NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090952

Metagenome Family F090952

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090952
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 56 residues
Representative Sequence MAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGE
Number of Associated Samples 88
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 7.41 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 87.04 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (64.815 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(59.259 % of family members)
Environment Ontology (ENVO) Unclassified
(53.704 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(56.481 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 61.73%    β-sheet: 0.00%    Coil/Unstructured: 38.27%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF00486Trans_reg_C 84.26
PF01569PAP2 6.48
PF10150RNase_E_G 2.78
PF06144DNA_pol3_delta 1.85
PF01467CTP_transf_like 1.85
PF12094DUF3570 0.93
PF02590SPOUT_MTase 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG1466DNA polymerase III, delta subunitReplication, recombination and repair [L] 1.85
COG2812DNA polymerase III, gamma/tau subunitsReplication, recombination and repair [L] 1.85
COG157623S rRNA pseudoU1915 N3-methylase RlmHTranslation, ribosomal structure and biogenesis [J] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A64.81 %
All OrganismsrootAll Organisms35.19 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c0806088Not Available589Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105058922Not Available620Open in IMG/M
3300000955|JGI1027J12803_100889096All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2129Open in IMG/M
3300001154|JGI12636J13339_1034313Not Available662Open in IMG/M
3300001867|JGI12627J18819_10307879Not Available638Open in IMG/M
3300004092|Ga0062389_103552431Not Available585Open in IMG/M
3300005437|Ga0070710_10186679All Organisms → cellular organisms → Bacteria → Proteobacteria1301Open in IMG/M
3300005538|Ga0070731_10022536All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4336Open in IMG/M
3300005538|Ga0070731_10108691All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1836Open in IMG/M
3300006059|Ga0075017_101582846Not Available517Open in IMG/M
3300009826|Ga0123355_11733272Not Available593Open in IMG/M
3300010048|Ga0126373_10333229All Organisms → cellular organisms → Bacteria → Proteobacteria1524Open in IMG/M
3300010048|Ga0126373_10652108Not Available1108Open in IMG/M
3300010358|Ga0126370_10476973Not Available1047Open in IMG/M
3300010359|Ga0126376_12595906Not Available555Open in IMG/M
3300010361|Ga0126378_10847047Not Available1022Open in IMG/M
3300010361|Ga0126378_11793644Not Available698Open in IMG/M
3300010366|Ga0126379_13737054Not Available510Open in IMG/M
3300014501|Ga0182024_11712297Not Available708Open in IMG/M
3300015052|Ga0137411_1101661Not Available1152Open in IMG/M
3300017936|Ga0187821_10505358Not Available505Open in IMG/M
3300017959|Ga0187779_11111182Not Available553Open in IMG/M
3300017966|Ga0187776_10079331All Organisms → cellular organisms → Bacteria → Proteobacteria1918Open in IMG/M
3300021171|Ga0210405_10261066All Organisms → cellular organisms → Bacteria → Proteobacteria1370Open in IMG/M
3300021180|Ga0210396_10036889All Organisms → cellular organisms → Bacteria → Proteobacteria4512Open in IMG/M
3300021180|Ga0210396_11131500Not Available658Open in IMG/M
3300021407|Ga0210383_10794570Not Available810Open in IMG/M
3300021474|Ga0210390_10497529Not Available1027Open in IMG/M
3300021474|Ga0210390_10961358Not Available700Open in IMG/M
3300021474|Ga0210390_11268575Not Available592Open in IMG/M
3300021477|Ga0210398_10233912All Organisms → cellular organisms → Bacteria → Proteobacteria1497Open in IMG/M
3300021560|Ga0126371_11436143Not Available820Open in IMG/M
3300021560|Ga0126371_12272234Not Available655Open in IMG/M
3300024181|Ga0247693_1041309Not Available654Open in IMG/M
3300024279|Ga0247692_1039527Not Available726Open in IMG/M
3300024283|Ga0247670_1057034Not Available706Open in IMG/M
3300025905|Ga0207685_10299036Not Available796Open in IMG/M
3300025929|Ga0207664_10047360All Organisms → cellular organisms → Bacteria → Proteobacteria3376Open in IMG/M
3300027109|Ga0208603_1052514Not Available618Open in IMG/M
3300027537|Ga0209419_1071095Not Available685Open in IMG/M
3300027667|Ga0209009_1171563Not Available551Open in IMG/M
3300027867|Ga0209167_10040357Not Available2267Open in IMG/M
3300031544|Ga0318534_10146834All Organisms → cellular organisms → Bacteria → Proteobacteria1360Open in IMG/M
3300031545|Ga0318541_10579466Not Available628Open in IMG/M
3300031546|Ga0318538_10393722Not Available749Open in IMG/M
3300031549|Ga0318571_10181318Not Available744Open in IMG/M
3300031573|Ga0310915_10043648All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2865Open in IMG/M
3300031679|Ga0318561_10093929All Organisms → cellular organisms → Bacteria → Proteobacteria1568Open in IMG/M
3300031680|Ga0318574_10003800All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6174Open in IMG/M
3300031715|Ga0307476_10003221All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria9731Open in IMG/M
3300031715|Ga0307476_10642820Not Available786Open in IMG/M
3300031724|Ga0318500_10028349All Organisms → cellular organisms → Bacteria → Proteobacteria2219Open in IMG/M
3300031724|Ga0318500_10207171Not Available941Open in IMG/M
3300031724|Ga0318500_10279135Not Available815Open in IMG/M
3300031744|Ga0306918_10844152Not Available714Open in IMG/M
3300031753|Ga0307477_10246424All Organisms → cellular organisms → Bacteria → Proteobacteria1238Open in IMG/M
3300031763|Ga0318537_10184312Not Available777Open in IMG/M
3300031765|Ga0318554_10472294Not Available710Open in IMG/M
3300031769|Ga0318526_10003938All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4193Open in IMG/M
3300031778|Ga0318498_10091560All Organisms → cellular organisms → Bacteria → Proteobacteria1375Open in IMG/M
3300031778|Ga0318498_10538787Not Available512Open in IMG/M
3300031779|Ga0318566_10202893Not Available984Open in IMG/M
3300031780|Ga0318508_1115895Not Available750Open in IMG/M
3300031781|Ga0318547_10954098Not Available536Open in IMG/M
3300031782|Ga0318552_10186009Not Available1049Open in IMG/M
3300031782|Ga0318552_10239025Not Available921Open in IMG/M
3300031792|Ga0318529_10160706Not Available1036Open in IMG/M
3300031794|Ga0318503_10081541Not Available1015Open in IMG/M
3300031796|Ga0318576_10423466Not Available629Open in IMG/M
3300031797|Ga0318550_10435046Not Available634Open in IMG/M
3300031798|Ga0318523_10048750All Organisms → cellular organisms → Bacteria → Proteobacteria1984Open in IMG/M
3300031799|Ga0318565_10352908Not Available713Open in IMG/M
3300031823|Ga0307478_10855657Not Available761Open in IMG/M
3300031831|Ga0318564_10384953Not Available614Open in IMG/M
3300031835|Ga0318517_10211051Not Available875Open in IMG/M
3300031846|Ga0318512_10092712Not Available1411Open in IMG/M
3300031879|Ga0306919_10099162All Organisms → cellular organisms → Bacteria → Proteobacteria2046Open in IMG/M
3300031896|Ga0318551_10921119Not Available510Open in IMG/M
3300031912|Ga0306921_11983212Not Available620Open in IMG/M
3300031946|Ga0310910_10238586All Organisms → cellular organisms → Bacteria → Proteobacteria1419Open in IMG/M
3300031946|Ga0310910_10655338Not Available831Open in IMG/M
3300031962|Ga0307479_10318541All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1537Open in IMG/M
3300031962|Ga0307479_11305667Not Available686Open in IMG/M
3300031981|Ga0318531_10368475Not Available650Open in IMG/M
3300032001|Ga0306922_10483776All Organisms → cellular organisms → Bacteria → Proteobacteria1320Open in IMG/M
3300032001|Ga0306922_10890762Not Available925Open in IMG/M
3300032008|Ga0318562_10091504All Organisms → cellular organisms → Bacteria → Proteobacteria1717Open in IMG/M
3300032009|Ga0318563_10123987All Organisms → cellular organisms → Bacteria → Proteobacteria1377Open in IMG/M
3300032009|Ga0318563_10212039Not Available1045Open in IMG/M
3300032039|Ga0318559_10039806Not Available1925Open in IMG/M
3300032041|Ga0318549_10030259All Organisms → cellular organisms → Bacteria → Proteobacteria2127Open in IMG/M
3300032043|Ga0318556_10096338All Organisms → cellular organisms → Bacteria → Proteobacteria1493Open in IMG/M
3300032052|Ga0318506_10047058All Organisms → cellular organisms → Bacteria → Proteobacteria1727Open in IMG/M
3300032054|Ga0318570_10355056Not Available667Open in IMG/M
3300032060|Ga0318505_10446680Not Available611Open in IMG/M
3300032063|Ga0318504_10038360All Organisms → cellular organisms → Bacteria → Proteobacteria1952Open in IMG/M
3300032064|Ga0318510_10092792Not Available1138Open in IMG/M
3300032065|Ga0318513_10028068All Organisms → cellular organisms → Bacteria → Proteobacteria2413Open in IMG/M
3300032065|Ga0318513_10088096All Organisms → cellular organisms → Bacteria → Proteobacteria1440Open in IMG/M
3300032068|Ga0318553_10004318All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans5770Open in IMG/M
3300032068|Ga0318553_10137763All Organisms → cellular organisms → Bacteria → Proteobacteria1260Open in IMG/M
3300032068|Ga0318553_10496490Not Available640Open in IMG/M
3300032091|Ga0318577_10056367All Organisms → cellular organisms → Bacteria → Proteobacteria1774Open in IMG/M
3300032770|Ga0335085_10408016All Organisms → cellular organisms → Bacteria → Proteobacteria1575Open in IMG/M
3300032828|Ga0335080_12266772Not Available520Open in IMG/M
3300033289|Ga0310914_10180506All Organisms → cellular organisms → Bacteria → Proteobacteria1878Open in IMG/M
3300033289|Ga0310914_10810612Not Available834Open in IMG/M
3300033290|Ga0318519_10063006All Organisms → cellular organisms → Bacteria → Proteobacteria1898Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil59.26%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.33%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.63%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.63%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.85%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.85%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.93%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.93%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.93%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.93%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001154Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300009826Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1Host-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024181Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34EnvironmentalOpen in IMG/M
3300024279Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027109Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)EnvironmentalOpen in IMG/M
3300027537Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_080608812228664022SoilMAIAVASAACAVFLLLGLVVYRAVAVNTAVEFDELLQQQAALALRYADHEYDEGDAVVPPAPAPA
INPhiseqgaiiFebDRAFT_10505892223300000364SoilMAIAVASAACAVFLLLGLVVYRAVAVNTAVEFDELLQQQAALALRYADHEYDEGDAVVPPAPAPAGAALVPPAPATG
JGI1027J12803_10088909613300000955SoilMAIAVASAACAVFLLLGLVVYRAVAVNTAVEFDELLQQQAALALRYADHEYDEGDAVVPPAPAPAGAALV
JGI12636J13339_103431313300001154Forest SoilMAIAVVGAACLVFMXLGLLVYRAVATSTARQFDELLQQQAALALRYADHEYREGETVVPASLTDSGQPVQFDV
JGI12627J18819_1030787913300001867Forest SoilMAVAAASAACVVFLLLGLLVYRSVAASTAVQFDELLQQQAALALSYADHEYGE
Ga0062389_10355243113300004092Bog Forest SoilMAMAVAGAAWVVFLILGLLVYRAVAGSTAAQFDEMLQQQAVLALRYADHEYGEGDSVVPR
Ga0070710_1018667933300005437Corn, Switchgrass And Miscanthus RhizosphereMAVAAAAAACVVFMLLGLLVYRAVTASTAVQFDELLQQQA
Ga0070731_1002253673300005538Surface SoilMAVALSSTACAVFLILGVLVYRAVASSTASQFDEMLQQEAALALRYADHEYGE
Ga0070731_1010869133300005538Surface SoilMAVALSSAACAVFLILGVLVYRAVASSTASQFDELLQQEAALALRYADHEYGEGESLVPPSLIAPGR
Ga0075017_10158284623300006059WatershedsMALAAAGSACAVFLLLGGLVYRAVATSTAMQFDELLQQQAAL
Ga0123355_1173327223300009826Termite GutMALAVAAAACAVFLILGLLVHRAVAINTALQFDQMLQQQA
Ga0126373_1033322913300010048Tropical Forest SoilMAIAVAGAACAVFLILGVLVYRAVASSTAMQFDELL
Ga0126373_1065210833300010048Tropical Forest SoilMAIAVASAACAVFLILGLLVYQAVASSTATQFDEMLQQQAALALRYADHEYNEGDAPVPASL
Ga0126370_1047697313300010358Tropical Forest SoilMAIAVASAACAVFLLLGLVVYRAVAANTAVEFDELLQHQAALALRYADHEYDEGDAVVPPAS
Ga0126376_1259590613300010359Tropical Forest SoilMAIAVASAACAVFLLLGVVVYRAVAANTAVEFDELLQHQAALALRYADHEDDEGDA
Ga0126378_1084704713300010361Tropical Forest SoilMALATAGAACVVFAILGLLVYRAVASSTAAEFDQMLQQQAALALRYADHEYAEG
Ga0126378_1179364413300010361Tropical Forest SoilMAIAVASAACAVFLILGLLVYQAVASSTATQFDEMLQQQAELALRYADHEYNEGDAPVPASLTGTAWVMPFG
Ga0126379_1373705413300010366Tropical Forest SoilVFLLLGLVVYRAVAANTAVEFDELLQHQAALALRYADHEYDEGDAVVPPASAAPESEAGVPPA
Ga0182024_1171229713300014501PermafrostMAIAIAVAACMVFLILGFLVYRAVASSTAAQFDETLQQQAALALRYADHEYEEGESVVPHPLAAP
Ga0137411_110166133300015052Vadose Zone SoilMAIAVVGAACLVFMILGLLVYRAVATSTARQFDELLQQQAELALRYADHEYREGETVVPASLSNGGQPVQFDVVY
Ga0187821_1050535813300017936Freshwater SedimentMAVAAAAAAGVVFMLLGLLVYRAVTASTAVQFDELLQQQ
Ga0187779_1111118223300017959Tropical PeatlandMAIAAASAACVVFLLLGLLVYRAVAASTAAQFDELLLQQAAVALRYADHEYG
Ga0187776_1007933113300017966Tropical PeatlandMAVAVAAAACAVFVILGVLVYRAVAASTALQFDEMLSQQAA
Ga0210405_1026106633300021171SoilMAIAVAGAACIVFVILGLLVYRAVSSSTTAQFDEMLQQQAVLALRYADHEYGEGETV
Ga0210396_1003688913300021180SoilMAIAAAAAACLVFLILGLLVYRAVASSTAAQFDEMLQQ
Ga0210396_1113150023300021180SoilMALAVAGAACMVFMILGLLVYRAVASSTAAQFDEMLQQQAALALRYAEHEYNEGES
Ga0210383_1079457023300021407SoilMAIAAAAAACLVFLILGLLVYRAVASSTAAQFDEMLQQQAALALRYADHEYAEGDNLVPRSLDAAVQA
Ga0210390_1049752933300021474SoilMALAVAGAACMVFMILGLLVYRAVASSTAAQFDEMLQQQAAL
Ga0210390_1096135813300021474SoilMAIAVAGAACMVFVILGLLVDRAVSSSTAVQFDEMLQQQALLALRYADHEYGEG
Ga0210390_1126857523300021474SoilMAIAVAGAACIVFVILGLLVYRAVSSSTTAQFDEMLQQQAVLALRYADHEY
Ga0210398_1023391233300021477SoilMALAAAAAACLVFLILGLLVYRAVASSTAAQFDEMLQQQAALALRYADHEYDEGESVVPRSLDPAVQA
Ga0126371_1143614313300021560Tropical Forest SoilMAIAVAAAACAVFLLLGLLVYRAVAGNTALQFDQMLQQQADLTLRYAV
Ga0126371_1227223423300021560Tropical Forest SoilMALAAAGAACVVFAILGVLVYRAVASSTAAEFDQMLQQQAALALR
Ga0247693_104130913300024181SoilMAIAVASAACAVFLLLGLVVYRAVAVNTAVEFDELLQQQAALALRYADHEYDEGDAVVP
Ga0247692_103952723300024279SoilMAIAVASAACAVFLLLGLVVYRAVAVNTAVEFDELLQQQAALALRYADHEYDEGDAVVPPPAA
Ga0247670_105703413300024283SoilMAIAVASAACAVFLLLGLVVYRAVAVNTAVEFDELLQQQAALALRYAD
Ga0207685_1029903623300025905Corn, Switchgrass And Miscanthus RhizosphereMAIAVASAACAVFLLLGLVVYRAVAVNTAAEFDELLQQQAALALRYADHEYDEGDAVVPAAPAPE
Ga0207664_1004736013300025929Agricultural SoilMAVAAAAAACVVFMLLGLLVYRAVTASTAVQFAELLQ
Ga0208603_105251423300027109Forest SoilMAIAVAGAACIVFVILGLLVYRAVSSSTTAQFDEMLQQQAVLALRYADHEYGEGETVVPG
Ga0209419_107109523300027537Forest SoilMAIAAAGAACMVFVILGLLVDRAVSSSTAVQFDEMLQQQALLALRYADHEYGEGETVVPSSLATS
Ga0209009_117156313300027667Forest SoilMAIAAAGAACMVFVILGLLVDRAVSSSTAVQFDEMLQQQALLALRYADH
Ga0209167_1004035743300027867Surface SoilMALAVAGAACLVFIVLGVLVYRAVALSTDQQFDELLKQRAILVLRYADHEYNEGDSLVPPAPAREPMETFPFDVVY
Ga0318534_1014683413300031544SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLAL
Ga0318541_1057946623300031545SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLLQQATLALRYADHEYHEGDTVVPASAAPLVMPFDVMC
Ga0318538_1039372213300031546SoilMAIAAASAACVVFLLLGLLVYRAVAASTAVQFDELLQQQASLA
Ga0318571_1018131823300031549SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLLQQA
Ga0310915_1004364813300031573SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADH
Ga0318561_1009392913300031679SoilMAIAAASAACVVFLLLGLLVYRAVAAATSAQFDELLQQQAAVVLRYADHEYGEGEMVVPPAPPQTAPAMP
Ga0318574_10003800103300031680SoilMAIAAAGAACAVFLLLGLLVYRAVAASTAVQFDEMLQQQEH
Ga0307476_1000322113300031715Hardwood Forest SoilMAIAVASAACAVFLLLGLLVYRAVEASTAAEFDELLQQQAALALRYADHEYGEGDAVVPPSPRPVAGVPFDLIYQ
Ga0307476_1064282013300031715Hardwood Forest SoilMAIAVAGAACIVFVILGLLVYRAVSSSTTAQFDEMLQQQAVLALRYADHEYGE
Ga0318500_1002834943300031724SoilMAIAAASAACAVFLLLGVLVYHAVAANTAVQFDELLRQQAALALRY
Ga0318500_1020717123300031724SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGERYR
Ga0318500_1027913523300031724SoilMAIAAAGAACAVFLLLGLLVYRAVAASTAVQFDEMLQQQASLALRYADHEYGERYRIWPERVPIW
Ga0306918_1084415213300031744SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYHEGD
Ga0307477_1024642433300031753Hardwood Forest SoilMAIAVASAACAVFLLLGLLVYRAVEASTAAEFDELLQQQAALALRYADHE
Ga0318537_1018431213300031763SoilMAIAAASAACAVFLLLGVLVYRAVAANTAVQFDELLRQQAALALRYADHEYGEGDEVVPPASAPAMP
Ga0318554_1047229423300031765SoilMAIAVASAACAVFLLLGVVVYRAVAVNTAVEFDELLQHQAALALRYADHEYD
Ga0318526_1000393883300031769SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLLQQATLALRYADHEYHEGDTVVPASAAPLV
Ga0318498_1009156013300031778SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLLQQATLALRYADHEYHEGDTVVPASAAPLVM
Ga0318498_1053878723300031778SoilMAIAAASAACAVFLLLGVLVYRAVAANTAVQFDELLRQQAALALRYADHEYGEGDE
Ga0318566_1020289323300031779SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGERYRT
Ga0318508_111589523300031780SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLLQQATLALRYADHEYHEGDTVVPA
Ga0318547_1095409813300031781SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGEGDTVV
Ga0318552_1018600933300031782SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQ
Ga0318552_1023902513300031782SoilMAIAVASAACAVFLLLGVVVYRAVAVNTAVEFDELLQHQAALALRYADHEYDEGDA
Ga0318529_1016070623300031792SoilMAIAAAGAACAVFLLLGLLVYRAVAASTAVQFDEMLQQQASLALRYADHEYGEGDTVVPPAPAAFPLAMP
Ga0318503_1008154123300031794SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLLQQATLALRYADHEYHEGDTVVPASAAP
Ga0318576_1042346613300031796SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLLQQATLALRYADHEYHEGDTVVPASAAPLVMPFDVMS
Ga0318550_1043504613300031797SoilMAIAAASAACVVFLLLGLLVYRAVAAATSAQFDELLQQQAAV
Ga0318523_1004875043300031798SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGE
Ga0318565_1035290823300031799SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLLQQATLALRYADHEYHEGDTVVPASAAPLVMP
Ga0307478_1085565723300031823Hardwood Forest SoilMALAVAGAAWVVFAVLGLLVYRAVSASTARQFDEMLQQ
Ga0318564_1038495313300031831SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGERYRTWPE
Ga0318517_1021105113300031835SoilMAIAAASAACVVFLLLGLLVYRAVAAATSAQFDELLQQQAAVVLRYADHEYGEGEMVVPPAPPQTAPAMPFDMIY
Ga0318512_1009271213300031846SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGEGDTVVAP
Ga0306919_1009916243300031879SoilMAIAAAGAACAVFLLLGLLVYRAVAASTAVQFDEMLQQQASLAL
Ga0318551_1092111913300031896SoilMAIAAASAACAVFLLLGVLVYRAVAANTAVQFDELLRQQAALALRYADHEYGEGDEVVPPASA
Ga0306921_1198321213300031912SoilMALAVAGAACAVFLLLGVLVYRAVASSTAMQFDELLQQQATLALRYADHEYGEGDTVVPD
Ga0310910_1023858633300031946SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLLQQATLALRYAD
Ga0310910_1065533813300031946SoilMAIAAASAACVVFLLLGLLVYRAVAAATSAQFDELLQQQAAVVLRYAD
Ga0307479_1031854133300031962Hardwood Forest SoilMAIAVAVAACAVFLMLGVLVYRAVAGSTAVQFDEMLQQQAALALRYADHEYGEGETVVPGSLSRTARGAPFDM
Ga0307479_1130566713300031962Hardwood Forest SoilMAIAAASAACVVFVLLGLLVYRAVAASTAAQFDELLQQQAALALRY
Ga0318531_1036847513300031981SoilMAIAAASAACVVFLLLGLLVYRAVAAATSAQFDELLQQQAAVVLR
Ga0306922_1048377633300032001SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQA
Ga0306922_1089076223300032001SoilMALAAAGAACAVFLLLGLLVYRAVAASTAVQFDELLQRQAALALRYADHEYGEGEAVVP
Ga0318562_1009150413300032008SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRY
Ga0318563_1012398713300032009SoilMAIAAASAACAVFLLLGVLVYRAVAANTAVQFDELLRQQA
Ga0318563_1021203923300032009SoilMAIAVASAACAVFLLLGVVVYRAVAVNTAVEFDELLQHQAALALRYADHEYDEGDAVVPPAAAPEGAALGPPAPA
Ga0318559_1003980643300032039SoilMAIAAASAACVVFLLLGLLVYRAVAAATSAQFDELLQQQAAVVLRYADHEYGEGEMVVPPAPPQTAPAMPFD
Ga0318549_1003025913300032041SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEY
Ga0318556_1009633833300032043SoilMAIAAASAACAVFLLLGVLVYRAVAANTAVQFDELLRQQAALALRYADHEYGEGDEVVPPASAPAMPFD
Ga0318506_1004705833300032052SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYA
Ga0318570_1035505613300032054SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGEGDT
Ga0318505_1044668023300032060SoilMAIAVASAACAVFLLLGVVVYRAVAVNTAVEFDELLQHQAALALRYADHEYDEGDAVV
Ga0318504_1003836013300032063SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADLV
Ga0318510_1009279233300032064SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADLVDHIERH
Ga0318513_1002806843300032065SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGEGDTVVPPAQRPG
Ga0318513_1008809633300032065SoilMAIAAAGAACAVFLLLGLLVYRAVAASTAVQFDEMLQQQASLALRYADHEYGEGDTVVPP
Ga0318553_1000431893300032068SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLLQQATLALRYADHEYHEGDTVVPASAAPLVMPFD
Ga0318553_1013776333300032068SoilMAIAAASAACVVFLLLGLLVYRAVAAATSAQFDELLQQQAAVVLRYADHEYGEGE
Ga0318553_1049649013300032068SoilMAIAVASAACAVFLVLGVVVYRAVAVNTAVEFDELLQHQAALALRYADHEYDEGDA
Ga0318577_1005636733300032091SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGEGDTVVPPAPAAA
Ga0335085_1040801633300032770SoilMALAAAAAACVVFMLLGLLVYRAVTASTAVQFGAVGRQQAAL
Ga0335080_1226677223300032828SoilMAVAAAAAACVVFMLLGLLVYRAVTASTAVQFDELLQQQAALALRYAE
Ga0310914_1018050613300033289SoilMAIAAAGAACVVFVLLGLLVYRAVAASTAVQFDELLQQQATLALRYADHEYGEGDTV
Ga0310914_1081061213300033289SoilMAIAAASAACVVFMLLGLLVYRAVAASTAVQFDELLQ
Ga0318519_1006300633300033290SoilMAIAAASAACAVFLLLGVLVYRAVAANTAVQFDELLRQQAALALRYADHEYGEGDEVVPPASAPAMPFDVVYQ


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