NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F090911

Metagenome / Metatranscriptome Family F090911

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F090911
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 128 residues
Representative Sequence MADPKNDSELWMWDGATEYEGIFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLLEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLEILRKMSIENAALLLQRQVS
Number of Associated Samples 87
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 77.78 %
% of genes near scaffold ends (potentially truncated) 27.78 %
% of genes from short scaffolds (< 2000 bps) 82.41 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (68.519 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.593 % of family members)
Environment Ontology (ENVO) Unclassified
(29.630 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(41.667 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 21.02%    β-sheet: 29.30%    Coil/Unstructured: 49.68%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.45.2.1: PilZ domaind3kyga23kyg0.65103
b.45.2.1: PilZ domaind5xlyb_5xly0.61485
b.47.1.0: automated matchesd4ic5a_4ic50.58655
b.47.1.1: Prokaryotic proteasesd5c2za15c2z0.57909
b.47.1.1: Prokaryotic proteasesd1agja_1agj0.57342


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF01052FliMN_C 16.67
PF00498FHA 10.19
PF02154FliM 3.70
PF16697Yop-YscD_cpl 1.85
PF11104PilM_2 1.85
PF05932CesT 0.93
PF07973tRNA_SAD 0.93
PF02569Pantoate_ligase 0.93
PF13946DUF4214 0.93
PF10722YbjN 0.93
PF01872RibD_C 0.93
PF14283DUF4366 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG1868Flagellar motor switch protein FliMCell motility [N] 3.70
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.93
COG0414Panthothenate synthetaseCoenzyme transport and metabolism [H] 0.93
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.93


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A68.52 %
All OrganismsrootAll Organisms31.48 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2065487018|GPINP_F5MS3JC02FZEWYNot Available528Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105423913Not Available1056Open in IMG/M
3300000891|JGI10214J12806_10162118All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_59_81883Open in IMG/M
3300004100|Ga0058904_1327001Not Available673Open in IMG/M
3300004134|Ga0058906_1318419Not Available527Open in IMG/M
3300004139|Ga0058897_10431525Not Available593Open in IMG/M
3300004139|Ga0058897_10578587Not Available877Open in IMG/M
3300004463|Ga0063356_100197193All Organisms → cellular organisms → Bacteria2369Open in IMG/M
3300004463|Ga0063356_103255715Not Available700Open in IMG/M
3300004479|Ga0062595_102201454Not Available540Open in IMG/M
3300005330|Ga0070690_100854318Not Available709Open in IMG/M
3300005340|Ga0070689_100946492Not Available764Open in IMG/M
3300005340|Ga0070689_102185356Not Available507Open in IMG/M
3300005343|Ga0070687_100410508Not Available890Open in IMG/M
3300005364|Ga0070673_101209818Not Available708Open in IMG/M
3300005365|Ga0070688_101599560Not Available532Open in IMG/M
3300005406|Ga0070703_10268197Not Available699Open in IMG/M
3300005468|Ga0070707_102325319Not Available503Open in IMG/M
3300005471|Ga0070698_100675708All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium974Open in IMG/M
3300005518|Ga0070699_101994773Not Available530Open in IMG/M
3300005531|Ga0070738_10168196Not Available1045Open in IMG/M
3300005536|Ga0070697_100140471All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_59_82031Open in IMG/M
3300005537|Ga0070730_10006472All Organisms → cellular organisms → Bacteria10013Open in IMG/M
3300005538|Ga0070731_10005647All Organisms → cellular organisms → Bacteria10236Open in IMG/M
3300005542|Ga0070732_10285909Not Available989Open in IMG/M
3300005549|Ga0070704_100111178All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium2085Open in IMG/M
3300005615|Ga0070702_100872510Not Available702Open in IMG/M
3300005764|Ga0066903_103155752Not Available892Open in IMG/M
3300005764|Ga0066903_106448113Not Available612Open in IMG/M
3300005836|Ga0074470_10962139All Organisms → cellular organisms → Bacteria51138Open in IMG/M
3300006046|Ga0066652_101273145Not Available695Open in IMG/M
3300006163|Ga0070715_10689073Not Available609Open in IMG/M
3300006844|Ga0075428_102095688Not Available585Open in IMG/M
3300006852|Ga0075433_10731346Not Available866Open in IMG/M
3300006854|Ga0075425_102115112Not Available628Open in IMG/M
3300006918|Ga0079216_12008915Not Available502Open in IMG/M
3300009094|Ga0111539_10261148All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium2016Open in IMG/M
3300009100|Ga0075418_11649243Not Available697Open in IMG/M
3300009100|Ga0075418_12515847Not Available562Open in IMG/M
3300009147|Ga0114129_10931373All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300009156|Ga0111538_10086019All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes4000Open in IMG/M
3300009156|Ga0111538_11157444Not Available978Open in IMG/M
3300009651|Ga0105859_1185447Not Available605Open in IMG/M
3300010337|Ga0134062_10249402All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium825Open in IMG/M
3300010397|Ga0134124_11834504Not Available641Open in IMG/M
3300010399|Ga0134127_10032209All Organisms → cellular organisms → Bacteria4201Open in IMG/M
3300010400|Ga0134122_10113066All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_59_82165Open in IMG/M
3300010400|Ga0134122_10425505All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1180Open in IMG/M
3300010400|Ga0134122_10835767Not Available883Open in IMG/M
3300010401|Ga0134121_10057465All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_59_83200Open in IMG/M
3300010403|Ga0134123_10191448All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1732Open in IMG/M
3300010403|Ga0134123_10799437Not Available936Open in IMG/M
3300011120|Ga0150983_11552358Not Available585Open in IMG/M
3300011120|Ga0150983_13031801Not Available634Open in IMG/M
3300011120|Ga0150983_16269303Not Available928Open in IMG/M
3300011421|Ga0137462_1177970Not Available526Open in IMG/M
3300012469|Ga0150984_111543773Not Available591Open in IMG/M
3300012902|Ga0157291_10378904Not Available517Open in IMG/M
3300012903|Ga0157289_10319888Not Available556Open in IMG/M
3300012944|Ga0137410_10005626All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium8527Open in IMG/M
3300012971|Ga0126369_12610324Not Available590Open in IMG/M
3300014166|Ga0134079_10062035All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1343Open in IMG/M
3300015374|Ga0132255_104974632Not Available563Open in IMG/M
3300016357|Ga0182032_11046268Not Available699Open in IMG/M
3300018482|Ga0066669_11611907Not Available593Open in IMG/M
3300019362|Ga0173479_10406182Not Available659Open in IMG/M
3300019882|Ga0193713_1113785Not Available748Open in IMG/M
3300020202|Ga0196964_10445830Not Available628Open in IMG/M
3300021384|Ga0213876_10073702All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_59_81803Open in IMG/M
3300022533|Ga0242662_10298304Not Available537Open in IMG/M
3300027857|Ga0209166_10004452All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium9781Open in IMG/M
3300027869|Ga0209579_10003294All Organisms → cellular organisms → Bacteria11840Open in IMG/M
3300027869|Ga0209579_10187758Not Available1106Open in IMG/M
3300027886|Ga0209486_10647889Not Available675Open in IMG/M
3300027907|Ga0207428_11131912Not Available546Open in IMG/M
3300030582|Ga0210261_1029630Not Available913Open in IMG/M
3300030740|Ga0265460_10610470All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_59_8894Open in IMG/M
3300030990|Ga0308178_1076305Not Available674Open in IMG/M
3300030997|Ga0073997_11029997Not Available762Open in IMG/M
3300031047|Ga0073995_10932085Not Available577Open in IMG/M
3300031093|Ga0308197_10111970Not Available825Open in IMG/M
3300031421|Ga0308194_10111679Not Available800Open in IMG/M
3300031716|Ga0310813_10000062All Organisms → cellular organisms → Bacteria77914Open in IMG/M
3300031716|Ga0310813_10008678All Organisms → cellular organisms → Bacteria6490Open in IMG/M
3300031716|Ga0310813_10028313All Organisms → cellular organisms → Bacteria3931Open in IMG/M
3300031716|Ga0310813_10139402All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1938Open in IMG/M
3300031716|Ga0310813_10479711All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300031716|Ga0310813_10808204Not Available844Open in IMG/M
3300031754|Ga0307475_10660409Not Available835Open in IMG/M
3300031912|Ga0306921_10471029All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_59_81462Open in IMG/M
3300031941|Ga0310912_11133698Not Available597Open in IMG/M
3300031954|Ga0306926_12696561Not Available540Open in IMG/M
3300031962|Ga0307479_10193457All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium RBG_16_59_82002Open in IMG/M
3300032001|Ga0306922_11370865Not Available712Open in IMG/M
3300032059|Ga0318533_11287731Not Available534Open in IMG/M
3300032157|Ga0315912_10924630Not Available693Open in IMG/M
3300032163|Ga0315281_10194259All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium2266Open in IMG/M
3300032421|Ga0310812_10031073All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1958Open in IMG/M
3300032421|Ga0310812_10216682Not Available834Open in IMG/M
3300032421|Ga0310812_10217617All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium833Open in IMG/M
3300033412|Ga0310810_10480377All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300033803|Ga0314862_0178841Not Available524Open in IMG/M
3300034644|Ga0370548_090258Not Available607Open in IMG/M
3300034661|Ga0314782_131314Not Available597Open in IMG/M
3300034661|Ga0314782_213817Not Available506Open in IMG/M
3300034661|Ga0314782_215683Not Available504Open in IMG/M
3300034662|Ga0314783_140595Not Available550Open in IMG/M
3300034819|Ga0373958_0175749Not Available549Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.59%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.26%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil7.41%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.41%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil6.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.48%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.48%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.85%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.85%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.93%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.93%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.93%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.93%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.93%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.93%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.93%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2065487018Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300004100Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004134Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF248 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004139Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005531Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009651Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011421Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300030582Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE022SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030997Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031047Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033803Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034662Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPINP_035316102065487018SoilMADPKNEAELWMWDGATEYEGIFIKLDGEAFSARVRQARRSGASLGKRMAPSSMDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQGCGDGPYEFLLSGRFAKLDEKQLALLRKMSVRTRPSCSSAGL
INPhiseqgaiiFebDRAFT_10542391313300000364SoilMAEQRNDSELWMWDGATEYEGIFIKLDGAEFSARLRQVRRPGTTLGKRVATSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQVDSVQICTNGEHDYLISGKFSKLDAKQMELLKKMSVENAALLLQRQVS*
JGI10214J12806_1016211823300000891SoilMADVKNDSELWMWDGATEYEGIFVKMDGAAFSARIRPVRRGGTTLGKRVNTSSVDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQVCTGAEHDFLVSGKFAKLDEKQLEMLRKMSVENAALLLQRQVS*
Ga0058904_132700113300004100Forest SoilMADPKNDAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRIAPSSLDLHRVFTQRRFLAHFTGSMDGMLLEAHIEGVQACSDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALMLQRQVS*
Ga0058906_131841913300004134Forest SoilMADPKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRISPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACSDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALMLQRQVS*
Ga0058897_1043152513300004139Forest SoilMADSKNEAELWLWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRISPSSLDLHRVFTQRRFLAHFTGSIDGTLLEAHIEGVQACNDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALLLQRQVS*
Ga0058897_1057858723300004139Forest SoilMADPRNDSELWMWDGATEYEGIFVKLDGAVFSARVRQARRAGTSLGKRLAPSSLDLNRMFTQRRFLAHFKGSLDGTLLEAQIDGVQASSDADHDFLLSGRFSKLDERQLEMLRKMSVENAALLLQRHAS*
Ga0063356_10019719323300004463Arabidopsis Thaliana RhizosphereMAEQKNDSELWMWDGATEYEGIFVKLDGATFSARLRQVRRGGSGTTLIGKRVASSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQACHNGEHEYLVSGRFSKLDESQLELLRKMSIENAAILLQRQVS*
Ga0063356_10325571513300004463Arabidopsis Thaliana RhizosphereMWDGATEYEGIFVKLDGADFAARVRQAKRPGTSVGKRIAPSSLDLHRVFTQRRFLAHFRGSLDGTLLEAQIDSVQVCNNGEHDYLLSGRFSKLDAKQLEILRKMSIENAAILLQRQVS*
Ga0062595_10220145413300004479SoilINYALSQYQMGPATGVSPLGPAKEGIMADSRNDCELWLWDGATEYEGIFVKMDGASFSARVRQPRRAGSSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVQSVQICGNAEHDYLVSGRFSKLDEQQLALLRKMSVENAALLLQRQVS*
Ga0070690_10085431813300005330Switchgrass RhizosphereMADVRNDCELWMWDGASEYEGIFVKLDGANFSARVRQAKRAGSSLGKRIAPSSIDLNKMFTERRFLAHFRGSLDGTLLEAQVQSVQVCSNGEHDYLLSGRFSKLDEQQLALLRKMSVENAAILLQRQVS*
Ga0070689_10094649213300005340Switchgrass RhizosphereMTERNDSELWMWDGATEYEGIFIKLDGAEFSARLRQVRRPGTTLGKRVATSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQVDSVQICTNGEHDYLISGKFSKLDAKQLELLKKMSVENAALLLQRQVS*
Ga0070689_10218535613300005340Switchgrass RhizosphereMAELKNDSELWMWDGATEYEGIFVKMDGAAFSARVRPVRRGGTTLGKRVNTSSLDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQVCSNGEHDFLVSGKFAKLDEKQLDLLRKMS
Ga0070687_10041050813300005343Switchgrass RhizosphereMADVKNDSELWMWDGATEYEGIFVKMDGAAFSARVRPVRRGGTTLGKRVNTSSLDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQVCTGAEHDFLVSGKFAKLDEKQLDLLRKMSVENAALLLQRQVS*
Ga0070673_10120981813300005364Switchgrass RhizosphereMADTRNDSELWLWDGATEYEGIFVKLDGASFSARVRQPRRAGSSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVQSVQICGNAEHDYLVSGRFSKLDEQQLALLRKMSVENAALLLQRQVS*
Ga0070688_10159956013300005365Switchgrass RhizosphereMADLKNDSELWMWDGATEYEGIFVKLDGASFSARVRQVRRGGTSIGKRVNTSTIDLHRMFTTRRFLSHFRGSLDGTLLEAQVDSVQACHNGEHEYLLSGKFAKLD
Ga0070703_1026819713300005406Corn, Switchgrass And Miscanthus RhizosphereMADLKNDSELWMWDGATEYEGIFVKMDGAAFSARVRPVRRGGTTLGKRVNTSSLDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQVCSNGEHDFLVSGKFAKLDEKQLDLLRKMSVENAALLLQRQVS*
Ga0070707_10232531913300005468Corn, Switchgrass And Miscanthus RhizosphereMADARNDCELWLWDGATEYEGIFIKLDGASFSARVRQARRAGSSLGKRIAPSSLDLNKMFTERRFLAHFRGSLDGTLLEAQVQSVQVSTGGEHDYLLSGKFSKLDE
Ga0070698_10067570823300005471Corn, Switchgrass And Miscanthus RhizosphereMADARNDCELWLWDGATEYEGIFIKLDGASFSARVRQARRAGSSLGKRIAPSSLDLNKMFTERRFLAHFRGSLDGTLLEAQVQSVQVSTGGEHDYLLSGKFSKLDEQQLALLRKMSVENAAILLQRQVS*
Ga0070699_10199477313300005518Corn, Switchgrass And Miscanthus RhizosphereMGDARNDAELWMWDGASEYEGIFVKLDGANFSARVRQARKAGPTLGKRITPSSIDLNKMFTDRRFLAHFRGSLDGTLLEAQILGVQPSGSGDYDFLVTGKFSKLDDQQLSLLRKMSVENAAKMLQREVS*
Ga0070738_1016819623300005531Surface SoilMADPKNEAELWMWDGAAEYEGIFTRLDGEAFSARVRQARRSGGTVGKRLASLSMDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACSEGPYEFLLSGRFARLDEKQLALLRKMSVENAALLLQRQVS*
Ga0070697_10014047113300005536Corn, Switchgrass And Miscanthus RhizosphereMADLKNDSELWMWDGATEYEGIFVKLDGASFSARVRQARRAGSSMGKRISPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVQSVQVSTNSEHDFLVSGRFSKLDEKQLALLRKMSVENAAILLQRQVS*
Ga0070730_1000647273300005537Surface SoilMADPKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRISPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACSDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALLLQRQVS*
Ga0070731_10005647103300005538Surface SoilMADPRNDVELWMWDGASEYEGIFTRLDGEAFSARVRQARRAGASLGKRLAPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAQIEGVQACSEGPFEFLLSGRFAKLDDKQLALLRKMSVENAALMLQRQVS*
Ga0070732_1028590913300005542Surface SoilMADPKNDAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRIAPSSLDLHRVFTQRRFLAHFTGSMDGMLLEAHIEGVQACSDGPYEFLLSGRFAKLDE
Ga0070704_10011117823300005549Corn, Switchgrass And Miscanthus RhizosphereMADARNDCVFWLWDGATEYEGIFIKLDGASFSARVRQARRAGSSLGKRIAPSSLDLNKMFTERRFLAHFRGSLDGTLLEAQVQSVQVSTGGEHDYLLSGKFSKLDEQQLALLRKMSVENAAILLQRQVS*
Ga0070702_10087251013300005615Corn, Switchgrass And Miscanthus RhizosphereMAAAKDDVELWMWDGATEYEGVFTRLDGETFSARVRQARRSGVSLGKRGGASSADLHRVFTQRRFLAHFTGSMDGTLLEAHIESVQASSDGAFEYLLSGRFAKLDEKQLALLRKMSVENAALMLQRQVS*
Ga0066903_10315575223300005764Tropical Forest SoilMAELKNDSELWMWDGATEYEGIFVKLDGPTFSARVRQVRRGGTTLGKRVPTSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQPCHNGEHDYLVSGRFSKLDEQQLELLRKMSVENAALLLQRQVS*
Ga0066903_10644811313300005764Tropical Forest SoilKWRMGLATGVSPPDPQWSARRGAGKEGIMADVRNDCELWMWDGASEYEGIFIKLDGASFSARVRQARRAGSSLGKRIAPSSLDLNTTFTERRFLAHFRGSLDGTLLEAQILSVQVCSNGEHDYLLSGRFSKLDEQQLALLRKMSVENAAILLQRQVS*
Ga0074470_1096213963300005836Sediment (Intertidal)MGSAKDGVELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGTSLGRRGGASSLDLHRVFTQRRFLAHFTGSTDGTLLEAHIEGVQASSDGAFEYLLSGRFAKLDEKQLALLRKMSVENAAVLLQRQVS*
Ga0066652_10127314513300006046SoilMADTRNDSELWLWDGATEYEGIFIKLDGASFSARVRQPRRAGSSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVQSVQICGNAEHDYLVSGRFSKLDEQQLALLRKMSVENAALLLQRQVS*
Ga0070715_1068907323300006163Corn, Switchgrass And Miscanthus RhizosphereAKDDIELWMWDGATEYEGIFTRLDGETFSARVRQARRSGTSLGRRGGASSLDLSRVFTQRRFLAHFTGSMDGTLLEAHIDGVQASSDAAYEYLLSGRFAKLDEKQLALLRKMSVENAALMLQRQVS*
Ga0075428_10209568813300006844Populus RhizosphereMGDPKNDSELWMWDGATEYEGIFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLMEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLETLRKMSIENAALLLQRQVS*
Ga0075433_1073134613300006852Populus RhizosphereMADPKNDSELWMWDGATEYEGIFIKLDGAAFSARVRQVRRGGTTIGKRINSSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQVDSVQVCTSGEHDYMVSGRFSKLDDKQLELLRKMSVENAALMLQRQVS*
Ga0075425_10211511213300006854Populus RhizosphereMADPKNDSELWMWDGATEYEGIFIKLDGAAFSARVRQVRRGGTTMGKRINSASIDLHRMFTTRRFLSHFRGSLDGTLLEAQVDSVQVCTTGEHDYMVSGRFSKLDAKQLELLRKMSVENAALMLQRQVS*
Ga0079216_1200891513300006918Agricultural SoilMAELKNDSELWMWDGATEYEGIFVKMDGAAFSARIRQVRRGGATMGKRLTSSSLDLHRMFTTRRFLSHFRGSLDGTLLEAQVDGVQVCQNGEHDFLVSGRFSKLDDKQLEMLRKMSVENAALLLQRQVS*
Ga0111539_1026114833300009094Populus RhizosphereAVRRVHRDWSPDASAARAEPRGNKEGTMGDPKNDSELWMWDGATEYEGIFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLMEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLETLRKMSIENAAILLQRQVS*
Ga0075418_1164924313300009100Populus RhizosphereGIFVKLDGASFSARVRQVRRGGTSIGKRVNTSSIDLHRMFTTRRFLSHFRGSLDGALLEAQIDSVQACHNGEHEYLLSGKFAKLDEKHLEMLRKMSVENAALLLQRQVS*
Ga0075418_1251584713300009100Populus RhizosphereMGDPKNDSELWMWDGATEYEGIFVKLDGADFSARVRQAKRPGAATGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLLEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLETLRKMSIENAALLLQRQVS*
Ga0114129_1093137313300009147Populus RhizosphereMWDGATEYEGIFVKLDGADFSARVRQAKRPGAATGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLLEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLEILRKMSVENAAILLQRQVS*
Ga0111538_1008601963300009156Populus RhizosphereFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLMEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLETLRKMSIENAAILLQRQVS*
Ga0111538_1115744423300009156Populus RhizosphereMGDPKNDSELWMWDGATEYEGIFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLLEAQIDSVQACHNGEHDFLLSGRFSKLDAKQLEILRKMSIENAAILLQRQVS*
Ga0105859_118544713300009651Permafrost SoilMGNPKDGIELWMWDGATEYEGIFTRLDGEAFSARVRQARRPGASLGRRGGASSLDLHRVFTQRRFLAHFTGSMDGALLEAHIEGVQASSDADYEYLLSGRFAKLDEKQLALLRKM
Ga0134062_1024940213300010337Grasslands SoilLWLWDGASEYEGIFVKLDGASFSARVRQPRRAGSSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVQSVQICGSGEHDYLLSGRFSKLDEQQLALLRKMSVENAALMLQRQVS
Ga0134124_1183450413300010397Terrestrial SoilMADTRNDSELWLWDGATEYEGIFVKLDGASFSARVRQPRRAGSSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVQSFQICGNAEHDYLVSGRFSKLDEQQLALLRKMSVENAALLLQRQVS*
Ga0134127_1003220923300010399Terrestrial SoilMAELKNDSELWMWDGATEYEGIFVKLDGASFSARVRQVRRGGTSIGKRVNTSTIDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQACHNGEHEYLLSGKFAKLDEKHLEMLRKMSVENAALLLQRQVS*
Ga0134122_1011306623300010400Terrestrial SoilMADSRNDSELWMWDGATEYEGIFVKLDGASFSARVRQARRGGTSLGRRLAPSSQDLNRMFTQRRFLSHFRGSLDGTLLEAQVESVQASSAAEHEYLIAGRFSKLDEKQLETLRKMSVENAALLLQRQAV*
Ga0134122_1042550523300010400Terrestrial SoilMADPKNDSELWMWDGATEYEGIFVKMDGATFSAKVRQARRGNTAPIGKRSAPSSLDLHKVFTQRRFLAHFRGSLDGTLLEAQIDNVQTSSSGEHDYLISGRFSKLDEKQLAMLRKMSVENAALLLQRQVS*
Ga0134122_1083576713300010400Terrestrial SoilMADAKNESELWMWDGAAEYEGVFTRLDGEAFSARMRQARRSGTSLGKRIAPSSLDLHKVFTQRRFLAHFTGSMDGTLLEAHIEGVQVCQEGPYEFLLSGRFAKLDEKQLALLRKMSVENAALMLQRRVV*
Ga0134121_1005746533300010401Terrestrial SoilMGPAVWGERGKEGTMADLKNDSELWMWDGATEYEGIFVKLDGASFSARVRQARRAGSSMGKRISPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVQSVQVSTNSEHDFLVSGRFSKLDEKQLALLRKMSVENAAILLQRQVS*
Ga0134123_1019144833300010403Terrestrial SoilMADLKNDSELWMWDGATEYEGIFVKMDGAAFSARIRPVRRGGTTLGKRVNTSSVDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQVCTGAEHDFLVSGKFAKLDEKQLEMLRKMSVENAALLLQRQVS*
Ga0134123_1079943713300010403Terrestrial SoilMADSRNDSELWMWDGATEYEGIFVKLDGASFSARVRQARRGGTSLGRRLAPSSQDLNRMFTQRRFLSHFRGSLDGTLLEAQVESVQASSAAEHEYLIAGRFSKLDEKQLETLRKMSVENAALL
Ga0150983_1155235813300011120Forest SoilMADPKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRISPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACNDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALMLQRQVS*
Ga0150983_1303180113300011120Forest SoilMADPKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRISPSSLDFHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACNDGPYEFLLSGRFAKLDEKQLAMLRKMSVENAALMLQRQVS*
Ga0150983_1626930323300011120Forest SoilMADPRNDSELWMWDGATEYEGIFVKLDGAVFSARVRQARRAGTSLVKRLAPSSLDLNRMFTQRRFLAHFKGSLDGTLLEAQIDGVQASSDADHDFLLSGRFSKLDERQLEMLRKMSVENAALLLQRQAS*
Ga0137462_117797013300011421SoilMGDPKNDSELWMWDGATEYEGIFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLMEAQIDSVQACHNGEHDFLLSGRFSKLDAKQLEILRKMSIENA
Ga0150984_11154377313300012469Avena Fatua RhizosphereMAAAKDDVELWMWDGATEYEGVFTRLDGETFSARVRQARRSGTSLGKRGGASSADLHRVFTQRRFLAHFTGSMDGTLLEAHIESVHASGDGAFEYLLSGRFAKLDEKQLALLRKMSVENAALMLQRQVS*
Ga0157291_1037890413300012902SoilRGNKEGTMGDPKNDSELWMWDGATEYEGIFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLMEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLETLRKMSIENAAILLQRQVS*
Ga0157289_1031988813300012903SoilMAAAKDDVELWMWDGATEYEGVFTRLDAEAFSARVRQARRSGVSLGKRGGASSADLHRVFTQRRFLAHFTGSMDGTLLEAHIESVQASSDGAFEYLLSGRFAKLDEKQLALLRKMSVENAALMLQRQVS*
Ga0137410_1000562673300012944Vadose Zone SoilMADAKSDAELWMWDGATEYEGIFTRLDGEAFSARVRQSKRSGTSLGKRIAPSSLDLHRVFTQRRFLAHFAGSMDGTLLEAHIEGVQACAEGPYEFLLSGRFAKLDEKQLALLRKMSVENAALLLQRQVS*
Ga0126369_1261032413300012971Tropical Forest SoilKLDGANFSARVRQARRAGSSLGKRIAPSSLDLNKMFTERRFLAHFRGSLDGTLLEAQVQSVQVSSNAEHDYLLSGRFSKLDEQQLALLRKMSVENAAILLQRQVS*
Ga0134079_1006203533300014166Grasslands SoilMSDPKSASELWLWDGASEYEGIFVKLDGASFSARVRQPRRAGSSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVQSVQICGNGEHDYLVSGRFSKLDEQQLALLRKMSVENAALLLQRQVS*
Ga0132255_10497463213300015374Arabidopsis RhizosphereMADPKNDSELWMWDGATEYEGIFVKLDGADFAARVRQAKRPGASVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLLEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLEILRKMSIENAAILLQRQVS*
Ga0182032_1104626813300016357SoilGIMADSRNDCELWLWDGASEYEGIFVKLDGASFSARVRQPRRAASSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGALLEAQVQSVQVCGDGEHDYLVSGRFSKLDEQQLALLRKMSVENAAILLQRQVS
Ga0066669_1161190713300018482Grasslands SoilMADTRNDSELWLWDGATEYEGIFIKLDGASFSARVRQPRRAGSSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVQSVQICGNGEHDYLVSGRFSKLDEQQLALLRKMSVENAALLLQRQVS
Ga0173479_1040618223300019362SoilMAAAKDDVELWMWDGATEYEGVFTRLDAEAFSARVRQARRSGVSLGKRGGASSADLHRVFTQRRFLAHFRGSLDGTLLEAQVLSVQVCGNGEHDYLVSGRFSKLDEQQLALLRKMSVENAALLLQRQVS
Ga0193713_111378513300019882SoilMADTKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGTSLGKRIAPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACNDGPYEFLLSGRFARLDEKQLALLRKMSVENAALMLQRQVS
Ga0196964_1044583013300020202SoilMWDGATEYEGIFVKLDGASFSARVRQAGRSGKAIGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLLEAQIESVQACHNGEHEFLLSGRFSKLDPKQLEMLRKMSVENAAILLQRQVS
Ga0213876_1007370233300021384Plant RootsMADAKNEAELWMWDGAAEYEGIFTRLDGEAFSARVRQARRSGASLGKRIAPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACSQGPYEFLLSGRFAKLDEKQLALLRKMSVENAALLLQRQVV
Ga0242662_1029830413300022533SoilMADPKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRISPSSLDFHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACNDGPYEFLLSGRFAKLDEKQLAMLRKMSVENAALMLQRQVS
Ga0209166_1000445273300027857Surface SoilMADPKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRISPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACSDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALLLQRQVS
Ga0209579_1000329463300027869Surface SoilMADPRNDVELWMWDGASEYEGIFTRLDGEAFSARVRQARRAGASLGKRLAPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAQIEGVQACSEGPFEFLLSGRFAKLDDKQLALLRKMSVENAALMLQRQVS
Ga0209579_1018775823300027869Surface SoilMADPKNDAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRIAPSSLDLHRVFTQRRFLAHFTGSMDGMLLEAHIEGVQACSDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALMLQRQVS
Ga0209486_1064788913300027886Agricultural SoilMAELKNDSELWMWDGATEYEGIFVKMDGAAFSARIRQVRRGGATMGKRLTSSSLDLHRMFTTRRFLSHFRGSLDGTLLEAQVDGVQVCQNGEHDFLVSGRFSKLDDKQLEMLRKMSVENAALLLQRQVS
Ga0207428_1113191213300027907Populus RhizosphereEGIFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLMEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLETLRKMSIENAAILLQRQVS
Ga0210261_102963013300030582SoilMADAKNDSELWMWDGATEYEGIFVKLDGASFSARVRPARRAGASMGKRLAASSLDLHRIFTQRRFLAHFKGSLEGSLLEAQIESVQASSDGDHDYLLSGRFSKLDEKQLETLRRMSVENAAVLLQRQVS
Ga0265460_1061047013300030740SoilGFKEGIMADAKNDSELWMWDGATEYEGIFVKLDGAAFSARVRPARRAGTSMGKRLAPSSLDLHRIFTQRRFLAHFKGSLDGSLLEAQIESVQASSDGDHDYLLSGRFSKLDEKQLETLRRMSVENAAVLLQRQVS
Ga0308178_107630513300030990SoilMADPKNDSELWMWDGATEYEGIFVKMDGATFSARVRQARRGNTAPIGKRSAPSSLDLHKVFTQRRFLAHFRGSLDGTLLEAQIDGVQACGTGDHDFLISGRFSKLDEKQMAMLRKMSVENAALLLQRQVS
Ga0073997_1102999713300030997SoilMADPKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGTSLGKRIAPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACNDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALMLQRQVS
Ga0073995_1093208513300031047SoilMADPKNEAELWMWDGATEYEGIFIRLDGEAFSARVRQARRSGASLGKRIAPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIDGVQACSDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALML
Ga0308197_1011197023300031093SoilMADPKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGTSLGKRIAPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACNDGPYEFLLSGRFARLDEKQLALLRKMSVENAALMLQRQVS
Ga0308194_1011167913300031421SoilMADPKNDSELWMWDGATEYEGIFVKMDGATFSARVRQARRGNTAPIGKRSAPSSLDLHKVFTQRRFLAHFRGSLDGTLLEAQINGVQACGNGEHDFLISGSFSKLDEKQMAMLRKMSVENAALLLQRQVS
Ga0310813_10000062213300031716SoilMGPATGVSPLGPAKEGIMADSRNDCELWLWDGATEYEGIFVKMDGASFSARVRQPRRAGSSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVLSVQVCGNGEHDYLVSGRFSKLDEQQLALLRKMSVENAALLLQRQVS
Ga0310813_1000867833300031716SoilMADSRNDCELWLWDGATEYEGIFVKMDGASFSARVRQPRRAASSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVLSVQVCGNGEHDYLVSGRFSKLDEQQLALLRKMSVENAALLLQRQVS
Ga0310813_1002831323300031716SoilMAEMKNDSELWMWDGATEYEGIFVKMDGAAFSARIRQVRRGGTPLGKRVNTSTLDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQVCTNAEHDFLVSGKFAKLDEKQLDMLRKMSVENAALLLQRQVS
Ga0310813_1013940233300031716SoilMTERNDSELWMWDGATEYEGIFIKLDGAEFSARLRQVRRPGTTLGKRVATSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQVDSVQVCTNGEHDYLISGKFSKLDAKQMELLKKMSVENAAILLQRQVS
Ga0310813_1047971133300031716SoilDSELWMWDGATEYEGIFVKMDGAAFSARVRPVRRGGTTLGKRVNTSSLDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQVCSNGEHDFLVSGKFAKLDEKQLDLLRKMSVENAALLLQRQVS
Ga0310813_1080820423300031716SoilMADPKNDSELWMWDGATEYEGIFVKLDGADFAARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLLEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLEILRKMSIENAALLLQRQVS
Ga0307475_1066040923300031754Hardwood Forest SoilMADPKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRAGASLGKRLAPSSLDLHKVFTQRRFLAHFTGSLDGTLLEAHIEGVQACGDGPYEFLLSGRFAKLDDKQLALLRKMSVENAALLLQRQVS
Ga0306921_1047102913300031912SoilMADPKNEAELWLWDGAAEYEGIFTRLDGEAFSARVRQARRSGGSLGKRLAPSSMDLHRVFTQRRFLAHFTGSMDGTLLEAHVEGVQACSDGPYEYLLSGRFAKLDEKQLALLRKMSVENAALLLQRQVS
Ga0310912_1113369813300031941SoilMADPKNEAELWLWDGAAEYEGIFTRLDGEAFSARVRQARRSGGSLGKRLAPSSMDLHRVFTQRRFLAHFTGSMDGTLLEAHVEGVQACSDGPYEYLLSGRFAKLDEKQLALL
Ga0306926_1269656113300031954SoilMAELKNDSELWMWDGATEYEGIFVKLDGPTFSARVRQVRRGGTTLGKRVPTSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQPCHNGEHDYLVSGRFSKLDEQQLDLLRKMSVENAALLLQRQVS
Ga0307479_1019345733300031962Hardwood Forest SoilMADPKNEAELWLWDGATEYEGIFTRLDGEAFSARVRQARRSGASLGKRIAPSSLDLHRVFTQRRFLAHFTGSIDGTLLEAHIEGVQACSDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALLLQRQVS
Ga0306922_1137086513300032001SoilMAELKNDSELWMWDGATEYEGIFVKLDGPTFSARVRQVRRGGTTLGKRVPTSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQPCHNGEHDYLVSGRFSKLDEQQLELLRKMSVE
Ga0318533_1128773113300032059SoilMAELKNDSELWMWDGATEYEGIFVKLDGPTFSARVRQVRRGGTTLGKRVPTSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQPCHNGEHDYLVSGRFSKLDEQQLE
Ga0315912_1092463013300032157SoilMADPKNDAELWMWDGATEYEGIFTRLDGEAFSARVRQAKRSGASLGKRISPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACNDGPYEFLLSGRFAKLDEAQLALLRKMSVENAALLLQRQVS
Ga0315281_1019425923300032163SedimentMADSRNDSELWMWDGATEYEGIFVKLDGAVFSARVRQARRAGTSLGKRLAPSSLDLNRMFTQRRFLAHFKGSLDGTLLEAQIDGVQASSDADHDFLLSGRFSKLDERQLEMLRKMSVENAALLLQRQAS
Ga0310812_1003107323300032421SoilMTERNDSELWMWDGATEYEGIFIKLDGAEFSARLRQVRRPGTTLGKRVATSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQVDSVQICTNGEHDYLISGKFSKLDAKQLELLKKMSVENAALLLQRQVS
Ga0310812_1021668223300032421SoilIMADLKNDSELWMWDGATEYEGIFVKMDGAAFSARVRPVRRGGTTLGKRVNTSSLDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQVCSNGEHDFLVSGKFAKLDEKQLDLLRKMSVENAALLLQRQVS
Ga0310812_1021761713300032421SoilMADVRDDCELWMWDGATEYEGIFVKLDGASFSARVRQARRAGSSLGKRIAPSSLDLNKMFTQRRFLAHFRGSLDGTLLEAQVQSVQVSSDGEHDYLVSGRFSKLDEQQLALLRKMSVENAALLLQRQVS
Ga0310810_1048037713300033412SoilDLKNDSELWMWDGATEYEGIFVKMDGAAFSARVRPVRRGGTTLGKRVNTSSLDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQVCSNGEHDFLVSGKFAKLDEKQLDLLRKMSVENAALLLQRQVS
Ga0314862_0178841_201_5243300033803PeatlandMADPKNEVELWMWDGATEYEGIFTRLDGEAFSARVRQARRAGASLGKRLAPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACGDGPYEFLLSGRFAKLDEKQ
Ga0370548_090258_37_5133300034644SoilMIAGALSAPGSTRQRLPAAGSGLQAQEGNMADPKNEAELWMWDGATEYEGIFTRLDGEAFSARVRQARRSGTSLGKRIAPSSLDLHRVFTQRRFLAHFTGSMDGTLLEAHIEGVQACNDGPYEFLLSGRFAKLDEKQLALLRKMSVENAALMLQRQVS
Ga0314782_131314_130_5193300034661SoilMGDPKNDSELWMWDGATEYEGIFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLMEAQIDSVQACHNGEHEYLLSGRFSKLDAKQLETLRKMSIENAAILLQRQVS
Ga0314782_213817_129_5063300034661SoilMADVKNDSELWMWDGATEYEGIFVKMDGAAFSARIRPVRRGGTTLGKRVNTSSVDLHRMFTTRRFLSHFRGSLDGTLLEAQIDSVQVCTGAEHDFLVSGKFAKLDEKQLEMLRKMSVENAALLLQR
Ga0314782_215683_32_4213300034661SoilMADPKNDSELWMWDGATEYEGIFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLLEAQIDSVQACHNGEHDYLLSGRFSKLDAKQLEILRKMSIENAALLLQRQVS
Ga0314783_140595_14_4723300034662SoilVHRDWSPDASAARAAPRGNKEGTMGDPKNDSELWMWDGATEYEGIFVKLDGADFSARVRQAKRPGTSVGKRISPSSLDLHRVFTQRRFLAHFRGSLDGTLMEAQIDSVQACHNGEHEYLLSGRFSKLDAKQLETLRKMSIENAAILLQRQVS
Ga0373958_0175749_44_4003300034819Rhizosphere SoilMWDGATEYEGIFIKLDGAEFSARLRQVRRPGTTLGKRVATSSIDLHRMFTTRRFLSHFRGSLDGTLLEAQVDSVQICTNGEHDYLISGKFSKLDAKQLELLKKMSIENAALLLQRQVS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.