGTTFGHNMIGLICNVVEERFGKDEANRFFKTYQTGAC
Ga0181422_10367991	3300017762	Seawater	MARMNINTATLEELEDECAELIGTQFGHNMIGIICGVVEDRFGEEQAERL
Ga0187220_10460652	3300017768	Seawater	MARMNINTATLEELEDECAELIGTQYGHNMISIICGVVEDRFGEEQAERLFNTYQI
Ga0181430_11548762	3300017772	Seawater	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFGEEEADRLYEEWQI
Ga0181430_12159501	3300017772	Seawater	MRKNIKTATLEELELECLQVKGTQFGHNIIGLICGIVKERFGKNEADRFFKTYQN
Ga0181432_10201684	3300017775	Seawater	MSRTNLKTATLEQLEDECMELMGTPYGHNMIGIICQTVEDRFGKEDAERLFNTYQI
Ga0181432_10332812	3300017775	Seawater	MRRSRTNIKTATLEQLEDECMELMGTPYGHNMIGIICGVVEDRFGKEDAERLFDTYQQ
Ga0181432_10512032	3300017775	Seawater	MRLNIQEATIDELEEECISVLGTPYGHNIIGLICNVVDERFGEEEADRFFETYQI
Ga0181432_11444653	3300017775	Seawater	MSRISIKTATLEELEDECMELVGTTYGHNMIGIICGVVEDRFSKKDAERFFDTYQQ
Ga0181432_11558112	3300017775	Seawater	MSKTNLKTATLDQLEDECAELMGTPYGHNMIGIICSTVSNRFGEEEADRLFETYQQ
Ga0181432_11804602	3300017775	Seawater	MSKTNLKTATLEELEDECAELMGTPYGHNMIGIICRTVEDRFSKEDAERLFNTYQI
Ga0211653_103213752	3300020421	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFGEEEADRLFEEWQY
Ga0211614_100951333	3300020471	Marine	MTKINLKTATLGQLEDECDRVYGTPYGHNMIGIICSVVKDRFGQEEADRLFEEWQY
Ga0209992_100422915	3300024344	Deep Subsurface	MARMNINTATLEELEDKCAELIGTQYGHNMIGIICGVVEDRFGEEQAERLFNTYQI
Ga0208010_10871752	3300025097	Marine	MRRINIKTATIEELEMECQMIMGTSYGHNMIGIICQEAEDRFGEEEAERLYNKYQS
Ga0208553_10244612	3300025109	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFGEEEADRLYKEWQY
Ga0208158_10224795	3300025110	Marine	MARININTATIEELEDECWEVMGTQFGHNIIGLICNVVKERFGKKEAERFFRTYQV
Ga0208158_10479192	3300025110	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNMIGIMCSVVKDRFGQEEADRLFEEWQM
Ga0209349_10104787	3300025112	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNIIGIMCSVVKDRFGQEEADRLFEEWQY
Ga0209349_11945482	3300025112	Marine	RISIKTATLEELENECDELMGTPYGHNMIGIICGVVEDRFSKEDAERLFNTYQI
Ga0208919_10277905	3300025128	Marine	MRRSKVNIKTATLEQLEDECMELMGTPYGHNMIGIICRTVEDRFSKEDADRLFNIYQM
Ga0208919_11588191	3300025128	Marine	MARININSATIEELENECWAVMGTQFGHNIIGIICNVVKERFGKEEAERFFTTYQV
Ga0208299_11035143	3300025133	Marine	MRRSRTNLKTATLEQLEDECMELMGTPFGHNMIGIICRTVEDRFGKEDADRLFNTSQK
Ga0208299_11335681	3300025133	Marine	LKTATLEELEDECMEVMGTPYGHNMIGIICRAVKERFGKEDADRLFNTYQI
Ga0209756_10618412	3300025141	Marine	MSKINLKTATLGQIEDECDRVYGTPYGHNMIGIMCSVVKDRFGEEEADRLYEEWQI
Ga0209337_10038389	3300025168	Marine	MARMNINTATLEELEDECAELIGTQFGHNIIGIICNVVNKRFGEEEADRFFETYQM
Ga0209337_11351502	3300025168	Marine	MARMNINTATLEELEDECAELIGTQFGHNMIGLICNVVNKRFGEEEADRFFETYQM
Ga0208315_10134399	3300025286	Deep Ocean	MSRTNLKTATLEELEDECMELMGTPYGHNMIGIICRTVSERFSKEDADRLFETYQQ
Ga0209194_10271761	3300025632	Pelagic Marine	MARMNINTATLEELENECAELIGTQFGHNMIGIICNVVDERFGEEEAERLFNTYQM
Ga0208899_10345114	3300025759	Aqueous	MAKMNINTATLEELEDECAELIGTQYGHNMIGIICGVVEDRFGEEQAERLFNTYQI
Ga0315330_105896001	3300032047	Seawater	MSRLNIKTATLEELEDKCLELMGTPFGHNMIGIICNQVKNRFGKEEAERLYNLYQM