NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090884

Metagenome Family F090884

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090884
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 55 residues
Representative Sequence MSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKENV
Number of Associated Samples 85
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 82.41 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 81.48 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (59.259 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(46.296 % of family members)
Environment Ontology (ENVO) Unclassified
(83.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.333 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 50.91%    Coil/Unstructured: 49.09%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF10544T5orf172 2.80
PF00462Glutaredoxin 2.80
PF12705PDDEXK_1 1.87
PF05367Phage_endo_I 0.93
PF11753DUF3310 0.93
PF03796DnaB_C 0.93
PF00145DNA_methylase 0.93
PF08401ArdcN 0.93
PF13455MUG113 0.93
PF00166Cpn10 0.93
PF06147DUF968 0.93
PF06067DUF932 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.93
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 0.93
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 0.93
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 0.93
COG4227Antirestriction protein ArdCReplication, recombination and repair [L] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A59.26 %
All OrganismsrootAll Organisms40.74 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10207387Not Available652Open in IMG/M
3300000116|DelMOSpr2010_c10244867Not Available549Open in IMG/M
3300001450|JGI24006J15134_10031720All Organisms → Viruses → Predicted Viral2310Open in IMG/M
3300001450|JGI24006J15134_10069375All Organisms → Viruses → Predicted Viral1358Open in IMG/M
3300001450|JGI24006J15134_10143878Not Available790Open in IMG/M
3300001450|JGI24006J15134_10183878Not Available652Open in IMG/M
3300001460|JGI24003J15210_10000765Not Available13802Open in IMG/M
3300001460|JGI24003J15210_10095695Not Available862Open in IMG/M
3300001472|JGI24004J15324_10000168Not Available25501Open in IMG/M
3300001472|JGI24004J15324_10156149Not Available522Open in IMG/M
3300002231|KVRMV2_101074174Not Available585Open in IMG/M
3300002514|JGI25133J35611_10080673All Organisms → Viruses → Predicted Viral1001Open in IMG/M
3300005430|Ga0066849_10326634Not Available584Open in IMG/M
3300006164|Ga0075441_10061486All Organisms → Viruses → Predicted Viral1474Open in IMG/M
3300006164|Ga0075441_10123040All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium987Open in IMG/M
3300006164|Ga0075441_10185977Not Available776Open in IMG/M
3300006165|Ga0075443_10018468All Organisms → Viruses → Predicted Viral2346Open in IMG/M
3300006190|Ga0075446_10077591Not Available994Open in IMG/M
3300006193|Ga0075445_10023350All Organisms → Viruses → Predicted Viral2628Open in IMG/M
3300006738|Ga0098035_1026992All Organisms → Viruses → Predicted Viral2200Open in IMG/M
3300006738|Ga0098035_1074008Not Available1211Open in IMG/M
3300006750|Ga0098058_1132357All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300006751|Ga0098040_1057891All Organisms → Viruses → Predicted Viral1197Open in IMG/M
3300006752|Ga0098048_1262845Not Available503Open in IMG/M
3300006753|Ga0098039_1054245Not Available1400Open in IMG/M
3300006753|Ga0098039_1073065All Organisms → Viruses → Predicted Viral1189Open in IMG/M
3300006754|Ga0098044_1046589Not Available1857Open in IMG/M
3300006754|Ga0098044_1047234All Organisms → Viruses → Predicted Viral1842Open in IMG/M
3300006754|Ga0098044_1147525All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300006789|Ga0098054_1222804All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage684Open in IMG/M
3300006924|Ga0098051_1121533Not Available696Open in IMG/M
3300006929|Ga0098036_1236872Not Available552Open in IMG/M
3300006947|Ga0075444_10177533Not Available874Open in IMG/M
3300006947|Ga0075444_10276771Not Available653Open in IMG/M
3300008218|Ga0114904_1151910Not Available543Open in IMG/M
3300008221|Ga0114916_1041954All Organisms → Viruses → Predicted Viral1336Open in IMG/M
3300009000|Ga0102960_1023719All Organisms → Viruses → Predicted Viral2296Open in IMG/M
3300009001|Ga0102963_1449152Not Available506Open in IMG/M
3300009027|Ga0102957_1005911All Organisms → Viruses → Predicted Viral4146Open in IMG/M
3300009124|Ga0118687_10224808Not Available690Open in IMG/M
3300009173|Ga0114996_10231122All Organisms → Viruses → Predicted Viral1475Open in IMG/M
3300009173|Ga0114996_10231122All Organisms → Viruses → Predicted Viral1475Open in IMG/M
3300009173|Ga0114996_10399789All Organisms → Viruses → Predicted Viral1054Open in IMG/M
3300009413|Ga0114902_1009969All Organisms → Viruses → Predicted Viral3307Open in IMG/M
3300009414|Ga0114909_1131789Not Available668Open in IMG/M
3300009418|Ga0114908_1220740Not Available583Open in IMG/M
3300009425|Ga0114997_10069222All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae2216Open in IMG/M
3300009428|Ga0114915_1094902Not Available894Open in IMG/M
3300009481|Ga0114932_10511697Not Available706Open in IMG/M
3300009481|Ga0114932_10722894Not Available579Open in IMG/M
3300009603|Ga0114911_1093141Not Available885Open in IMG/M
3300009605|Ga0114906_1226147Not Available618Open in IMG/M
3300009622|Ga0105173_1011369All Organisms → Viruses → Predicted Viral1252Open in IMG/M
3300009705|Ga0115000_10251485Not Available1153Open in IMG/M
3300010150|Ga0098056_1082175Not Available1102Open in IMG/M
3300010153|Ga0098059_1308257Not Available604Open in IMG/M
3300010155|Ga0098047_10080666Not Available1273Open in IMG/M
3300011013|Ga0114934_10055189All Organisms → Viruses → Predicted Viral2034Open in IMG/M
3300011013|Ga0114934_10303764Not Available719Open in IMG/M
3300011129|Ga0151672_152326Not Available587Open in IMG/M
3300012950|Ga0163108_10904793Not Available570Open in IMG/M
3300012952|Ga0163180_11364446Not Available586Open in IMG/M
3300012953|Ga0163179_10102205All Organisms → Viruses → Predicted Viral2074Open in IMG/M
3300017727|Ga0181401_1121941All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium650Open in IMG/M
3300017753|Ga0181407_1159200Not Available556Open in IMG/M
3300021957|Ga0222717_10000567Not Available31626Open in IMG/M
3300021958|Ga0222718_10220336All Organisms → Viruses → Predicted Viral1024Open in IMG/M
3300021964|Ga0222719_10465435Not Available768Open in IMG/M
3300022178|Ga0196887_1081885All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium753Open in IMG/M
3300024344|Ga0209992_10211340Not Available820Open in IMG/M
(restricted) 3300024518|Ga0255048_10368470Not Available695Open in IMG/M
3300025045|Ga0207901_1049035Not Available559Open in IMG/M
3300025050|Ga0207892_1042483Not Available531Open in IMG/M
3300025066|Ga0208012_1045148Not Available652Open in IMG/M
3300025078|Ga0208668_1081301Not Available575Open in IMG/M
3300025079|Ga0207890_1016447All Organisms → Viruses → Predicted Viral1474Open in IMG/M
3300025097|Ga0208010_1046891Not Available969Open in IMG/M
3300025108|Ga0208793_1192221Not Available516Open in IMG/M
3300025109|Ga0208553_1113376Not Available619Open in IMG/M
3300025118|Ga0208790_1026486All Organisms → Viruses → Predicted Viral1946Open in IMG/M
3300025120|Ga0209535_1004000All Organisms → cellular organisms → Bacteria9286Open in IMG/M
3300025120|Ga0209535_1047638All Organisms → Viruses → Predicted Viral1853Open in IMG/M
3300025120|Ga0209535_1059965All Organisms → Viruses → Predicted Viral1559Open in IMG/M
3300025120|Ga0209535_1103482All Organisms → Viruses → Predicted Viral1013Open in IMG/M
3300025138|Ga0209634_1150062Not Available952Open in IMG/M
3300025138|Ga0209634_1255240Not Available632Open in IMG/M
3300025141|Ga0209756_1234481Not Available681Open in IMG/M
3300025241|Ga0207893_1029083Not Available781Open in IMG/M
3300025266|Ga0208032_1071703All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium738Open in IMG/M
3300025266|Ga0208032_1077730Not Available690Open in IMG/M
3300025873|Ga0209757_10154325Not Available720Open in IMG/M
3300026138|Ga0209951_1008341All Organisms → Viruses → Predicted Viral2283Open in IMG/M
3300027522|Ga0209384_1012160All Organisms → Viruses → Predicted Viral2999Open in IMG/M
3300027672|Ga0209383_1065930All Organisms → Viruses → Predicted Viral1300Open in IMG/M
3300027714|Ga0209815_1122298Not Available850Open in IMG/M
3300027771|Ga0209279_10026858All Organisms → Viruses → Predicted Viral1715Open in IMG/M
3300027779|Ga0209709_10155353Not Available1116Open in IMG/M
3300027844|Ga0209501_10085065All Organisms → Viruses → Predicted Viral2196Open in IMG/M
3300028018|Ga0256381_1068032Not Available527Open in IMG/M
3300028022|Ga0256382_1011269All Organisms → Viruses → Predicted Viral1721Open in IMG/M
3300028022|Ga0256382_1131330Not Available601Open in IMG/M
3300028022|Ga0256382_1149302Not Available560Open in IMG/M
3300031167|Ga0308023_1007400All Organisms → Viruses → Predicted Viral2431Open in IMG/M
3300031612|Ga0308009_10016904All Organisms → Viruses → Predicted Viral2923Open in IMG/M
3300033742|Ga0314858_103494All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage723Open in IMG/M
3300034628|Ga0326755_013422Not Available780Open in IMG/M
3300034629|Ga0326756_002592Not Available2394Open in IMG/M
3300034656|Ga0326748_047339Not Available605Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine46.30%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine11.11%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean10.19%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface4.63%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.70%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water3.70%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater2.78%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.78%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.85%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.85%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.85%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.85%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.93%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.93%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.93%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.93%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.93%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.93%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.93%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002514Marine viral communities from the Pacific Ocean - ETNP_6_85EnvironmentalOpen in IMG/M
3300005430Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006165Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300008218Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6EnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300011129Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02EnvironmentalOpen in IMG/M
3300012950Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025050Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025078Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025079Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025241Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)EnvironmentalOpen in IMG/M
3300025266Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026138Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027771Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027844Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300031167Marine microbial communities from water near the shore, Antarctic Ocean - #418EnvironmentalOpen in IMG/M
3300031612Marine microbial communities from water near the shore, Antarctic Ocean - #127EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M
3300034628Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961EnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1020738733300000101MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYHFAWDNIVDVDCCSECSTKENV*
DelMOSpr2010_1024486733300000116MarineGECIMSEYIINITEEETIQCHVCNEVFNTNEITTDDYHFAWDNIVDVDCCSECSTKENV*
JGI24006J15134_1003172023300001450MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFVWDNIVDVDCCAECSTKENDNE*
JGI24006J15134_1006937523300001450MarineMSEYIINITEEETIQCHVCNKVFNTNEITTDDYYFAWDNIVDVDCCAECSTKEIENE*
JGI24006J15134_1014387823300001450MarineMSEYIVNITEEETIQCQICNEVFNTKEITTDDYYFAWDNIVNVDCCAECSTNGGNDVTI*
JGI24006J15134_1018387833300001450MarineNRRRGECKMSQYIVNITEEETIQCHVCNKVFNTNEITTDDYHFAWDNIVDVDCCTECLTEENS*
JGI24003J15210_10000765283300001460MarineMSQYIVNITEEETIQCHVCNKVFNTNEITTDDYHFAWDNIVDVDCCTECLTKENV*
JGI24003J15210_1009569513300001460MarineMSQYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCTECSTKENAKWN*
JGI24004J15324_1000016853300001472MarineMSQYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCTECLTKENAK*
JGI24004J15324_1015614923300001472MarineMSQYIVNITEEETIQCHVCNKVFNTNEITTDDYHFAWDNIVDVDCCTECLTEENS*
KVRMV2_10107417443300002231Marine SedimentMASFIIDITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCA
JGI25133J35611_1008067323300002514MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKENV*
Ga0066849_1032663433300005430MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECS
Ga0075441_1006148623300006164MarineMSEYIVNITEEETIQCQICNEVFNTKEITTDDYYFAWDNIVNVDCCAECSTNGGDNVTI*
Ga0075441_1012304023300006164MarineMSQYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCTECLT*
Ga0075441_1018597713300006164MarineMSQYIVNITEEETIQCHVCNEVFNTNEITTDDYHFAWDNIVDVDCCTECLTEENNDE*
Ga0075443_1001846893300006165MarineMSEYIVNIIEEETIQCQICNEVFNTKEITTDDYYFAWDNIVNVDCCAECSTNGGDNVTI*
Ga0075446_1007759123300006190MarineMSEYIVNITEEETIQCQICNEVFNTKEITTDDYYFAWDNIVDVDCCAECSTNGGDNVTI*
Ga0075445_10023350113300006193MarineIGERRMSEYIVNITEEETIQCQICNEVFNTKEITTDDYYFAWDNIVDVDCCAECSTNGGDNVTI*
Ga0098035_102699243300006738MarineMSEYIINITEEETIQCHVCSKVFNTNEITTDDYYFAWDNIVDVDCCAECVTRKTK*
Ga0098035_107400823300006738MarineMSEYIINLTEEETIQCQVCNKVFNTNEITTDDYYFAWD
Ga0098058_113235713300006750MarineMAEFIWDFIEEETIKCNVCNKVFNTREITTDDFNMAWDLQVEVDSCSECYDKVKTDAS*
Ga0098040_105789143300006751MarineMSEYIINITEEETIQCQMCNEVFNTNEITTDDYYFAWDNIVDVDCCAECATKENVDDN*
Ga0098048_126284523300006752MarineMSEYIINITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKENV*
Ga0098039_105424533300006753MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECVTRKTK*
Ga0098039_107306513300006753MarineMSEYIINITEEETIQCHVCSKVFNTEEITTDDYYFAWDNIVDVDCCAECSTKENVDEFTIRNTKHERG*
Ga0098044_104658923300006754MarineMSEYIINLTEEETIQCQVCNKVFNTNEITTDDYYFAWDNIVDVDCCAECSTK*
Ga0098044_104723453300006754MarineMSEYIINITEEETIQCQMCNEVFNTNEITTDDYYFAWDKIVDVDCCAECATKENVDDN*
Ga0098044_114752523300006754MarineMAEFIWDFIEEETIKCNVCNKVFNTREITTDDFNMAWDLQVEVDSCSECYDKVKTDG*
Ga0098054_122280413300006789MarineMSDYIINITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDC
Ga0098051_112153323300006924MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECATKENVDDN*
Ga0098036_123687233300006929MarineMSEYIINITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKENDNDK*
Ga0075444_1017753353300006947MarineMSEYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCAECSTKENV*
Ga0075444_1027677133300006947MarineVAEYIINITEEETIQCHVCNKVFNTEEITTDDYYFAWDNIVDVDCCAECDGKLRWSS*
Ga0114904_115191013300008218Deep OceanMASFIIDITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKE
Ga0114916_104195413300008221Deep OceanMSEYIVNIIEEETIQCQICNEVFNTKEITTDDYYFAWDNIVDVDCCAECSTNGGDNVTI*
Ga0102960_102371963300009000Pond WaterMIMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDKMVDVDCCAECAVKENDNESNL*
Ga0102963_144915213300009001Pond WaterMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDKMVDVDCC
Ga0102957_100591123300009027Pond WaterMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDKMVDVDCCVECAVKENENE*
Ga0118687_1022480823300009124SedimentMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDKMVDVDCCAECAVKENENE*
Ga0114996_1023112223300009173MarineMASFIIDITEEETIQCHVCNKVFNTEEITTDDYYFAWDNTVDVDCCAECGGELRWHS*
Ga0114996_1023112253300009173MarineMMSEYIINITEEETIKCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCSECSTKENEDE*
Ga0114996_1039978953300009173MarineMASYIIDITEEETIQCHVCNKVFNTEEITTDDYYFAWDNIVDVDCCAECDGKLR*
Ga0114902_100996933300009413Deep OceanMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKENHYA*
Ga0114909_113178923300009414Deep OceanMSEYIINITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKESV*
Ga0114908_122074033300009418Deep OceanMASFIIDITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKETEDE*
Ga0114997_1006922273300009425MarineMAEYIINITEEKTIQCQTCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTFGA*
Ga0114915_109490243300009428Deep OceanMNKYKVITTCECISEYIINITEEETIQYQVCNEVFNTNEITTDDYHFAWDNIVDVDCCAECSTKENV*
Ga0114932_1051169723300009481Deep SubsurfaceMASFIIDITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKKTEDE*
Ga0114932_1072289423300009481Deep SubsurfaceMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKENDNE*
Ga0114911_109314133300009603Deep OceanMSEYIINITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKENHYA*
Ga0114906_122614723300009605Deep OceanMSEYIINITEEETIQCYVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKENHYA*
Ga0105173_101136923300009622Marine OceanicVKGRMKMASFIIDITEEETIKCHVCNKVFNTEEITTDDYYFAWDNVVDVDCCAECVGEGR
Ga0115000_1025148553300009705MarineMAEYIINITEEKTIQCQTCNEVFNTNEITTDDYYFAWD
Ga0098056_108217523300010150MarineMSEYIVNLTEEETIQCQVCNEVFNTNEITTDDYYFAWDNIV
Ga0098059_130825713300010153MarineMSEYIINITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTK*
Ga0098047_1008066613300010155MarineMRRMKMSEYIINITEEETIQCHVCSKVFNTEEITTDDYYFAWDNIVDVDCCAECSTKENVDEFTIRNTKHERG*
Ga0114934_1005518953300011013Deep SubsurfaceMASFIIDITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKENVDE*
Ga0114934_1030376423300011013Deep SubsurfaceMIMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKEKVE*
Ga0151672_15232623300011129MarineLIISDYIINITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKEIENE*
Ga0163108_1090479323300012950SeawaterMKMSEYIINITEEETIQCQMCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKEIENE*
Ga0163180_1136444633300012952SeawaterMSEYIINITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECAVKENV*
Ga0163179_1010220533300012953SeawaterMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECVIKENE*
Ga0181401_112194133300017727SeawaterSQYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCTECLTKENV
Ga0181407_115920023300017753SeawaterMSQYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVNVDCCAECSTNGGNDVTI
Ga0222717_10000567273300021957Estuarine WaterMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDKMVDVDCCAECAVKENDNESNL
Ga0222718_1022033663300021958Estuarine WaterEETIQCHVCNEVFNTNEITTDDYYFVWDKMVDVDCCAECAVKENENE
Ga0222719_1046543543300021964Estuarine WaterECKMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFVWDKMVDVDCCAECAVKENENE
Ga0196887_108188523300022178AqueousMSEYIINITEEETIQCHVCNEVFNTNEITTDDYHFAWDNIVDVDCCSECSTKENV
Ga0209992_1021134033300024344Deep SubsurfaceMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKENDNE
(restricted) Ga0255048_1036847023300024518SeawaterMSEYIVNITEEETIQCQICNEVFNTKEITTDDYYFAWDNIVNVDCCAECSTNGGNDVTI
Ga0207901_104903523300025045MarineMAKYIIDITEEETIQCHVCSKVFNTEEITTDDYYFAWDNIVDVDCCAECDGKLRWSS
Ga0207892_104248323300025050MarineVAEYIINITEEETIQCHVCSKVFNTEEITTDDYYFAWDNIVDVDCCAECDGKLRWSS
Ga0208012_104514813300025066MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECVTRKTK
Ga0208668_108130123300025078MarineMAEFIWDFIEEETIKCNVCNKVFNTREITTDDFNMAWDLQVEVDSCSECYDKVKTDAS
Ga0207890_101644743300025079MarineMSQYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCTECSTKENAKWN
Ga0208010_104689133300025097MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTK
Ga0208793_119222113300025108MarineITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECVTRKTK
Ga0208553_111337613300025109MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCC
Ga0208790_102648653300025118MarineMSEYIINITEEETIQCQMCNEVFNTNEITTDDYYFAWDNIVDVDCCAECATKENVDDN
Ga0209535_100400043300025120MarineMSQYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCTECLTKENAK
Ga0209535_104763853300025120MarineMSQYIVNITEEETIQCHVCNKVFNTNEITTDDYHFAWDNIVDVDCCTECLTKENV
Ga0209535_105996523300025120MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFVWDNIVDVDCCAECSTKENDNE
Ga0209535_110348213300025120MarineEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCTECSTKENAKWN
Ga0209634_115006213300025138MarineMSQYIINITEEETIQCHVCNEVFNTEEITTDDYLFA
Ga0209634_125524013300025138MarineTEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCTECSTKENAKWN
Ga0209756_123448133300025141MarineMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECAVKEIENE
Ga0207893_102908323300025241Deep OceanMASFIIDITEEETIQCHVCNKVFNTEEITTDDYYFAWDNIVDVDCCAECDGKLRWSS
Ga0208032_107170333300025266Deep OceanMSQYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCTECLT
Ga0208032_107773023300025266Deep OceanMSEYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCAECSTKENV
Ga0209757_1015432543300025873MarineTEEETIKCHVCNKVFNTEEITTDDYYFAWDNVVDVDCCAECDGKLRWHS
Ga0209951_100834153300026138Pond WaterMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDKIVDVDCCAECAVKENDNESNL
Ga0209384_1012160123300027522MarineRMSEYIVNITEEETIQCQICNEVFNTKEITTDDYYFAWDNIVDVDCCAECSTNGGDNVTI
Ga0209383_106593013300027672MarineIGERRMSEYIVNITEEETIQCQICNEVFNTKEITTDDYYFAWDNIVDVDCCAECSTNGGDNVTI
Ga0209815_112229833300027714MarineMSQYIVNITEEETIQCHVCNEVFNTNEITTDDYHFAWDNIVDVDCCTECLTEENNDE
Ga0209279_1002685853300027771MarineMSEYIVNITEEETIQCQICNEVFNTKEITTDDYYFAWDNIVDVDCCAECSTNGGDNVTI
Ga0209709_1015535343300027779MarineMAEYIINITEEKTIQCQTCNEVFNTNEITTDDYYFAWDNIVDVDCCA
Ga0209501_1008506593300027844MarineMSEYIINITEEETIKCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCSECSTKENEDE
Ga0256381_106803233300028018SeawaterIIDITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKETEDE
Ga0256382_101126963300028022SeawaterMASFIIDITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVDCCAECSTKETEDE
Ga0256382_113133043300028022SeawaterMSEYIINITEEETIQCHVCNEVFNTNEITTDDYYFAWDNIVDVDC
Ga0256382_114930213300028022SeawaterMASFIIDITEEETIQCQVCNEVFNTNEITTDDYYFAWDNIVDVVPPP
Ga0308023_100740043300031167MarineMSEYIINITEKETIQCHVCNEVFNTNEITTDDYHFAWDNIVDVDCCAECSTKENV
Ga0308009_1001690443300031612MarineMSEYIINITEKETIQCHVCNEVFNTNEITTDDYHFAWDNIVDVDCCAECSTKENG
Ga0314858_103494_495_6743300033742Sea-Ice BrineMKMASFIIDITEEETIQCHVCNKVFNTEEITTDDYYFAWDNTVDVDCCAECGGELRWHS
Ga0326755_013422_424_6033300034628Filtered SeawaterMSEYIINITEEETIQCHVCNKVFNTNEITTDDYYFAWDNIVDVDCCAECVTKENEDVPN
Ga0326756_002592_1221_14003300034629Filtered SeawaterMNEYIINITEEETIQCHVCNKVFNTNEITTDDYYFAWDNIVDVDCCAECVTKENEDVPN
Ga0326748_047339_187_3543300034656Filtered SeawaterMSQYIINITEEETIQCHVCNEVFNTEEITTDDYHFAWDNIVDVDCCTECLTKENV


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