NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090850

Metagenome Family F090850

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090850
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 46 residues
Representative Sequence MNDSKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMTEHKKMK
Number of Associated Samples 91
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 86.11 %
% of genes near scaffold ends (potentially truncated) 17.59 %
% of genes from short scaffolds (< 2000 bps) 90.74 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (75.926 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(36.111 % of family members)
Environment Ontology (ENVO) Unclassified
(84.259 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.519 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 51.35%    β-sheet: 0.00%    Coil/Unstructured: 48.65%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF08406CbbQ_C 35.19
PF00565SNase 13.89
PF13578Methyltransf_24 5.56
PF00291PALP 0.93
PF01596Methyltransf_3 0.93
PF00085Thioredoxin 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0714MoxR-like ATPaseGeneral function prediction only [R] 35.19
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 0.93
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 0.93
COG4123tRNA1(Val) A37 N6-methylase TrmN6Translation, ribosomal structure and biogenesis [J] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A75.93 %
All OrganismsrootAll Organisms24.07 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10084660All Organisms → Viruses → Predicted Viral1386Open in IMG/M
3300000101|DelMOSum2010_c10223638Not Available612Open in IMG/M
3300000947|BBAY92_10191833Not Available532Open in IMG/M
3300000949|BBAY94_10188041Not Available557Open in IMG/M
3300000973|BBAY93_10154525Not Available576Open in IMG/M
3300001450|JGI24006J15134_10120673Not Available905Open in IMG/M
3300001589|JGI24005J15628_10175839Not Available623Open in IMG/M
3300001963|GOS2229_1011069All Organisms → Viruses → Predicted Viral1330Open in IMG/M
3300004097|Ga0055584_101128896Not Available819Open in IMG/M
3300005400|Ga0066867_10183430Not Available771Open in IMG/M
3300005427|Ga0066851_10230198Not Available579Open in IMG/M
3300006166|Ga0066836_10377898Not Available853Open in IMG/M
3300006484|Ga0070744_10227383Not Available529Open in IMG/M
3300006735|Ga0098038_1005900All Organisms → Viruses → Predicted Viral4966Open in IMG/M
3300006735|Ga0098038_1091410Not Available1057Open in IMG/M
3300006735|Ga0098038_1162589Not Available738Open in IMG/M
3300006737|Ga0098037_1216693Not Available622Open in IMG/M
3300006738|Ga0098035_1108779Not Available961Open in IMG/M
3300006751|Ga0098040_1024659Not Available1944Open in IMG/M
3300006751|Ga0098040_1156800Not Available673Open in IMG/M
3300006751|Ga0098040_1229924Not Available539Open in IMG/M
3300006793|Ga0098055_1060820All Organisms → Viruses → Predicted Viral1508Open in IMG/M
3300006902|Ga0066372_10503625Not Available712Open in IMG/M
3300006919|Ga0070746_10098684All Organisms → Viruses → Predicted Viral1459Open in IMG/M
3300006920|Ga0070748_1067924Not Available1391Open in IMG/M
3300006921|Ga0098060_1031346All Organisms → Viruses → Predicted Viral1617Open in IMG/M
3300006922|Ga0098045_1156408All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon522Open in IMG/M
3300006990|Ga0098046_1120510Not Available574Open in IMG/M
3300007555|Ga0102817_1066403Not Available788Open in IMG/M
3300008050|Ga0098052_1349662Not Available554Open in IMG/M
3300009002|Ga0102810_1089045Not Available965Open in IMG/M
3300009172|Ga0114995_10735774Not Available539Open in IMG/M
3300009418|Ga0114908_1222756Not Available580Open in IMG/M
3300009481|Ga0114932_10026103All Organisms → Viruses → Predicted Viral3948Open in IMG/M
3300009481|Ga0114932_10188598Not Available1257Open in IMG/M
3300009481|Ga0114932_10588418Not Available651Open in IMG/M
3300009495|Ga0115571_1234764Not Available741Open in IMG/M
3300009512|Ga0115003_10070156Not Available2188Open in IMG/M
3300010148|Ga0098043_1222908Not Available517Open in IMG/M
3300010883|Ga0133547_11775781All Organisms → Viruses → Predicted Viral1142Open in IMG/M
3300012920|Ga0160423_10188339All Organisms → Viruses → Predicted Viral1439Open in IMG/M
3300012920|Ga0160423_10300148Not Available1105Open in IMG/M
3300012928|Ga0163110_10426502Not Available998Open in IMG/M
3300012953|Ga0163179_11972216Not Available537Open in IMG/M
3300012954|Ga0163111_10310743All Organisms → Viruses → Predicted Viral1403Open in IMG/M
3300013010|Ga0129327_10294642Not Available838Open in IMG/M
3300017705|Ga0181372_1026727Not Available981Open in IMG/M
3300017708|Ga0181369_1093854Not Available628Open in IMG/M
3300017713|Ga0181391_1005238All Organisms → Viruses → Predicted Viral3482Open in IMG/M
3300017717|Ga0181404_1090069Not Available755Open in IMG/M
3300017725|Ga0181398_1061802Not Available900Open in IMG/M
3300017727|Ga0181401_1120341All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon656Open in IMG/M
3300017728|Ga0181419_1079847Not Available819Open in IMG/M
3300017728|Ga0181419_1102174Not Available705Open in IMG/M
3300017731|Ga0181416_1020818All Organisms → Viruses → Predicted Viral1541Open in IMG/M
3300017746|Ga0181389_1096538Not Available817Open in IMG/M
3300017746|Ga0181389_1108418Not Available760Open in IMG/M
3300017750|Ga0181405_1037501All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1302Open in IMG/M
3300017757|Ga0181420_1238410Not Available519Open in IMG/M
3300017758|Ga0181409_1197964All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon580Open in IMG/M
3300017759|Ga0181414_1065449Not Available967Open in IMG/M
3300017765|Ga0181413_1002751Not Available5479Open in IMG/M
3300017767|Ga0181406_1030587All Organisms → cellular organisms → Bacteria1687Open in IMG/M
3300017775|Ga0181432_1000496Not Available8230Open in IMG/M
3300020165|Ga0206125_10105473All Organisms → Viruses → Predicted Viral1187Open in IMG/M
3300020279|Ga0211634_1096562Not Available650Open in IMG/M
3300020365|Ga0211506_1226620Not Available518Open in IMG/M
3300020374|Ga0211477_10264409Not Available587Open in IMG/M
3300020379|Ga0211652_10186298Not Available633Open in IMG/M
3300020394|Ga0211497_10112994All Organisms → Viruses → Predicted Viral1087Open in IMG/M
3300020410|Ga0211699_10293550Not Available633Open in IMG/M
3300020410|Ga0211699_10318979Not Available608Open in IMG/M
3300020414|Ga0211523_10197512Not Available835Open in IMG/M
3300020421|Ga0211653_10086156All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon1400Open in IMG/M
3300020421|Ga0211653_10188870Not Available905Open in IMG/M
3300020428|Ga0211521_10225179Not Available850Open in IMG/M
3300020428|Ga0211521_10255266Not Available788Open in IMG/M
3300020436|Ga0211708_10227528Not Available752Open in IMG/M
3300020438|Ga0211576_10075810Not Available1883Open in IMG/M
3300020450|Ga0211641_10006034Not Available7311Open in IMG/M
3300020451|Ga0211473_10368450Not Available736Open in IMG/M
3300020468|Ga0211475_10457644Not Available614Open in IMG/M
3300020470|Ga0211543_10264197Not Available841Open in IMG/M
3300020471|Ga0211614_10534835Not Available520Open in IMG/M
3300020474|Ga0211547_10352567Not Available744Open in IMG/M
3300020474|Ga0211547_10425863Not Available667Open in IMG/M
3300020476|Ga0211715_10282060Not Available812Open in IMG/M
3300020478|Ga0211503_10339164Not Available815Open in IMG/M
3300020595|Ga0206126_10126221All Organisms → Viruses → Predicted Viral1238Open in IMG/M
3300021368|Ga0213860_10073388All Organisms → Viruses → Predicted Viral1480Open in IMG/M
(restricted) 3300024259|Ga0233437_1169422Not Available968Open in IMG/M
3300025085|Ga0208792_1067387Not Available651Open in IMG/M
3300025096|Ga0208011_1081833Not Available705Open in IMG/M
3300025110|Ga0208158_1103826Not Available666Open in IMG/M
3300025112|Ga0209349_1162726Not Available592Open in IMG/M
3300025118|Ga0208790_1050759All Organisms → Viruses → Predicted Viral1305Open in IMG/M
3300025120|Ga0209535_1112022All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon949Open in IMG/M
3300025127|Ga0209348_1175646Not Available614Open in IMG/M
3300025128|Ga0208919_1040733Not Available1632Open in IMG/M
3300025138|Ga0209634_1044081All Organisms → Viruses → Predicted Viral2249Open in IMG/M
3300025138|Ga0209634_1220193Not Available709Open in IMG/M
3300025138|Ga0209634_1250776Not Available640Open in IMG/M
3300025141|Ga0209756_1227901All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon695Open in IMG/M
3300025151|Ga0209645_1004723Not Available6014Open in IMG/M
3300025168|Ga0209337_1125509Not Available1150Open in IMG/M
3300029318|Ga0185543_1044044Not Available967Open in IMG/M
3300029318|Ga0185543_1078364Not Available663Open in IMG/M
3300029319|Ga0183748_1012228Not Available3467Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine36.11%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine24.07%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater14.81%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater3.70%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface2.78%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface2.78%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.85%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.85%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.85%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.85%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean0.93%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.93%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.93%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.93%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.93%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.93%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.93%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.93%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300000973Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93Host-AssociatedOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300001963Marine microbial communities from Nags Head, North Carolina, USA - GS013EnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300005400Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261EnvironmentalOpen in IMG/M
3300005427Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65EnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007555Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300009002Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009418Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300010148Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaGEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020279Marine microbial communities from Tara Oceans - TARA_B100000482 (ERX555939-ERR599017)EnvironmentalOpen in IMG/M
3300020365Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)EnvironmentalOpen in IMG/M
3300020374Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)EnvironmentalOpen in IMG/M
3300020379Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)EnvironmentalOpen in IMG/M
3300020394Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)EnvironmentalOpen in IMG/M
3300020410Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)EnvironmentalOpen in IMG/M
3300020414Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300020428Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)EnvironmentalOpen in IMG/M
3300020436Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020450Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020468Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020471Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300020476Marine microbial communities from Tara Oceans - TARA_B100001750 (ERX556108-ERR598958)EnvironmentalOpen in IMG/M
3300020478Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300024259 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_200_MGEnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300029318Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1008466023300000101MarineMKSMSKMNKVIFQSYTDVINKGMRAGRDMSLLSKRLNHLMSEHKKTI*
DelMOSum2010_1022363823300000101MarineMKNVSKMNKVIFQSYTDVINKGIRAGKDMSVAAKRLNHLMSEHKKTI*
BBAY92_1019183313300000947Macroalgal SurfaceMSNSKVKKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMTEYKKVK*
BBAY94_1018804113300000949Macroalgal SurfaceMSDSKVHKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMTEHKKMK*
BBAY93_1015452523300000973Macroalgal SurfaceMSDSKINKTIFQSYTDVINKGMKAGRDMSVAVKRLNHLVSEHKKMK*
JGI24006J15134_1012067313300001450MarineMSDSKMNKTIFKSYTDVINTGIKAGKDMSVVVKRLNHLMSKYKKTV*
JGI24005J15628_1017583923300001589MarineMSNNKTNKVIFQSYTDVINSGKKAGKDMSVAVKRLNHLMTEHKKVK*
GOS2229_101106973300001963MarineMSDSKINKTIFQSYTDVINKGMRAGRDMSVAVKRLNHLVSEHKKMK*
Ga0055584_10112889623300004097Pelagic MarineMSNSKMIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN*
Ga0066867_1018343023300005400MarineMSDNSKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMSEHKKVI*
Ga0066851_1023019823300005427MarineMSDSKMNKTIFESYTDVINKGMKAGKDMSVAVKRLNYLVSEHKKVI*
Ga0066836_1037789823300006166MarineMSDNSKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMAEHKKVI*
Ga0070744_1022738323300006484EstuarineMSNNKTNKVIFQSYTDVINSGKKAGKDMSVAVKRLNHLMTEHKKVN*
Ga0098038_100590083300006735MarineMSKSKTNKTIFQSYTDVINKGMKAGRDMSVAVNRLNHLMTEYKKMK*
Ga0098038_109141023300006735MarineMSNSKTIKTIFKSYTDVINNGMKAGKDMSVAVKRLNHLMTEHKKMK*
Ga0098038_116258923300006735MarineMKSMSKMNKVIFQSYTDVINKGMKAGKDMSLVAKRLNHLMSEHKKTI*
Ga0098037_121669313300006737MarineMSNSKTIKTIFKSYTDVINNGMKAGKDMSVVVKRLNHLVSEHKKMK*
Ga0098035_110877923300006738MarineMSDSKMNKTIFRSYRDVIRSGKSVGKDMSVAEKRLNHLMSEHKKVK*
Ga0098040_102465933300006751MarineMSDSKMNKTIFESYTDVINNGMKAGKDMSVAVKRLNHLMSEHKKKI*
Ga0098040_115680013300006751MarineMSDNKINKTIFNSYTDVINNGMKAGRDMSIAVKRLNHLMSEHKKVK*
Ga0098040_122992423300006751MarineMSDNSKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLVSEHKKMI*
Ga0098055_106082023300006793MarineMSDNSKMNKTIFESYTDVINKGMKAGKDMSVAVKRLNHLVSEHKKMI*
Ga0066372_1050362513300006902MarineMSKKSTLNKTIFKSYTDVINNGMKAGRDMSIAVKRLNHLMSEHKKVK*
Ga0070746_1009868433300006919AqueousMNDSKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMTEHKKMK*
Ga0070748_106792453300006920AqueousKMNKVIFQSYTDVINKGMKAGKDMSLVAKRLNHLMSEHKKTI*
Ga0098060_103134623300006921MarineMSNSKTIKTIFESYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN*
Ga0098045_115640813300006922MarineTIFESYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN*
Ga0098046_112051013300006990MarineKGDIMSKSKTNKTIFQSYTDVINKGMKAGRDMSVAVNRLNHLMTEYKKMK*
Ga0102817_106640323300007555EstuarineMSNSKTIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVK*
Ga0098052_134966223300008050MarineMSDNSKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNYLVSEHKKVI*
Ga0102810_108904523300009002EstuarineMKSVSKMNKVIFQSYTDVINKGMRAGRDMSLLSKRLNHLMSEHKKTI*
Ga0114995_1073577413300009172MarineMKSVSKMNKVIFQSYTDVINKGMKAGKDMSTAVQRLNHLMSEHKKTI*
Ga0114908_122275613300009418Deep OceanMAKVKRPSTLDKTIFLSYQDAINNGMKAGKDVSVAVKRLNTLIAEHKK*
Ga0114932_1002610343300009481Deep SubsurfaceMSNNKMNKVIFQSYTDVINKGMKAGKDMTLVAKRLNHLMAEHKKMM*
Ga0114932_1018859823300009481Deep SubsurfaceMSKSKVQKTIFESYTDVINKGMKAGKDMSVAVKRLNHLVSEYKKVK*
Ga0114932_1058841823300009481Deep SubsurfaceMSKMNKVIFQSYTDVINKGMRAGKDMSLLSKRLNHLMSEH
Ga0115571_123476433300009495Pelagic MarineKMNKVIFQSYTDVINKGIRAGKDMSVAAKRLNHLMSEHKKTI*
Ga0115003_1007015693300009512MarineSKMNKTIFKSYTDVINTGIKAGKDMSVVVKRLNHLMSKYKKTV*
Ga0098043_122290813300010148MarineMSDNSKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLVSEHKKMK*
Ga0133547_1177578123300010883MarineMKNVSKMNKVIFQSYTDVINTGMKAGKDMTVAAKRLNHLMSEYKKTI*
Ga0160423_1018833923300012920Surface SeawaterMSDSKAKKTIFQSYTDVINKGMKAGKDMSVAVKRFNHLMSEHKKLK*
Ga0160423_1030014813300012920Surface SeawaterMNDSKMNKTIFQSYTDVINKGMKAGRDMSVAVKRLNHLVSEHKKMK*
Ga0163110_1042650223300012928Surface SeawaterMNDSKMNKTIFQSYTDVINKGMKAGRDMSVAVKRLNHLMTEHKKMK*
Ga0163179_1197221623300012953SeawaterMSNSKMIKTIFKSYTDVINNGMKAGKDMSVAVKRLNHLMTEYKKVN*
Ga0163111_1031074323300012954Surface SeawaterMSDSKINKTIFQSYTDVINKGMKAGRDMSVAVNRLNHLMTEYKKMK*
Ga0129327_1029464233300013010Freshwater To Marine Saline GradientVSKMNKVIFQSYTDVINKGIRAGKDMSVAAKRLNHLMSEHKKTI*
Ga0181372_102672723300017705MarineMSDNSKMNKTIFESYTDVINKGMKAGKDMSVAVKRLNYLVSEHKKVI
Ga0181369_109385423300017708MarineMSDSKMNKTIFESYTDVINKGMKAGKDMSVAVKRLNHLVSEHKKKI
Ga0181391_100523823300017713SeawaterMSNSKTIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKMK
Ga0181404_109006933300017717SeawaterKTIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKMK
Ga0181398_106180213300017725SeawaterDKVIFQSYTDVINKGMRAGRDMSLLSKRLNHLMSEHKKTI
Ga0181401_112034123300017727SeawaterSKTIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN
Ga0181419_107984723300017728SeawaterMSNSKTIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEYKKMK
Ga0181419_110217423300017728SeawaterMKSMSKMNKVIFQSYTDVINKGMKAGKDMSVAVKRLNHLVSEHKKMI
Ga0181416_102081823300017731SeawaterMSDNSKMNKTIFQSYTDVINKGMKAGKDMSVAVNRLNHLMTEYKKMK
Ga0181389_109653823300017746SeawaterMSKSKVQKTIFESYTDVINKGMKAGKDMSVAVKRLNHLMTE
Ga0181389_110841813300017746SeawaterSKTIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKMK
Ga0181405_103750113300017750SeawaterTIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN
Ga0181420_123841013300017757SeawaterMSKSKVQKTIFESYTDVINKGMKAGKDMSVAVNRLNHLM
Ga0181409_119796423300017758SeawaterGVIMSNSKTIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN
Ga0181414_106544913300017759SeawaterMSDNSKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLVSEYKKVK
Ga0181413_100275133300017765SeawaterMSKSKTNKTIFQSYTDVINKGMKAGKDMPVAVNRLNHLMTEYKKMK
Ga0181406_103058743300017767SeawaterMSNSKMIKKLFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN
Ga0181432_100049633300017775SeawaterMTSEKSKMNKTIFESYTDVINTGMKAGRDMSVAVKRLNYLMSEHKKSI
Ga0206125_1010547333300020165SeawaterMSNSKMIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN
Ga0211634_109656223300020279MarineMSNNKMNKVIFQSYTDVINKGMKAGKDMSLVAKRLNHLMSEHKKTI
Ga0211506_122662013300020365MarineMSISKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMAEHKKMK
Ga0211477_1026440923300020374MarineMSKSKVQKTIFESYTDVINKGMKAGKDMSVAVKRLNHLVSEYKKVK
Ga0211652_1018629823300020379MarineMSDSKAKKTIFQSYTDVINKGMKAGKDMSVAVKRFNHLMSEHKKLK
Ga0211497_1011299433300020394MarineMSDSKINKTIFQSYTDVINKGMKAGRDMSVAVKRLNHLVSEHKKMK
Ga0211699_1029355023300020410MarineMSKSKVQKTIFESYTDVINKGMKAGKDMSVAVKRLNHLVSEYKKMK
Ga0211699_1031897923300020410MarineMNDSKMNKTIFQSYTDVINSGMKAGKDMSVAVKRLNHLMTEYKKMK
Ga0211523_1019751233300020414MarineMNDSKMNKTIFQSYTDVINKGMKAGRDMSVAVKRLNHLVSEHKKMK
Ga0211653_1008615633300020421MarineMSNSKTIKTIFESYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN
Ga0211653_1018887023300020421MarineMSKSKTNKTIFQSYTDVINKGMKAGRDMSVAVNRLNHLMTEYKKMK
Ga0211521_1022517923300020428MarineMSNNKMNKVIFQSYTDVINKGMKAGKDMTLVAKRLNHLMAEHKKMM
Ga0211521_1025526623300020428MarineMKSMSKMNKVIFQSYTDVINKGMRAGKDMSLLSKRLNHLMSEHKKTI
Ga0211708_1022752823300020436MarineMSDSKVHKTIFESYTDVINKGMKAGRDMSVAVKRLNHLVSEYKKMK
Ga0211576_1007581023300020438MarineMKSMSKMNKVIFQSYTDVINKGMRAGRDMSLLSKRLNHLMSEHKKTI
Ga0211641_10006034133300020450MarineMSKSKIHKTIFESYTDVINSGMKAGKDMSVAVKRLNHLVSEYKKMK
Ga0211473_1036845023300020451MarineMKNDSKMNKTIFQSYTDVINSGMKAGKDMSVAVKRLNHLMTEYKKVN
Ga0211475_1045764423300020468MarineKGVTMSKSKVQKTIFESYTDVINKGMKAGKDMSVAVKRLNHLVSEYKKVK
Ga0211543_1026419723300020470MarineMSISKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMAEYKKMK
Ga0211614_1053483523300020471MarineMSDSKVHKTIFESYTDVINKGMKAGKDMSVAVKRLNHLMAEHKKMK
Ga0211547_1035256723300020474MarineMTSISKMNKTIFESYTDVINKGMKAGKDMSVAVKRLNHLVSEHKKMI
Ga0211547_1042586313300020474MarineMSNSKMIKTIFKSYTDVINNGMKAGKDMSVAVKRLNHLMTEYKKVN
Ga0211715_1028206023300020476MarineMSKKSTMNKTIFKSYTDVINNGMKAGRDMSVVVKRLNHLMAEHKK
Ga0211503_1033916423300020478MarineMSDISKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMSEHKKVI
Ga0206126_1012622133300020595SeawaterMKNVSKMNKVIFQSYTDVINKGIRAGKDMSVAAKRLNHLMSEHKKTI
Ga0213860_1007338823300021368SeawaterMNDSKMNKTIFQSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKMK
(restricted) Ga0233437_116942233300024259SeawaterMKSVSKMNKVIFQSYTDVINKGMRAGRDMSLLSKRLNHLMSEHKKTI
Ga0208792_106738723300025085MarineMSDNSKMNKTIFESYTDVINKGMKAGKDMSVAVKRLNHLVSEHKKMI
Ga0208011_108183313300025096MarineMSDSKMNKTIFESYTDVINNGMKAGRDMSIAVKRLNHLMSEHKKVK
Ga0208158_110382623300025110MarineMSNSKTIKTIFKSYTDVINNGMKAGKDMSVAVKRLNHLMTEHKKMK
Ga0209349_116272623300025112MarineMSDNSKMNKTIFQSYTDVINNGMKAGRDMSVAVKRLNHLMSEHKKKI
Ga0208790_105075923300025118MarineMSDSKMNKTIFRSYRDVIRSGKSVGKDMSVAEKRLNHLMSEHKKVK
Ga0209535_111202223300025120MarineMSNSKTIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN
Ga0209348_117564623300025127MarineMNDSKMNKTIFQSYTDVINKGMKAGRDMSVAVKRLNHLMTEHKKMK
Ga0208919_104073323300025128MarineMSDNSKMNKTIFESYTDVINKGMKAGKDMSVAVKRLNHLMTEHKKMK
Ga0209634_104408183300025138MarineMKSVSKMNKVIFQSYTDVINKGMKAGKDMSTAVQRLNHLMSEHKKTI
Ga0209634_122019323300025138MarineMKNVSKMNKVIFQSYTDVINTGMKAGKDMTVAAKRLNHLMSEYKKTI
Ga0209634_125077623300025138MarineMSDSKMNKTIFKSYTDVINTGIKAGKDMSVVVKRLNHLMSKYKKTV
Ga0209756_122790113300025141MarineDNSKMNKTIFESYTDVINKGMKAGKDMSVAVKRLNHLVSEHKKMI
Ga0209645_1004723133300025151MarineMSDSKINKTIFQSYTDVINKGMRAGRDMSVAVKRLNHLVSEHKKMK
Ga0209337_112550913300025168MarineSNSKMIKTIFKSYTDVINSGMKAGKDMSVAVKRLNHLMTEHKKVN
Ga0185543_104404433300029318MarineMSDSKAKKTIFQSYTDVINKGMKAGRDMSVAVKRFNHLMAEHKKLK
Ga0185543_107836423300029318MarineMSDSKINKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMAEYKKMK
Ga0183748_101222883300029319MarineMNDSKMNKTIFQSYTDVINKGMKAGKDMSVAVKRLNHLMTEHKKMK


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