NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090868

Metagenome Family F090868

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090868
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 51 residues
Representative Sequence MSLEETKKLYHKLVRQGVINKDIQMKEVKKMFHDVSKYNAKEDLKKIYEKK
Number of Associated Samples 70
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 17.59 %
% of genes near scaffold ends (potentially truncated) 18.52 %
% of genes from short scaffolds (< 2000 bps) 84.26 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (37.963 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(57.407 % of family members)
Environment Ontology (ENVO) Unclassified
(97.222 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(80.556 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.84%    β-sheet: 0.00%    Coil/Unstructured: 53.16%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF00856SET 57.41
PF11753DUF3310 0.93
PF12705PDDEXK_1 0.93
PF02945Endonuclease_7 0.93



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.04 %
UnclassifiedrootN/A37.96 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001683|GBIDBA_10118396All Organisms → cellular organisms → Bacteria → Proteobacteria762Open in IMG/M
3300001727|JGI24529J20061_107933Not Available536Open in IMG/M
3300001743|JGI24515J20084_1013017All Organisms → Viruses751Open in IMG/M
3300002511|JGI25131J35506_1003343All Organisms → cellular organisms → Bacteria2312Open in IMG/M
3300002511|JGI25131J35506_1008967All Organisms → cellular organisms → Bacteria1387Open in IMG/M
3300002511|JGI25131J35506_1009112All Organisms → Viruses1376Open in IMG/M
3300002511|JGI25131J35506_1009169All Organisms → cellular organisms → Bacteria1372Open in IMG/M
3300002511|JGI25131J35506_1015957All Organisms → cellular organisms → Bacteria → Proteobacteria1033Open in IMG/M
3300002518|JGI25134J35505_10031789All Organisms → Viruses1476Open in IMG/M
3300002518|JGI25134J35505_10051019Not Available1038Open in IMG/M
3300002519|JGI25130J35507_1027383All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium1252Open in IMG/M
3300002519|JGI25130J35507_1031870All Organisms → Viruses1129Open in IMG/M
3300002760|JGI25136J39404_1003022Not Available2780Open in IMG/M
3300002760|JGI25136J39404_1017994All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300002760|JGI25136J39404_1029798All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300002760|JGI25136J39404_1047376All Organisms → cellular organisms → Bacteria → Proteobacteria796Open in IMG/M
3300002760|JGI25136J39404_1054934All Organisms → cellular organisms → Bacteria → Proteobacteria738Open in IMG/M
3300002760|JGI25136J39404_1068942All Organisms → cellular organisms → Bacteria → Proteobacteria659Open in IMG/M
3300003542|FS900DNA_10432871All Organisms → Viruses1183Open in IMG/M
3300003690|PicViral_1001136Not Available10363Open in IMG/M
3300003702|PicMicro_10025692All Organisms → cellular organisms → Bacteria4084Open in IMG/M
3300006164|Ga0075441_10349043Not Available538Open in IMG/M
3300006308|Ga0068470_1054871All Organisms → Viruses746Open in IMG/M
3300006310|Ga0068471_1291247All Organisms → Viruses1638Open in IMG/M
3300006310|Ga0068471_1574997All Organisms → Viruses994Open in IMG/M
3300006340|Ga0068503_10484720Not Available664Open in IMG/M
3300006340|Ga0068503_10539013All Organisms → Viruses1377Open in IMG/M
3300006738|Ga0098035_1027178All Organisms → Viruses2192Open in IMG/M
3300006750|Ga0098058_1053734Not Available1131Open in IMG/M
3300006751|Ga0098040_1172237All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300006751|Ga0098040_1229705All Organisms → Viruses539Open in IMG/M
3300006753|Ga0098039_1054292All Organisms → Viruses1399Open in IMG/M
3300006754|Ga0098044_1028952All Organisms → Viruses2441Open in IMG/M
3300006789|Ga0098054_1163401All Organisms → Viruses819Open in IMG/M
3300006900|Ga0066376_10229718All Organisms → Viruses1103Open in IMG/M
3300006900|Ga0066376_10725286Not Available544Open in IMG/M
3300006923|Ga0098053_1050404All Organisms → Viruses861Open in IMG/M
3300008050|Ga0098052_1023802All Organisms → Viruses2871Open in IMG/M
3300008050|Ga0098052_1129522Not Available1010Open in IMG/M
3300008216|Ga0114898_1181280Not Available594Open in IMG/M
3300008217|Ga0114899_1013780All Organisms → Viruses3279Open in IMG/M
3300008217|Ga0114899_1208483Not Available617Open in IMG/M
3300009413|Ga0114902_1012718All Organisms → Viruses2865Open in IMG/M
3300009595|Ga0105214_123484All Organisms → Viruses516Open in IMG/M
3300009603|Ga0114911_1154276Not Available643Open in IMG/M
3300009605|Ga0114906_1178177Not Available721Open in IMG/M
3300009622|Ga0105173_1028123Not Available880Open in IMG/M
3300010151|Ga0098061_1122742All Organisms → Viruses955Open in IMG/M
3300017702|Ga0181374_1028323All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon984Open in IMG/M
3300017702|Ga0181374_1037607All Organisms → Viruses → environmental samples → uncultured virus840Open in IMG/M
3300017703|Ga0181367_1022605Not Available1139Open in IMG/M
3300017718|Ga0181375_1027446All Organisms → Viruses970Open in IMG/M
3300017775|Ga0181432_1033857All Organisms → Viruses1381Open in IMG/M
3300017775|Ga0181432_1089708All Organisms → Viruses906Open in IMG/M
3300017775|Ga0181432_1139654All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria740Open in IMG/M
3300021442|Ga0206685_10168289All Organisms → Viruses734Open in IMG/M
(restricted) 3300024517|Ga0255049_10065429Not Available1646Open in IMG/M
(restricted) 3300024518|Ga0255048_10166396All Organisms → Viruses1080Open in IMG/M
(restricted) 3300024518|Ga0255048_10551113Not Available557Open in IMG/M
(restricted) 3300024520|Ga0255047_10282130Not Available841Open in IMG/M
3300025044|Ga0207891_1044557Not Available522Open in IMG/M
3300025046|Ga0207902_1021854All Organisms → Viruses755Open in IMG/M
3300025046|Ga0207902_1022631All Organisms → Viruses744Open in IMG/M
3300025046|Ga0207902_1031655Not Available648Open in IMG/M
3300025049|Ga0207898_1025935All Organisms → Viruses744Open in IMG/M
3300025052|Ga0207906_1004777All Organisms → Viruses2007Open in IMG/M
3300025052|Ga0207906_1010896All Organisms → Viruses1278Open in IMG/M
3300025069|Ga0207887_1017498Not Available1124Open in IMG/M
3300025072|Ga0208920_1004917All Organisms → Viruses3146Open in IMG/M
3300025072|Ga0208920_1017621Not Available1558Open in IMG/M
3300025082|Ga0208156_1098032Not Available528Open in IMG/M
3300025096|Ga0208011_1026356All Organisms → Viruses1452Open in IMG/M
3300025112|Ga0209349_1013858All Organisms → Viruses3008Open in IMG/M
3300025118|Ga0208790_1097107Not Available861Open in IMG/M
3300025122|Ga0209434_1024321All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2033Open in IMG/M
3300025122|Ga0209434_1189520All Organisms → Viruses539Open in IMG/M
3300025125|Ga0209644_1001147Not Available4872Open in IMG/M
3300025125|Ga0209644_1004658Not Available2725Open in IMG/M
3300025125|Ga0209644_1147096Not Available562Open in IMG/M
3300025131|Ga0209128_1143138All Organisms → Viruses723Open in IMG/M
3300025133|Ga0208299_1019679All Organisms → Viruses3025Open in IMG/M
3300025133|Ga0208299_1080727All Organisms → Viruses1142Open in IMG/M
3300025244|Ga0207908_1048685Not Available524Open in IMG/M
3300025259|Ga0207876_1031174All Organisms → Viruses750Open in IMG/M
3300025270|Ga0208813_1092095Not Available614Open in IMG/M
3300025280|Ga0208449_1144975Not Available519Open in IMG/M
3300025873|Ga0209757_10027568All Organisms → Viruses1607Open in IMG/M
3300025873|Ga0209757_10033225Not Available1477Open in IMG/M
3300025873|Ga0209757_10098418Not Available894Open in IMG/M
3300025873|Ga0209757_10167375Not Available691Open in IMG/M
3300025873|Ga0209757_10169007All Organisms → Viruses688Open in IMG/M
3300025873|Ga0209757_10284252All Organisms → Viruses526Open in IMG/M
3300028018|Ga0256381_1009042Not Available1609Open in IMG/M
3300028022|Ga0256382_1150977All Organisms → Viruses557Open in IMG/M
3300028039|Ga0256380_1032004Not Available839Open in IMG/M
3300031801|Ga0310121_10727120Not Available524Open in IMG/M
3300031802|Ga0310123_10562408All Organisms → Viruses710Open in IMG/M
3300031811|Ga0310125_10176220Not Available1103Open in IMG/M
3300031886|Ga0315318_10746777All Organisms → Viruses548Open in IMG/M
3300032278|Ga0310345_10009264Not Available8357Open in IMG/M
3300032278|Ga0310345_10209338All Organisms → Viruses1771Open in IMG/M
3300032278|Ga0310345_11131554Not Available766Open in IMG/M
3300032278|Ga0310345_11688816Not Available618Open in IMG/M
3300032820|Ga0310342_102653186All Organisms → Viruses599Open in IMG/M
3300034628|Ga0326755_007267All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium1038Open in IMG/M
3300034628|Ga0326755_015846All Organisms → Viruses726Open in IMG/M
3300034629|Ga0326756_019510Not Available791Open in IMG/M
3300034654|Ga0326741_008530All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → unclassified Acidiferrobacteraceae → Acidiferrobacteraceae bacterium1971Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine57.41%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean9.26%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater4.63%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine4.63%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.70%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater3.70%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.78%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.78%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.78%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic1.85%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.85%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.93%
Diffuse Hydrothermal Flow Volcanic VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent0.93%
Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume0.93%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Marine, Hydrothermal Vent Plume0.93%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001683Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assemblyEnvironmentalOpen in IMG/M
3300001727Marine viral communities from the Pacific Ocean - LP-55EnvironmentalOpen in IMG/M
3300001743Marine viral communities from the Pacific Ocean - LP-38EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002519Marine viral communities from the Pacific Ocean - ETNP_2_300EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300003542Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNAEnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300003702Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Microbial AssemblyEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300009413Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12EnvironmentalOpen in IMG/M
3300009595Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500EnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300017702Marine viral communities from the Subarctic Pacific Ocean - Lowphox_10 viral metaGEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017718Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025044Marine viral communities from the Pacific Ocean - LP-50 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025049Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025244Marine viral communities from the Deep Pacific Ocean - MSP-81 (SPAdes)EnvironmentalOpen in IMG/M
3300025259Marine viral communities from the Deep Pacific Ocean - MSP-146 (SPAdes)EnvironmentalOpen in IMG/M
3300025270Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes)EnvironmentalOpen in IMG/M
3300025280Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300028018Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 1600mEnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300028039Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300mEnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031802Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057EnvironmentalOpen in IMG/M
3300031811Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8EnvironmentalOpen in IMG/M
3300031886Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034628Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2961EnvironmentalOpen in IMG/M
3300034629Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GBIDBA_1011839623300001683Hydrothermal Vent PlumeMSLQQTKQLYHKLVKQGVINKDIQMKEVKKMFHDVSKYNAKEDIKKLYEKK*
JGI24529J20061_10793313300001727MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKLFNNVFKYNAKEDVKKIYEKK*
JGI24515J20084_101301713300001743MarineMSLEETKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDVKKLYEK
JGI25131J35506_100334343300002511MarineMSLEKTKKLYRKLVRQGVINKDIQMKEVKKIFHKNLFMDSILESASKYNAKKDLKKLYEKK*
JGI25131J35506_100896753300002511MarineMKKNKQLYHQLIKKGVINKNIQMKEINNLLHDMKKYNAKEDINKIYEKK*
JGI25131J35506_100911243300002511MarineMTKKIKQLYHQLIKKGVISKDIQVKKIKNLFRDMKKYNAKEDVNKIYEERKRN*
JGI25131J35506_100916953300002511MarineMSLEETKKLYHKLVRQGVINKDIQMKEVKKLFNNIFKYNAKEDLKKLYEKK*
JGI25131J35506_101595723300002511MarineMSLEETKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDIKKLYEKK*
JGI25134J35505_1003178923300002518MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKMFHGVSKYNAKXDXXKIYEKIK*
JGI25134J35505_1005101913300002518MarineYHKLVKQGVINKDIQMKEVKKMFHNVSKYNAKKDLKKIYEKK*
JGI25130J35507_102738333300002519MarineMKNTKQLYHKLVKRGIINKDIQMKEVKKMFHGVSKYNAKGDIKKIYDKRNNK*
JGI25130J35507_103187033300002519MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKMFHGVSKYNAKGDIK
JGI25136J39404_100302253300002760MarineMKNTKQLYHKLVKRGIINKDIQMKEVKKMFHDVSKYNAKEDLKKIYEKK*
JGI25136J39404_101799433300002760MarineMSLXETKKLYHKLVXQGVINKDIQMKEVKKLFNNVFKYNAKEDIKKLYEKK
JGI25136J39404_102979813300002760MarineMSLEKTKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDKI
JGI25136J39404_104737623300002760MarineMSLEETKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDVKKLYEKK*
JGI25136J39404_105493443300002760MarineMSLEETKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDVEKLYEKK*
JGI25136J39404_106894223300002760MarineMSLEETKKLYHKLVRQGVINKDIQMEEVKKLFNNVFKYNAKEDIKKLYEKK*
FS900DNA_1043287133300003542Diffuse Hydrothermal Flow Volcanic VentMTKKTKQLYHHLIKKGVINKDIQMKKLKKLFHGMKKYNAKEDVNKI*
PicViral_1001136103300003690Marine, Hydrothermal Vent PlumeMEKSMKNTEQLYHRLVKRGIINKDIQMKEIKKLIDDVSKYNAKEDVRKIHEKK*
PicMicro_10025692103300003702Marine, Hydrothermal Vent PlumeMNLKKTKQLYHQLVKKGVINKDIQMKEIKKLFHDVKKYNAKKDVNKI*
Ga0075441_1034904323300006164MarineMSLQKTKQLYHKLVKQGVINKDIQMKEVKKMFHDVSKYNAKEDIKKLYEKK*
Ga0068470_105487123300006308MarineMSLKKTKQLYHKLVKEGVINKDIQMKAVKELFHDLKKYNAERDVNKIYEKRNRN*
Ga0068471_129124743300006310MarineMTKKIKQLYHQLIKKGVISKDIQTKEIKNLFRDMKKYNAKEDVNKIYEERKN*
Ga0068471_157499723300006310MarineMSLKKTKQLYHKLVKKGVINKDIQMKVVKELFHDLKKYNAERDVNKIYEERNRN*
Ga0068503_1048472023300006340MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKLFNSVFKYNAKEDVKKLYEKNK*
Ga0068503_1053901333300006340MarineMSLEETKKLYHKLVRQGVINKDIQMKKVKKMFHDVSKYNAKEDIKKLYEKK*
Ga0098035_102717823300006738MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKMFHGVSKYNAKGDIKKIYEKIK*
Ga0098058_105373433300006750MarineMVKERIMSLEETTKLYHKLVKQGVINKDIQMKEVKKMFHGVSKYNAKGDI
Ga0098040_117223723300006751MarineMSLEETKKLYHKLVKQGVINKDIQMKEVKKMFHNVSKYNAKEDWKKLNEKK*
Ga0098040_122970523300006751MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKMFHNVSKYNAKEDLKKLNEK
Ga0098039_105429223300006753MarineMSLEETKKLYHKLVKQGVINKDIQMKEVKKMFHNVSKYNAKKDLKKIYEKK*
Ga0098044_102895273300006754MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKMFHGVSKYNAKEDVEKIYEKIK*
Ga0098054_116340123300006789MarineMSLEETKKLYHKLVRQGIINKDIQMKEVKKMFHNVSKYNAKKDLKKIYEKK*
Ga0066376_1022971823300006900MarineMNLKKTKQLYHQLVKKGVINKDIQMKEIKKLFHDVKKYNAKKDVNKIYEERKN*
Ga0066376_1072528623300006900MarineMEKSMKNTKQLYHRLVKRGIINKDIQMKEVKKMFHDVSKYNAKEDLKKIYEKIQ*
Ga0098053_105040413300006923MarineMSLEETKKLYHKLVKQGVINKDIQMKEVKKMFKNTSFLNASRYNAKKDLKKLNKITIT
Ga0098052_102380273300008050MarineMSLKETKKLYHKLVKQGVINEGIQMKEIKKMFKNTSFNNVSRYNAKKDLKKIHEKK*
Ga0098052_112952233300008050MarineMVKERIMSLEETKKLYHKLVKQGVINKDIQMKEVKKMFHGVSKYNAKGDIKKIYD
Ga0114898_118128013300008216Deep OceanMIDFEKNQEETKKLYHKLVKKGVINKDIQMKEVKKMFHNVSKYNAKED
Ga0114899_1013780103300008217Deep OceanMKINKKLYYQLVKKGVINKDIQLKEIKNLFHDMKKYNAKEDINKIYENI*
Ga0114899_120848333300008217Deep OceanMIDFEKDQEETKKLYHKLVKKGVINKDIQMKEVKKLFNNVFKYNAK
Ga0114902_101271893300009413Deep OceanMKINKKLYHQLIKKGVINKDIQLKEIKNLFHDMKKYNAKEDINKIYENI*
Ga0105214_12348423300009595Marine OceanicMTKKTKQLYHKLIKEGVINKNIQMKEIKNLFHNMKKYNAKEDINKIYEERKRN*
Ga0114911_115427623300009603Deep OceanMSSIDFEKDQEETKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDVKKLYEKK*
Ga0114906_117817743300009605Deep OceanMKINKKLYHQLIKKGVINKDILLKEIKNLFRDMKKYNAKEDINKIYEKK*
Ga0105173_102812323300009622Marine OceanicMTKKIKQLYHQLIKKGVINKNIRMKEIKNLFHDMKKYNAKEDVNKIYEERKRN*
Ga0098061_112274223300010151MarineMSLEETKKLNHKLVKKGVINKDIQMKEVKKMFHGVSKYNAKEDVEKIYAKIK*
Ga0181374_102832333300017702MarineMKNTKQLYHKLVKRGIINKDIQMKEVKKMFHGVSKYNAKGDIKKINIVGCLLKILKN
Ga0181374_103760723300017702MarineMVKERIMSLEETKKLYHKLVKQGIINKDIQMKEVKKMFHGVSKYNAKGDIK
Ga0181367_102260533300017703MarineMVKERIMSLEETKKLYHKLVKQGVINKDIQMKEVKKMFHGVSKYNAKGDIKKIYDKR
Ga0181375_102744633300017718MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKMFHGVSKYNAKGDIKKIYD
Ga0181432_103385733300017775SeawaterMSLKKTKQLYHKLVKKGVINKDIQMKAVKELFHDLKKYNAERDVNKIYEERKRN
Ga0181432_108970833300017775SeawaterMSLEKTKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDVKKLYEKIK
Ga0181432_113965423300017775SeawaterMSLEETKKLYHKLVKKGVINKDIQMKEVKKMFHDVSKYNAKEDLKKLYEKIK
Ga0206685_1016828923300021442SeawaterMSLEATKKLYHKLVRQGVINKDIQMKEVKKMFHDVSKYNAKEDIKKLYEKK
(restricted) Ga0255049_1006542923300024517SeawaterMSLQETKKLYHKLVRQGVINKDIQMKEVKKMFHNVSKYNAKEDLKKLYEKK
(restricted) Ga0255048_1016639633300024518SeawaterMSLQETKKLYHKLVKQGVINKDIQMKEVKKMFHDVSKYNAKEDLKKLNEKIK
(restricted) Ga0255048_1055111313300024518SeawaterMSSIDFEKDQEETKKLYHKLVKKGVINKDIQMKEVKKMFHNVSRYNAKKD
(restricted) Ga0255047_1028213033300024520SeawaterMSLKETKKLYNKLVKQGVINKDIQMKEVKKMFHDVSKYNAKEDLKKLNEKIK
Ga0207891_104455723300025044MarineMSLEETKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDVKKLYEKK
Ga0207902_102185423300025046MarineMTQKIKQLYHQLIKKGVISKDIQTKEIKNLFRDMKKYNAKEDVNKIYEERKRN
Ga0207902_102263123300025046MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKLFNNVFKYNAKEDVKKIYEKK
Ga0207902_103165523300025046MarineMKNTKQLYHRLVKRGIINKDIQMKEVKKMFHDVSKYNAKEDLKKIYEKI
Ga0207898_102593513300025049MarineMSLEKTKKLYHKLVKQGVINKDIQMKEVKKMFHDVSKYNAKEDLKKIYEKI
Ga0207906_100477723300025052MarineMSLEETKKLYHKLVRQGVINKDIQMKEVKKLFNNVSKYNAKEDLKKIYEKK
Ga0207906_101089623300025052MarineMSLQQTKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDVKKLYEKK
Ga0207887_101749833300025069MarineMSLEKTKKLYRKLVRQGVINKDIQMKEVKKIFHKNLFMDSILESASKYNAKKDLKKLYEK
Ga0208920_1004917103300025072MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKMFHGVSKYNAKGDIKKIYEKIK
Ga0208920_101762143300025072MarineMVKERIMSLEETKKLYHKLVKQGVINKDIQMKEVKKMFHGVSKYNAKGDIKKIYDKRNNK
Ga0208156_109803213300025082MarineMVKERIMSLEETKKLYHKLVKQGIINKDIQMKEVKKMFHGVSKYNAKGDIKKIYDKRNNK
Ga0208011_102635623300025096MarineMSLEETKKLYHKLVKQGVINKDIQMKEVKKMFHNVSKYNAKKDLKKIYEKK
Ga0209349_1013858103300025112MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKMFHGVSKYNAKEDVEKIYEKIK
Ga0208790_109710723300025118MarineMSLEKTKKLYHKLVRQGIINKDIQMKEVKKMFHNVSKYNAKKDLKKIYEKK
Ga0209434_102432163300025122MarineMKNTKQLYHKLVKRGIINKDIQMKEVKKMFHGVSKYNAKGDIKKIYDKRNNK
Ga0209434_118952013300025122MarineMGLEETKKLYHKLVKKGIINKDIQMKEVKKLFNNVFKYNAKEDVKKLYEKK
Ga0209644_100114773300025125MarineMSLQETKKLYHKLVKQGVINKDIQMKEVKKLFNNVFKYNAKEDIKKLYEKK
Ga0209644_100465853300025125MarineMKNTKQLYHKLVKRGIINKDIQMKEVKKMFHDVSKYNAKEDLKKIYEKK
Ga0209644_114709623300025125MarineMKKNKKLYRQLVKKGVINKDIQVKEIKNLFHDMKKYSAKEDINKIYEKK
Ga0209128_114313813300025131MarineMSLEETKKLYHKLVKQGVINKDIQMKEVKKMFHNVSKYNAKEDWKKLNEKK
Ga0208299_101967963300025133MarineMSLKETKKLYHKLVKQGVINEGIQMKEIKKMFKNTSFNNVSRYNAKKDLKKIHEKK
Ga0208299_108072743300025133MarineMSLEETKKLYHKLVRQGIINKDIQMKEVKKMFHNVSKYNAKKDLKKIYEKK
Ga0207908_104868523300025244Deep OceanMKKNKQLYHQLVKKGVINKDIQVKEIKNLLHDMKKYNAKEDINKIYEKK
Ga0207876_103117433300025259Deep OceanMNLKKTKQLYHQLVKKGVINKDIQMKEIKKLFHNVKKYNAKKDVNKI
Ga0208813_109209523300025270Deep OceanMSSIDFEKDQEETKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDVKKLYEKK
Ga0208449_114497513300025280Deep OceanMSSIDFEKDQEETKKLYHKLVKKGVINKDIQMKEVKKMFHDVSKYNAKEDV
Ga0209757_1002756823300025873MarineMSLEETKKLYHKLVRQGVINKDIQMEEVKKLFNNVFKYNAKEDIKKLYEKK
Ga0209757_1003322523300025873MarineMSLQETKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDIKKLYEKK
Ga0209757_1009841823300025873MarineMTLKETKKLYHKLVRQGVINKDIQMKEVKKLFNNVSKYNAKEDLKKIYEKK
Ga0209757_1016737523300025873MarineMSLEETKKLYHKLVRQGVINKDIQMKEVKKLFNSVFKYNAKEDVKKLYEKK
Ga0209757_1016900733300025873MarineMSLEETKKLYHKLVRQGVINKDIQMKEVKKLFNNIFKYNAKEDL
Ga0209757_1028425223300025873MarineMSLEETKKLYHKLVKKGVINKDIQMKEVKKMFHDVSKYNAKEDLKKIYEKI
Ga0256381_100904233300028018SeawaterMKINKKLYHQLIKKGVINKDILLKEIKNLFRDMKKYNAKEDINKIYEKK
Ga0256382_115097723300028022SeawaterMSLEKTKKLYHKLVRQGVINKDIQMKEVKKIFHNVSKYNAKEDLKKLNEKIK
Ga0256380_103200423300028039SeawaterMSSIDFEKDQEETKKLYHKLVRQGVINKDIQMKEVKKMFHNVSRYNAKKDLKKIYEKK
Ga0310121_1072712023300031801MarineMTKKTKQLYHQLIKKGVINKNIQIKELKKLFHNMKKYNAKEDINKIYDERKN
Ga0310123_1056240833300031802MarineMTKKTEQLYHKLIKEGVINKDIQMKEIKNLFHDMKKYNAEEDVNKIYEERKN
Ga0310125_1017622033300031811MarineMKNTKQLYHKLVKRGIINKDIQMKEVKKIFHDVSKYNAKEDLKKIYEKK
Ga0315318_1074677723300031886SeawaterMSLEETKKLYHKLVRQGVINKDIQMKEVKKLFNNVFKYNAKEDLKKLNEKK
Ga0310345_1000926433300032278SeawaterMSLKKTKQLYHKLVKEGVINKDIQMKAVKELFHDLKKYNAERDVNKIYEKRNRN
Ga0310345_1020933833300032278SeawaterMTKKIKQLYHQLIKKGVISKDIQTKEIKNLFRDMKKYNAKEDVNKIYEERKN
Ga0310345_1113155423300032278SeawaterMKNTKQLYHKLVKKGIINKDIQMKEVKKMFHDVSKYNAKEDLKKLYEKK
Ga0310345_1168881623300032278SeawaterLYHKLVRQGVINKDIQMKEVKKMFHDVSKYNAKEDIKKLYEKK
Ga0310342_10265318623300032820SeawaterMSLEETKKLYHKLVRQGVINKDIQMKEVKKIFHDVSKYNAKEDIKKIYEKK
Ga0326755_007267_272_4213300034628Filtered SeawaterMKKNKKLYHQLVKKGVINKDMQMKEIKNLFHDMKKYNAKEDINKIYEKK
Ga0326755_015846_135_2903300034628Filtered SeawaterMSLEETKKLYHKLVRQGVINKDIQMKEVKKMFHDVSKYNAKEDLKKIYEKK
Ga0326756_019510_61_2223300034629Filtered SeawaterMTKKIKQLYHQLIKKGVISKDIQVKKIKNLFRDMKKYNAKEDVNKIYEKRKRN
Ga0326741_008530_1641_17903300034654Filtered SeawaterMKNTKQLYHRLVKRGIINKDIQMKEVKKMFHDVSKYNAKEDVEKLYEKK


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