NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F090989

Metagenome / Metatranscriptome Family F090989

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090989
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 58 residues
Representative Sequence VGANSTVENPVPSAGTVQTVRVKNAMPNENSYWVLYGQHTEPTYLEDAGNGQQAQR
Number of Associated Samples 93
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 65.62 %
% of genes near scaffold ends (potentially truncated) 29.63 %
% of genes from short scaffolds (< 2000 bps) 22.22 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (74.074 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(29.630 % of family members)
Environment Ontology (ENVO) Unclassified
(59.259 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(95.370 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 7.14%    β-sheet: 0.00%    Coil/Unstructured: 92.86%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF06676DUF1178 4.63
PF04055Radical_SAM 4.63
PF01970TctA 1.85
PF05050Methyltransf_21 1.85
PF03721UDPG_MGDP_dh_N 0.93
PF00117GATase 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG5319Uncharacterized conserved protein, DUF1178 domainFunction unknown [S] 4.63
COG1784TctA family transporterGeneral function prediction only [R] 1.85
COG3333TctA family transporterGeneral function prediction only [R] 1.85
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.93
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.93
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.93
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.93
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.07 %
All OrganismsrootAll Organisms25.93 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000167|SI39nov09_120mDRAFT_c1091305All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41526Open in IMG/M
3300001460|JGI24003J15210_10010663All Organisms → cellular organisms → Bacteria → Proteobacteria3718Open in IMG/M
3300007345|Ga0070752_1373988Not Available531Open in IMG/M
3300007725|Ga0102951_1230769Not Available525Open in IMG/M
3300009077|Ga0115552_1033375All Organisms → Viruses → Predicted Viral2430Open in IMG/M
3300010368|Ga0129324_10415205All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41519Open in IMG/M
3300012936|Ga0163109_11106596All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41578Open in IMG/M
3300016762|Ga0182084_1322623Not Available536Open in IMG/M
3300017697|Ga0180120_10293531All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41652Open in IMG/M
3300017713|Ga0181391_1034415All Organisms → Viruses → Predicted Viral1225Open in IMG/M
3300018036|Ga0181600_10396190All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41671Open in IMG/M
3300018049|Ga0181572_10673052All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41624Open in IMG/M
3300018415|Ga0181559_10476514All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41680Open in IMG/M
3300020165|Ga0206125_10011091All Organisms → cellular organisms → Bacteria → Proteobacteria6323Open in IMG/M
3300020188|Ga0181605_10100373All Organisms → Viruses → Predicted Viral1469Open in IMG/M
3300020191|Ga0181604_10379540All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41616Open in IMG/M
3300020469|Ga0211577_10032894All Organisms → Viruses → Predicted Viral3917Open in IMG/M
3300021375|Ga0213869_10350115All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41617Open in IMG/M
3300021958|Ga0222718_10050887All Organisms → cellular organisms → Bacteria → Proteobacteria2631Open in IMG/M
3300021959|Ga0222716_10042059All Organisms → Viruses → Predicted Viral3279Open in IMG/M
3300022900|Ga0255771_1252746All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41609Open in IMG/M
3300022925|Ga0255773_10397816Not Available524Open in IMG/M
3300025120|Ga0209535_1001163All Organisms → cellular organisms → Bacteria18073Open in IMG/M
3300025590|Ga0209195_1083554All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41731Open in IMG/M
3300025676|Ga0209657_1002140All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED3711307Open in IMG/M
3300025704|Ga0209602_1070667All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED411337Open in IMG/M
3300025830|Ga0209832_1187737All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41586Open in IMG/M
3300025849|Ga0209603_1093653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED371365Open in IMG/M
3300025881|Ga0209309_10112031All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED371449Open in IMG/M
3300025881|Ga0209309_10375697All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41618Open in IMG/M
3300025897|Ga0209425_10440736All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41615Open in IMG/M
3300028418|Ga0228615_1173528All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED41542Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh29.63%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine22.22%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine10.19%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.56%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.56%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.70%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.70%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.78%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.78%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.78%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.85%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.85%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment1.85%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.93%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.93%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.93%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water0.93%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000167Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 120mEnvironmentalOpen in IMG/M
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300001353Pelagic Microbial community sample from North Sea - COGITO 998_met_09EnvironmentalOpen in IMG/M
3300001354Pelagic Microbial community sample from North Sea - COGITO 998_met_05EnvironmentalOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001748Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)EnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007725Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009476Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300012936Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaGEnvironmentalOpen in IMG/M
3300016745Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016762Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413CT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016797Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018039Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020056Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020169Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020188Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020191Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020194Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300020810Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022900Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaGEnvironmentalOpen in IMG/M
3300022923Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaGEnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300022926Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaGEnvironmentalOpen in IMG/M
3300022927Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaGEnvironmentalOpen in IMG/M
3300023081Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaGEnvironmentalOpen in IMG/M
3300023110Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaGEnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025590Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025676Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025694Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)EnvironmentalOpen in IMG/M
3300025704Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)EnvironmentalOpen in IMG/M
3300025712Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)EnvironmentalOpen in IMG/M
3300025816Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)EnvironmentalOpen in IMG/M
3300025830Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025869Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)EnvironmentalOpen in IMG/M
3300025876Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300028418Seawater microbial communities from Monterey Bay, California, United States - 16DEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SI39nov09_120mDRAFT_109130513300000167MarineVGANSTVNNLVQSAGTVQTVHVKNVMPETNSFWVLYGQHTEPTYLEDAGNGQQLQRDAALEYVKRWRVCLDI
JGI20151J14362_1008198413300001346Pelagic MarineVKSVGVNSIVENPVPSAGIVQTVLVKSVMPNENSFWVLYGQHTEPTFL
JGI20151J14362_1021156513300001346Pelagic MarineVDANSTAGNPVPSAGTVLTVLVKSVMPNENSFWVLYGQHTEPTFLEEAGDGQQ
JGI20159J14440_1001356313300001353Pelagic MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPT
JGI20155J14468_1019981213300001354Pelagic MarineVNNIVGNPVQSAGTVLTVHVKSAMPGANSFWVLYGQHTKPTYLED
JGI20158J14315_1014717523300001355Pelagic MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPTYLEDAGNGQQAQRDA
JGI24003J15210_1001066363300001460MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPTYLEDAGDGQQAQRDNGLKMV
JGI11772J19994_104197723300001748Saline Water And SedimentVKSVAVNSIVTDPAQSVLTAQTVDVKSVMPSENSFWVLYGQHTEPTYLEDAGHG
Ga0066222_111349223300004460MarineVRSVSVNSTAGDPVQSAGIVQTVLVRNVMPEANSFWVLYGQHTKPTYLEDAGNGQ*
Ga0070749_1002489353300006802AqueousVNSTVENPVPSAGTVQTVLVKNVMPETNSFWVLYGLHTKPTYLEDAGNGQQAQRDAALEYIKQWRVCLDIGSNI
Ga0070746_1007946333300006919AqueousVRDAGANSIARVHVQNVGTVQTVLVRNVMPQANSFWVLYGHHTKPTYLEDAGNG
Ga0098046_102869233300006990MarineVRNADANSTVDNLVQSAGIVLTVRVKNVMPDEDSFWVLYRHDTQPILHPEAGKDG
Ga0070752_137398823300007345AqueousVGVNSTVENPVPSAGTVQTVLVKSVMPNENSFWVLYGQHTEPTFLEEAGDGQQAQRDASLKYVK
Ga0102951_123076923300007725WaterVNSTAGVHVQNAGTVLTVLVRNVMPTDNSFCVLYAQHTEPTFLEEAGDGQKAQRDASL
Ga0099850_103367043300007960AqueousVGANSTAEVHVQNAGTVPTVRVKSVMPNENSFWVLYGQHT
Ga0115566_1027580833300009071Pelagic MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPTYLEDAGNGQQAQRDAALQYIKQWRVC
Ga0115552_103337513300009077Pelagic MarineVRSAGVNNIVGNPVQSAGTVLTVHVKSAMPGANSFWVLYGQHTKPTYLEDAGD
Ga0115552_126232523300009077Pelagic MarineVNSTVDDLVQSAGTVQTVLVKNVMPEADSFWVLHGLHTEPTYLKDAGGSQ
Ga0118687_1021425213300009124SedimentVDANSTVENPVPSAGTVQTVPVKSVMPNENSYWVYYLNHTEPTYLEQAGNGQQPQRDA
Ga0118687_1032584013300009124SedimentVAVNSTVGDHAPSAWTVQTVDVRSVVPNENSFWVLYRQHTEPTYLEDAGNGQRPQRDSALQYVKNWRVYL
Ga0115546_108736333300009435Pelagic MarineVGVNSTVDNLVQSAGTVQIVLVKSVMPNENSYWVYYLNHTEPTYLEDAGNGQQAQRDNSLKYVKRWRNALDI
Ga0115558_122518613300009449Pelagic MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLY
Ga0115555_115235013300009476Pelagic MarineVGVNSTVDNPVPSAGTVQIVLVKSVMPNENSYWVYYLNHTEPTYLEEAGNGQQAQRDNSLKYVKRWRNALDI
Ga0115568_1001971253300009498Pelagic MarineVNSTVDNLVQSAGTVQIVLVKSVMPNENSYWVYYLNHTEPTYLEDAGNGQQAQ
Ga0115572_1001454193300009507Pelagic MarineVVANSTVENPVPSAGTVQTVLVKSVMPNENSFWVYYLNHTEPTYLEEAGNGQQAQRDASL
Ga0115572_1003275663300009507Pelagic MarineVNSTAGDPVQSAGTVQTVLVRNVMPEANSFWVLYGQHTKPTYLEDAG
Ga0115567_1044723013300009508Pelagic MarineVDANSTVDNPVPSAGTVQTVLVRNVMPEANSFWVLYGQHTEPTY
Ga0129345_109410933300010297Freshwater To Marine Saline GradientVRNVAVNSTAGNHAPSAWTVRTVAVKNAMPNENSFWVLYRHHTQPTYLEDAGDGQQAQRDAALAYVK
Ga0129324_1041520513300010368Freshwater To Marine Saline GradientVAVNSTVDNLVQSAGTVQTVHVKNVMPGANSFWVLYGQHTEPTYIEDAGGGQQAQRN
Ga0163109_1110659623300012936Surface SeawaterVRNVVANSTVENLVQSAGIVQTVFVKFAMKTKKNSFWVLYARHTEPTYLEDAGNGQQEQRDWALSFVKKW
Ga0182093_181351933300016745Salt MarshVNSTVENPVQSAGTVQTVLVKSVMPNENSFWVLYGQHTEPTFLEEAGDGQQAQRDASLKYVKSWRTAIDVGANVG
Ga0182084_132262313300016762Salt MarshVRSVGVNSTVENPVPSAGTVQTVLVRNVMPNENSYWVYYLHHTEPTYLEEAGNGQQAQRDASLKYVKQWRVCLD
Ga0182090_172532913300016797Salt MarshVGVNSTVENPVPSAEIVQTVHVKSAMPNENSYWVLYGQHTEPTYLEDAGN
Ga0182090_187276053300016797Salt MarshVGANSTVENPVPSAGTVQTVRVKNAMPNENSYWVLYGQHTEPTYLEDAGNGQQAQRDASLKYVE
Ga0182090_193124313300016797Salt MarshVRSVDANSTVESLVPSAEIVQTVHVKSAMPNENSYWVLYGQHTEPTYLEDAGN
Ga0180120_1029353113300017697Freshwater To Marine Saline GradientVRNAGANSIARVHVQNVGTVQTVLVRNVMPQANSFWVLYGHHTKPTYLEDAGNGQQAQRDAALEYIKQ
Ga0181403_110571513300017710SeawaterVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPTYLEDAGDGQQAQRDNGLKMVRSWRTALD
Ga0181391_103441533300017713SeawaterVNNIVGNPVQSAGTVLTVHVKSAMPGANSFWVLYGQHTKPTYLEDAGDGQLAQRESGLKVVSSWRNAIDIGS
Ga0181373_105552513300017721MarineVGANSIVDNLVQSAGTVLTVTVKSAMANENSFWVLYGQHTKPTYLEDAGNGQQLQRD
Ga0181373_105988023300017721MarineVRNVGANSIAEVHVQNAGIVLTVRVRNVMSKANSFWVLYGQHTEPTYLEDAGNGQQAQRDAALKYVKQWRVCLV
Ga0181421_114876223300017741SeawaterVRNADVNNTVNNRVQNAGTVQIVIVRSVVPTENSFWVLYGQHTKPTYLEDAGHGQQ
Ga0181389_111244913300017746SeawaterVDANSTVDNPVQNAGTVLTVHVKSAMPGANSFWVLYGQHTKPTYLEDAGDGQLAQR
Ga0181607_1006106013300017950Salt MarshVDANSTVESLVPSAEIVQTVHVKSAMPNENSYWVLYGQHTEPTYLEDAGN
Ga0181577_1010795713300017951Salt MarshVNSTVDNPVQSAGTVQIVLVKSVMPNENSYWVYYLNHTEP
Ga0181581_1011035513300017962Salt MarshVSVVAVNSTVKNLAQNAWTVPIVTVKSVMPNENSFWVLYGQHTKPTYLEDAG
Ga0181569_1053394513300017986Salt MarshVDVNSTVEVLAQNVGTVQTVDARSVMPTENSFWVFYLHHTEPTFLEEAGNGQQAQRDNSLKY
Ga0181600_1039619013300018036Salt MarshVRSVGANSTVENPVPSAGTVQTVRVKNAMPNENSYWVLYGQHTEPTYLEDAGNGQQAQRDASLKY
Ga0181579_1053646023300018039Salt MarshVGVNSTVENPVPSAGTVQTVLVKSVMPNENSFWVLYGQHTEPTYLEDAGNGQQAQRDASLKYVEQW
Ga0181572_1067305213300018049Salt MarshVDANSTVDNPVQSAGTVQTVLVRNVMPNENSYWVYYLHHTEPTYLEEAGNGQQAQR
Ga0181559_1047651413300018415Salt MarshVNSTVDNLVPSAGTVQIVLVKSVMPNENSYWVYYLNHTEPTY
Ga0181563_1002283093300018420Salt MarshVNSTVENPVPSAEIVQTVHVKSAMPNENSYWVLYGQHTEPTYLEDAGNGQQAQRDASLKYVKQWRVCLDIGSN
Ga0181591_10020891103300018424Salt MarshVRNVAVNSTAGNPAPSAWTVLTVAVKNVMPNENSFWVLYRHHTQPTYLEDAGDGQQAQRD
Ga0181591_1009509543300018424Salt MarshVVANSIVEDPAPSVWTVRTVAVKNVMPNENSFWVLYRHHTQPTYLEDAGDGQQAQRDA
Ga0181566_1037237313300018426Salt MarshVNSTVENPVPSAGTVQTVLVRNVMPNENSYWVYYLNHTEPTYLEEAGNGQQAQRDNSLKYVKRWRNALDIGANVG
Ga0181574_1005603743300020056Salt MarshVNSTVDNLVPSAGTVQIVLVKSVMPNENSYWVYYLNHTEPTYLEEGGNGQQ
Ga0206125_1001109113300020165SeawaterVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPTYLEDAGNGQQAQRDAALQYIKQWRVCL
Ga0206127_116167623300020169SeawaterVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPTYLEDAGNGQQAQRDAAL
Ga0206124_1000227813300020175SeawaterVSANSTAGDPVQSAGTVQTVHVKSAMPGANSFWVLYGQHTKPTYLEDAGNGQQAQRDAALQYIKQWRVCL
Ga0181599_105293443300020178Salt MarshVDANSTVESLVPSAEIVQTVHVKSAMPNENSYWVLYGQHTEPTYLEDAGNGQQAQRDASLKYVRNW
Ga0181605_1010037313300020188Salt MarshVGVNSTVENPVPSAEIVQTVHVKSAMPNENSYWVLYGQHTEPTYLEDA
Ga0181604_1037954013300020191Salt MarshVGANSTVENPVPSAGTVQTVLVRNVMPNENSFWVYNRWQAEPTLTEQADTQKQQRDNGLRYVSQWRNAV
Ga0181597_1001844193300020194Salt MarshVDANSTVESLVPSAEIVQTVHVKSAMPNENSYWVLYGQHTEPTY
Ga0211521_1043984123300020428MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPTYLEDAGDGQQAQRD
Ga0211576_1038632213300020438MarineVAVNSTVDNPVQNAGTVLTVRVKNVMPDEDSFWVL
Ga0211577_1003289413300020469MarineVNSTVDNLVPSAGTVRTVHVKTVMPEANSFWVLYGQHTEPTYLEDAG
Ga0206126_1000742513300020595SeawaterVSANSTAGDPVQSAGTVQTVHVKSAMPGANSFWVLYGQHTKPTYLEDAGNGQQAQRDAALQYIKQ
Ga0181598_1003510203300020810Salt MarshVGVNSTVENPVPSAEIVQTVHVKSAMPNENSYWVLYGQHTEPTYLEDAGNGQ
Ga0213869_1035011523300021375SeawaterVNSTVDNLVQSAGTVQIVLVKSVMPNENSYWVYYLNHTEPTYLEEAGNGQQAQRDNSLKY
Ga0222718_1005088713300021958Estuarine WaterVGANSTVENPVPSAGTVQTVLVRNVMPNENSYWVLYGQHTEPTFLEEAGNGQQPQRDASLAFV
Ga0222716_1004205913300021959Estuarine WaterVGVNSTVDNPVQSAGTVQTVRVRNVMPEANSFWVLYGQHTKPTYLED
Ga0222719_1001610313300021964Estuarine WaterVNSTVENPVPSAGTVQTVLVKSVMPNENSFWVLYGQHKEPTYLEDAGNGQQAQRDASLKYVKQ
Ga0255771_125274623300022900Salt MarshVGVNSTVENPVPSAEIVQTVHVKSAMPNENSYWVLYGQHTEPTYLED
Ga0255783_1006695043300022923Salt MarshVGVNSTVENPVPSAEIVQTVHVKSAMPNENSYWVLYGQHTEPTYLEDAGNGQQAQRDASLKYVEQ
Ga0255773_1039781613300022925Salt MarshVGANSTVENPVPSAGTVQTVLVKSVMPNENSYWVLYGQHTEPTFLEEAGNGQQA
Ga0255753_122430223300022926Salt MarshVGANSTVENPAPSARTARTVTARSVVTKENSFWVLYSYHDKPTYLEEAGNGQSLQRDASLKYVKNWRTAID
Ga0255769_1003054153300022927Salt MarshVGANSTVENPVPSAGTVQTVRVKNAMPNENSYWVLYGQHTEPTYLEDAGNGQQAQR
Ga0255764_1003109353300023081Salt MarshVNSTVKDRAPNAWTVLTVAVKSVMTNENSFWVLYGQHTEPEYLVDTGHGQQPQRDAALKYVN
Ga0255743_1033926513300023110Salt MarshVNYVDVNSTVEVLAQNVGTVQTVDARSVMPTENSFWVFYLHHTEPTFLEEAGNGQ
Ga0255751_1006697313300023116Salt MarshVVANSIVEDPAPSVWTVRTVAVKNVMPNENSFWVLYRHHTQPTYLEDAGDGQQAQRDAA
Ga0255772_1024165813300023176Salt MarshVNSTVDNLVQSVGTVQIVLVKSVMPNENSYWVYYLNHTEPTYLEEAGNGQQAQ
Ga0244775_1049114713300024346EstuarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPTYLEDAGDGQQAQRDN
Ga0209535_100116313300025120MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPTYLEDAGDGQQAQRDNGLKMVRSWRTALDI
Ga0209337_121820713300025168MarineVDANSTVDNHVLSAGTVPIVRVKIVMATTNSFWVLYGQHTEPTYLEDAGNGQQAQRDNGLKHVKCWRNAIDVG
Ga0209195_108355413300025590Pelagic MarineVDANSTVDNPVQSAGTVQTVLVKNVMPETNSFWVLYGLHTKPTYLEDAGNGQQLQRDAALEYVKQWRVCLDIGSNIG
Ga0209716_1006328123300025626Pelagic MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYG
Ga0209657_1002140153300025676MarineVGANSTVNNLVQSAGTVQTVHVKNVMPETNSFWVLYGQHTEPTYLEDAG
Ga0209406_100592613300025694Pelagic MarineVSANSTAGDPVQSAGTVQTVHVKSAMPGANSFWVLYGQHTKPTYLEDAGNGQQAQRD
Ga0209602_107066713300025704Pelagic MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTKPTYLEDAGNGQQAQRDAALQYIK
Ga0209602_109782833300025704Pelagic MarineVVANSTVENPVPSAGTVQTVLVKSVMPNENSFWVYYLNHTEPTYIEEAGNGQQAQRDASL
Ga0209305_110937413300025712Pelagic MarineVDANSTVDNLVQSAGTVQTVLVKSVMPNENSFWVLYGQHTEPTFLEEAGD
Ga0209193_102299413300025816Pelagic MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQHTK
Ga0209832_118773713300025830Pelagic MarineVRSVSVNSTAGDPVQSAGTVQTVLVRNVMPEANSFWVLYGQHTKPTYLEDAGNGQQAQRDAALQYIKQWRV
Ga0209603_109365313300025849Pelagic MarineVVANSTVENPVPSAGTVQTVLVKSVMPNENSFWVYYLNHTEPTYIEEAGNGQ
Ga0209308_1002586153300025869Pelagic MarineVNSTAGDPVQSAGTVQTVLVRNVMPEANSFWVLYGQHTKPTYLEDAGNGQQAQRDAALQYIKQWRVC
Ga0209308_1016658233300025869Pelagic MarineVRSVSVNSTAGDPVQSAGTVQTVLVRNVMLEANSFWVLYGQHTKPTYLEDAGNGQQAQRDAALQYIKQWRVC
Ga0209223_1009093313300025876Pelagic MarineVDANSTVDNPVQNAGTVPIVHVKSAMPGPNSFWVLYGQ
Ga0209309_1007250943300025881Pelagic MarineVSVNSTAGDPVQSAGTVQTVLVRNVMPEANSFWVLYGQHTKPTYLEDAGNGQQAQRDAALQYIK
Ga0209309_1011203113300025881Pelagic MarineVVANSTVENPVPSAGTVQTVLVKSVMPNENSFWVYYLNHTEPTYIEEAGNGQQAQRDASLKFVRQ
Ga0209309_1037569713300025881Pelagic MarineVDANSTVDNLVQSAGTVQTVLVKSVMPNENSFWVLYGQHTEPTFLEEAGDGQQ
Ga0209632_1002227713300025886Pelagic MarineVSANSTAGDPVQSAGTVQTVHVKSAMPGANSFWVLYGQHTKPTYLEDAGNGQQAQRDA
Ga0208644_104256633300025889AqueousVSVVAVNSTAGNHALNVWTVLTVAVKSAMPSENSFWVLYGQHTEPTYLKDAGDGQRSQREDALE
Ga0208644_107798533300025889AqueousVNSTVENPVPSAGTVQTVLVKSVMPNKNSFWVYYLNHTEPTYLEEAGNGQQ
Ga0209630_1012078713300025892Pelagic MarineVGVNSIVENPVPSAGIVQTVLVKSVMPNENSFWVLYGQHTEPTFL
Ga0209630_1018526713300025892Pelagic MarineVDVNSTVDDLVQSAGTVQTVLVKNVMPEADSFWVLHGLHTEPTYLK
Ga0209425_1003351063300025897Pelagic MarineVNSTAGDPVQSAGTVQTVLVRNVMPEANSFWVLYGQHTKPTYLEDAGNGQQAQRDA
Ga0209425_1044073613300025897Pelagic MarineVNSTVDNPVPNAGTVQTVLVRNVVPEANSFWVLYGQHTKPTYLEDAGNGQQAQRDA
Ga0209932_105760923300026183Pond WaterVGANSTVENPVPSAGTVQTVLVKSVMPNENSFWILYGQHTEPTYLEDAGNGQQAQRDASLKYVKQWRVCLDIGA
Ga0228615_117352813300028418SeawaterVNSTVGNLVQSAGTVQTVLVKNVMPEANSFWVLYGQHTKPTYLEDAG


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