NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090875

Metagenome Family F090875

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090875
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 57 residues
Representative Sequence MTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLR
Number of Associated Samples 84
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 37.38 %
% of genes near scaffold ends (potentially truncated) 33.33 %
% of genes from short scaffolds (< 2000 bps) 88.89 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (76.852 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine
(14.815 % of family members)
Environment Ontology (ENVO) Unclassified
(75.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(84.259 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 83.02%    β-sheet: 0.00%    Coil/Unstructured: 16.98%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF02348CTP_transf_3 1.85
PF13394Fer4_14 0.93
PF05118Asp_Arg_Hydrox 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG1083CMP-N-acetylneuraminic acid synthetase, NeuA/PseF familyCell wall/membrane/envelope biogenesis [M] 1.85
COG1212CMP-2-keto-3-deoxyoctulosonic acid synthetaseCell wall/membrane/envelope biogenesis [M] 1.85
COG1861Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase familyCell wall/membrane/envelope biogenesis [M] 1.85
COG3555Aspartyl/asparaginyl beta-hydroxylase, cupin superfamilyPosttranslational modification, protein turnover, chaperones [O] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A76.85 %
All OrganismsrootAll Organisms23.15 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10033054All Organisms → Viruses → Predicted Viral2813Open in IMG/M
3300000101|DelMOSum2010_c10149758Not Available858Open in IMG/M
3300000101|DelMOSum2010_c10248580Not Available561Open in IMG/M
3300000101|DelMOSum2010_c10281522Not Available506Open in IMG/M
3300000115|DelMOSum2011_c10170237Not Available629Open in IMG/M
3300000115|DelMOSum2011_c10230460Not Available501Open in IMG/M
3300000117|DelMOWin2010_c10095204All Organisms → Viruses → Predicted Viral1110Open in IMG/M
3300000117|DelMOWin2010_c10249008Not Available520Open in IMG/M
3300001589|JGI24005J15628_10094994All Organisms → Viruses → Predicted Viral1015Open in IMG/M
3300001589|JGI24005J15628_10120883Not Available843Open in IMG/M
3300001589|JGI24005J15628_10188489Not Available589Open in IMG/M
3300001952|GOS2224_1019101Not Available1713Open in IMG/M
3300004448|Ga0065861_1101445Not Available992Open in IMG/M
3300004457|Ga0066224_1214697All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium2022Open in IMG/M
3300005941|Ga0070743_10085962Not Available1060Open in IMG/M
3300005941|Ga0070743_10097716Not Available987Open in IMG/M
3300005941|Ga0070743_10267709Not Available553Open in IMG/M
3300006029|Ga0075466_1044370Not Available1334Open in IMG/M
3300006164|Ga0075441_10129249Not Available959Open in IMG/M
3300006793|Ga0098055_1090507Not Available1199Open in IMG/M
3300006803|Ga0075467_10082497Not Available1940Open in IMG/M
3300006947|Ga0075444_10065432Not Available1670Open in IMG/M
3300007229|Ga0075468_10079212All Organisms → Viruses → Predicted Viral1068Open in IMG/M
3300007692|Ga0102823_1045021All Organisms → Viruses → Predicted Viral1187Open in IMG/M
3300007992|Ga0105748_10026080Not Available2218Open in IMG/M
3300008961|Ga0102887_1143412Not Available741Open in IMG/M
3300008961|Ga0102887_1276684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300009024|Ga0102811_1093864Not Available1123Open in IMG/M
3300009071|Ga0115566_10242990All Organisms → Viruses → Predicted Viral1081Open in IMG/M
3300009077|Ga0115552_1405176Not Available538Open in IMG/M
3300009079|Ga0102814_10064896Not Available2011Open in IMG/M
3300009428|Ga0114915_1066500Not Available1125Open in IMG/M
3300009428|Ga0114915_1118884Not Available771Open in IMG/M
3300009428|Ga0114915_1181450Not Available586Open in IMG/M
3300009433|Ga0115545_1050960All Organisms → Viruses → Predicted Viral1592Open in IMG/M
3300009435|Ga0115546_1079695Not Available1213Open in IMG/M
3300009437|Ga0115556_1132795Not Available928Open in IMG/M
3300009437|Ga0115556_1178322Not Available773Open in IMG/M
3300009443|Ga0115557_1255518Not Available669Open in IMG/M
3300009449|Ga0115558_1414545Not Available525Open in IMG/M
3300009472|Ga0115554_1194416All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium825Open in IMG/M
3300009472|Ga0115554_1314452Not Available618Open in IMG/M
3300009495|Ga0115571_1053385Not Available1864Open in IMG/M
3300009507|Ga0115572_10498466Not Available675Open in IMG/M
3300009507|Ga0115572_10673269Not Available566Open in IMG/M
3300009508|Ga0115567_10525297Not Available718Open in IMG/M
3300011248|Ga0151670_1085381Not Available650Open in IMG/M
3300011252|Ga0151674_1001152Not Available949Open in IMG/M
3300011253|Ga0151671_1002178Not Available3201Open in IMG/M
3300011254|Ga0151675_1038927Not Available890Open in IMG/M
3300011254|Ga0151675_1136124Not Available989Open in IMG/M
3300011258|Ga0151677_1057319Not Available758Open in IMG/M
3300014818|Ga0134300_1005773Not Available5530Open in IMG/M
3300017697|Ga0180120_10420346Not Available523Open in IMG/M
3300017709|Ga0181387_1106736Not Available574Open in IMG/M
3300017710|Ga0181403_1109055Not Available578Open in IMG/M
3300017728|Ga0181419_1105306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria692Open in IMG/M
3300017745|Ga0181427_1110432Not Available671Open in IMG/M
3300017748|Ga0181393_1159779Not Available558Open in IMG/M
3300017755|Ga0181411_1087972Not Available926Open in IMG/M
3300017757|Ga0181420_1220606Not Available545Open in IMG/M
3300017765|Ga0181413_1219598Not Available565Open in IMG/M
3300017769|Ga0187221_1115653All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium811Open in IMG/M
3300020165|Ga0206125_10121065Not Available1082Open in IMG/M
3300020185|Ga0206131_10316004Not Available691Open in IMG/M
3300020347|Ga0211504_1082543Not Available733Open in IMG/M
3300020352|Ga0211505_1026711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1474Open in IMG/M
3300020382|Ga0211686_10015493All Organisms → Viruses → Predicted Viral3205Open in IMG/M
3300020438|Ga0211576_10407704All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium695Open in IMG/M
3300020469|Ga0211577_10353636Not Available918Open in IMG/M
3300021375|Ga0213869_10011482Not Available5267Open in IMG/M
3300021375|Ga0213869_10075819Not Available1682Open in IMG/M
3300021375|Ga0213869_10333351Not Available638Open in IMG/M
3300022178|Ga0196887_1088156Not Available714Open in IMG/M
(restricted) 3300023109|Ga0233432_10100238All Organisms → Viruses → Predicted Viral1632Open in IMG/M
(restricted) 3300023109|Ga0233432_10103988All Organisms → cellular organisms → Bacteria1589Open in IMG/M
(restricted) 3300023109|Ga0233432_10457725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
(restricted) 3300024255|Ga0233438_10085756All Organisms → cellular organisms → Bacteria1475Open in IMG/M
(restricted) 3300024264|Ga0233444_10113049All Organisms → Viruses → Predicted Viral1390Open in IMG/M
3300025084|Ga0208298_1065653Not Available689Open in IMG/M
3300025099|Ga0208669_1114003Not Available553Open in IMG/M
3300025120|Ga0209535_1062545All Organisms → Viruses → Predicted Viral1508Open in IMG/M
3300025137|Ga0209336_10078847Not Available964Open in IMG/M
3300025138|Ga0209634_1026139Not Available3160Open in IMG/M
3300025276|Ga0208814_1020029Not Available2241Open in IMG/M
3300025276|Ga0208814_1044070Not Available1336Open in IMG/M
3300025276|Ga0208814_1109998Not Available678Open in IMG/M
3300025570|Ga0208660_1129561Not Available529Open in IMG/M
3300025632|Ga0209194_1100281Not Available734Open in IMG/M
3300025676|Ga0209657_1070488Not Available1162Open in IMG/M
3300025704|Ga0209602_1193707Not Available610Open in IMG/M
3300025751|Ga0208150_1204793All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium608Open in IMG/M
3300025870|Ga0209666_1261502All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300027668|Ga0209482_1160562Not Available654Open in IMG/M
3300027751|Ga0208304_10182185Not Available763Open in IMG/M
3300027753|Ga0208305_10055560Not Available1527Open in IMG/M
3300031143|Ga0308025_1190137Not Available707Open in IMG/M
3300031519|Ga0307488_10064272Not Available2783Open in IMG/M
3300031519|Ga0307488_10390263Not Available864Open in IMG/M
3300031519|Ga0307488_10401461All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium847Open in IMG/M
3300031597|Ga0302116_1159455Not Available694Open in IMG/M
3300031647|Ga0308012_10239200All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium715Open in IMG/M
3300031688|Ga0308011_10240145Not Available544Open in IMG/M
3300031695|Ga0308016_10165589Not Available865Open in IMG/M
3300031696|Ga0307995_1177485Not Available771Open in IMG/M
3300031703|Ga0308002_1110668Not Available585Open in IMG/M
3300033742|Ga0314858_137740Not Available626Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine14.81%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine10.19%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater8.33%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.41%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine7.41%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine6.48%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean5.56%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine5.56%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.56%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.56%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater4.63%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.78%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine2.78%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.78%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.78%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine2.78%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.85%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.93%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.93%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001952Marine microbial communities from Newport Harbor, Rhode Island, USA - GS008EnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004457Marine viral communities from Newfoundland, Canada MC-1EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007692Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743EnvironmentalOpen in IMG/M
3300007992Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2umEnvironmentalOpen in IMG/M
3300008961Estuarine microbial communities from the Columbia River estuary - metaG 1550B-02EnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009079Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009449Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426EnvironmentalOpen in IMG/M
3300009472Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300011248Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, 0.2EnvironmentalOpen in IMG/M
3300011252Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, permeateEnvironmentalOpen in IMG/M
3300011253Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeateEnvironmentalOpen in IMG/M
3300011254Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, 0.02EnvironmentalOpen in IMG/M
3300011258Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeateEnvironmentalOpen in IMG/M
3300014818Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0152 : 8 days incubationEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020347Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)EnvironmentalOpen in IMG/M
3300020352Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556084-ERR599144)EnvironmentalOpen in IMG/M
3300020382Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300024255 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MGEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025570Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025676Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025704Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027668Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027751Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)EnvironmentalOpen in IMG/M
3300027753Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)EnvironmentalOpen in IMG/M
3300031143Marine microbial communities from water near the shore, Antarctic Ocean - #422EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031597Marine microbial communities from Western Arctic Ocean, Canada - AG5_SCMEnvironmentalOpen in IMG/M
3300031637Marine microbial communities from Western Arctic Ocean, Canada - CBN3_32.1EnvironmentalOpen in IMG/M
3300031647Marine microbial communities from water near the shore, Antarctic Ocean - #179EnvironmentalOpen in IMG/M
3300031688Marine microbial communities from water near the shore, Antarctic Ocean - #177EnvironmentalOpen in IMG/M
3300031695Marine microbial communities from water near the shore, Antarctic Ocean - #233EnvironmentalOpen in IMG/M
3300031696Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262EnvironmentalOpen in IMG/M
3300031703Marine microbial communities from water near the shore, Antarctic Ocean - #34EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1003305423300000101MarineMPSVLYMTPEEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE*
DelMOSum2010_1014975833300000101MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENDAELTLQRKKAELTLQRKFKEQK*
DelMOSum2010_1024858013300000101MarineMTTEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCS
DelMOSum2010_1028152213300000101MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK*
DelMOSum2011_1017023713300000115MarineMTTEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK*
DelMOSum2011_1023046033300000115MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSV
DelMOWin2010_1009520443300000117MarineMNREEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE*
DelMOWin2010_1024900833300000117MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENL
JGI24005J15628_1009499433300001589MarineMNREEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDD*
JGI24005J15628_1012088323300001589MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE*
JGI24005J15628_1018848913300001589MarineMTAKELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE*
GOS2224_101910123300001952MarineMNSEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKE*
Ga0065861_110144513300004448MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYTHLYDKLETAENLRCSVKK*
Ga0066224_121469763300004457MarineMNREELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE*
Ga0070743_1008596243300005941EstuarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKE*
Ga0070743_1009771633300005941EstuarineMNREEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAVEKDE*
Ga0070743_1026770933300005941EstuarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKL
Ga0075466_104437013300006029AqueousMTTEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK*
Ga0075441_1012924933300006164MarineMSSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTYLDEKLEAAENEM*
Ga0098055_109050733300006793MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDKKLEAAENLRCSVKE*
Ga0075467_1008249763300006803AqueousTEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK*
Ga0075444_1006543223300006947MarineMSSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRSKNEM*
Ga0075468_1007921223300007229AqueousMTPEEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE*
Ga0102823_104502123300007692EstuarineMNREELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAVEKDE*
Ga0105748_1002608043300007992Estuary WaterMNREELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKE*
Ga0102887_114341213300008961EstuarineTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE*
Ga0102887_127668433300008961EstuarineEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTHLYDKLEAAENDAELTLQRKFKE
Ga0102811_109386443300009024EstuarineMNREELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAE
Ga0115566_1024299033300009071Pelagic MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYTHLYDKLEAAENEM*
Ga0115552_140517613300009077Pelagic MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRCSVKE*
Ga0102814_1006489673300009079EstuarineMTAEELELCGDRLDSVRDLLELLPNELGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK*
Ga0114915_106650043300009428Deep OceanMNREELELCGDRLDSVRDLLELLPNEIGSWKYTYWYKVYQYLDEKLEAAENLRSKNEM*
Ga0114915_111888423300009428Deep OceanMNSEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE*
Ga0114915_118145013300009428Deep OceanHMSSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTYLDEKLEAAEKDE*
Ga0115545_105096063300009433Pelagic MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTHLYDKLEAAENDAELTLQRKKAELTLQRKFKE*
Ga0115546_107969533300009435Pelagic MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK*
Ga0115556_113279513300009437Pelagic MarineHMTAEEIELCGDRLDSVRDLLELPPNEVGSWKYAYWYKVYTHLYDKLETAENIRCSVKK*
Ga0115556_117832243300009437Pelagic MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENDAELTLQRKKAEL
Ga0115557_125551833300009443Pelagic MarineTEYMTAEELELCGDRLDSVRDLLELLPNELGSWKYAYWYKVYTHLYDKLEAAENLRCSVKE*
Ga0115558_141454513300009449Pelagic MarineLELCGDRLDSVRDLLELLPNELGSWKYAYWYKVYTHLYDKLEAAENLRCSVKE*
Ga0115554_119441623300009472Pelagic MarineMTAEELELCGDRLDSVRDLLELLPNELGSWKYAYWYKVYTHLYDKLETAENLRCSVKK*
Ga0115554_131445223300009472Pelagic MarineMTAKELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRCSVKE*
Ga0115571_105338563300009495Pelagic MarineMTTEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENDAELTLQRKKAELTLQRKFKE*
Ga0115572_1049846623300009507Pelagic MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENDAELTLQRKKAELTLQRKFKE*
Ga0115572_1067326933300009507Pelagic MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTHLYDKL
Ga0115567_1052529713300009508Pelagic MarineCGDRLDSVRDLLELLPNELGSWKYAYWYKVYTHLYDKLEAAENLRCSVKE*
Ga0151670_108538123300011248MarineMTPEERALCGDRLDSVRDLLGLLPNEIGRWTYAYWYKVYQYLDEKLEAAEKDE*
Ga0151674_100115233300011252MarineMNREEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK*
Ga0151671_1002178113300011253MarineMTAKELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYKHLDEKLEAAENLRYSVNLRSKNEM*
Ga0151675_103892713300011254MarineLYTWSNKSTQSMNSEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE*
Ga0151675_113612433300011254MarineMTAEELELCGDRLDSVRDLLELLPNELGSWKYAYWYKVYTHLYDKLEAAENLRCSVKK*
Ga0151677_105731933300011258MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYTHLYDKLEAAENLRCSVKE*
Ga0134300_1005773103300014818MarineMTAEELELCGDRLDSVRDLLELLPNELGSWKYAYWYKVYTHLYDKLEAAENLRCSVKE*
Ga0180120_1042034613300017697Freshwater To Marine Saline GradientMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENDA
Ga0181387_110673613300017709SeawaterMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTHLYDKLEAAENDAELT
Ga0181403_110905523300017710SeawaterMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK
Ga0181419_110530633300017728SeawaterMTAEELELCGDRLDSVRDLLELLPNEIGSWKYTYWYKVYTHLYDKLEAAENDAEFTLQRKKAEFTLQRKFKE
Ga0181427_111043233300017745SeawaterDRLDSVRDLLELLPNEIGSWKYAYWYKVYTHLYDKLEAAENDAEFTLQRKKAEFTLQRKFKE
Ga0181393_115977913300017748SeawaterMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTHLYDKLEAAENDAELTLQRKKAELT
Ga0181411_108797213300017755SeawaterMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTHLYDKLEAAENDAELTLQRK
Ga0181420_122060633300017757SeawaterMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTHLYDKLEAAENDA
Ga0181413_121959813300017765SeawaterMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLR
Ga0187221_111565313300017769SeawaterMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRYSVKE
Ga0206125_1012106533300020165SeawaterMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENDAELTLQRKKAELTLQRKFKE
Ga0206131_1031600423300020185SeawaterMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYTHLYDKLETAENLRCSVKK
Ga0211504_108254313300020347MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTHLYDKLEAAENLRCSVKE
Ga0211505_102671143300020352MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKE
Ga0211686_1001549373300020382MarineMSSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTYLDEKLEAAENEM
Ga0211576_1040770433300020438MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRCSVKE
Ga0211577_1035363623300020469MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTHLYDKLEAAENDAELTLQRKKAELTLQRKFKE
Ga0213869_10011482143300021375SeawaterMNREELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE
Ga0213869_1007581933300021375SeawaterMTTEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK
Ga0213869_1033335123300021375SeawaterMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENDAELTLQRKKAELTLQRKFKEQK
Ga0196887_108815623300022178AqueousRAEHMTTEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK
(restricted) Ga0233432_1010023823300023109SeawaterMNREELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAVEKDE
(restricted) Ga0233432_1010398843300023109SeawaterMNREELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK
(restricted) Ga0233432_1045772523300023109SeawaterMTAEELELCGDRLDSVRDLLELLPNELGSWKYAYWYKVYTHLYDKLEAAENLRCSVKE
(restricted) Ga0233438_1008575653300024255SeawaterMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAEN
(restricted) Ga0233444_1011304923300024264SeawaterMNRKELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE
Ga0208298_106565313300025084MarineCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKE
Ga0208669_111400323300025099MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRYSVKE
Ga0209535_106254553300025120MarineMTAKELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE
Ga0209336_1007884733300025137MarineMTAEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE
Ga0209634_102613963300025138MarineMTTEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK
Ga0208814_102002953300025276Deep OceanMNREELELCGDRLDSVRDLLELLPNEIGSWKYTYWYKVYQYLDEKLEAAENLRSKNEM
Ga0208814_104407043300025276Deep OceanMNSEELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE
Ga0208814_110999833300025276Deep OceanMSSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTYLDEKLEAAEKDE
Ga0208660_112956123300025570AqueousMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKK
Ga0209194_110028133300025632Pelagic MarineMTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYTHLYDKLEAAENEM
Ga0209657_107048813300025676MarineMPSVLYMTPEEIELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKE
Ga0209602_119370723300025704Pelagic MarineAEELELCGDRLDSVRDLLELLPNELGSWKYAYWYKVYTHLYDKLEAAENLRCSVKE
Ga0208150_120479313300025751AqueousMNREELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKL
Ga0209666_126150223300025870MarineMPSVLYMTPEEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE
Ga0209482_116056233300027668MarineMSSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAENLRSKNEM
Ga0208304_1018218523300027751EstuarineMNREEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAVEKDE
Ga0208305_1005556073300027753EstuarineTAEELELCGDRLDSVRDLLELLPNEVGSWKYAYWYKVYQYLDEKLEAAENLRCSVKE
Ga0308025_119013713300031143MarineQHMSSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTYLDEKLEAAENEM
Ga0307488_1006427283300031519Sackhole BrineMNREELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDD
Ga0307488_1039026313300031519Sackhole BrineNKSTQSMNREELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE
Ga0307488_1040146143300031519Sackhole BrineMNREEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAE
Ga0302116_115945523300031597MarineMNREEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDESVYM
Ga0302138_1025591513300031637MarineMNREEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDE
Ga0308012_1023920043300031647MarineMSSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTYLDEKLEAAEKNE
Ga0308011_1024014523300031688MarineDTQHMSSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTYLDEKLEAAEKNE
Ga0308016_1016558943300031695MarineHMSLQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTYLDEKLEAAEKDE
Ga0307995_117748523300031696MarineMSSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE
Ga0308002_111066813300031703MarineSQELELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYTYLDEKLEAAEKNE
Ga0314858_137740_465_6263300033742Sea-Ice BrineMNREEIELCGDRLDSVRDLLELLPNEIGSWKYAYWYKVYQYLDEKLEAAEKDE


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