NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090971

Metagenome Family F090971

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090971
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 38 residues
Representative Sequence MSYIYGAPSKARNANVVYIYMDLRLATLKQSLSICC
Number of Associated Samples 10
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 75.00 %
% of genes near scaffold ends (potentially truncated) 2.78 %
% of genes from short scaffolds (< 2000 bps) 2.78 %
Associated GOLD sequencing projects 6
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (99.074 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.
1JGI20163J15578_101821001
2JGI20163J15578_102278332
3JGI20163J15578_102690511
4JGI20163J15578_102704644
5JGI20163J15578_102937871
6JGI20163J15578_104689081
7JGI20163J15578_106326452
8JGI20163J15578_106433771
9JGI20163J15578_107176792
10JGI20163J15578_107532481
11JGI20163J15578_107779361
12JGI20163J15578_108164673
13JGI20163J15578_108601031
14JGI20165J26630_105710193
15JGI20165J26630_106473271
16JGI20164J26629_104239101
17JGI20164J26629_104474902
18JGI20166J26741_100985718
19JGI20166J26741_105029821
20JGI20166J26741_105472931
21JGI20166J26741_112586942
22JGI20166J26741_113223504
23JGI20166J26741_113555043
24JGI20166J26741_114553643
25JGI20166J26741_114685021
26JGI20166J26741_115186194
27JGI20166J26741_115194811
28JGI20166J26741_115443903
29JGI20166J26741_115955002
30JGI20166J26741_116047731
31JGI20166J26741_116063451
32JGI20166J26741_116165203
33JGI20166J26741_116343611
34JGI20166J26741_116727242
35JGI20166J26741_116761302
36JGI20166J26741_116865533
37JGI20166J26741_116966071
38JGI20166J26741_117056552
39JGI20166J26741_117477592
40JGI20166J26741_117614963
41JGI20166J26741_117685631
42JGI20166J26741_117803381
43JGI20166J26741_118337681
44JGI20166J26741_118445611
45JGI20166J26741_118547003
46JGI20166J26741_118658393
47JGI20166J26741_118747531
48JGI20166J26741_119033771
49JGI20166J26741_119283187
50JGI20166J26741_119928361
51JGI20166J26741_121339187
52JGI20166J26741_121479141
53JGI20166J26741_121593802
54JGI20166J26741_121616741
55JGI20166J26741_121842382
56JGI20166J26741_122370432
57JGI20166J26741_122540273
58JGI20166J26741_122837621
59JGI20163J26743_108426172
60JGI20163J26743_110191831
61JGI20163J26743_110596244
62JGI20163J26743_111122381
63JGI20163J26743_111391432
64JGI20163J26743_111809413
65JGI20163J26743_112343582
66JGI20163J26743_112748581
67JGI20163J26743_114478203
68JGI20163J26743_115229451
69Ga0209531_100046591
70Ga0209531_100654471
71Ga0209628_100816673
72Ga0209628_101039692
73Ga0209628_101370321
74Ga0209628_104221301
75Ga0209628_106237761
76Ga0209628_107825491
77Ga0209628_110441551
78Ga0209628_111448812
79Ga0209628_112172231
80Ga0209628_114376331
81Ga0209737_100067991
82Ga0209737_100810482
83Ga0209737_102056311
84Ga0209737_102747311
85Ga0209737_104657771
86Ga0209737_105362821
87Ga0209737_106952231
88Ga0209737_107511291
89Ga0209737_107585013
90Ga0209737_107595721
91Ga0209737_107736191
92Ga0209737_110497161
93Ga0209627_10622471
94Ga0209629_100584941
95Ga0209629_101256442
96Ga0209629_102214631
97Ga0209629_102434391
98Ga0209629_102899012
99Ga0209629_103303852
100Ga0209629_103358583
101Ga0209629_104866191
102Ga0209629_105860751
103Ga0209629_107090451
104Ga0209629_107873601
105Ga0209629_108521981
106Ga0209629_109611331
107Ga0209629_109632651
108Ga0209629_109890641
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.22%    β-sheet: 0.00%    Coil/Unstructured: 52.78%
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Variant

5101520253035MSYIYGAPSKARNANVVYIYMDLRLATLKQSLSICCSequenceα-helicesβ-strandsCoilSS Conf. score
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Gene Neighborhood

Neighboring Pfam domains




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Phylogeny

NCBI Taxonomy

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Visualization
All Organisms
Unclassified
99.1%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Visualization
Termite Gut
100.0%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20163J15578_1018210013300001544Termite GutMSYIYINIYINIYIYIYGAPSKARNANVVYIYMDLRLA
JGI20163J15578_1022783323300001544Termite GutMSYIYGAPRKARNANAVYIYIYIYMDLRLATLKQSLSICC
JGI20163J15578_1026905113300001544Termite GutMSYIYGAPSKAKNANFVYIYMDLRLATLKQSLSICCT
JGI20163J15578_1027046443300001544Termite GutMSYIYGAPSKARNANVVYLDLRLATLKQSLSICCTMFQ
JGI20163J15578_1029378713300001544Termite GutMLYIYGAPSKARNANVVYIYMDLRLARLKQSLSIC
JGI20163J15578_1046890813300001544Termite GutMSCVYIYGAPSKTRNANVVYIYMDLRLATLKQSLSI
JGI20163J15578_1063264523300001544Termite GutMSYIYGAPIKARNANVVYIYMDLRLATLKQSLSICCTMFQH
JGI20163J15578_1064337713300001544Termite GutMSYIYEAPSKARNANVVYIYMDLRLATLKQSLSIC
JGI20163J15578_1071767923300001544Termite GutMSYIYGAPSKARNANVVYMYIYIYIYMDLRLATLKQSLSICCTVFQ
JGI20163J15578_1075324813300001544Termite GutMSYIYGTPSKARNANVVYMDLRLATLKQSLSICCT
JGI20163J15578_1077793613300001544Termite GutMLYIYGAPSKARSANVVYIYMDLRLATLKQSLSICCTMF
JGI20163J15578_1081646733300001544Termite GutMHILTLRLLMSYIYMELLVKNNVVYIYMDLRLATLKQ
JGI20163J15578_1086010313300001544Termite GutMSYIYIYGPSSKARNANVVYIYMDLRLATLKQSLSIC
JGI20165J26630_1057101933300002125Termite GutMSYIIIYGAPSKARNANVIYIYMDLRLATLKQSLS
JGI20165J26630_1064732713300002125Termite GutMSYIYGTPSKARNANVVYIYIYIYMDLRLATLKQSLS
JGI20164J26629_1042391013300002127Termite GutMSYIYGAPSKARHANVVYMDLSLATLKQSLSICCTMFQH
JGI20164J26629_1044749023300002127Termite GutVGIQRELTLRLLMSYIYGAPSKARNANVVYIYMDLRLATL
JGI20166J26741_1009857183300002175Termite GutMSYIYGAPSRARNANVVYIYIYMDLRLATLKQSLSICCTMFQH
JGI20166J26741_1050298213300002175Termite GutMSYIYTYGAPSKARNANVVYIYMDLRLATLKQSLS
JGI20166J26741_1054729313300002175Termite GutMSYIYGGPSKARNANVVYIYIYIYIYMDLRLATLKQS
JGI20166J26741_1125869423300002175Termite GutMSYIYGTPSKARNANVVYMDLRLATLKQSLSICCTMFQH
JGI20166J26741_1132235043300002175Termite GutMSYIYGAPSKARNANVVYYMDLRLATLKQSLSICCT
JGI20166J26741_1135550433300002175Termite GutMSYLYGAPSKARNANVVYIYMDLRLTTLKQSLSICC
JGI20166J26741_1145536433300002175Termite GutMSYIYGAPSKARNANVVFIYMDLRLATLKQSLSICCTMFQH*INAERFPV
JGI20166J26741_1146850213300002175Termite GutMSYIYIYIYIYGAPSKARNANVIYIYMDLRLATLKQSLS
JGI20166J26741_1151861943300002175Termite GutMNMTKLTFRLLMSYIYGAPSKARNANVVYIYMDLRLATLK
JGI20166J26741_1151948113300002175Termite GutMSYIYGAPSKARNANVVYIYMDLHLATLKQSLSIC
JGI20166J26741_1154439033300002175Termite GutMSYIYIYGASSKARNANVVYIYMDLRLATLKQSLSI
JGI20166J26741_1159550023300002175Termite GutMSYIHGAPSKARNANVIYIYMDLRLATLKQSLSICCT
JGI20166J26741_1160477313300002175Termite GutMLTLRPLISYIYGAPSKARNANIVYIYIYMDLRLATLKQSLS
JGI20166J26741_1160634513300002175Termite GutMYLTLRLLMSYIYGAPSKARNANVVYIYMDLRLATLKQSLS
JGI20166J26741_1161652033300002175Termite GutMSYIYGAHSKARNANVVYIYMDLRLATLKQSLSIC
JGI20166J26741_1163436113300002175Termite GutMSYIYGAPSKARNANIGYIYMDLRLATLKQSLSICCTMFQH*
JGI20166J26741_1167272423300002175Termite GutMSLNSTLTLRILMSYIYGAPSKARNANVVYIYMDLRLATLKQS
JGI20166J26741_1167613023300002175Termite GutMSYINGAPIKARNANVVYIYMDLRLATLKQSLSICCT
JGI20166J26741_1168655333300002175Termite GutMSSIYGAPSKARNANVVYIYIYMDLRLATLKQSLSI
JGI20166J26741_1169660713300002175Termite GutMAYIYGAPSKARNANVVYIYGPSLATLKQSLSICC
JGI20166J26741_1170565523300002175Termite GutMSYIYGAPSKARNANVIYMDLRLATLKQSLSICCTMFQH
JGI20166J26741_1174775923300002175Termite GutMWYIYGAPSKARNANVVYIYMDLRLATLKQSLSIC
JGI20166J26741_1176149633300002175Termite GutMSHIYGAPSKARNANVIYIYIYMDLRLATLKQSLSICCTMFQH
JGI20166J26741_1176856313300002175Termite GutMDPVILARLTLRLLMSYIYGAPSKARIANVYIYMDLRLATLKQSLSICCTMFQH*
JGI20166J26741_1178033813300002175Termite GutMSYIYIYIYIYIYGAHSKARNANVVYIYMDLRLATLKQSLSIC
JGI20166J26741_1183376813300002175Termite GutMSYIYGAPSKARNVNVVYIYMDLRLATLKQSLSIC
JGI20166J26741_1184456113300002175Termite GutMSYIYIYGAPSKARNANVIYIYMDLRLATLKQSLS
JGI20166J26741_1185470033300002175Termite GutMSYIIIYGAPSKARNANVIYIYMDLRLATLKQSLSICC
JGI20166J26741_1186583933300002175Termite GutMSYIYIYGAPSKARNANVVYIYMDLCLATLKQSLSI
JGI20166J26741_1187475313300002175Termite GutMSYIYGAPIKARNANVVYIYIYIYIYIYMDLRLATLKQSLSI
JGI20166J26741_1190337713300002175Termite GutMSYIYIYGAPSKARNANVIYIYMDLRLATLKQSLSIC
JGI20166J26741_1192831873300002175Termite GutMSYIYGAPSKARNANIVYIYIYMDLRLATLKQSLS
JGI20166J26741_1199283613300002175Termite GutMSYIYGAPSKARNANVVYIYMDLRLAMLKQSLSIC
JGI20166J26741_1213391873300002175Termite GutMSYIYRAPSKARNANVVYMDLRLATLKQSLSICCTMFQ
JGI20166J26741_1214791413300002175Termite GutMSYICIYGAPSKARNANVVYIYMDLRLATLKQFLSICC
JGI20166J26741_1215938023300002175Termite GutMSYMCIYGAPSKARNANVVYIYMDLRLATLKQSLSIC
JGI20166J26741_1216167413300002175Termite GutMSYIYGAPSKARNANVVYIYMDLRLATLKQSLSICCTMFQH
JGI20166J26741_1218423823300002175Termite GutMPYIYIYIYGAPSKARNANVVYIYIYMDLRLATLK
JGI20166J26741_1223704323300002175Termite GutMCIYGAPSKARNADVVYIYMDLRLATLKQSLSICC
JGI20166J26741_1225402733300002175Termite GutMSYIYIYGAPSKARNANVVYIYMDLRLAKLKQSLSICCTMFQ
JGI20166J26741_1228376213300002175Termite GutMSYIYGAPSKARNANVVYTYMDLRLATLKQSLSIC
JGI20163J26743_1084261723300002185Termite GutMSNIYGAPSKARNANVVYIYMDLRLATLKQSLSIC
JGI20163J26743_1101918313300002185Termite GutMSYINGAPIKARNANVVYIYMDLRLATLKQSLSICCTM
JGI20163J26743_1105962443300002185Termite GutMSYIYIYIYGAPSKARNANVVYIDLRLATLKQSLSICC
JGI20163J26743_1111223813300002185Termite GutMSYIYGAPSKARNANVVYIYIYIYIYMDLRLATLK
JGI20163J26743_1113914323300002185Termite GutMSYIYGAPSKARNANVVYMDLSLATLKQSLSICCT
JGI20163J26743_1118094133300002185Termite GutMKKLTLRLLMSYIYGAPSKARNAYVIYMDLRLATLKQSLSICC
JGI20163J26743_1123435823300002185Termite GutMYIYGAPSKARNANVVYNMDLRLATLKQSLSICCTM
JGI20163J26743_1127485813300002185Termite GutMAYIYGAPSKARNANVVYIYGPSLATLKQSLSICCTMFQH*
JGI20163J26743_1144782033300002185Termite GutMSYIYIYIYGAPSKARNANVVYMDLRLATLKQSLSI
JGI20163J26743_1152294513300002185Termite GutMSYIYIYGAPSKARNANVIYIYMDLRLATLKQSLSICCTMFQH
Ga0209531_1000465913300027558Termite GutMSYIYVYGAPSKARNANVVYIYMDLRLATLKQSLSICC
Ga0209531_1006544713300027558Termite GutMSYIYGAPGKARNANVVYIYMDLRLATLKQSLSICCTMFQH
Ga0209628_1008166733300027891Termite GutMSYIYGAPSKARNANVVYIYMDLRLATLKQSLSIC
Ga0209628_1010396923300027891Termite GutMSYIYGVPSKVKNANVVYIYIYIYMDLSLATLKQSLSICCTM
Ga0209628_1013703213300027891Termite GutMSYIYIYVYGAPNKARNANVVYIYMDLRLATLKQSLSICC
Ga0209628_1042213013300027891Termite GutMSYIYGAPSKARNANVVYIYMDLRLATLKQSLSICC
Ga0209628_1062377613300027891Termite GutMSYIYGAPSKARNANVIYMDLRLATLKQSLSICCTM
Ga0209628_1078254913300027891Termite GutMSYIYGAPSKARNANVVYIYMDLRLATLKQSLSICCTMF
Ga0209628_1104415513300027891Termite GutMSYMCIYGAPSKARNANVVYIYMDLRLATLKQSLSICCTMFQ
Ga0209628_1114488123300027891Termite GutMSYIYGAPIKARNANVVYIYMDLRLATLKQSLSICCT
Ga0209628_1121722313300027891Termite GutMSYVYGAPSKARNANVIYIYIYMDLHLATLKQSLSICCTMF
Ga0209628_1143763313300027891Termite GutMSYIYGAPNKARNANVVYIYMDLRLATLKQSLSICCTM
Ga0209737_1000679913300027904Termite GutMSYIYIYVYGAPNKARNANVVYIYMDLRLATLKQSL
Ga0209737_1008104823300027904Termite GutMSYIYGAPSKARNANVVYIYMDLRLVTLKQSLSIC
Ga0209737_1020563113300027904Termite GutMSCIYGAPSKARNANVIYIYIYIYMDLGLATLKQSLSIS
Ga0209737_1027473113300027904Termite GutMSYIYGAPSKARNANVVYIYIYMDLRLATLKQSLSIC
Ga0209737_1046577713300027904Termite GutMSYIYEAPSKARNANVVYIYMDLRLATLKQSLSICCTM
Ga0209737_1053628213300027904Termite GutMSYIYVAPSKARNANVVYIYMDLRLATLKQSLSICCTM
Ga0209737_1069522313300027904Termite GutMSYIIIYGAPSKARNANVIYIYMDLRLATLKQSLSIC
Ga0209737_1075112913300027904Termite GutMSYIYGAPSKARNANVVYMDLRLATLKQSLSICCTM
Ga0209737_1075850133300027904Termite GutMSYIYGTPSKARNANFVYIYMDLRLATLKQSLSIC
Ga0209737_1075957213300027904Termite GutMSCIYGAPSKARNANVVYIYMDLRLATLKQSLSIC
Ga0209737_1077361913300027904Termite GutMSYIYGAPSKARNANVVYIYIYMDLRLATLKQTLS
Ga0209737_1104971613300027904Termite GutMSYIYIYGPSSKARNANVVYIYMDLRLATLKQSLSICCTMFQ
Ga0209627_106224713300027960Termite GutMSYIIIYGAPSKARNANVIYIYMDLRLATLKQSLSICCTMF
Ga0209629_1005849413300027984Termite GutMSYIYIYIYIYIYICGAPSKARNANVVYIYMDLRLATLKQSLSICCTMFQH
Ga0209629_1012564423300027984Termite GutMSYIYGAPSKARNANVIYIYMDLRLATLKQSLSICC
Ga0209629_1022146313300027984Termite GutMSYIYGAPSKARNGKRRIYMDLRLATLKQSLSICC
Ga0209629_1024343913300027984Termite GutMSYIYGAPSKARNANVVYIYIYMDLRLATLKQSLS
Ga0209629_1028990123300027984Termite GutMSYIYGAPSKARNANIIYIYMDLRLATLKQSLSICCT
Ga0209629_1033038523300027984Termite GutMSYIYGAPSKARNANVVYIYKYIYIYMNLRLATLKQSLSICCTMFQ
Ga0209629_1033585833300027984Termite GutMSYIYIYGAPSKARNANVVYIYMDLRLAKLKQSLSI
Ga0209629_1048661913300027984Termite GutMSYIYGAPSKARNANVVYIYMDLRLATLKQSLSICCTM
Ga0209629_1058607513300027984Termite GutMSYIYGAPSKSRNANVLYIYIYIYMDLRLATLKQSLSVCC
Ga0209629_1070904513300027984Termite GutMSYIYGAPSKARNANVIYMDLRLAMLKQSLSICSTMF
Ga0209629_1078736013300027984Termite GutMYIYGAPSKARNANVVYIYIYIYMDLRLATLKQSLSICCT
Ga0209629_1085219813300027984Termite GutMSYIYGAPSKARNANVVYIYMDLRLATLKQSLSICCT
Ga0209629_1096113313300027984Termite GutMSYILVYGAPSKARNANVVYIYMDLRLATLKQSLSICC
Ga0209629_1096326513300027984Termite GutMLTLRLLISYIYGAPSKARNANVVYIYMDLRLATLK
Ga0209629_1098906413300027984Termite GutMLQQLLSVRLPMTYIYGAPSKARNANVVYIYMDLRLATLKQSLS


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