Metagenome Family F090863

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090863
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	159 residues
Representative Sequence	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAADSKRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRAEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY
Number of Associated Samples	85
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.37 %
% of genes near scaffold ends (potentially truncated)	37.96 %
% of genes from short scaffolds (< 2000 bps)	68.52 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.556 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (58.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.963 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.50% β-sheet: 9.37% Coil/Unstructured: 28.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF10412	TrwB_AAD_bind	49.07
PF03389	MobA_MobL	4.63
PF00437	T2SSE	4.63
PF00436	SSB	0.93
PF08241	Methyltransf_11	0.93
PF03743	TrbI	0.93
PF07690	MFS_1	0.93
PF13231	PMT_2	0.93
PF04610	TrbL	0.93
PF16694	Cytochrome_P460	0.93
PF03524	CagX	0.93
PF00005	ABC_tran	0.93
PF03069	FmdA_AmdA	0.93
PF00484	Pro_CA	0.93
PF04335	VirB8	0.93
PF00156	Pribosyltran	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0507	ATPase/5Ã¢â‚¬â„¢-3Ã¢â‚¬â„¢ helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	4.63
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.93
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.93
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.93
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.93
COG3504	Type IV secretory pathway, VirB9 components	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG3704	Type IV secretory pathway, VirB6 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG3736	Type IV secretory pathway, component VirB8	Intracellular trafficking, secretion, and vesicular transport [U]	0.93
COG3846	Type IV secretory pathway, TrbL components	Intracellular trafficking, secretion, and vesicular transport [U]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.56 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.56 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.56 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.56 %
Unclassified	root	N/A	19.44 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	30.56 %
Unclassified	root	N/A	19.44 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.19 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.85 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	22.22 %
Unclassified	root	N/A	19.44 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	4.63 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	3.70 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.85 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	22.22 %
Unclassified	root	N/A	19.44 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	4.63 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	3.70 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.85 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	22.22 %
Unclassified	root	N/A	19.44 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	4.63 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	3.70 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1.85 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	22.22 %
Unclassified	root	N/A	19.44 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3.70 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	3.70 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	0.93 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	22.22 %
Unclassified	root	N/A	19.44 %
Sphingomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	3.70 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3.70 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003316\|rootH1_10024894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6150	Open in IMG/M
3300003323\|rootH1_10302722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1469	Open in IMG/M
3300004081\|Ga0063454_100142790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1249	Open in IMG/M
3300005238\|Ga0073692_1008836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1859	Open in IMG/M
3300005260\|Ga0074072_1000018	All Organisms → cellular organisms → Bacteria → Proteobacteria	97659	Open in IMG/M
3300005330\|Ga0070690_100133220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	1680	Open in IMG/M
3300005332\|Ga0066388_100136804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3006	Open in IMG/M
3300005332\|Ga0066388_102397164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	957	Open in IMG/M
3300005335\|Ga0070666_10020078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4317	Open in IMG/M
3300005340\|Ga0070689_100677414	All Organisms → cellular organisms → Bacteria → Proteobacteria	899	Open in IMG/M
3300005355\|Ga0070671_101656285	Not Available	567	Open in IMG/M
3300005367\|Ga0070667_101198784	Not Available	711	Open in IMG/M
3300005437\|Ga0070710_11494200	Not Available	507	Open in IMG/M
3300005455\|Ga0070663_100050700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	2953	Open in IMG/M
3300005535\|Ga0070684_100271033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1554	Open in IMG/M
3300005539\|Ga0068853_100554867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1088	Open in IMG/M
3300005548\|Ga0070665_100019627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	6784	Open in IMG/M
3300005617\|Ga0068859_100011873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	8751	Open in IMG/M
3300005618\|Ga0068864_102394128	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300005719\|Ga0068861_101140932	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300005842\|Ga0068858_100006768	All Organisms → cellular organisms → Bacteria → Proteobacteria	11150	Open in IMG/M
3300006165\|Ga0075443_10077011	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300006358\|Ga0068871_101280130	Not Available	689	Open in IMG/M
3300006638\|Ga0075522_10281622	All Organisms → cellular organisms → Bacteria → Proteobacteria	811	Open in IMG/M
3300006954\|Ga0079219_11883140	Not Available	564	Open in IMG/M
3300009093\|Ga0105240_10145270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	2831	Open in IMG/M
3300009093\|Ga0105240_10346814	Not Available	1685	Open in IMG/M
3300009093\|Ga0105240_10793291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1026	Open in IMG/M
3300009101\|Ga0105247_10008616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6215	Open in IMG/M
3300009174\|Ga0105241_11037591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	769	Open in IMG/M
3300009177\|Ga0105248_12281710	Not Available	616	Open in IMG/M
3300009545\|Ga0105237_10039927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4735	Open in IMG/M
3300009545\|Ga0105237_10480520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1249	Open in IMG/M
3300009551\|Ga0105238_10180732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2086	Open in IMG/M
3300009551\|Ga0105238_11049915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	836	Open in IMG/M
3300009553\|Ga0105249_11297799	Not Available	799	Open in IMG/M
3300010362\|Ga0126377_11887614	Not Available	673	Open in IMG/M
3300010375\|Ga0105239_10107984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3083	Open in IMG/M
3300010375\|Ga0105239_10815964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1069	Open in IMG/M
3300012203\|Ga0137399_11470599	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300012582\|Ga0137358_10704801	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300012904\|Ga0157282_10039650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1098	Open in IMG/M
3300012909\|Ga0157290_10412884	Not Available	530	Open in IMG/M
3300012922\|Ga0137394_10965646	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300012923\|Ga0137359_11541736	Not Available	552	Open in IMG/M
3300012924\|Ga0137413_10096442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	1833	Open in IMG/M
3300012924\|Ga0137413_10194623	All Organisms → cellular organisms → Bacteria → Proteobacteria	1358	Open in IMG/M
3300012924\|Ga0137413_11241867	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300012924\|Ga0137413_11675725	Not Available	522	Open in IMG/M
3300012927\|Ga0137416_10000352	All Organisms → cellular organisms → Bacteria → Proteobacteria	21168	Open in IMG/M
3300012930\|Ga0137407_10143639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2101	Open in IMG/M
3300013306\|Ga0163162_12261649	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300014168\|Ga0181534_10001002	All Organisms → cellular organisms → Bacteria → Proteobacteria	19053	Open in IMG/M
3300014325\|Ga0163163_10095424	All Organisms → cellular organisms → Bacteria → Proteobacteria	2994	Open in IMG/M
3300014325\|Ga0163163_12127459	Not Available	621	Open in IMG/M
3300014501\|Ga0182024_12085210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	624	Open in IMG/M
3300014968\|Ga0157379_10096727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2650	Open in IMG/M
3300014969\|Ga0157376_10634159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1067	Open in IMG/M
3300015242\|Ga0137412_10003688	All Organisms → cellular organisms → Bacteria → Proteobacteria	12219	Open in IMG/M
3300015242\|Ga0137412_10045551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3578	Open in IMG/M
3300015242\|Ga0137412_10217745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1520	Open in IMG/M
3300015242\|Ga0137412_10483986	Not Available	949	Open in IMG/M
3300015264\|Ga0137403_10830919	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300021168\|Ga0210406_10326686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1242	Open in IMG/M
3300022894\|Ga0247778_1057893	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300022897\|Ga0247764_1052106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1280	Open in IMG/M
3300022910\|Ga0247768_1027022	All Organisms → cellular organisms → Bacteria → Proteobacteria	1835	Open in IMG/M
3300023275\|Ga0247776_10185703	Not Available	787	Open in IMG/M
3300024330\|Ga0137417_1506299	All Organisms → cellular organisms → Bacteria → Proteobacteria	1927	Open in IMG/M
3300025900\|Ga0207710_10016465	All Organisms → cellular organisms → Bacteria → Proteobacteria	3128	Open in IMG/M
3300025903\|Ga0207680_10434512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	931	Open in IMG/M
3300025903\|Ga0207680_10439314	All Organisms → cellular organisms → Bacteria → Proteobacteria	925	Open in IMG/M
3300025904\|Ga0207647_10019855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4512	Open in IMG/M
3300025911\|Ga0207654_10818165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	673	Open in IMG/M
3300025914\|Ga0207671_10011187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	7324	Open in IMG/M
3300025914\|Ga0207671_10107361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2120	Open in IMG/M
3300025914\|Ga0207671_10139874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1864	Open in IMG/M
3300025914\|Ga0207671_10201767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1553	Open in IMG/M
3300025925\|Ga0207650_10031555	All Organisms → cellular organisms → Bacteria → Proteobacteria	3827	Open in IMG/M
3300025941\|Ga0207711_10349647	All Organisms → cellular organisms → Bacteria → Proteobacteria	1369	Open in IMG/M
3300025949\|Ga0207667_11012539	Not Available	817	Open in IMG/M
3300025961\|Ga0207712_10110264	All Organisms → cellular organisms → Bacteria → Proteobacteria	2063	Open in IMG/M
3300025981\|Ga0207640_10133832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1796	Open in IMG/M
3300025986\|Ga0207658_11444866	Not Available	629	Open in IMG/M
3300026067\|Ga0207678_10047862	All Organisms → cellular organisms → Bacteria → Proteobacteria	3697	Open in IMG/M
3300027727\|Ga0209328_10194546	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300027771\|Ga0209279_10266290	Not Available	523	Open in IMG/M
3300027903\|Ga0209488_10435874	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300028379\|Ga0268266_10005402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	11924	Open in IMG/M
3300028536\|Ga0137415_10000123	All Organisms → cellular organisms → Bacteria → Proteobacteria	61379	Open in IMG/M
3300029989\|Ga0311365_11721149	Not Available	537	Open in IMG/M
3300030521\|Ga0307511_10000278	All Organisms → cellular organisms → Bacteria → Proteobacteria	53690	Open in IMG/M
3300030521\|Ga0307511_10084462	All Organisms → cellular organisms → Bacteria → Proteobacteria	2203	Open in IMG/M
3300031231\|Ga0170824_100898595	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300031231\|Ga0170824_108659692	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300031231\|Ga0170824_116121224	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M
3300031232\|Ga0302323_101232296	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300031446\|Ga0170820_11918375	Not Available	560	Open in IMG/M
3300031446\|Ga0170820_12097492	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300031446\|Ga0170820_13182086	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300031469\|Ga0170819_16720787	Not Available	553	Open in IMG/M
3300031726\|Ga0302321_100055273	All Organisms → cellular organisms → Bacteria → Proteobacteria	3843	Open in IMG/M
3300031753\|Ga0307477_10502686	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300031902\|Ga0302322_100538680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1365	Open in IMG/M
3300031962\|Ga0307479_10013600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	7629	Open in IMG/M
3300031962\|Ga0307479_10623847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1060	Open in IMG/M
3300033180\|Ga0307510_10000007	All Organisms → cellular organisms → Bacteria → Proteobacteria	558582	Open in IMG/M
3300034384\|Ga0372946_0119246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1246	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.78%
Host-Associated	Host-Associated	47.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Plants	Host-Associated → Plants	47.22%
Aquatic	Environmental → Aquatic	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Roots	Host-Associated → Plants → Roots	5.56%
Peat	Environmental → Terrestrial → Peat	3.70%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.70%
Marine	Environmental → Aquatic → Marine	1.85%
Rhizome	Host-Associated → Plants → Rhizome	1.85%
Freshwater	Environmental → Aquatic → Freshwater	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	7.41%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	1.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.85%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	1.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	13.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.56%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.70%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	2.78%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.85%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005238	Microbial communities on the surface of aged kaolinite enhanced biochar from soil in Sydney, Australia	Environmental	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
rootH1_100248948	3300003316	Sugarcane Root And Bulk Soil	MDDTTMQLGLLMEAAQAHQKAAESTLRKLKSSTTDLATQLRDEVRTVLTEQLHSLASDSNRAAAALRQVQRAATIRALVWSLGITTLCSVIPIFLACWLLPSRSEIAALRAKHDELATKIARLEERGGRIDLRRCGNGARLCVRVDRKAPTYGEQSDYLVIRGY*
rootH1_103027221	3300003323	Sugarcane Root And Bulk Soil	MDDTTMQLGLLMEAAQTHQKAAESTLRKLKSSTTDLATQLRDEVRTVLTEQLHSLASDSNRAAAALRQVQRAATIRALVWSLGITTLCSVIPIFLACWLLPSRSEIAALRAKHDELATKIARLEERGGRIDLRRCGNGARLCVRVDRKAPTYGEQSDYLVIRGY*
Ga0063454_1001427901	3300004081	Soil	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAADSNRASAALREVQRAANVRALVWSLSLTVLCSAIPLLLACWLIPSRSEIAALRAKHDELATKIASLEEQGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0073692_10088361	3300005238	Soil	AQTHQKSAEVTLRKLKSTAADLAPQLRNEVRSVLAEELQSLASDSKRAATALREVQRAANIRALVWSLSITTLCSAIPIGLACWLIPSRHEIAALRAKHDELATKIASLEERGGRMDLRRCGNGAHLCVRVDRKAPTYGEQSDYLVIRGY*
Ga0074072_100001862	3300005260	Soil	MDDTTMQLGLLMEAAQTHQKAAESTLRKLKSSTTDLATQVREEVRAVLTEQLQSLASDSNRAAAALRQVQRAASVRALVWSLGITTLCSAIPIFLACWLLPSRSEIATLRAKHDELATKIASLEERGGRIDLRHCGNGARLCVRVDRKAPIYGEQSDYLVIRGY*
Ga0070690_1001332202	3300005330	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAADSKRASAALREVQRAANVRALVWSLSLTALCSAIPLVLACWLIPSRGEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0066388_1001368043	3300005332	Tropical Forest Soil	MDDTTMKLGLLMEAAQAQQKAAESSLRKLKLVTSELAGVVREEIHRVVLEELQSLAADGKRAADALHAARRAASMRTLLWSFGITTLCAAIPLGLACWILPSRAEISALRAKHAELTTRIADLQQQGARIDLRRCGAGARLCVRVDRKAPIYGEQSDYLIIRGY*
Ga0066388_1023971642	3300005332	Tropical Forest Soil	LKSAVNELAGVVREEVHRVVLEELESLSADGKRAAQALREARRAANLQTLTWSIAITTLCSIIPVALAGWVIPSRTEIAALRARHDELVTRIASLEQRGGRIDLRRCGDGARLCVRVDRRAPTYGEQSDYLIVRGY*
Ga0070666_100200782	3300005335	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQANQKVAESSLKKLKAATNELATVVREEVHRVLMEELHSLANDTKRASDALRAARRAANVRALVWSVGITMLCSAIPLALASWLIPSRAQIAALRARRDELAVQIADLEERGGRIDLRRCGDGARLCVRVDRKAPPYGEQSDYLIVRGY*
Ga0070689_1006774142	3300005340	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQANQKVAESSLKKLKAATNELATVVREEVHRVLMEELRSLADDTKRASDALRAARRAANVRALVWSVGITMLCSAIPLALASWLIPSRAQIAALRARRDELAVQIADLEERGGRIDLRRCGDGARLCVRVDRKAPPYGEQSDYLIVRGY*
Ga0070671_1016562851	3300005355	Switchgrass Rhizosphere	RKLKDTAKELATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLIVRGY*
Ga0070667_1011987842	3300005367	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTARELATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDR
Ga0070710_114942001	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	TMQLGLLMEAAQAYQKAAESSLRKLRATTHELTGIVREEVRRAASEELHSLEADCRRAAESLRAARNAANVRTLIWSAGITTVCSLIPLGLACWIIPSGSEIATLRARHDQLVTKIASLEQQGGRMELRHCGDGARLCVRIDRKAPVYGEQSDYLIVRGY*
Ga0070663_1000507002	3300005455	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAADSKRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRAEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0070684_1002710332	3300005535	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRAEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0068853_1005548672	3300005539	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAADSKRASAALREVQRAANVRALVWSLSLTALCSAIPLVLACWLIPSRGEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYL
Ga0070665_1000196272	3300005548	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSAEATLRKLKSTAADLATLVRDEVRSVLVEELQSLASDSKRAATALREVQRAANIRALVWSLSITTLCSAIPIGLACWLIPSRNEIAALRAKHDALATKIASLEERGGRMDLRRCGNGAHLCVRVDRKAPTYGEQSDYLVIRGY*
Ga0068859_1000118738	3300005617	Switchgrass Rhizosphere	MKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0068864_1023941281	3300005618	Switchgrass Rhizosphere	ATNELATVVREEVHRVLMEELRSLADDTKRASDALRAARRAANVRALVWSVGITMLCSAIPLALASWLIPSRAQIAALRARRDELAVQIADLEERGGRIDLRRCGDGARLCVRVDRKAPPYGEQSDYLIVRGY*
Ga0068861_1011409322	3300005719	Switchgrass Rhizosphere	LGLLMEAAQANQKVAESSLKKLKAATNELATVVREEVHRVLMEELRSLADDTKRASDALRAARRAANVRALVWSVGITMLCSAIPLALASWLIPSRAQIAALRARRDELAVQIADLEERGGRIDLRRCGDGARLCVRVDRKAPPYGEQSDYLIVRGY*
Ga0068858_1000067684	3300005842	Switchgrass Rhizosphere	MKLGLLMEAAQTHQKSADSTLRKLKDTARQLATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEEQGGRIDLRRCGSGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0075443_100770112	3300006165	Marine	MDDTTMQLGLLMEAAQTHQKSAESTLRKLKATTNDIATIVREEVRNVIVTELQSLEADTKRASNALREVQRAATLRVLIWSVGITTLCSGIPLLLACWLIPSHGEIAVLRARHDELATKIASLEERGGRIDLRRCGAGARLCVRVDRKAPMYGEQSDYLVVRGY*
Ga0068871_1012801302	3300006358	Miscanthus Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAADSKRASAALREVQRAANVRALVWSLSLTALCSAIPLVLACWLIPSRGEIAALRAKHDELATKIASLEERGGRIDLRRCGN
Ga0075522_102816221	3300006638	Arctic Peat Soil	MKLGLLMEAAQANQKVAEASLKKLKAAANDLAAAVRDEVRHVLQEELHCLAADSKRASDALHAVRRAANIRIALWSVGMTMLCSVIPLALACWIIPSRTEITVLRAKHAELASKIAELEERGGRMDLRRCGDGARLCVRVDRKAPAYGEK
Ga0079219_118831402	3300006954	Agricultural Soil	MDDATMKLGLLMEAAQAHQKAADSSLRKLKATTTELAAVVRDEVHRVLLEELRSVETDSKRACEALHAVRRAANIRVLSWSLGITLLCSAVPLGLACWIVPSRADIAALRAKHDELATKIANLEQRGGRIDLRRCGDGGRLCVRVDRKA
Ga0105240_101452702	3300009093	Corn Rhizosphere	MDDTTMKLGLLMEAAQAHQKAADSSLKKLKAATSELADIVREEVNRAVLEQIHALGTDSKRACEALHAVRRAANMRILSWSLGMTLLCSAIPLGLGCWIVPSRVDIAALRAKHDELAAKIASLEQRGGRIDLRRCGDGGRLCVRVDRKAPTYGEHSDYLVVRGY*
Ga0105240_103468141	3300009093	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLVLACWLIPSRGEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0105240_107932912	3300009093	Corn Rhizosphere	MEAAQTHQKSAEATLRKLKSTAADLATLVRDEVRSVLVEELQCLAADSKRAATALREVQRAANIRALVWSLSITTLCSAIPIGLACWLIPSRNEIAALRAKHDALATKIASLEERGGRMDLRRCGNGAHLCVRVDRKAPTYGEQSDYLVIRGY*
Ga0105247_100086162	3300009101	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTARQLATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEEQGGRIDLRRCGSGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0105241_110375912	3300009174	Corn Rhizosphere	DDTTMKLGLLMEAAQTHQKSADSTLRKLKATANDLATIVRDEVRSVIVEEFQSLAADSKRASAALREVQRAANIRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPSYGEQSDYLVVRGY*
Ga0105248_122817101	3300009177	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQSAANVRVLVWSLSVTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPSYGEQSDYLVVRGY*
Ga0105237_100399273	3300009545	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTVLCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0105237_104805203	3300009545	Corn Rhizosphere	MDDTTMQLGLLMEAAQTHQKSAESSLRKLKAATNDLAAIVRDEVRIVIVNELQSLEADSKRASHALREVQRAATLRVLIWSVGITTLCSAIPLFLTCWLIPSHGEIAVLRARHDELATKIASLEERGGRIDLRRCGAGARLCVRVDRKAPSYGEQSDYLVVRGY*
Ga0105238_101807321	3300009551	Corn Rhizosphere	QKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRAEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0105238_110499151	3300009551	Corn Rhizosphere	MDDTTMQLGLLMEAAQTHQKSAESSLRKLKAATNDLAAIVRDEVRIVIVNELQSLEADSKRASHALREVQRAATLRVLIWSVGITTLCSAIPLFLTCWLIPSHGEIAVLRARHDELATKIASLEERGGRIDLRR
Ga0105249_112977992	3300009553	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRASAALREVQSAANVRVLVWSLSVTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQS
Ga0126377_118876142	3300010362	Tropical Forest Soil	MDDTTMRLGLLMEAAQAHQKAAESSLKKMKVATNELAEVVRQEVHRVVVEEFHCLEADSKRASDALRALGRAANVRTLIWSVVITTLCSVISLGLVGWLIPSRAEIASLRQKHDELATQIASLEQRGGRIDLRRCGLGARLCVRVDRKAPMYGEQSDYLIVRGY*
Ga0105239_101079843	3300010375	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKATANDLATIVRDEVHSVVIEEFQSLAADSKRASVALREVHRAANVRALVWSLSLTLLCSAIPLLLACWLIPSRSEIAALRAKHDELATKIASLEEHGGRIDLRRCGNSGRLCVRVDRKAPSYGEHSDYLVVRGY*
Ga0105239_108159642	3300010375	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRAAAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0137399_114705992	3300012203	Vadose Zone Soil	MEAAQANQKVAESSLKKLKAATNELAAVVREEVHRVLMEELHSLAADSKRASDALHAVRRAANVRTLAWSIGMTLLCSAIPLALACWIIPSRAQIAALRARRDELVTQIANLEERGGRIDLRRCGDGARLCVRVDRKAPIYGEQSDYLIVRGY*
Ga0137358_107048011	3300012582	Vadose Zone Soil	KLKAATNELATVVREEVHRVLMEELHSLAADSKRASDALRAAQRAANARALVWSVGMTILCSAIPLALASWLIPSRAQIAALRARRDELAIQIATLEERGGRIDLRRCGDGARLCVRVDRKAPIYGEQSDFLIVRGY*
Ga0157282_100396502	3300012904	Soil	MDDTTMQLGLLMEAAQTHQKSAESTLRKLKSTTSDLANIVRDEVRNVVTEELQSLAADSKRASAALREVQRAATVRAVVWSVGITTLCAAIPLSLICWIIPSRTEIATLRARHDELATKIANLQEQGGRIDLRHCGAGARLCVRVDRKAPAYGEQSDYLVIRGY*
Ga0157290_104128841	3300012909	Soil	MDDTTMQLGLLMEAAQTHQKSAESTLRRLKSTTSDLANIVRDEVRNVVTEELQSLAADSKRASAALREVQRAATVRAVVWSVGITTLCAAIPLSLTCWIIPSRTEIATLRARHDELATKIANLEGQGGRIDLRHCGAGARLCVRVDRKAPTYGEQSDYLVIRGY*
Ga0137394_109656461	3300012922	Vadose Zone Soil	MDDTTMKLGLLMEAAQANQKVAESSLRKLKAATNELATVVREEVHRVLMEELHSLAADSKRASDALRAAQRAANVRALVWGVGMTMLCAAIPLALASWLIPSRAQIAALRARRDELAIQIANLEERGGRIDLRRCGDGARLCVRVDRKAPTYGEQSDFLIVRGY*
Ga0137359_115417361	3300012923	Vadose Zone Soil	MDDTTMKLGLLMEAALANQKAAESSLKKLKAATNELATVVREEVHRVVVEELHFLAADSKRASDALRAVRRTANVRGLIWNVGTTVLCSAIPLVLACWIIPSRAEIAALRARHDELATEIANLEKRGGRIDLRRCGDGARLCVRV
Ga0137413_100964422	3300012924	Vadose Zone Soil	MDDTTMKLGLLMEAAQAHQKAAESTLKKLKATSNDLAGIVRDEVRHVVIEEFQLLAADSKRASDALHEVQRAANVRALVWSVGITTLCSAIPLVLTCLIIPSRSEISALRAKHDELATKIASLEQRGGRIDLRRCGDSARLCVRVDRKAPTYGDQSDYLVVRGY*
Ga0137413_101946232	3300012924	Vadose Zone Soil	MDNTTMQLGLLMEAAQTHQKSAESILRKLKATTNDLATIVRDEVRNAIVSEIQSLEADSKRASTALREVQRAASVRVLIWSVGITTLCSAIPLLLTCWMIPSRGEIAALRARHDELATKIASLEEQGGRIDLRRCGAGARLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0137413_112418671	3300012924	Vadose Zone Soil	SSLKKLKAATNELATVVREEVHRVLMEELHSLAADSKRASDALRAAQRAANARALVWSIGMTMLCSAIPLALASWLIPSRAQIAALRARRDELAIQIATLEERGGRIDLRRCGDGARLGVRVDRKAPIYGEQSDFLIVRGY*
Ga0137413_116757251	3300012924	Vadose Zone Soil	MDETTMKLGLLMEAAQAHHKAAESSLKKLKATANDLAGIVRDEVRRVVMEEFQSLAADSKRASDAMHEVQRAANVRALLWSLGMTVLCSAIPLVLACWIIPSRAEISALRTQHDELATQIARLEERGGRIDLRRCGDGARLCVRVDRKAPPYGEQSDYLV
Ga0137416_100003522	3300012927	Vadose Zone Soil	MDDTTMKLGLLMEAAQAHQKAAESTLKKLKATSNDLAGIVRDEVRHVVIDEFQLLAADSKRASDALHEVQRAANVRALVWSVGITTLCSAIPLVLTCLIIPSRGEISALRAKHDELATKIASLEQRGGRIDLRRCGDSARLCVRVDRKAPTYGDQSDYLVVRGY*
Ga0137407_101436392	3300012930	Vadose Zone Soil	MDDTTMKLGLLMEAAQAHQKAAESSLKKLKAATNELATVVREEVHRVAMEELHCLAADSKRASDALRAVRRAANVRALVWSVGMTILCSAIALALAWWIIPSRAQIDALRARRDELTTRIANLEERGGRMDLRRCGDGARLCVRVDRKAPLYGDQSDYLIVRGY*
Ga0163162_122616492	3300013306	Switchgrass Rhizosphere	MEAAQANQKVAESSLKKLKAATNELATVVREEVHRVLMEELHSLANDTKRASDALRAARRAANVRALVWSVGITMLCSAIPLALASWLIPSRAQIAALRARRDELAVQIADLEERGGRIDLRRCGDGARLCVRVDRKAPPYGEQSDYLIVRGY*
Ga0181534_1000100218	3300014168	Bog	MDDTTMQLGLLMEAAQSHQKAAESTLRKLKASTADLATQLRDEVRTVLTEQLQSLTSDSNRAAAALRQVQRAANVRTLVWSVGITTLCSAIPLFLACWLIPSHSEIASLRAKHDELATKIASLEERGGRIDLRHCGNGARLCVRVDRKAPTYGEQSDYLVIRGY*
Ga0163163_100954243	3300014325	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRASAALREAQRAANVRALVWSLSLTTLCSAIPLLLACWLIPSRAEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0163163_121274591	3300014325	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTARELATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEEQNGRIDLRRCGNGGRLCVRVDRKAPTYGEQSD
Ga0182024_120852102	3300014501	Permafrost	SLKKLKAAANDLATVVREEVHRILLEEMHSLVADSKRASDSLHAVRRAANVRVALWSVGMATLSSLIPLGLAYWVIPSQSDIALLRAKHADLTSKIADLDERGARIDLRRCGDGSRLCVRVDRKAPTYGEKSDYLVVGGY*
Ga0157379_100967272	3300014968	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTTLCSAIPLLLACWLIPSRAEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0157376_106341592	3300014969	Miscanthus Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAADSKRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRGEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPSYGEQSDYLVVRGY*
Ga0137412_1000368812	3300015242	Vadose Zone Soil	MDDTTMKLGLLMEAAQAHQKAAESTLKKLKATSNDLAGIVRDEVRHVVIEEFQLLAADSKRASDALHEVQRAANVRALVWSVGITTLCTAIPLVLTCLIIPSRSEISALRAKHDELATKIASLEQRGGRIDLRRCGDSARLCVRVDRKAPTYGDQSDYLVVRGY*
Ga0137412_100455513	3300015242	Vadose Zone Soil	MDNTTMQLGLLMEAAQTHQKSAESILRKLKATTNDLATIVRDEVRNAIVSEIQSLEADSKRASTALREVQRAASVRVLIWSVGITTLCSAIPLLLTCWMIPSRGEIAALRARHDELATKIASLEERGGRIDLRRCGAGARLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0137412_102177451	3300015242	Vadose Zone Soil	MDDTTMKLGLLMEAAHANQKVAESSLKKLKAATNELATVVREEVHRVLMEELHSLAADSKRASDALRAAQRAANARALVWSIGMTMLCSAIPLALASWLIPSRAQIAALRARRDELAIQIATLEERGGRIDLRRCGDGARLGVRVDRKAPIYGEQSDFLIVRGY*
Ga0137412_104839861	3300015242	Vadose Zone Soil	MDETTMKLGLLMEAAQAHHKAAESSLKKLKTTANDLAAIVRDEVRRVVMEEFQSLAADSKRASDAMHEVQRAANVRALLWSLGMTVLCSAIPLVLACWIIPSRAEIAALRARHDELATQIASLEERGGRIELRRCGGGARLCVRVDRKAPTYGEQSDYLVVRGY*
Ga0137403_108309192	3300015264	Vadose Zone Soil	QKVAESSLKKLKAATNELASVVREEVHRVLMEELHSLAADTKRASDALRAAQRAANARALVWSIGITMLCSAIPLALASWLIPPRAQIAALRGRREELAIQIANLEQRGGRIDLRRCGDGARLCVRVDRKAPIYGEQSDFLIVRGY*
Ga0210406_103266861	3300021168	Soil	LLMEGAQAHHKAAESSLKKLKATANDLAAIVRDEVRRVVMEEFQSLAADSKRASDALHEVQRAANVRALLWSIGMTVLCSAIPLVLACWIIPSRAEIAALRARHDELATQIASLEERGGRIELKRCGGGARLCVRVDRKAPTYGEQSDYLVVRGY
Ga0247778_10578932	3300022894	Plant Litter	MDDTTMQLGLLMEAAQTHQKSAESTLRKLKSTTSDLANIVRDEVRNVVTEELQSLAADSKRASAALREVQRAATVRAVVWSVGITTLCAAIPLSLICWIIPSRTEIATLRARHDELATKIANLQEQGGRIDLRHCGAGARLCVRVDRKAPAYGEQSDYLVIRGY
Ga0247764_10521062	3300022897	Plant Litter	HLRPRITAMDDTTMQLGLLMEAAQTHQKSAESTLRKLKSTTSDLANIVRDEVRNVVTEELQSLAADSKRASAALREVQRAATVRAVIWSVGITTLCAAIPLSLICWIIPSRTEIATLRARHDELATKIANLQEQGGRIDLRHCGAEARLCVRVDRKAPAYGEQSDYLVIRGY
Ga0247768_10270222	3300022910	Plant Litter	MQLGLLMEAAQTHQKSAESTLRKLKSTTSDLANIVRDEVRNVVTEELQSLAADSKRASAALREVQRAATVRAVVWSVGITTLCAAIPLSLTCWIIPSRTEIATLRARHDELATKIANLEGQGGRIDLRHCGAGARLCVRVDRKAPTYGEQSDYLVIRGY
Ga0247776_101857032	3300023275	Plant Litter	VAALARGPRYRLNQRTFCRLRQSDNGLAPEHLRPRITAMDDTTMQLGLLMEAAQTQQKSAESTLRKLKSATGDLANIVRDEVRNVVTEELQSLAADSKRASAALREVQRAATVRAVVWSVGITTLCAAIPLSLTCWIIPSRTEIATLRARHDELATKIANLEGQGGRIDLRHCGAGARLCVRVDRKAPTYGEQSDYLVIRGY
Ga0137417_15062992	3300024330	Vadose Zone Soil	MLLSKGARLGVFRANHHTLSARSPGKALITSSDVMDDTTMKLGLLMEAAQANQKVAESSLKKLKAATNELATVVREEVRRVVREELHSLAADSRRAADALSAARRAANMRTLVWSVGITMLCSAIPLALAWWIIPSRAQITALRARHAELVTRIANLEERGARIDLRRCGDGARLCVRVDRKAPIYGEQSDYLIVRGY
Ga0207710_100164652	3300025900	Switchgrass Rhizosphere	MKLGLLMEAAQTHQKSADSTLRKLKDTARQLATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEEQGGRIDLRRCGSGGRLCVRVDRKAPTYGEQSDYLVVRGY
Ga0207680_104345122	3300025903	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTARELATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAP
Ga0207680_104393141	3300025903	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQANQKVAESSLKKLKAATNELATVVREEVHRVLMEELHSLANDTKRASDALRAARRAANVRALVWSVGITMLCSAIPLALASWLIPSRAQIAALRARRDELAVQIADLEERGGRIDLRRCGDGARLCVRVDRKAPPYGEQSDYLIVRG
Ga0207647_100198553	3300025904	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAADSKRASAALREVQRAANVRALVWSLSLTALCSAIPLVLACWLIPSRGEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY
Ga0207654_108181652	3300025911	Corn Rhizosphere	QTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQSAANVRVLVWSLSVTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLIVRGY
Ga0207671_100111874	3300025914	Corn Rhizosphere	MKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTVLCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY
Ga0207671_101073611	3300025914	Corn Rhizosphere	MDDTTMKLGLLMEAAQAHQKSAESTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRAEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY
Ga0207671_101398742	3300025914	Corn Rhizosphere	MDDTTMQLGLLMEAAQTHQKSAESSLRKLKAATNDLAAIVRDEVRIVIVNELQSLEADSKRASHALREVQRAATLRVLIWSVGITTLCSAIPLFLTCWLIPSHGEIAVLRARHDELTTRIASLEERGGRIDLRRCGAGARLCVRVDRKAPSYGEQSDYLVVRGY
Ga0207671_102017672	3300025914	Corn Rhizosphere	MDDTTMKLGLLMEAAQAHQKAADSSLKKLKAATSELADIVREEVNRAVLEQIHALGTDSKRACEALHAVRRAANMRILSWSLGMTLLCSAIPLGLGCWIVPSRVDIAALRAKHDELAAKIASLEQRGGRIDLRRCGDGGRLCVRVDRKAPTYGEHSDYLVVRGY
Ga0207650_100315552	3300025925	Switchgrass Rhizosphere	MKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDNNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAVLRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY
Ga0207711_103496472	3300025941	Switchgrass Rhizosphere	MKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY
Ga0207667_110125391	3300025949	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVREEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLVLACWLIPSRGEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY
Ga0207712_101102642	3300025961	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQANQKVAESSLKKLKAATNELATVVREEVHRVLMEELHSLANDTKRASDALRAARRAANVRALVWSVGITMLCSAIPLALASWLIPSRAQIAALRARRDELAVQIADLEERGGRIDLRRCGDGARLCVRVDRKAPPYGEQSDYLIVRGY
Ga0207640_101338322	3300025981	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRAEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLIVRGY
Ga0207658_114448661	3300025986	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTARELATIVRDGVRSVVVEEFQSLAVDSNRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRSEIAALRAKHDELAIKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPVYGDQ
Ga0207678_100478624	3300026067	Corn Rhizosphere	MDDTTMKLGLLMEAAQTHQKSADSTLRKLKDTAKELATIVRDEVRSVVVEEFQSLAADSKRASAALREVQRAANVRALVWSLSLTALCSAIPLLLACWLIPSRAEIAALRAKHDELATKIASLEERGGRIDLRRCGNGGRLCVRVDRKAPTYGEQSDYLVVRGY
Ga0209328_101945462	3300027727	Forest Soil	NQKAAESSLKKLKAATNELATVVREEVHRVVMEELHSVAADAKRASDALHAVRRAANVRALAWSVGMTILCSAIPLALACWIIPSRAQIAALRARRDELVTQIANLEGRGGRIDLRRCGDGARLCVRVDRKAPIYGEQSDYLIVRGY
Ga0209279_102662901	3300027771	Marine	SSHLMDDTTMQLGLLMEAAQTHQKSAESTLRKLKATTNDIATIVREEVRNVIVTELQSLEADTKRASNALREVQRAATLRVLIWSVGITTLCSGIPLLLACWLIPSHGEIAVLRARHDELATKIASLEERGGRIDLRRCGAGARLCVRVDRKAPMYGEQSDYLVVRGY
Ga0209488_104358742	3300027903	Vadose Zone Soil	MDDTTMKLGLLMEAAHSNQKVAESSLKKLKAATNELATVVREEVHRVLMEELHSLAADSKRASDALRAAQRAANARALVWSIGMTMLCSAIPLALASWLIPSRAQIAALRARRDELAIQIATLEERGGRIDLRRCGDGARLCVRVDRKAPIYGEQSDFLIVRGY
Ga0268266_100054024	3300028379	Switchgrass Rhizosphere	MDDTTMKLGLLMEAAQTHQKSAEATLRKLKSTAADLATLVRDEVRSVLVEELQSLASDSKRAATALREVQRAANIRALVWSLSITTLCSAIPIGLACWLIPSRNEIAALRAKHDALATKIASLEERGGRMDLRRCGNGAHLCVRVDRKAPTYGEQSDYLVIRGY
Ga0137415_1000012341	3300028536	Vadose Zone Soil	MDDTTMKLGLLMEAAQAHQKAAESTLKKLKATSNDLAGIVRDEVRHVVIDEFQLLAADSKRASDALHEVQRAANVRALVWSVGITTLCSAIPLVLTCLIIPSRGEISALRAKHDELATKIASLEQRGGRIDLRRCGDSARLCVRVDRKAPTYGDQSDYLVVRGY
Ga0311365_117211491	3300029989	Fen	TMDDTTLKLGLLMEAAQTHQKSAEAALRKLKAIANDLAGVVRDEVRNVIVEELQSLAADSKRASSALREVQRAANMRALVWGIGITTLCSAIPLLLTCWIIPSHSEIATLRARHDELATKIASLEERGGRIDLRRCGAGARLCVRVDRKAPMYGEQSDYLIVRGY
Ga0307511_1000027825	3300030521	Ectomycorrhiza	MDDTTMKLGLLMEAAQANQKAAESSLKKLKAATNELATVVREEVHRVVMEELHCLAADSKRASEALRAVRRAANVQALVWSVGMTILCSAIALALAWWIIPSRAQIAALRARRDELTTQIANLEERGGRMDLRRCGDGARLCVRVDRKAPIYGDQSDYLIVRGY
Ga0307511_100844622	3300030521	Ectomycorrhiza	MDDTTMKLGLLMESAHAHQKAAESSLKKLKATANDLAGIVRDEVRHVVIEEFQSLAADSQRASDALHEVQRAANVRALVWSVGITTLCSAIPLLLACWIIPSRAEISALRAKHDELATKIASLEERGGRIDLRRCGDGARLCVRVDRKAPTYGAQSDYLVVRGY
Ga0170824_1008985951	3300031231	Forest Soil	MDETAMKIGLLMEAAHAHHKAAETSLKKLRATTSDLTGIVRDEVRRVVTEEFQSLATDSRRASDALHEVQRAANIRALIWSIGMTALCSAIPLLLSCWIIPSRAEIAALRTKHDELATKIASLEEHGGRIDLRRCGDGARLCVRVDRKAPTY
Ga0170824_1086596921	3300031231	Forest Soil	TLRKLKSTTTDLATLVRDEVRSVLIEEFQSLAADSKRAATALREVQRAANIRALVWSLGITTLCSAIPIGLAGWLIPSHREIAALRAKHDELATKIASLEDRGGRIDLRRCGNGARLCVRVDRKAPTYGEQSDYLVIRGY
Ga0170824_1161212241	3300031231	Forest Soil	MDETTMKLGLLMEAAQAHHKAAESSLKKLKATANDLAAIVRDEVRRVVMEEFQSLAADSKRASDALHEVQRAANVRALLWSIGMTAFCSAIPLVLACWIIPSRAEILALRAKRDELATQITSLEERGGRIDLRRCGDGARLCVRVDRKAPTYGEQSDYLVVRGY
Ga0302323_1012322961	3300031232	Fen	PNQRTALDDTTLKLGRLMAAAQPHQKSAEAALRKLKAIANDLAGVVRDEVRNVIVEELQSLAADSKRASSALREVQRAANMRALVWGIGITTLCSAIPLLLTCWIIPSHSEIATLRARHDELATKIASLEERGGRIDLRRCGAGARLCVRVDRKAPMYGEQSDYLIVRGY
Ga0170820_119183752	3300031446	Forest Soil	STATDLATLVRDEVHSVLIEEFQSLAADSKRAATALREVQRAANIRALVWSLGITTLCSAIPIGLAGWLIPSHREIAALRAKHDELATKIASLEDRGGRIDLRRCGNGARLCVRVDRKAPTYGEQSDYLVIRGY
Ga0170820_120974921	3300031446	Forest Soil	MDETAMKIGLLMEAAHAHHKAAETSLKKLRATTSDLTGIVRDEVRRVVTEEFQSLATDSRRASDALHEVQRAANIRALIWSIGMTALCSAIPLLLSCWIIPSRAEIAALRTKHDELATKIASLEEHGGRIDLRRCGDGARLCVRVDRKAPTYGEQSDYLVVRGY
Ga0170820_131820862	3300031446	Forest Soil	MDDTTMKLGLLMEAAQTQQKAAESSLKKLKATANDLAGIVRDEVRHVVIEEFQSLAADSKRASDALHEVQRAANVRALVWSLGITTLCSAIPLLLACWIIPSRAEISALRAKHDELATKIASLEERGGRIDLRRCGDGARLCVRVDRKAPTYGAQSDYLVVRGY
Ga0170819_167207871	3300031469	Forest Soil	SLKKLKATANDLAAIVRDEVRRVVMEEFQSLAADSKRASDALHEVQRAANVRALLWSIGMTAFCSAIPLVLACWIIPSRAEIAALRARHDELATQIASLEERGGRIELRRCGVGARLCVRVDRKAPTYGEQSDYLVVRGY
Ga0302321_1000552732	3300031726	Fen	MDDTTLKLGLLMEAAQTHQKSAEAALRKLKAIANDLAGVVRDEVRNVIVEELQSLAADSKRASSALREVQRAANMRALVWGIGITTLCSAIPLLLTCWIIPSHSEIATLRARHDELATKIASLEERGGRIDLRRCGAGARLCVRVDRKAPMYGEQSDYLIVRGY
Ga0307477_105026862	3300031753	Hardwood Forest Soil	MDDTTTQLGLLMEAAQAHQKAAESSLRKLKLAANELAGVVREEVHRVVLEELHSLSADSKRAADALRAARRAATLRTALWSIGMTTLCSAIPLLVGCWFIPSRAEIAALRSRRDALVAQISSLEQQGGRIDLKRCGDGGRLCVRVDRKAPAYGDQSDYLIVRGY
Ga0302322_1005386802	3300031902	Fen	RRSAHSARPATPLTTNKRTAMDDTTLKLGLLMEAAQTHQKSAEAALRKLKAIANDLAGVVRDEVRNVIVEELQSLAADSKRASSALREVQRAANMRALVWGIGITTLCSAIPLLLTCWIIPSHSEIATLRARHDELATKIASLEERGGRIDLRRCGAGARLCVRVDRKAPMYGEQSDYLIVRGY
Ga0307479_100136003	3300031962	Hardwood Forest Soil	MDDTTMKLGLLMEAAQTQQKAAESSLKKLKAATNELATVVREEVHRVVIEELHSLAAESKRASDALRAVQRAANVRALAWSVGTTMLCSAIPLALACWIIPSRAQIATLRARHDELATKIANLERSGGRIDLRRCGDGARLCVRVDRKAPIYGEQSDYLIVRGY
Ga0307479_106238471	3300031962	Hardwood Forest Soil	KAAESSLRKLKLAANELAGVVREEVHRVVLEELHSLSADSKRAADALRGARRAAALRTALWSVGMTILCSAIPLLVGCWFIPSRAEIAALRSRRDALVAQISSLEQQGARIDLKRCGDGGRLCVRVDRKAPAYGDQSDYLIVRGY
Ga0307510_10000007323	3300033180	Ectomycorrhiza	MDDTTLKLGLLMEAAQTHQKSAEATLRKLKSTTTDLATLVRDEVRSVLIEEFQSLAADSKRAATALREVQRAANIRALVWSLGITTLCSAIPIGLAGWLIPSHREIAALRAKHDELATKIASLEDRGGRIDLRRCGNGARLCVRVDRKAPTYGEQSDYLVIRGY
Ga0372946_0119246_458_952	3300034384	Soil	MDDTTMKLGLLMEAAQANQKAAESSLKKLKATTNELATVVREEVHRVVREELHSLAADTKRASDALHAVRRAANVRALAWSIGMTVLCSAIPLALACWIIPSRAQIAALRARRDALITQIANLEERGGRIDLRRCGDGARLCVRVDRKAPIYGEQSDYLIVRGY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090863

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences