Metagenome / Metatranscriptome Family F090923

Basic Information
Family ID	F090923
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	64 residues
Representative Sequence	DPQGALHAARQARREAELAGCEMEELAAVLHRKPPVGRWPQLTRASFGPSVAVLSG
Number of Associated Samples	85
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.57 %
% of genes near scaffold ends (potentially truncated)	21.30 %
% of genes from short scaffolds (< 2000 bps)	81.48 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (86.111 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (14.815 % of family members)
Environment Ontology (ENVO)	Unclassified (34.259 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.148 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.57% β-sheet: 0.00% Coil/Unstructured: 46.43%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF02955	GSH-S_ATP	47.22
PF13541	ChlI	23.15
PF00672	HAMP	5.56
PF04964	Flp_Fap	3.70
PF00005	ABC_tran	2.78
PF00528	BPD_transp_1	2.78
PF00015	MCPsignal	1.85
PF03401	TctC	0.93
PF09084	NMT1	0.93
PF02021	UPF0102	0.93
PF17200	sCache_2	0.93
PF00355	Rieske	0.93
PF01503	PRA-PH	0.93
PF02518	HATPase_c	0.93
PF00909	Ammonium_transp	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0189	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	Translation, ribosomal structure and biogenesis [J]	94.44
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	3.70
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	3.70
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.93
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	0.93
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.93
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.04 %
Unclassified	root	N/A	12.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.04 %
Unclassified	root	N/A	12.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.11 %
Unclassified	root	N/A	12.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.56 %
Unclassified	root	N/A	12.96 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	78.70 %
Unclassified	root	N/A	12.96 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.93 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	52.78 %
Unclassified	root	N/A	12.96 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.85 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.93 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	34.26 %
Unclassified	root	N/A	12.96 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.70 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.85 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	1.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.93 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	26.85 %
Unclassified	root	N/A	12.96 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	1.85 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	1.85 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.85 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.85 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	1.85 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	1.85 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.85 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.85 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.93 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.93 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.85 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.85 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.93 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.93 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.85 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.85 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.93 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.93 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.85 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.85 %
Rhabditina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina	0.93 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.93 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.85 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.85 %
Rhabditomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha	0.93 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.93 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.85 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.85 %
Rhabditoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea	0.93 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.93 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.85 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.85 %
Rhabditidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae	0.93 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.93 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.85 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.85 %
Rhabditidae incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis	0.93 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.93 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.85 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.85 %
Diploscapter	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter	0.93 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.93 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	26.85 %
Unclassified	root	N/A	12.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.85 %
Bosea sp. AAP35	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	1.85 %
Diploscapter pachys	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	0.93 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.93 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.93 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.93 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10025997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3281	Open in IMG/M
3300004268\|Ga0066398_10066599	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Rhabditidae incertae sedis → Diploscapter → Diploscapter pachys	768	Open in IMG/M
3300004479\|Ga0062595_102389867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	524	Open in IMG/M
3300004633\|Ga0066395_10059310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1724	Open in IMG/M
3300005332\|Ga0066388_100786293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1546	Open in IMG/M
3300005332\|Ga0066388_101027729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1384	Open in IMG/M
3300005332\|Ga0066388_105652185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	633	Open in IMG/M
3300005332\|Ga0066388_105904766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300005363\|Ga0008090_15818231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1407	Open in IMG/M
3300005434\|Ga0070709_10775920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300005435\|Ga0070714_100609535	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300005435\|Ga0070714_102016235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300005437\|Ga0070710_10290049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1065	Open in IMG/M
3300005437\|Ga0070710_10811949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	669	Open in IMG/M
3300005531\|Ga0070738_10000327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	147186	Open in IMG/M
3300005533\|Ga0070734_10033460	All Organisms → cellular organisms → Bacteria → Proteobacteria	3227	Open in IMG/M
3300005602\|Ga0070762_10520618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300005764\|Ga0066903_100210165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2929	Open in IMG/M
3300005764\|Ga0066903_101372816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1325	Open in IMG/M
3300005764\|Ga0066903_103640474	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005764\|Ga0066903_104984655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	704	Open in IMG/M
3300006028\|Ga0070717_10146063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2043	Open in IMG/M
3300006163\|Ga0070715_10385019	Not Available	775	Open in IMG/M
3300006173\|Ga0070716_100565712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	850	Open in IMG/M
3300006175\|Ga0070712_100713796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	856	Open in IMG/M
3300006755\|Ga0079222_10045907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1994	Open in IMG/M
3300006804\|Ga0079221_10981185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	631	Open in IMG/M
3300006806\|Ga0079220_10222320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1108	Open in IMG/M
3300006806\|Ga0079220_10486990	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300006854\|Ga0075425_100244480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2064	Open in IMG/M
3300006871\|Ga0075434_100932916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300006893\|Ga0073928_10092312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	2561	Open in IMG/M
3300006904\|Ga0075424_100946388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	919	Open in IMG/M
3300006904\|Ga0075424_101056454	Not Available	866	Open in IMG/M
3300006954\|Ga0079219_10171881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1188	Open in IMG/M
3300007076\|Ga0075435_101886786	Not Available	524	Open in IMG/M
3300007788\|Ga0099795_10001257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5382	Open in IMG/M
3300007788\|Ga0099795_10603233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	523	Open in IMG/M
3300009143\|Ga0099792_10434206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	810	Open in IMG/M
3300009162\|Ga0075423_11757859	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300009162\|Ga0075423_11844837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	652	Open in IMG/M
3300009551\|Ga0105238_12882512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300010043\|Ga0126380_11236447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300010047\|Ga0126382_11986558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	553	Open in IMG/M
3300010048\|Ga0126373_10891070	Not Available	953	Open in IMG/M
3300010154\|Ga0127503_10330636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	606	Open in IMG/M
3300010159\|Ga0099796_10001950	All Organisms → cellular organisms → Bacteria	4372	Open in IMG/M
3300010358\|Ga0126370_12380821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	525	Open in IMG/M
3300010359\|Ga0126376_10273833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1451	Open in IMG/M
3300010361\|Ga0126378_13174810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	523	Open in IMG/M
3300010362\|Ga0126377_10897085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300010366\|Ga0126379_12756130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	588	Open in IMG/M
3300010376\|Ga0126381_100720331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1428	Open in IMG/M
3300010376\|Ga0126381_101238620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1078	Open in IMG/M
3300010376\|Ga0126381_103105246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	658	Open in IMG/M
3300010376\|Ga0126381_103317814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	635	Open in IMG/M
3300010376\|Ga0126381_103469438	Not Available	620	Open in IMG/M
3300010880\|Ga0126350_10052200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1339	Open in IMG/M
3300012203\|Ga0137399_10155004	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300012203\|Ga0137399_10476942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	1045	Open in IMG/M
3300012362\|Ga0137361_11187418	Not Available	685	Open in IMG/M
3300012922\|Ga0137394_10796340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	792	Open in IMG/M
3300012923\|Ga0137359_10724750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	865	Open in IMG/M
3300012925\|Ga0137419_10065319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2403	Open in IMG/M
3300015242\|Ga0137412_10019555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5509	Open in IMG/M
3300015372\|Ga0132256_100742561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1098	Open in IMG/M
3300018090\|Ga0187770_10859105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	727	Open in IMG/M
3300020199\|Ga0179592_10163463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1016	Open in IMG/M
3300021170\|Ga0210400_11471870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	541	Open in IMG/M
3300021363\|Ga0193699_10480438	Not Available	509	Open in IMG/M
3300021475\|Ga0210392_11355042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300021560\|Ga0126371_10003296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14099	Open in IMG/M
3300021560\|Ga0126371_10055651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3798	Open in IMG/M
3300021560\|Ga0126371_10191685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2135	Open in IMG/M
3300022557\|Ga0212123_10141087	Not Available	1876	Open in IMG/M
3300025898\|Ga0207692_10288022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. AAP35	996	Open in IMG/M
3300025916\|Ga0207663_11242091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300025928\|Ga0207700_10163628	Not Available	1850	Open in IMG/M
3300025928\|Ga0207700_10209381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1647	Open in IMG/M
3300025939\|Ga0207665_10897573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	703	Open in IMG/M
3300026285\|Ga0209438_1016019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2510	Open in IMG/M
3300026557\|Ga0179587_10117816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1626	Open in IMG/M
3300027313\|Ga0207780_1038082	All Organisms → cellular organisms → Bacteria → Proteobacteria	840	Open in IMG/M
3300027512\|Ga0209179_1000364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4472	Open in IMG/M
3300027516\|Ga0207761_1049113	Not Available	821	Open in IMG/M
3300027684\|Ga0209626_1126730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300027775\|Ga0209177_10025468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1505	Open in IMG/M
3300027787\|Ga0209074_10076998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	1081	Open in IMG/M
3300027826\|Ga0209060_10145857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1098	Open in IMG/M
3300027965\|Ga0209062_1000102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	311526	Open in IMG/M
3300031668\|Ga0318542_10702387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	529	Open in IMG/M
3300031805\|Ga0318497_10755438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	545	Open in IMG/M
3300031823\|Ga0307478_10614063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	910	Open in IMG/M
3300031859\|Ga0318527_10479056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	531	Open in IMG/M
3300031910\|Ga0306923_10960325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	932	Open in IMG/M
3300032205\|Ga0307472_100563536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	997	Open in IMG/M
3300032770\|Ga0335085_10517768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1358	Open in IMG/M
3300032828\|Ga0335080_10665924	Not Available	1088	Open in IMG/M
3300032828\|Ga0335080_11632930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	634	Open in IMG/M
3300032892\|Ga0335081_10000262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	97962	Open in IMG/M
3300032892\|Ga0335081_10143292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3435	Open in IMG/M
3300032893\|Ga0335069_10810648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1054	Open in IMG/M
3300032897\|Ga0335071_10905375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	830	Open in IMG/M
3300033004\|Ga0335084_10429260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1360	Open in IMG/M
3300033004\|Ga0335084_10584004	Not Available	1144	Open in IMG/M
3300033158\|Ga0335077_10475804	Not Available	1326	Open in IMG/M
3300034268\|Ga0372943_0476285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	812	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.67%
Host-Associated	Host-Associated	8.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Plants	Host-Associated → Plants	8.33%
Aquatic	Environmental → Aquatic	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.85%
Freshwater	Environmental → Aquatic → Freshwater	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.93%
Loam	Environmental → Terrestrial → Soil → Loam	27.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.41%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.41%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.56%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.78%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.85%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.93%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090923

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100259971	3300001661	Forest Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQKPPVGRWPQFTRASFGPSVSVLSG*
Ga0066398_100665992	3300004268	Tropical Forest Soil	PRESVQATLHAAQRARLEAELAGCEMEELAAVLHSRPPVGRWPKLTRACFGPSVALLSG*
Ga0062595_1023898672	3300004479	Soil	VTDIEGFQLATPSDPQGALHAARHARIEAELAGCEMEELAAVLHRKPPVGRWPQLTRASFGPSVAVLSG*
Ga0066395_100593102	3300004633	Tropical Forest Soil	MPDSESLSVCVVPDSRGALRAARQARREAELAVCEIEELAAVLHRRPPVGRWPQLTRACFGPSVAVLSG*
Ga0066388_1007862932	3300005332	Tropical Forest Soil	MTGHDNPERPLPTDPQGALRAARQARREAELAGCEMEKLAAVLHRKPPVGRWPLLARASFGPSVAVLSG*
Ga0066388_1010277291	3300005332	Tropical Forest Soil	MADSKALHGALERARQARREAELAGCEMEELAAVLHKKPPVGRWPWLTRASFGPSIAVLSG*
Ga0066388_1056521851	3300005332	Tropical Forest Soil	MTDLDHPEHTSSADPQGALRAARQARLEAQLAGCEMEELAAVLHRKPPVGRWPLLTRACFGPSVAVLSG*
Ga0066388_1059047661	3300005332	Tropical Forest Soil	VTDLERLPAPTPHDPQGTLAAARQARLEAELAGCEMEELAAVLHRKPPVGRWPRLTRAAFGPSVALLSG*
Ga0008090_158182312	3300005363	Tropical Rainforest Soil	MSDSERLPVPAAHDLQAALRAARQARLEAEFAGCEMEDLAAVLHRKPPVGRWPLLARASFGPSIAVLSG*
Ga0070709_107759202	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVDIQGLQGATERTLQAAQQARIEAELAAHETEELAAVLHRKPPVGRWPRLTRASFGPSVSVLSG*
Ga0070714_1006095352	3300005435	Agricultural Soil	MIDRPNFQGALAQARQARAEADLARCELEELAAALQRKPPVGRWLWLTRAGFGPSVAVLSGA*
Ga0070714_1020162351	3300005435	Agricultural Soil	DPQGALHAARQARREAELAGCEMEELAAVLHRKPPVGRWPQLTRASFGPSVAVLSG*
Ga0070710_102900491	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MVDIQGLQGATERTLQAAQQARVEAELAAHETEELAAVLHRKPPVGRWPRLTRASFGPSVSVLSG*
Ga0070710_108119491	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTDLDHPEHAPSTDPQGALRAARRARLEAEVAGCEMEELAAVLHRKPPVGRWPLLTRACFGPSVAVLLG*
Ga0070738_1000032760	3300005531	Surface Soil	MQGALAAARQARIEAELAGCEMEELTAALHRKPPVGRWPRLVQPVFGPTVAVLSG*
Ga0070734_100334603	3300005533	Surface Soil	MSDSEGLPLPAASDPQTALHAARQARAEAELAGCEMEELAAVLHRKPPVGRWPQLTRASFGPSVAVLSG*
Ga0070762_105206181	3300005602	Soil	VLSAAREARIDAELAGCEMEELTAALHRKPPVGRWPQFTRAAFGPSVAVLSG*
Ga0066903_1002101651	3300005764	Tropical Forest Soil	ARREAELAVCEIEELAAVLHRRPPVGRWPQLTRACFGPSVAVLSG*
Ga0066903_1013728162	3300005764	Tropical Forest Soil	MTGHDNPERPLPTDPQGALRAARQARREAELAGCEMEELAAVLHRKPPVGRWPLLARACFGPSVAVLSG*
Ga0066903_1036404742	3300005764	Tropical Forest Soil	MSDSERLPVNAPQGLAAPDLAAHDAQAALHAARQARREAELAGCEMEDLAAVLHRKPPVGRWPQLTRAAFGPSIAVLSG*
Ga0066903_1049846552	3300005764	Tropical Forest Soil	MADLDTLEHLPSTDPQGALRAARQARREAELAGCEMEELAAVLHRKPPVGRWPLLARACFGPSVAVLSG*
Ga0070717_101460631	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MVDTQGLQGATARTLQAAQQARVEAELAAHETEELAAVLHRKPPVGRWPRLTRASFGPSVSVLSG*
Ga0070715_103850192	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MIDIQGLQGATQNALQAAQQARIAAQLAACETEELAAVLHRKPPVGRWPRLTRASFGPSVAVMSG*
Ga0070716_1005657122	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MVDIQGLQGALQAAQQARIAAQLAACETEELAAVLHQKPPVGRWLQFTRASFGPSVSVLSG*
Ga0070712_1007137961	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVDIQGLQGATERTLQAAQQARIEAELAAHETEELAAVLHRKPPVGRWPRLTRASFGPSVAVMSG*
Ga0079222_100459074	3300006755	Agricultural Soil	MIDHPNFHGALAQARQARAEADLARCELEELAAALQRKPPVGRWTRLTRAGFGPSVAVLSGA*
Ga0079221_109811852	3300006804	Agricultural Soil	VVDPTSLSVHAADDSQAALQAARQARRDAELAVCEVEELAAVLHRKPPVGRWPRLTRASFGPSVAVLSG*
Ga0079220_102223203	3300006806	Agricultural Soil	KPPAGPNPDAGPSMIDHPNFHGALAQARQARAEADLARCELEELAAALQRKPPVGRWTRLTRAGFGPSVAVLSGA*
Ga0079220_104869902	3300006806	Agricultural Soil	MIDRLNFQGALAQARQARAEADLARCELEELAAVLQRKPPVGRWPWLTRAGFGPSVAVLSGA*
Ga0075425_1002444801	3300006854	Populus Rhizosphere	MTDLDHPEHAPSTDPQGALRAARRARLEAEVAGCEMEELAAVLHRKPPVGRWPLLTRACFGPSVAVLSG*
Ga0075434_1009329161	3300006871	Populus Rhizosphere	PNFHGALAQARQARAEADLARCELEELAAALQRKPPVGRWTRLTRAGFGPSVAVLSGA*
Ga0073928_100923123	3300006893	Iron-Sulfur Acid Spring	MADQVTDQVTDQATDIEEFRGSVSTAPAISALRAARQARREAELAGCEMEELTAALHSKPPVGRWPQLARASFGPSVAVLSG*
Ga0075424_1009463881	3300006904	Populus Rhizosphere	VTDLERLPASAARDPQGALAAARQARLEAELAGCEMEELAAVLHRKPPVGRWPRLTRASFGPSVAVLSG*
Ga0075424_1010564541	3300006904	Populus Rhizosphere	MTDLDHPEHAPSTSPQGALRAARRARLEAEVAGCEMEELAAVLHRKPPVGRWPLLTRACFGPSVAVLSG*
Ga0079219_101718812	3300006954	Agricultural Soil	MTNLDHPEHAPSTDPQGALRAARQARFEAELAGCEMEELAAVLHRKPPVGRWPLLTRACFGPSVAVLSG*
Ga0075435_1018867861	3300007076	Populus Rhizosphere	ERLPASAARDPQGALAAARQARLEAELAGCEMEELAAVLHRKPPVGRWPRLTRASFGPSVAVLSG*
Ga0099795_100012572	3300007788	Vadose Zone Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQKPPVGRWPQLTRASFGPSVSVLSG*
Ga0099795_106032331	3300007788	Vadose Zone Soil	VIDSQGLQGALQAAQQARIEAQLAACETEELAAVLHQRPPVGRWLQFTRASFGPSVSVLSG*
Ga0099792_104342062	3300009143	Vadose Zone Soil	VIDIKGLPGALQAAQQARIAAQLAACETEELAAVLHQRPPVGRWLQFTRASFGPSVSVLSG*
Ga0075423_117578591	3300009162	Populus Rhizosphere	HGALAQARQARAEADLARCELEELAAALQRKPPVGRWTRLTRAGFGPSVAVLSGA*
Ga0075423_118448372	3300009162	Populus Rhizosphere	VTDLEGLPTPAPYDPQSALAAARQARLEAELAGCEMEELAAVLHRKPPVGRWPRLTRASFGPSVAVLSG*
Ga0105238_128825121	3300009551	Corn Rhizosphere	MSDSERLPVSAAHDPQSALHAARQARREAELAGCEMEDLAAVLHRKPLVGRWPKLTRASFGPS
Ga0126380_112364472	3300010043	Tropical Forest Soil	MPDSERLPVSVAHDPQATLNAARQARRDAELAGCEMEDLAAVLHRKPPVGRWPQLTRASFGPSVAVLAG*
Ga0126382_119865582	3300010047	Tropical Forest Soil	AWHDPQGALRAARQARHEAELAGCEMEELAAVLHRKPPVGRWPLLTRACFGPSVAVLSG*
Ga0126373_108910702	3300010048	Tropical Forest Soil	MADSKELRGALERARQARLEAELAGCEMEELAAVLHKKPPVGRWPWLTRASFGPSIAVLSG*
Ga0127503_103306362	3300010154	Soil	DRQMIDIQGLQGATQSALQAAQQARIAAQLAACETEELAAVLHRKPPVGRWPRLTRASFGPSVSVLSG*
Ga0099796_100019501	3300010159	Vadose Zone Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQKPPVGRWLQFTQASFGPSVSVLSG*
Ga0126370_123808211	3300010358	Tropical Forest Soil	VTDIERLRGTLREAREARLAAETAGDEMEELATVLQRRPPVGRWPRLTRATFGPTVAVLSA*
Ga0126376_102738332	3300010359	Tropical Forest Soil	LQAARQARRDAERAVCEVEELAAVLHRKPPVGRWPQLTRAAFGPSVAVLSG*
Ga0126378_131748101	3300010361	Tropical Forest Soil	MADSKALHGALEQARQARREAELAGCEMEELAAVLHKKPPVGRWPWLTRASFGPSIAVLSG*
Ga0126377_108970851	3300010362	Tropical Forest Soil	MPDSERLPVPAAHDLQAALHAARQARRDAELAGCEMEDLAAVLHRKPPVGRWPQLTRASFGPSVAVLSG*
Ga0126379_127561302	3300010366	Tropical Forest Soil	MTDVEFTHGAPHGDLRGALQAARQARLEAELAGCEMEELAAVLHRKPPVGRWPQLTRASFGPSVAVLSG*
Ga0126381_1007203312	3300010376	Tropical Forest Soil	MPDSKDLRGALERARQARLEAELAGCEMEELAAVLHRKPPVGRWPWLTRATFGPSIAVLSG*
Ga0126381_1012386202	3300010376	Tropical Forest Soil	VTLAAARRARIDAELAGCEIEELAAALHRKPPVGRWTRLVQASFGPSVAVLSG*
Ga0126381_1031052462	3300010376	Tropical Forest Soil	MPDNKDLRGALAQARQARLQAELAGCEMEELAAVLHKKPPVGRWPWLTRASFGPSIAVLSG*
Ga0126381_1033178141	3300010376	Tropical Forest Soil	MTGHDNPERPLPTDPQGALRAARQARREAELAGCEMEELAAVLHRKPPVGRWPLLARASFGPSVAVLSG*
Ga0126381_1034694382	3300010376	Tropical Forest Soil	MTDVEFTHGAPHGDLRGALQAARQARLEAEVAGCEMEELAAVLHRKPPVGRWPQLTRASFGPSVAVLSC*
Ga0126350_100522002	3300010880	Boreal Forest Soil	VADRDAFQGCVAPALPPTGAAGALQAARQARREAELAGCEMEELTAALHSKPPVGRWARLARASFGPSVAVLSG*
Ga0137399_101550041	3300012203	Vadose Zone Soil	VIDIQGLQGALQAAQQARIAAQLAACETEELAAVLHQRPPVGRWLQFTRASFGPSVSVLSG*
Ga0137399_104769422	3300012203	Vadose Zone Soil	AAQQARIEAQLAACETEELAAVLHQKPPVGRWPQLTRASFGPSVSVLSG*
Ga0137361_111874181	3300012362	Vadose Zone Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQRPPVGRWLQFTRASFGPSVSVLSG*
Ga0137394_107963401	3300012922	Vadose Zone Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQKPPVGRWPQLTWASFGPSVSVLSG*
Ga0137359_107247501	3300012923	Vadose Zone Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQKPPVGRWLQFTRASFGPSVSVLSG*
Ga0137419_100653191	3300012925	Vadose Zone Soil	LAACETEELAAVLHQKPPVGRWPQLTRASFGPSVSVLSG*
Ga0137412_100195557	3300015242	Vadose Zone Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQKPPVGRWPQLTRASFGPRLSVLSG*
Ga0132256_1007425612	3300015372	Arabidopsis Rhizosphere	MTDLDHPKPTQSTPSSDLQGALRAARQARLEAELAGCEMEELAAVLHRKPPVGRWPLLARASFGPSVAVLSS*
Ga0187770_108591052	3300018090	Tropical Peatland	MPDCKELRGALQEARQARLEAEMAGCEMEELVANLHKKPPVGRWPWLTRASFGPSIAVLS
Ga0179592_101634632	3300020199	Vadose Zone Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQKPPVGRWLQFTRASFGPSVSVLS
Ga0210400_114718701	3300021170	Soil	VADSDAFQGSIAPVLPSIGAVGALQAARQARREAELAGCEMEELTAALHSKPPVGRWPQLARASFGPSVAVLSG
Ga0193699_104804381	3300021363	Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQRPPVGRWLQFTRASFGPSVSVLS
Ga0210392_113550421	3300021475	Soil	MSDSERLPVPAAHDLQAALQAARQARLDAELAGCEMEDLAAVLHRKPPVGRWPQLTRASFGPSV
Ga0126371_100032962	3300021560	Tropical Forest Soil	MADSKALHGALEQARQARREAELAGCEMEELAAVLHKKPPVGRWPWLTRASFGPSIAVLS
Ga0126371_100556512	3300021560	Tropical Forest Soil	LREAREARLAAETAGDEMEELATVLQRRPPVGRWPRLTRATFGPTVAVLSA
Ga0126371_101916852	3300021560	Tropical Forest Soil	MPDSESLSVCVVPDSRGALRAARQARREAELAVCEIEELAAVLHRRPPVGRWPQLTRACFGPSVAVLSG
Ga0212123_101410872	3300022557	Iron-Sulfur Acid Spring	MADQVTDQVTDQATDIEEFRGSVSTAPAISALRAARQARREAELAGCEMEELTAALHSKPPVGRWPQLARASFGPSVAVLSG
Ga0207692_102880221	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MVDTQGLQGATERTLQAAQQARVEAELAAHETEELAAVLHRKPPVGRWPRLTRASFGPSVSVLSG
Ga0207663_112420912	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MVDTQGLQGATERTLQAAQQARIEAELAAHETEELAAVLHRKPPVGRWPRLTRASFGPSVSVLSG
Ga0207700_101636282	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIDRPNFQGALAQARQARAEADLARCELEELAAALQRKPPVGRWLWLTRAGFGPSVAVLSGA
Ga0207700_102093811	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	QGATERTLQAAQQARIEAELAAHETEELAAVLHRKPPVGRWPRLTRASFGPSVSVLSG
Ga0207665_108975732	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MVDIQGLQGALQAAQQARIAAQLAACETEELAAVLHQKPPVGRWLQFTRASFGPSVSVLS
Ga0209438_10160192	3300026285	Grasslands Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQKPPVGRWPQLTRASFGPSVSVLS
Ga0179587_101178162	3300026557	Vadose Zone Soil	VIDIQGLQGALQAAQQARIAAQLAACETEELAAVLHQRPPVGRWLQFTRASFGPSVSVLS
Ga0207780_10380821	3300027313	Tropical Forest Soil	MPDQKELRGGLEQARQARREAELAGCEMEELAAVLHRKPPVGRWPWLTRASFGPSIAVLS
Ga0209179_10003642	3300027512	Vadose Zone Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQKPPVGRWLQLTRASFGPSVSVLS
Ga0207761_10491132	3300027516	Tropical Forest Soil	MPDQKELRGALEQARQARREAELAGCEMEELAAVLHRKPPVGRWPWLTRASFGPSIAVLS
Ga0209525_10165232	3300027575	Forest Soil	VTDIQGFRLDVCPEAQGALGALAAARQARLEAELAGCEMEELTAALHRKPPVGRWPRLAQAAFGPTIAVLSG
Ga0209626_11267302	3300027684	Forest Soil	MADQATDQATDQTTDIEEFHGSVSTAPATSALQAARQARREAELAGCEMEELTAALHSKPPVGRWPQLARASFGPSVAVLSG
Ga0209177_100254682	3300027775	Agricultural Soil	MTNLDHPEHAPSTDPQGALRAARQARFEAELAGCEMEELAAVLHRKPPVGRWPLLTRACFGPSVAVLSG
Ga0209074_100769982	3300027787	Agricultural Soil	VADPKSLSVHAADDSQGALQAARQARRDAELAVCEVEELAAVLHRKPPVGRWPRLTRASFGPSVAVLSG
Ga0209060_101458572	3300027826	Surface Soil	MSDSEGLPLPAASDPQTALHAARQARAEAELAGCEMEELAAVLHRKPPVGRWPQLTRASFGPS
Ga0209062_100010290	3300027965	Surface Soil	MQGALAAARQARIEAELAGCEMEELTAALHRKPPVGRWPRLVQPVFGPTVAVLSG
Ga0318542_107023871	3300031668	Soil	ARWSRQMTDPEFTHCAPHGDPLGALQAARQARLEAELAGCEMEQLAAVLHRKPPVGRWPQLTRASFGPSVAVLSG
Ga0318497_107554381	3300031805	Soil	MSDSERLPVPAAPDLAAHDPQAALHAARQARREAELAGCEMEDLAAVLHRKPPVGRWPQLTRAAFGPSVAVLSG
Ga0307478_106140632	3300031823	Hardwood Forest Soil	MLQGALAAARQARIEAELAGCEMEELTAALHRKPPVGRWPRLAQAAFGPSVAVLSG
Ga0318527_104790562	3300031859	Soil	MSDSERLPVNATQDLAAHDLAAHDPQAALHAARQARREAELAGCEMEDLAAVLHRKPPVGRWPQLTRASFGPSVAVLSG
Ga0306923_109603252	3300031910	Soil	MTDLEFTHCAPHGDPLGALQAARQARLEAELAGCEMEQLAAVLHRKPPVGRWPQLTRASFGPSVAVLSG
Ga0307472_1005635362	3300032205	Hardwood Forest Soil	AQQARLAAQLAACETEELAALLHRKPPVGRWPRLTRASFGPSVAVMSG
Ga0335085_105177682	3300032770	Soil	MSDSERLPVPAAHDPQGALHAARQARREAELAGCEMEELTAVLHRKPPVGRWPQLTRAAFGPSVAVLSG
Ga0335080_106659241	3300032828	Soil	EAELAGCEMEELAAVLHRKPPVGRWPLLTRACFGPSVAVLSG
Ga0335080_116329302	3300032828	Soil	MTDLDDLKCAPATDPQGTLRAARQARLEAELAGCEMEELAAVLHRKPPVGRWPLLARACFGPSVAVLSG
Ga0335081_1000026213	3300032892	Soil	MAPSGLPGAQGAQEGAHGALAAARQARIEAELAGCEMEELTAALHRKPPVGRWPRLTRAAFGPSVAVLSG
Ga0335081_101432922	3300032892	Soil	MPDSKELRGALEQARQARLEAELAGSEMEELAAVLHKKPPVGRWPWLTRASFGPSIAVLS
Ga0335069_108106482	3300032893	Soil	MTDLAHPQCCSASDPLMTLNAARQARREAELAGCEMEELAAVLHRKPPVGRWPLLTRACFGPSVAVLSG
Ga0335071_109053751	3300032897	Soil	RQARLEAELAGCEMEELAAVLHRKPPVGRWPLLTRARFGPSVAVLSG
Ga0335084_104292602	3300033004	Soil	MSDSERLPVLAAHDLQAALRAARQARVDAELAGCEMEDLAAVLHRKPPVGRWPLLARASFGPSVAVLSG
Ga0335084_105840041	3300033004	Soil	AELAGCEMEELTAVLHRKPPVGRWPQLTRAAFGPSVAVLSG
Ga0335077_104758041	3300033158	Soil	VPAAHDPQGALHAARQARREAELAGCEMEELTAVLHRKPPVGRWPQLTRAAFGPSVAVLS
Ga0372943_0476285_297_482	3300034268	Soil	VIDIQGLQGALQAAQQARIEAQLAACETEELAAVLHQKPPVGRWPQFTRASFGPSVSVLS

Hidden Markov Model


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