Metagenome / Metatranscriptome Family F090964

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090964
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	73 residues
Representative Sequence	MPRRWKPPKEDRTDPEAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELQRLIMQFRVYVREKRGLC
Number of Associated Samples	85
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.41 %
% of genes near scaffold ends (potentially truncated)	14.81 %
% of genes from short scaffolds (< 2000 bps)	71.30 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (32.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.481 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.02% β-sheet: 0.00% Coil/Unstructured: 50.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13180	PDZ_2	14.81
PF01255	Prenyltransf	8.33
PF13365	Trypsin_2	8.33
PF00483	NTP_transferase	3.70
PF00326	Peptidase_S9	0.93
PF01797	Y1_Tnp	0.93
PF04545	Sigma70_r4	0.93
PF10009	DUF2252	0.93
PF03379	CcmB	0.93
PF00834	Ribul_P_3_epim	0.93
PF02452	PemK_toxin	0.93
PF01381	HTH_3	0.93
PF13414	TPR_11	0.93
PF00248	Aldo_ket_red	0.93
PF00589	Phage_integrase	0.93
PF13155	Toprim_2	0.93
PF13302	Acetyltransf_3	0.93
PF17137	DUF5110	0.93
PF05173	DapB_C	0.93
PF13589	HATPase_c_3	0.93
PF05706	CDKN3	0.93
PF12769	PNTB_4TM	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	8.33
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	0.93
COG0289	4-hydroxy-tetrahydrodipicolinate reductase	Amino acid transport and metabolism [E]	0.93
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.93
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.93
COG2386	ABC-type transport system involved in cytochrome c biogenesis, permease component	Posttranslational modification, protein turnover, chaperones [O]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.44 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.70 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.41 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.85 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.41 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	3.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.48 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	3.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.93 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	3.70 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.93 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.93 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	3.70 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.85 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	0.93 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.93 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001082\|JGI12664J13189_1007220	Not Available	725	Open in IMG/M
3300001593\|JGI12635J15846_10625137	Not Available	625	Open in IMG/M
3300004152\|Ga0062386_100125591	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300005541\|Ga0070733_10000022	All Organisms → cellular organisms → Bacteria	205326	Open in IMG/M
3300005541\|Ga0070733_10507952	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300005542\|Ga0070732_10083624	All Organisms → cellular organisms → Bacteria → Acidobacteria	1869	Open in IMG/M
3300005602\|Ga0070762_11169403	Not Available	531	Open in IMG/M
3300005944\|Ga0066788_10082657	Not Available	783	Open in IMG/M
3300006028\|Ga0070717_10067220	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300009038\|Ga0099829_10172412	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1738	Open in IMG/M
3300011120\|Ga0150983_12917684	Not Available	544	Open in IMG/M
3300011269\|Ga0137392_11102512	Not Available	651	Open in IMG/M
3300011270\|Ga0137391_10027561	All Organisms → cellular organisms → Bacteria	4743	Open in IMG/M
3300011270\|Ga0137391_11558086	Not Available	505	Open in IMG/M
3300011271\|Ga0137393_10132933	Not Available	2062	Open in IMG/M
3300012096\|Ga0137389_10897361	Not Available	761	Open in IMG/M
3300012189\|Ga0137388_11597811	Not Available	588	Open in IMG/M
3300012202\|Ga0137363_10468053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300012356\|Ga0137371_10446398	Not Available	1001	Open in IMG/M
3300012363\|Ga0137390_10314256	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300012363\|Ga0137390_10687047	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	986	Open in IMG/M
3300014200\|Ga0181526_10945699	Not Available	542	Open in IMG/M
3300014201\|Ga0181537_10077589	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	2253	Open in IMG/M
3300014501\|Ga0182024_10000824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	81024	Open in IMG/M
3300014654\|Ga0181525_10341067	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300014654\|Ga0181525_10909289	Not Available	500	Open in IMG/M
3300014657\|Ga0181522_10120321	Not Available	1525	Open in IMG/M
3300014657\|Ga0181522_10494063	Not Available	737	Open in IMG/M
3300017948\|Ga0187847_10339242	Not Available	823	Open in IMG/M
3300017955\|Ga0187817_10111275	Not Available	1729	Open in IMG/M
3300017966\|Ga0187776_10119453	Not Available	1590	Open in IMG/M
3300017972\|Ga0187781_10011532	All Organisms → cellular organisms → Bacteria	6332	Open in IMG/M
3300017972\|Ga0187781_10013841	All Organisms → cellular organisms → Bacteria	5717	Open in IMG/M
3300017972\|Ga0187781_10126753	Not Available	1783	Open in IMG/M
3300017972\|Ga0187781_10297130	Not Available	1146	Open in IMG/M
3300017972\|Ga0187781_10333355	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300017972\|Ga0187781_10393905	Not Available	988	Open in IMG/M
3300017973\|Ga0187780_10449838	Not Available	917	Open in IMG/M
3300017975\|Ga0187782_10210208	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1457	Open in IMG/M
3300018062\|Ga0187784_10444536	Not Available	1047	Open in IMG/M
3300018085\|Ga0187772_10011107	All Organisms → cellular organisms → Bacteria → Acidobacteria	4898	Open in IMG/M
3300018085\|Ga0187772_10128754	All Organisms → cellular organisms → Bacteria → Acidobacteria	1657	Open in IMG/M
3300018085\|Ga0187772_10195906	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300018085\|Ga0187772_10933487	Not Available	632	Open in IMG/M
3300018086\|Ga0187769_10543973	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300018086\|Ga0187769_10546322	Not Available	875	Open in IMG/M
3300018086\|Ga0187769_10600022	Not Available	832	Open in IMG/M
3300018086\|Ga0187769_10752528	Not Available	737	Open in IMG/M
3300018088\|Ga0187771_10037881	Not Available	3705	Open in IMG/M
3300018088\|Ga0187771_11370922	Not Available	600	Open in IMG/M
3300018090\|Ga0187770_10115869	Not Available	2015	Open in IMG/M
3300018090\|Ga0187770_10182102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1613	Open in IMG/M
3300018090\|Ga0187770_10542743	Not Available	922	Open in IMG/M
3300018090\|Ga0187770_10973185	Not Available	682	Open in IMG/M
3300019275\|Ga0187798_1284906	Not Available	588	Open in IMG/M
3300020579\|Ga0210407_10000001	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1072210	Open in IMG/M
3300020580\|Ga0210403_11317012	Not Available	551	Open in IMG/M
3300021170\|Ga0210400_10393654	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300021180\|Ga0210396_10047392	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3944	Open in IMG/M
3300021181\|Ga0210388_11457706	Not Available	573	Open in IMG/M
3300021402\|Ga0210385_10460175	Not Available	961	Open in IMG/M
3300021403\|Ga0210397_10422114	Not Available	1000	Open in IMG/M
3300021404\|Ga0210389_10000661	All Organisms → cellular organisms → Bacteria → Acidobacteria	29656	Open in IMG/M
3300021407\|Ga0210383_11507642	Not Available	556	Open in IMG/M
3300021432\|Ga0210384_11306992	Not Available	630	Open in IMG/M
3300021474\|Ga0210390_10107130	Not Available	2335	Open in IMG/M
3300021476\|Ga0187846_10239327	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300021477\|Ga0210398_10066041	All Organisms → cellular organisms → Bacteria	2948	Open in IMG/M
3300021478\|Ga0210402_11795402	Not Available	539	Open in IMG/M
3300022726\|Ga0242654_10223859	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300026514\|Ga0257168_1142318	Not Available	534	Open in IMG/M
3300026551\|Ga0209648_10090346	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
3300026557\|Ga0179587_11021825	Not Available	544	Open in IMG/M
3300027370\|Ga0209010_1010649	Not Available	1693	Open in IMG/M
3300027648\|Ga0209420_1075678	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300027842\|Ga0209580_10046778	All Organisms → cellular organisms → Bacteria → Acidobacteria	2008	Open in IMG/M
3300027846\|Ga0209180_10255532	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300027867\|Ga0209167_10000012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	277103	Open in IMG/M
3300027895\|Ga0209624_11065631	Not Available	521	Open in IMG/M
3300028015\|Ga0265353_1016004	Not Available	709	Open in IMG/M
3300028560\|Ga0302144_10099852	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300028779\|Ga0302266_10263049	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300028873\|Ga0302197_10377369	Not Available	630	Open in IMG/M
3300028909\|Ga0302200_10217733	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300029943\|Ga0311340_10386397	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300029999\|Ga0311339_10087289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3920	Open in IMG/M
3300029999\|Ga0311339_10550631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	1161	Open in IMG/M
3300030045\|Ga0302282_1269121	Not Available	624	Open in IMG/M
3300030053\|Ga0302177_10333287	Not Available	804	Open in IMG/M
3300031090\|Ga0265760_10048646	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300031231\|Ga0170824_103328262	Not Available	847	Open in IMG/M
3300031231\|Ga0170824_112538025	Not Available	537	Open in IMG/M
3300031474\|Ga0170818_105505321	Not Available	662	Open in IMG/M
3300031715\|Ga0307476_10005175	All Organisms → cellular organisms → Bacteria	7869	Open in IMG/M
3300031718\|Ga0307474_10028527	All Organisms → cellular organisms → Bacteria	4083	Open in IMG/M
3300031754\|Ga0307475_10174371	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1715	Open in IMG/M
3300031788\|Ga0302319_10208269	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300031962\|Ga0307479_10000149	All Organisms → cellular organisms → Bacteria → Acidobacteria	64900	Open in IMG/M
3300031962\|Ga0307479_11050879	Not Available	782	Open in IMG/M
3300032180\|Ga0307471_100117237	All Organisms → cellular organisms → Bacteria	2469	Open in IMG/M
3300032783\|Ga0335079_10000002	All Organisms → cellular organisms → Bacteria → Acidobacteria	718107	Open in IMG/M
3300032805\|Ga0335078_10202631	All Organisms → cellular organisms → Bacteria → Acidobacteria	2753	Open in IMG/M
3300032892\|Ga0335081_10343978	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	1948	Open in IMG/M
3300032898\|Ga0335072_10224118	Not Available	2195	Open in IMG/M
3300033134\|Ga0335073_10253226	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	2144	Open in IMG/M
3300033807\|Ga0314866_005633	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300034124\|Ga0370483_0001192	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7221	Open in IMG/M
3300034163\|Ga0370515_0017175	All Organisms → cellular organisms → Bacteria → Acidobacteria	3355	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.67%
Aquatic	Environmental → Aquatic	8.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.48%
Peat	Environmental → Terrestrial → Peat	9.26%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Cave	Environmental → Terrestrial → Cave	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	32.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	7.41%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	30.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	22.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.63%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.63%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.85%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.85%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.93%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.93%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12664J13189_10072202	3300001082	Forest Soil	MPPRWKPPKEDRVDEESVRRERVFQQDLSDVLEYGTEEDFVAMLKMHKPNMEKEELRMLIKQFRVYVREKRGLC*
JGI12635J15846_106251371	3300001593	Forest Soil	MPRRWRPPKEDRTDADAVRREGEFQQDLSDILEYGTVDDLVDLLKWHKPDIAKEELQTAIRQFHVYAREKRGLC*
Ga0062386_1001255912	3300004152	Bog Forest Soil	MAGRWKPRREDRTDADAVRREREFQQDLSEILEYGTEDDFVVALKNYKPDIGKEKLQESIMQFRVYLREKRGLG*
Ga0070733_100000227	3300005541	Surface Soil	MAGRWKPRKEDRTDAEAVRREQQFQQDLSDILEYGTEDDFVAALKNYKPDIGKEELQESIMQFRVYVREKRGLC*
Ga0070733_105079522	3300005541	Surface Soil	MPRRWKPPREERIEAESLRREREFQQDLSDILEYGTEEDFVATLKMHKPDIGKDELRGLIMQFRVYLREKRGLC*
Ga0070732_100836243	3300005542	Surface Soil	MAGRWKPPKSERTDAEAVRRERRYQEDMSDILEYGTEDDFIAFLKLNRPDLGKEELQELVRQFHSYAREKRGLC*
Ga0070762_111694032	3300005602	Soil	MAARWKPPKEDRTDADTVRREREFQQDLSDILEYGTEDDFVVALKNYKPDIGKEELRQSIMHFRVYVREKRGLC*
Ga0066788_100826572	3300005944	Soil	MPRRWKPPKEDRTDAEAVRRSRQFQQDMRDILEYGSEEDFVVLVKKEKPEIGKEELQLLIKQFHAYAREKRGLY*
Ga0070717_100672203	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAGRWKPPKEQRTDADAVRREQEFQRDLADILEYGTEDDFVAALKMHKPDIGKEELQMLIMQFRVYVREKRGLC*
Ga0099829_101724122	3300009038	Vadose Zone Soil	WKPPKEDRTDPEAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELHRLIMQFRVYVREKRGLC*
Ga0150983_129176841	3300011120	Forest Soil	LGRNASIPRLEERFSHAGRWKPPKEDRTDADAVHREREFQQDLSDILEYGTEDDFVVALKNYKPDIGKDKLQESIMQFRVYLREKRGLC*
Ga0137392_111025121	3300011269	Vadose Zone Soil	MASRWKPPKEDRTDPDAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELRMLIMQFRVYVREKRGLC*
Ga0137391_100275612	3300011270	Vadose Zone Soil	MPRRWKPPKEDRTDPDAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELHRLIMQFRVYVREKRGLC*
Ga0137391_115580861	3300011270	Vadose Zone Soil	MVRPWRPPKEQRTDAEAVRREQEFQRDLSDILEYGTEDDFVATLKIHKPGIGTEELQMLI
Ga0137393_101329333	3300011271	Vadose Zone Soil	MPRRWKPPKEDRTDPEAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELQRLIMQFRVYVREKRGLC*
Ga0137389_108973612	3300012096	Vadose Zone Soil	MASRWKPPKEDRTDPEAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELQRLIMQFRVYVREKRGLC*
Ga0137388_115978111	3300012189	Vadose Zone Soil	MPRRWKPPKEDRTDPEAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELRMLIMQFRVYAREKRGLY*
Ga0137363_104680532	3300012202	Vadose Zone Soil	MPRRWKPPKEDRVDMDAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELRMLIMQFRVYAREKRGLY*
Ga0137371_104463983	3300012356	Vadose Zone Soil	MPQRWKPPKSDRTDVEAVRREREFQQDLSDILEYGTEDDFVAALKIHKPDIGKEQLQTLIKQFHVYVREKRGLC*
Ga0137390_103142563	3300012363	Vadose Zone Soil	MPRRWKPPKEDRTDPEAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELHRLIMQFRVYVREKRGLC*
Ga0137390_106870473	3300012363	Vadose Zone Soil	MASRWKPPKEDRTDPDAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELQRLI
Ga0181526_109456991	3300014200	Bog	MPRRWKPPKSDRTDAEAVRREERFQKDLSDILEYGTEEDFVALLKWHKPDIGKEELQTAIRQFHVYAREKRGLC*
Ga0181537_100775893	3300014201	Bog	MARRWKPPKEDRIDADAVRREEEFRQDLADILEYGTEDDFVAMLKIRKPGIGQEELRMLIMQFRGYVREKRGLY*
Ga0182024_1000082483	3300014501	Permafrost	LLETAEGGSKDAEAVRREREFQQDLADILEYGTEEDFVAMLKIRKPDIGQEELRMLIMQFRVYVREKRGLY*
Ga0181525_103410672	3300014654	Bog	MAGRWKPRKEDRTDADAIRREREFQQDLRDILEYGTEDDFVAALKNYKPDIGKEELRESIMQFRVYVREKRGLC*
Ga0181525_109092891	3300014654	Bog	MARRWKPPKEDRIDADAVRREEEFRQDLADILEYGTEDDFVAMLKIRKPGIGQEELRMLIMQFRGYVREK
Ga0181522_101203212	3300014657	Bog	MSCRGDREKKQTMPHRWKPPKDKRTDAEAVRREREFQQDLSDILEYGTEDDFVAMLKIHKPDVGKEELRTLIMQFRVYVREKRGLC*
Ga0181522_104940631	3300014657	Bog	MPRRWKPPKEDRRDADAVRREERFQEDLSDILEYGTEEDCVALLKWHKPDIGKEELQTAIRQFHVYAREKRGLC*
Ga0187847_103392422	3300017948	Peatland	MPRRWKPPKEDRTDSEAVRRDAEFRRKLRDVLEHGDEDDFVAVLRSYKPEISKEDLRNAIMQFHVYAREKRGLY
Ga0187817_101112752	3300017955	Freshwater Sediment	MPRQWKPPREERTDAEAVRREQEFQRDLADILEYGTEDDFVAMLKLRKPDIGKEELQMLIMQFRVYAREKRGLC
Ga0187776_101194532	3300017966	Tropical Peatland	MAGRWKPPKDQRIDAEAVRRKSQFLQDLKDILEYGSEDDFIAGVKIEKPDIGKEELQKLIMQFRAYVREKRGLY
Ga0187781_100115323	3300017972	Tropical Peatland	MSSRWKPPKSERTDTEAIRREQRSQQDLSDILEYGTEDDFVACLKLHKPGIGKEELQDLIRQFHAYAGEKRGLC
Ga0187781_100138412	3300017972	Tropical Peatland	MAGRWKPPKSQRIDANAVRREQEFQQDLSDILEYGTEEDFVAVLKAYKPGIGKDELQALIMRFRDAAREKRGLC
Ga0187781_101267532	3300017972	Tropical Peatland	MPGRWKPPKEQRTDAEAVRRERQFQQDLGEILDHGTEDDFVALLKAHRPEIKPEELRMAIMQFRVYVREKRGLC
Ga0187781_102971303	3300017972	Tropical Peatland	MTSRWKPPREERVDADAIRSEQEFREKLRDVLEYGGEDDFVAVLKAYKPDVGKEELQGLIMQFRAYAREKRGLC
Ga0187781_103333553	3300017972	Tropical Peatland	VIASSERTDSEAIRREHQFQSDLSDILDHGTEEDFVKLLKWHKPQIGKEELQEAVRQFHVYAREKRGFC
Ga0187781_103939052	3300017972	Tropical Peatland	MKSRWKPPKSERTDAEAERREQRSLEDLSEILEYGTEEDFVVYLKKHKPDIGKEELQEAIRQFHVYAREKRGFC
Ga0187780_104498382	3300017973	Tropical Peatland	MTSRWKPPKEQRVDAEAIRSERVFRQKLRDALEYGGEDDFVAVVKAYKPDIGKEELQGLIMQF
Ga0187782_102102083	3300017975	Tropical Peatland	MPGRWKPPKSERTDLEAIRCEQQFQRDLSGILDHGSEDDFVKLLKWYKPQIGKEELQEAVRQFYVYAREKRGLC
Ga0187784_104445362	3300018062	Tropical Peatland	MTSRWKPPREERVDADAIRSEQEFREKLRDVLEYGGEDDFVAVLKAYKPDVGKEELQGLITQFRAYAREKRGLC
Ga0187772_100111073	3300018085	Tropical Peatland	MAGRWKPPKEDRIDVEAVRREREFQRKLRDVLEYGGEDDFVGVLKNYQPNMTKEELRAAIMQFRVSVREKRGL
Ga0187772_101287543	3300018085	Tropical Peatland	MTSRWKPPKSERTDAEAVRREERSQQDLSDILEYGTEEDFVEYLKLHKPGIGKEELQTAIKQFHVYAREKRGLC
Ga0187772_101959061	3300018085	Tropical Peatland	MDADAVRREQEFQQDLSDILEYGTEEDFVAVLKAYKPGIGKDELQALIMRFRDAAREKRGLC
Ga0187772_109334872	3300018085	Tropical Peatland	MAGRWKPPKEDRTDTEAVRRKSRFLQDVGAILEYGTEEDFIAAAKKLKPDIGKQELRELIMQFRAYVREKRGLY
Ga0187769_105439732	3300018086	Tropical Peatland	MSSRWKPPKSERTDPEVVRREQRSQQDLSDILEYGTEDDFVAYLKLHKPGIGKEELQEAIRQFHVYAREKRGLC
Ga0187769_105463222	3300018086	Tropical Peatland	MAGRWKPPKEQRVEAEAIRRERGFQRDLSDILDHGGEDDFVALLKAHRPEITPEELRTAIMQFRVSVREKRGLY
Ga0187769_106000222	3300018086	Tropical Peatland	MTGRWKPPKSERIDAEAVRREQRFQRYLSDILEYGTEDDFVALLKWHKKDIGKEELQEAIRQFHVYAREKRGLC
Ga0187769_107525281	3300018086	Tropical Peatland	MAGRWKPPKSKRTDADAVRREQEFQQDLSDILEYGTEEDFVAALKIYKPDVGKEQLQTLIMQFRDAVREKRGLC
Ga0187771_100378815	3300018088	Tropical Peatland	MTTRWKPPKEQRVDADSIRSEQEFRQKLRDVLEYGGEDDFVAVLKAYKPDIGKEELQGLIMQFRVYAREKRGLC
Ga0187771_113709222	3300018088	Tropical Peatland	MAGRWKPRKEERTDADAVRREQQFHRDLSDILEYGTEEDFVAALKIYKPDIGKEQLQTLIMQFRDAVREKRGLC
Ga0187770_101158693	3300018090	Tropical Peatland	MTTRWKPPKEQRVDADSIRSEQEFRQKLRDVLEYGGEDDFVAVLKAYKPDIGKEELQGLIMQFRAYAREKRGLC
Ga0187770_101821022	3300018090	Tropical Peatland	MAGRWKPPKSERIDTDAVRREQEFQQDLSDILEYGTEEDFVVALKIHKPDIRKEELRTLIMQFRDAVREKRGLC
Ga0187770_105427432	3300018090	Tropical Peatland	MAGRWKPPKEDRIDVEAVRREREFQRKLRDVLEYGGEDDFVGVLKNYQPNMTKEKLRAAIMQFRVSVREKRGL
Ga0187770_109731852	3300018090	Tropical Peatland	MPGRWKPPKSERTDSEAIRREHQFQGDLSDILDHGTEEDFVKLLKWHKPQIGKEELQEAVRQFHVYAREKRGLC
Ga0187798_12849061	3300019275	Peatland	MRGRWKPPKERRIDENAVRRERQFQEDLGEILDYGTEDDFVAFLKAHRPEIKPEELRMAIMQFRVYVREKRGLC
Ga0210407_10000001708	3300020579	Soil	MPRRWKPPKEDRTDAEAVRREERFQRDLSDILEYGTVEDFVALLKWHQPDIAKEELQTAIRQFHVYAREKRGLC
Ga0210403_113170122	3300020580	Soil	MAARWKPPKEDRTDADTVRREREFQQDLSDILEYGTEDDFVVALKNYKPDIGKEELRQSIMHFRVYVREKRGLC
Ga0210400_103936542	3300021170	Soil	MPRQWKPPKEDRTDAGAVHREREFKQDLRDILEYGTEDDFVVALKNYKPEIGKEELQQAIMQFHVYVREKRGLC
Ga0210396_100473922	3300021180	Soil	MPGRWKPPKEDRVDLNSVRRDEEFKRELGHVLEYGTEDDFVAVLKSYKPDIGKEELKNSIMQFRVFVREKRGL
Ga0210388_114577062	3300021181	Soil	MPRRWRPPKEDRTDADAVRREGEFQQDLSDILEYGTVDDLVDLLKWHKPDIAKEELQTAIRQFHVYAREKRGLC
Ga0210385_104601751	3300021402	Soil	MPRRWKPPKEDRTDAEAVRREREFRQDLSDILEYGTEDDFVVALKNYKPDTSKEELQQAIMQFHVYV
Ga0210397_104221141	3300021403	Soil	MPRRWKPPKEDRTDAEAVRREERFQRDLSDILEYGTVEDFVALLKWHQPDIAKEELQTAIRQ
Ga0210389_1000066133	3300021404	Soil	MPRRWKPPKEDRTDAEAVRREREFRQDLSDILEYGTEDDFVVALKNYKPDIGKEELQQAIMQFHVYVREKRGLC
Ga0210383_115076422	3300021407	Soil	MSPRWRPPKEDRTDADAVRREREFQQDLSDILEFGTEEEFVAMLKIRKPDIGNEELRTLIMQFRAYLREKRGLY
Ga0210384_113069922	3300021432	Soil	MASRWKPPKEDRIDAEAVRREQQFQRDLSDILEYGTEDDFVAFLKLNRPDLGKEELQELVRQFHSYAREKRGLC
Ga0210390_101071304	3300021474	Soil	MPRRWKPPKEDRTDAEAVRREREFRQDLSDILEYGTEDDFVVALKNYKPDIGKEELQQAIMQFHV
Ga0187846_102393272	3300021476	Biofilm	MSARWRPPKEERTEADAVRREQQFQRDLSDILEYGTEDDFVAALKIRKPDIGKQELQTAIMHFRVYAREKRGLC
Ga0210398_100660413	3300021477	Soil	MPRRWKPPKEDRTDAEAVRREREFRQDLSDILEYGTEDDFVVALKNYKPEIGKEELQQAIMQFHVYVREKRGLC
Ga0210402_117954022	3300021478	Soil	MPGRWKPPKEDRTDAEAVRREERFQKDLSDILEYGTEEDFVALLKWHKPDIGKEELQTAIRQFHVCAREKRGLC
Ga0242654_102238591	3300022726	Soil	RTDADAVHREREFQQDLSDILEYGTEDDFVVALKNYKPDIGKDKLQESIMQFRVYLREKRGLC
Ga0257168_11423181	3300026514	Soil	EDRTDPEAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELHRLIMQFRVYVREKRGLC
Ga0209648_100903462	3300026551	Grasslands Soil	MPRRWKPPKEDRTDPEAARREREFQQDLADILEYGTEDDFVAMSKIRKPDIGKEELQRLIMQFRVYVREKRGLC
Ga0179587_110218252	3300026557	Vadose Zone Soil	MSPRWKPPKEDRTDAEAVRRERQFLQDMRDILEYGTEEDFVALLKKQKPDIGKEELQILIKQFHVYARERRGLC
Ga0209010_10106491	3300027370	Forest Soil	MPPRWKPPKEDRVDEESVRRERVFQQDLSDVLEYGTEEDFVAMLKMHKPNMEKEELRMLIKQFRVYVREKRGLC
Ga0209420_10756781	3300027648	Forest Soil	QCVRIDLRNRPMPRRWKPPKENRVDEEAVRRERQFQQDLSDVLEYGTEDAFVAMLKMHKPNMGQEELRMLIMQFRVYVREKRGLC
Ga0209580_100467783	3300027842	Surface Soil	MAGRWKPPKSERTDAEAVRRERRYQEDMSDILEYGTEDDFIAFLKLNRPDLGKEELQELVRQFHSYAREKRGLC
Ga0209180_102555322	3300027846	Vadose Zone Soil	MPRRWKPPKEDRTDPEAARREREFQQDLADILEYGTEDDFVAMLKIRKPDIGKEELQRLIMQFRVYVREKRGLC
Ga0209167_10000012241	3300027867	Surface Soil	MAGRWKPRKEDRTDAEAVRREQQFQQDLSDILEYGTEDDFVAALKNYKPDIGKEELQESIMQFRVYVREKRGLC
Ga0209624_110656312	3300027895	Forest Soil	MPRRWKPPKENRVDEEAVRREREFQQDLSDVLEYGTEDAFVAMLKMHKPNMEKEELRMLIKQFRVYVREKRGLC
Ga0265353_10160042	3300028015	Soil	MPRRWKPPKEERVDLDAVRREEEFRRKLRDVLEYGTEDDFVEVLKSYKPEIGKEELLTSIMQFRVYVREKRGLC
Ga0302144_100998522	3300028560	Bog	MANRWKPPKEDRTDLDAVRREREFQQDLADILEYGTEDDFVAMLKLRKPDIGKEELQTLIMQFRVYVREKRGLY
Ga0302266_102630493	3300028779	Bog	VMANRWKPPKEDRTDLDAVRREREFQQDLADILEYGTEDDFVAMLKLRKPDIGKEELQTLIMQFRVYVREKRGLY
Ga0302197_103773691	3300028873	Bog	MANRWKPPKEDRTDLDAVRREREFQQDLADILEYGTEDDFVAMLKLRKPDIGKEELQTLIMQFRVYVREKRG
Ga0302200_102177333	3300028909	Bog	MANRWKPPKEDRTDLDAVRREREFQQDLADILEYGTEDDFVAMLKLRKPDIGKEELQTLIMQFRVYVRE
Ga0311340_103863973	3300029943	Palsa	MPRRWKPPKEDRTDADAVRREREFQQDLSDILEYGTEEDFVAMLKIRKPDIGKEELQRLITQFHVYVREKRGLC
Ga0311339_100872896	3300029999	Palsa	MPRGWKPPKQERVDEEAVRREREFQRDLRDILEYGTEDDFVATLKMHKPNMGKEELRTLIMQFRVYVREKRGLC
Ga0311339_105506312	3300029999	Palsa	MTRRWKPPKEQRTDADAVRREREFQQDLRDILEYGTEDDFVAALKNYKPDIGKAELRESIMQFRVYLREKRGLG
Ga0302282_12691211	3300030045	Fen	MANRWKPPKEDRTDLDAVRREREFQQDLADILEYGTEDDFVAMLKLRKPDIGKEELQTLI
Ga0302177_103332872	3300030053	Palsa	MPRRWKPPKEDRTDADAVRREREFQQDLSDILEYGTEDFVAMLKIRKPDIGKEELQRLITQFHVYVREKRGLC
Ga0265760_100486463	3300031090	Soil	MAGRWKPPKEDRTDADAVRREREFQRDLSDILEYGTEDDFVVALKNYKPDIGKEELRESITQFRVYLREKRGLC
Ga0170824_1033282621	3300031231	Forest Soil	MGSGAALAKRVQNMAGRWKPRREDRTDADAVRREREFQQDLSDILEYGTEDDFVVALKNYKPDIGKEELQASIMQFRVYLREKRGLC
Ga0170824_1125380251	3300031231	Forest Soil	MAGRWKPPKEQRIDPDAVRREREFQQDLGDILEYGTEEDFVAMLKLRKPDIGKEELRRLIMQFRVYAREKRGLY
Ga0170818_1055053212	3300031474	Forest Soil	MGSGAALAKRVQNMAGRWKPRREDRTDADAVRREREFQQDLSDILEYGTEDDFVVALKNYKPDIGKEELQESIMQFRVYLREKRGLC
Ga0307476_100051756	3300031715	Hardwood Forest Soil	MATRWKPPKEDRTDADAVRREREFQRDLRDILEYGTEDDFVVALKNYKPDIGKEELRQAIMQFHVYVREKRGLC
Ga0307474_100285274	3300031718	Hardwood Forest Soil	MATRWKPPKEDRTDADAVRRKREFQRDLRDILEYGTEDDFVVALKNYKPDIGKEELRQAIMQFHVYVREKRGLC
Ga0307475_101743713	3300031754	Hardwood Forest Soil	MAGRWKPPKKQRMDADAVRREREFQQDLSDILEYGTEDDFVATLKMHKPDIGKEELQTLIMQFRAYVREKRGLC
Ga0302319_102082691	3300031788	Bog	MPSRWKPPKEDRVDLDAVRREREFQQDLAEILEYGTEEDFVAMLKLRKPDIGKEELQTLIMQFRVYVREKRGLY
Ga0307479_1000014911	3300031962	Hardwood Forest Soil	MARLWKPPKADRTDPDAVRREREFRQDLSDILEYGTEDDFVAALKMHKPDIGKEELQKLIMQFRVYVREKRGLC
Ga0307479_110508792	3300031962	Hardwood Forest Soil	MPRRWKPPKEDRTDAEAVRREKEFQKDLRDILEYGIEDDFVAALKMHKPDIGKEELRMLIMQFRVYVREKRGLC
Ga0307471_1001172374	3300032180	Hardwood Forest Soil	MAGRWKPPKDQRTDADAVRRERKFQQDLSDILEYGTEGDFVAMLKIRKPDIGKEELRMLIMQFRVYVREKRGLC
Ga0335079_1000000275	3300032783	Soil	MSSRWKPPKEDRIDAEAVRRERRSQEDLSEILEYGTEDDFVAYLKLHKPGIKKEELREAIRQFYVYAREKRGLC
Ga0335078_102026315	3300032805	Soil	MPRRWKPPKQERTDMDAVRREQRFQEDMRDILEHGTEDDFVALLKWHKPGIGKEELKALIMQFHVYVREKRGLC
Ga0335081_103439783	3300032892	Soil	MAGRWKPLKSERTDAEAIRREQQSQRDLSDILEYGTEEDFVAYLKLHKPGIGKEELQDLTKQFHAYAREKRGLC
Ga0335072_102241182	3300032898	Soil	MPRRWKPPKEDRTDTEAVRREREFQQDLRDILEYGTEDDFVAALKGYEPDIGKEELQESIMQFRVYVREKRGLC
Ga0335073_102532262	3300033134	Soil	MPRRWKPPKEDRTDAEAVRREREFQQDLRDILEYGTEDDFVAALKGYEPDIGKEELQESIMQFRVYVREKRGLC
Ga0314866_005633_233_457	3300033807	Peatland	MTSRWKPPKEQRVDAEAIRSERVFRQKLRDALEYGGEDDFVAVVKAYKPDIGKEELQGLIMQFHACAREKRGLC
Ga0370483_0001192_642_866	3300034124	Untreated Peat Soil	MANRWKPPKEDRTDPDAVRREREFQQDLADILEYGTEDDFVAMLKLRKPDIGKEELQTMIMQFRVYVREKRGLY
Ga0370515_0017175_2179_2403	3300034163	Untreated Peat Soil	MPRRWRPPKEDRTDADAVRREGEFQQDLSDILEYGTVDDLVDLLKWHKPDIVKEELQTAIRQFHVYAREKRGLC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090964

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences