Metagenome Family F090925

Basic Information
Family ID	F090925
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	73 residues
Representative Sequence	MKQALFVIAAALILTGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPT
Number of Associated Samples	93
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.16 %
% of genes near scaffold ends (potentially truncated)	91.67 %
% of genes from short scaffolds (< 2000 bps)	84.26 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (58.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (49.074 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.963 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.84% β-sheet: 16.83% Coil/Unstructured: 67.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF13502	AsmA_2	3.70
PF09346	SMI1_KNR4	3.70
PF00106	adh_short	1.85
PF12779	WXXGXW	1.85
PF00072	Response_reg	0.93
PF13414	TPR_11	0.93
PF03743	TrbI	0.93
PF13207	AAA_17	0.93
PF01555	N6_N4_Mtase	0.93
PF00782	DSPc	0.93
PF07676	PD40	0.93
PF01569	PAP2	0.93
PF01019	G_glu_transpept	0.93
PF12706	Lactamase_B_2	0.93
PF00312	Ribosomal_S15	0.93
PF13517	FG-GAP_3	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0184	Ribosomal protein S15P/S13E	Translation, ribosomal structure and biogenesis [J]	0.93
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.93
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.93
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.93
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.93
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.33 %
Unclassified	root	N/A	41.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	45.37 %
Unclassified	root	N/A	41.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.85 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.48 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.93 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.48 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.48 %
unclassified Rhodococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.48 %
Rhodococcus sp. JVH1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. JVH1	0.93 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0815073	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300000156\|NODE_c0732705	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8577	Open in IMG/M
3300000789\|JGI1027J11758_12993220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300001545\|JGI12630J15595_10059273	Not Available	759	Open in IMG/M
3300002915\|JGI25387J43893_1045572	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300004479\|Ga0062595_102018691	Not Available	558	Open in IMG/M
3300005167\|Ga0066672_10321023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300005171\|Ga0066677_10151732	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300005329\|Ga0070683_100457570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1218	Open in IMG/M
3300005338\|Ga0068868_100864309	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005434\|Ga0070709_11132043	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005435\|Ga0070714_101859120	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300005436\|Ga0070713_100354663	Not Available	1361	Open in IMG/M
3300005436\|Ga0070713_102331212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → unclassified Rhodococcus → Rhodococcus sp. JVH1	518	Open in IMG/M
3300005437\|Ga0070710_10099973	All Organisms → cellular organisms → Bacteria → Acidobacteria	1725	Open in IMG/M
3300005437\|Ga0070710_11160843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300005458\|Ga0070681_10774659	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300005468\|Ga0070707_101541732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300005468\|Ga0070707_102036379	Not Available	542	Open in IMG/M
3300005471\|Ga0070698_101836818	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005536\|Ga0070697_100444824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300005543\|Ga0070672_101581833	Not Available	588	Open in IMG/M
3300005546\|Ga0070696_101092107	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300005548\|Ga0070665_100323640	Not Available	1546	Open in IMG/M
3300005555\|Ga0066692_10570733	Not Available	713	Open in IMG/M
3300005558\|Ga0066698_10644128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300005569\|Ga0066705_10476616	Not Available	782	Open in IMG/M
3300006031\|Ga0066651_10705362	Not Available	542	Open in IMG/M
3300006163\|Ga0070715_10359507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300006173\|Ga0070716_100816665	Not Available	723	Open in IMG/M
3300006237\|Ga0097621_100914889	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300006804\|Ga0079221_10164706	All Organisms → cellular organisms → Bacteria → Acidobacteria	1176	Open in IMG/M
3300006881\|Ga0068865_100746663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300006881\|Ga0068865_101214003	Not Available	668	Open in IMG/M
3300007788\|Ga0099795_10658325	Not Available	501	Open in IMG/M
3300009038\|Ga0099829_10967651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300009089\|Ga0099828_10052473	All Organisms → cellular organisms → Bacteria → Acidobacteria	3389	Open in IMG/M
3300009089\|Ga0099828_10075691	Not Available	2861	Open in IMG/M
3300009090\|Ga0099827_10802835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300009098\|Ga0105245_10923711	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300009098\|Ga0105245_13034542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300009176\|Ga0105242_10717627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300009176\|Ga0105242_11985143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300009545\|Ga0105237_12526992	Not Available	524	Open in IMG/M
3300010333\|Ga0134080_10654480	Not Available	517	Open in IMG/M
3300010371\|Ga0134125_11373466	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300010396\|Ga0134126_11123279	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300011271\|Ga0137393_11093703	Not Available	678	Open in IMG/M
3300012096\|Ga0137389_10018483	All Organisms → cellular organisms → Bacteria → Acidobacteria	4850	Open in IMG/M
3300012189\|Ga0137388_10870275	Not Available	834	Open in IMG/M
3300012189\|Ga0137388_11372806	Not Available	646	Open in IMG/M
3300012201\|Ga0137365_10390541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1027	Open in IMG/M
3300012205\|Ga0137362_10452405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300012208\|Ga0137376_10517551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1035	Open in IMG/M
3300012359\|Ga0137385_10756344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300012363\|Ga0137390_11501587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300012363\|Ga0137390_11732807	Not Available	558	Open in IMG/M
3300012469\|Ga0150984_118792001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2101	Open in IMG/M
3300012917\|Ga0137395_10192437	Not Available	1416	Open in IMG/M
3300012922\|Ga0137394_10653713	Not Available	887	Open in IMG/M
3300012923\|Ga0137359_10567483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300012923\|Ga0137359_11005394	Not Available	716	Open in IMG/M
3300012927\|Ga0137416_10668702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300012987\|Ga0164307_11453183	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012987\|Ga0164307_11643328	Not Available	544	Open in IMG/M
3300013100\|Ga0157373_11377667	Not Available	536	Open in IMG/M
3300013297\|Ga0157378_10381090	Not Available	1385	Open in IMG/M
3300013297\|Ga0157378_10980908	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300013306\|Ga0163162_13131705	Not Available	531	Open in IMG/M
3300015241\|Ga0137418_11281242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300018468\|Ga0066662_10838913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300019870\|Ga0193746_1030389	Not Available	551	Open in IMG/M
3300020582\|Ga0210395_10539223	Not Available	877	Open in IMG/M
3300021046\|Ga0215015_10210516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300021086\|Ga0179596_10722818	Not Available	504	Open in IMG/M
3300021180\|Ga0210396_10697679	Not Available	877	Open in IMG/M
3300021478\|Ga0210402_10181292	All Organisms → cellular organisms → Bacteria → Acidobacteria	1930	Open in IMG/M
3300021559\|Ga0210409_10145950	All Organisms → cellular organisms → Bacteria → Acidobacteria	2169	Open in IMG/M
3300025905\|Ga0207685_10665096	Not Available	564	Open in IMG/M
3300025928\|Ga0207700_11811740	Not Available	536	Open in IMG/M
3300025938\|Ga0207704_11425050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300025941\|Ga0207711_11278150	Not Available	676	Open in IMG/M
3300025944\|Ga0207661_10287116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1472	Open in IMG/M
3300026023\|Ga0207677_10609346	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300026023\|Ga0207677_10918073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300026142\|Ga0207698_10449619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1243	Open in IMG/M
3300026316\|Ga0209155_1012883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3624	Open in IMG/M
3300026326\|Ga0209801_1024794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2899	Open in IMG/M
3300026360\|Ga0257173_1051072	Not Available	586	Open in IMG/M
3300026528\|Ga0209378_1153386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300026529\|Ga0209806_1225211	Not Available	637	Open in IMG/M
3300027821\|Ga0209811_10187741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300027846\|Ga0209180_10007917	All Organisms → cellular organisms → Bacteria → Acidobacteria	5432	Open in IMG/M
3300027875\|Ga0209283_10585319	Not Available	709	Open in IMG/M
3300027875\|Ga0209283_10805680	Not Available	577	Open in IMG/M
3300027882\|Ga0209590_10444815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300028536\|Ga0137415_10165763	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300031720\|Ga0307469_11802351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300032180\|Ga0307471_100353901	All Organisms → cellular organisms → Bacteria → Acidobacteria	1580	Open in IMG/M
3300032205\|Ga0307472_102086663	Not Available	570	Open in IMG/M
3300032783\|Ga0335079_10636667	Not Available	1121	Open in IMG/M
3300032897\|Ga0335071_10064749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.70%
Host-Associated	Host-Associated	20.37%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.70%
Plants	Host-Associated → Plants	20.37%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Roots	Host-Associated → Plants → Roots	0.93%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.56%
Loam	Environmental → Terrestrial → Soil → Loam	20.37%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_08150731	2228664022	Soil	MKYMLYLVAAAVVGLMGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELAQVDGLSWKTSPTSTGTAAATIG
NODE_07327058	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MKHLAVLLLAAVGLIACGAGHANLKSITVSPESATASSNQGQVGYTATGNFANGKSRELSQVDGLSWKTSPTSTGGVAAT
JGI1027J11758_129932202	3300000789	Soil	MRYSLFVLMAALFLVSCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFANGKSRELSQVDGLSWK
JGI12630J15595_100592732	3300001545	Forest Soil	MKYLLFLFLGVALVGCGAGHPNLTSITVSPQSATTTSNPQGQVGYTAMGNFSNHTSRELSQVDGLSWKTSPTMSGATAATIGS
JGI25387J43893_10455721	3300002915	Grasslands Soil	MRYWLFLVVAIVALVGCGAGHANLTSITVSPQSATSTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSP
Ga0062595_1020186912	3300004479	Soil	MKQVLFVLATALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSR
Ga0066672_103210233	3300005167	Soil	MKYMLFLVMAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQ
Ga0066677_101517323	3300005171	Soil	MKYVSFLVVAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSPTSTGTVA
Ga0070683_1004575702	3300005329	Corn Rhizosphere	MRYLNSVLALLVATVGIACGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFANGKSRELSQVDGLSWKTSQTSTGT
Ga0068868_1008643091	3300005338	Miscanthus Rhizosphere	MKQALLISLAVAFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAMGNFQNGKSRE
Ga0070709_111320431	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKYLLFLVMAALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSLTST
Ga0070714_1018591202	3300005435	Agricultural Soil	MKYMLYLVAAAVVGLMGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSPTSTGTAAA
Ga0070713_1003546631	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGCALIGCGAGHANLTSITVSPQTATTTSSPEGQVGYTATGHFANGKSRELSQVDGLSWKTSPTNS
Ga0070713_1023312121	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKQMLFVLASALILAGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDG
Ga0070710_100999733	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MCLMKQVLFVLAFALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWK
Ga0070710_111608431	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKHSALLLLLAAVGFIGCGAGHANLTSISVSPQSATAPSDQGEVGYIATGNFANGKSRDLSQADGLSWKTSPTSTGTQAATIGS
Ga0070681_107746591	3300005458	Corn Rhizosphere	MKQALLISLVVTFLMGCGAGHSDLMSITVSPQSATATSSPQGQVGYSAMGNFQNGKSRELSQVDGLSWK
Ga0070707_1015417322	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSLLALVALVGCGAGHANLTSIMVSPQSATTTSNPQGQVGYTATGRFANGKSRSLSQVDGLSWKT
Ga0070707_1020363791	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKYVQLVWAALAALALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTAMGNFSNHTSRELSQVDGLSW
Ga0070698_1018368181	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKYMLYLVAAAVVGLMGCGAGHANLTSITVSPQSATTTSNPRGQVGYTATGNFANGKSRELSQVDGLSWKTPPTSTGTAAATIGSTG
Ga0070697_1004448243	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKQQVLFVLASALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTSTGTVAATIGST
Ga0070672_1015818331	3300005543	Miscanthus Rhizosphere	MKQALLISLAVAFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAMGNFQNGKSRELSQVDGLSWKT
Ga0070696_1010921071	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKQTLFILLALTFLIGCGAGHSNLTSITVSPQTATTTSSPQGQVGYTAMGNFQNGKSRELSQ
Ga0070665_1003236401	3300005548	Switchgrass Rhizosphere	MKQALLISLAVAFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAMGNFQNGK
Ga0066692_105707331	3300005555	Soil	MKQVLFVLASALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQ
Ga0066698_106441282	3300005558	Soil	MKYLLFLVVAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSPTST
Ga0066705_104766161	3300005569	Soil	MKYLVFLFVGALTLIGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPT
Ga0068863_1021713671	3300005841	Switchgrass Rhizosphere	MRYLNSVLALLAATVGIACGAGHANLTSITVSPHSATTTSSPQGQVGYSATGNFANGKSRELSQVDGLSWK
Ga0066651_107053622	3300006031	Soil	MKYLLFLVVAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFADGKSRELSQVDGLSWKTSPTS
Ga0070715_103595072	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKQVLFVLTSALILAGCGAGHANLTSIAVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTSTGRGHYRFNR*
Ga0070716_1008166652	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKEAVFVSVAALILIGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGK
Ga0070716_1012971401	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKHLNFALAFLLSMVVLGCGAGHANLTSVTVSPESATTTSNPQGQVGYTATGHFANGKSRELSQVDGL
Ga0097621_1009148891	3300006237	Miscanthus Rhizosphere	MKQALLISLVVTFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAMGNFQNGKSRE
Ga0079221_101647061	3300006804	Agricultural Soil	MKQVLFVLAFALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTSTGT
Ga0068865_1007466632	3300006881	Miscanthus Rhizosphere	MKHLNFALAFLLSIVVLGCGAGHANLTSVTVSPESATTTSNPQGQVGYTATGHFANGKSRELSQVDGLSWKTSQTDAGGVAATIGATGEVTCSAPG
Ga0068865_1012140031	3300006881	Miscanthus Rhizosphere	MKQALLISLAVAFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAMGNFQNGKSRELSQVDGLSWK
Ga0099795_106583252	3300007788	Vadose Zone Soil	MKSSLFLLLAGVALVACGAGHANITSITVSPQSATATSNQGQVGYTATGNFANGKSRELSQLDGLSWK
Ga0099829_109676511	3300009038	Vadose Zone Soil	MKQALFVIAAALILTACGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTSTGTV
Ga0099828_100524731	3300009089	Vadose Zone Soil	MKQALFVIAAALILTACGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPT
Ga0099828_100756911	3300009089	Vadose Zone Soil	MKQALFVIAAALILTGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTST
Ga0099827_108028351	3300009090	Vadose Zone Soil	MKQALFVIAAALILTACGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTSTGTVA
Ga0105245_109237112	3300009098	Miscanthus Rhizosphere	MKQALLISLVVTFLMGCGAGHSDLMSITVSPQSATATSSPQGQVGYSAMGNFQNGKSRELSQVDGLSWKT
Ga0105245_130345422	3300009098	Miscanthus Rhizosphere	MKYLNLVLALLISVAVIGCGAGHANLTSITVSPESATTTSSPQGQVGYTATGHFSNGKSRELSQVDGLSWKTSQTSTGTVAATIGST
Ga0105242_107176271	3300009176	Miscanthus Rhizosphere	MRYLNSVLALLVATVGIACGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFANGKSRELSQVDGLSWKT
Ga0105242_119851431	3300009176	Miscanthus Rhizosphere	MKQAFLILLAVIFVIGCGAGHSNLTSITVSPQSATTTSSPQGQVGYTAMGNFQNGKSRELSQVDGLSWKTSPTSTGGVAATIGSTGEVTCSAPG
Ga0105237_125269921	3300009545	Corn Rhizosphere	MKQAFLILLAVIFVIGCGAGHSNLTSITVSPQSATTTSSPQGQVGYTAMGNFQNGK
Ga0134080_106544801	3300010333	Grasslands Soil	MKYLLFLVVAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSPT
Ga0134125_113734662	3300010371	Terrestrial Soil	MKQVLFVLATALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTSTGTVA
Ga0134126_111232792	3300010396	Terrestrial Soil	MKQVLFVLATALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQ
Ga0137393_110937031	3300011271	Vadose Zone Soil	MKQALFVIAAALILTACGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTS
Ga0137389_100184831	3300012096	Vadose Zone Soil	MKQALFVIAAALILTGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSLEL
Ga0137388_108702751	3300012189	Vadose Zone Soil	MKQALFVIAAALILTACGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTST
Ga0137388_113728062	3300012189	Vadose Zone Soil	MKQVFVLMAALILIGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKRRELSQVDGLSWKTSPTSTGTVAATIGSTGEVTCSA
Ga0137365_103905413	3300012201	Vadose Zone Soil	MKQALFVSVAALILIGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTS
Ga0137362_104524051	3300012205	Vadose Zone Soil	MKYLLFLVVAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSPTSTGAVAAIIGSTGEATCSAAGTV
Ga0137376_105175511	3300012208	Vadose Zone Soil	MKQALFVSVAALILIGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTST
Ga0137385_107563442	3300012359	Vadose Zone Soil	MKYLLFLVVAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSPTSTGTVAAT
Ga0137390_115015871	3300012363	Vadose Zone Soil	MKYILCLVAAVVVVLVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLS
Ga0137390_117328071	3300012363	Vadose Zone Soil	MKQVLFALASALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQ
Ga0150984_1187920011	3300012469	Avena Fatua Rhizosphere	IYFVIFSGVLLLGCGAGHSNLTSITVSPQSATTTSNPQGQVGYTATGHFANGKSRELSQVDGLSWKTSQTSTGGVAATIGLNR*
Ga0137395_101924374	3300012917	Vadose Zone Soil	MKQALFVIAAALILTGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPT
Ga0137394_106537131	3300012922	Vadose Zone Soil	MKQALFVIAAALILTGCGAGHANLTSIAVSPQSATTTSSPQGQVGYTATGNFQNGKSREISQV
Ga0137359_105674832	3300012923	Vadose Zone Soil	MKQQVLFVLASALILVSCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTSTGTVAATIGST
Ga0137359_110053941	3300012923	Vadose Zone Soil	MKQALFVIAAALILTGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTS
Ga0137416_106687021	3300012927	Vadose Zone Soil	MKYTLCILAAVVVVLVGCGAGHANLTSITVSPQSATTAFNQGQVGYTATGNFANGKSRELSQVDGLSWKT
Ga0164301_102150071	3300012960	Soil	MKHAALLLLAVAGLLGCGAGHANLKSISVSPQTATASSNQGLDESTTTGNFANGKSRELS
Ga0164307_114531832	3300012987	Soil	MKYLNLVLALLISVAVIGCGAGHANLNSITVSPETATTTSSPQGQVGYTATGHFSNGKSRELSQVDGLSWKTSQTSTG
Ga0164307_116433282	3300012987	Soil	MKYVNFVLAMSVLMVLIGCGAGHANITSITVSPQSATTTSTPQGQVGYTATGNFANGKSRELSQVDGLSWKTSQ
Ga0157373_113776672	3300013100	Corn Rhizosphere	MKQALLISLAVAFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAMGNFQNGKSRELSQVDGLSWKTSPTATV
Ga0157378_103810901	3300013297	Miscanthus Rhizosphere	MKQALLISLVVTFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAMGNFQNGKS
Ga0157378_109809082	3300013297	Miscanthus Rhizosphere	MKQALLISLAVAFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAMGNFQNGKS
Ga0163162_131317051	3300013306	Switchgrass Rhizosphere	MKHLNVVLAFLASMVVIGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFANGKSRELSQVDGLSWKTS
Ga0182024_115187271	3300014501	Permafrost	MKPLQFILPVCAALILVGCGAGHPNLTSITVSPTTATADSATHAQVGYTAQGNFANGTNRELSQADGLSWKTSTTAAS
Ga0137418_112812421	3300015241	Vadose Zone Soil	MKYLLFVLMAAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKNRELSQVDGLSWKTSPTSTGT
Ga0066662_108389131	3300018468	Grasslands Soil	MKYLLFLVVAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSPTSTGTVA
Ga0193746_10303891	3300019870	Soil	MKQALLISLAVTFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAM
Ga0210395_105392231	3300020582	Soil	MKYLLFLVVAVVALVGCGAGHANLTSVAVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKT
Ga0215015_102105161	3300021046	Soil	MKYILCLVAAFVVVLVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRALSQVDGLSWKTSPTSTGTV
Ga0179596_107228181	3300021086	Vadose Zone Soil	MKQVLFVFASALILAGCGAGHANLTSIAVSPQSATTTSSPQGQVGYTATGN
Ga0210396_106976791	3300021180	Soil	MKHLMFVVMAALILIGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSRTPSTTS
Ga0210389_102492021	3300021404	Soil	MKPLQFILPICAALILVGCGAGHPNLSSITVSPSTATAESATHGQVGYTAQGNFTNGTSRELSQADGLSWKTSTTAASIG
Ga0210384_109727671	3300021432	Soil	MKPLQFILLAGLALIVIGCGAGHPNLSSVTVSPQTATAPSATHGQVGYTATGHFSNGSSRELSQVDGLSWKTSTTAAS
Ga0210402_101812921	3300021478	Soil	MRYLNCVVALLAAMVVIGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSW
Ga0210409_101459502	3300021559	Soil	MRYLNCVVALLAAMVVIGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSQTSTGTVAATIGPTGE
Ga0207685_106650961	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKHAALLLLAVAGLLGCGAGHANLKSISVSPQTATASSNQGQVEYTATGNFANGKSRELSQVDGLSWKT
Ga0207700_118117401	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKQMLFVLASALILAGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKT
Ga0207704_114250501	3300025938	Miscanthus Rhizosphere	MKQALLISLAVAFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAMGNFQNGKSRELSQVDGLSWKTSPTATGSVAATI
Ga0207711_112781502	3300025941	Switchgrass Rhizosphere	MKQVLFVLATALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGDFQNGKSRELSQVDGLSWKTSPTS
Ga0207661_102871163	3300025944	Corn Rhizosphere	MRYLNSVLALLVATVGIACGAGHANLTSITVSPQSATTTSSPQGQVGYSATGNFANGKSRELSQVDGLSWKTSQTSTGT
Ga0207677_106093462	3300026023	Miscanthus Rhizosphere	MKQALLISLAVAFLMGCGAGHSDLTSITVSPQSATATSSPQGQVGYSAMGNFQNGKSRELSQVDGLSWKTSPTSTGSVAATI
Ga0207677_109180731	3300026023	Miscanthus Rhizosphere	MVVLGCGAGHANLTSVTVSPESATTTSNPQGQVGYTATGHFANGKSRELSQVDGLSWKTSQTDTGGVAATIG
Ga0207698_104496192	3300026142	Corn Rhizosphere	MRYLNSVLALLAATVGIACGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFANGKSRELSQVDGLSWKT
Ga0209155_10128833	3300026316	Soil	MKYLLFLVVAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDG
Ga0209801_10247941	3300026326	Soil	MKYLLFLVVAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSC
Ga0257173_10510722	3300026360	Soil	MKQVLFVLASALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDG
Ga0209378_11533862	3300026528	Soil	MKYLLFLVVAVVALVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSPTSTGTVAATIGSTG
Ga0209806_12252111	3300026529	Soil	MKYSMSFVLALGALLLCALIGCGAGHANLTSITVSPQTATTTSSPKGQVGYTATGHFANGKSRELSQVDGLSWKTSPTS
Ga0209811_101877412	3300027821	Surface Soil	MKYVNFVLAMAVSMVLIGCGAGHANITSITVSPQSATTTSSPQGQVGYTATGNFANGKSRELSQVDGLTWKTSPTSTGQLQLRSVRLAK
Ga0209180_1000791710	3300027846	Vadose Zone Soil	MKQALFVIAAALILTGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTSTGTVAATIGST
Ga0209283_105853191	3300027875	Vadose Zone Soil	MKQALFVIAAALILTACGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSP
Ga0209283_108056802	3300027875	Vadose Zone Soil	MKQVLFVLASALILVGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWK
Ga0209590_104448151	3300027882	Vadose Zone Soil	MKQALFVIAAALILTGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFQNGKSRELSQVDGLSWKTSPTSTGTVA
Ga0137415_101657631	3300028536	Vadose Zone Soil	MKYILFLLVAVVVVLVGCGAGHANLTSITVSPQSATTTSNPQGQVGYTATGNFANGKSRELSQVDGLSWKTSPTSTG
Ga0307469_118023511	3300031720	Hardwood Forest Soil	MRHVNVILALLVAMVAIGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFANGKSRELSQVDGLSWKTSQTSTGTVAATI
Ga0307471_1003539011	3300032180	Hardwood Forest Soil	MKQACLILLAVIFVIGCGAGHSNLTSITVSPQSATTTSSPQGQVGYTAMGNFQNGKSRELSQVDGLSWKTSPTSTG
Ga0307472_1020866631	3300032205	Hardwood Forest Soil	MKYLNSFFALLVAMVGIGCGAGHANLTSITVSPQSATTTSSPQGQVGYTATGNFANGKSRELSQVDGLS
Ga0335079_106366672	3300032783	Soil	MKYSAILLVGSVVGFLGCGAGHANLVSISVSPQSAMATSAQGQVGYTATGNFANGKSRELNQADGLTWKTSPTSSG
Ga0335071_100647491	3300032897	Soil	MKISGLLLLAAAVGLAGCGAGHANLTSITVSPQTATAASANGQVGYTATGNFANGKSRELSQADGLSWKTSP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090925

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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