Metagenome Family F090838

Overview

Basic Information

• Family ID: F090838
• Family Type: Metagenome
• Number of Sequences: 108
• Average Sequence Length: 47 residues
• Representative Sequence: LSDLQRREFHEALLEADSFEDLPGKWQAAILAAEQNRPKLRVVTGD
• Number of Associated Samples: 62
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 3.70 %
• % of genes near scaffold ends (potentially truncated): 46.30 %
• % of genes from short scaffolds (< 2000 bps): 81.48 %
• Associated GOLD sequencing projects: 58
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (52.778 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (41.667 % of family members)
• Environment Ontology (ENVO): Unclassified (41.667 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (56.481 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 37.84%
  β-sheet: 0.00%
  Coil/Unstructured: 62.16%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF12680	SnoaL_2	13.89
PF03861	ANTAR	2.78
PF10057	MpsC	1.85
PF07676	PD40	1.85
PF02322	Cyt_bd_oxida_II	0.93
PF13193	AMP-binding_C	0.93
PF07883	Cupin_2	0.93
PF12850	Metallophos_2	0.93
PF13683	rve_3	0.93
PF01654	Cyt_bd_oxida_I	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	2.78
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	0.93
COG4935	Regulatory P domain of the subtilisin-like proprotein convertases and other proteases	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG4829	Muconolactone delta-isomerase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG4607	ABC-type enterochelin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93
COG4594	ABC-type Fe3+-citrate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93
COG4592	ABC-type Fe2+-enterobactin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93
COG4558	ABC-type hemin transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.93
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.93
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	47.22 %
Unclassified	root	N/A	52.78 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	47.22 %
Unclassified	root	N/A	52.78 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.22 %
Unclassified	root	N/A	52.78 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.11 %
Unclassified	root	N/A	52.78 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.19 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %
Unclassified	root	N/A	52.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.93 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.19 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	10.19 %
Unclassified	root	N/A	52.78 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.93 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.78 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.56 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	3.70 %
Unclassified	root	N/A	52.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.56 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.56 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	2.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.78 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	0.93 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	3.70 %
Unclassified	root	N/A	52.78 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.85 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.56 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	2.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.78 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	0.93 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.85 %
Unclassified	root	N/A	52.78 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	3.70 %

Level 10

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.56 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.78 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	0.93 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.85 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	3.70 %
Unclassified	root	N/A	52.78 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	2.78 %

Level 11

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.93 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.56 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	2.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.78 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	0.93 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.85 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	3.70 %
Unclassified	root	N/A	52.78 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000033|ICChiseqgaiiDRAFT_c2323927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1110
3300000363|ICChiseqgaiiFebDRAFT_13677217	Not Available	545
3300000858|JGI10213J12805_10022502	Not Available	1863
3300003373|JGI25407J50210_10002711	All Organisms → cellular organisms → Bacteria	4212
3300003373|JGI25407J50210_10007593	All Organisms → cellular organisms → Bacteria	2719
3300003373|JGI25407J50210_10050475	Not Available	1055
3300004157|Ga0062590_102256938	Not Available	571
3300004463|Ga0063356_101016773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1185
3300004463|Ga0063356_102206503	Not Available	838
3300004479|Ga0062595_101584272	Not Available	609

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.07%
Host-Associated	Host-Associated	25.93%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.78%
Plants	Host-Associated → Plants	25.93%
Terrestrial	Environmental → Terrestrial	71.30%

Category

Habitat	Taxonomy	Distribution
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.93%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Phylloplane	Host-Associated → Plants → Phylloplane	1.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.04%
Roots	Host-Associated → Plants → Roots	8.33%
Sediment	Environmental → Aquatic → Sediment	0.93%
Soil	Environmental → Terrestrial → Soil	70.37%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.78%
Ice	Environmental → Aquatic → Freshwater → Ice	0.93%
Loam	Environmental → Terrestrial → Soil → Loam	1.85%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	8.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.26%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Subtype

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.26%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%

Habitat

Habitat	Taxonomy	Distribution
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.48%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	41.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	8.33%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.78%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23239271	3300000033	Soil	PPLCDMGDSQRREFHEALLDADAFEDLPGGWQAAVVRSEQNRLKLRLVGSPNAS*
ICChiseqgaiiFebDRAFT_136772173	3300000363	Soil	PPLSEMGDLQRRVFHEALLDADNLRRPAWERWQAAIVSAEQNRPQLRVVKED*
JGI10213J12805_100225021	3300000858	Soil	PPLSEMSVYQRREFHEALLEVDSFEDLPGKWQAAVLKEEKNRPNLRIVGSD*
JGI25407J50210_100027114	3300003373	Tabebuia Heterophylla Rhizosphere	MSAEQRREFHEALLDADSFEDLPGKWQAAILKAEQRRPKLRVVSGD*
JGI25407J50210_100075935	3300003373	Tabebuia Heterophylla Rhizosphere	MSELQRRELHEALLDADSFEDLPGKWQAAILKAEENRPNLRIVGGD*
JGI25407J50210_100504753	3300003373	Tabebuia Heterophylla Rhizosphere	PPLSEMGDRQRREFXEALLEANTFEDLPGKWQATILKAEENRPKLRVVSGD*
Ga0062590_1022569382	3300004157	Soil	ELGTDQRREFHEALLDADSVEDLPGKWQAAIVAAEQNSPKLRVVSGD*
Ga0063356_1010167732	3300004463	Arabidopsis Thaliana Rhizosphere	MGDLRRREFHEALLEAGGFEDLPGKWQAAIMEAEQNPPKLRVVTGE*
Ga0063356_1022065031	3300004463	Arabidopsis Thaliana Rhizosphere	EFHEALLDAGSFEDLSGRWQAAIVAAEQNRPQLRLIGSD*
Ga0062595_1015842722	3300004479	Soil	QRRECHEALLDADSFEDLPGKWRAAIVQAEQGQPNLRLVRD*
Ga0070691_108690311	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MGDLQRREFHEALLDADSFEDLPGKWQAAIVAAEQRRRRLRIVSGG*
Ga0070662_1014600051	3300005457	Corn Rhizosphere	QRREFHEALLETDSFEDPPGKWQAAIVKAEQNRSKLRLIGDD*
Ga0070696_1005774202	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGELQRREFHEALLDAGAFEDLPGKWQAAILEAEQNRPQLRVFTSD*
Ga0058697_102864641	3300005562	Agave	MSDLQRRDFHEALLDADAFEDLPGKWQAEILKAEENRPKLRIVGTE*
Ga0081538_1000192118	3300005981	Tabebuia Heterophylla Rhizosphere	MGDRQRREFHEALLEANTFEDLPGKWQATILKAEENRPKLRVVSGD*
Ga0081538_100098634	3300005981	Tabebuia Heterophylla Rhizosphere	MDDPQRREFHEALLDADGFADLPGKWQAAIMKSERNRPNLRIVGSD*
Ga0081538_100627742	3300005981	Tabebuia Heterophylla Rhizosphere	MSRLQRREFHESLLDSDAFEDLPSKWQAAILKAEENAPNLRIVGAG*
Ga0081538_101067104	3300005981	Tabebuia Heterophylla Rhizosphere	MSKLERREFHEALLHADGFEDLPGKWQAAILTAEQNRPSLRIVRS
Ga0081538_101152743	3300005981	Tabebuia Heterophylla Rhizosphere	MTDLERREFHEALPDADAFEDLPGKWQAAIFKAEQNRPKPRLVSDA*
Ga0081538_102282192	3300005981	Tabebuia Heterophylla Rhizosphere	MSDLQRREFHEALLDADRFEDLSGKWQVAILKAEGNRPNLRIVTS*
Ga0075432_103932381	3300006058	Populus Rhizosphere	QRREFHEALLDAGSFEDLPGEWQAAILEAEHNRPKMQVVRTD*
Ga0082029_16319832	3300006169	Termite Nest	MAADQRHEFHEALLDADSFEDLPGKWQPAIVKAEQEPPKLRVVNSD*
Ga0075428_1000750076	3300006844	Populus Rhizosphere	MNDTQRREFHEALLDAGSFDDLPGKWQAAVVAAEQNRPKLRVVSGD*
Ga0075420_1013905321	3300006853	Populus Rhizosphere	VGYPPLCDMGEDQRRECHEALLDADAFEDLPGKWQAAIVTAEQNRPKLRVVSGD*
Ga0079217_112414922	3300006876	Agricultural Soil	MDEQPRREFHEALLDADSFEDLPGKWQAAIVTAEQNQPKLRIVRH*
Ga0075429_1001768812	3300006880	Populus Rhizosphere	MNDTQRREFHEALLDAGSFDDLPGKWQAAVVAAEQNRPKLRLISND*
Ga0114129_108427343	3300009147	Populus Rhizosphere	MSDLQRREFHEALLEAATFEDLPGKWQAAIVLGEQNRPDLRIVGSD*
Ga0111538_127438622	3300009156	Populus Rhizosphere	REFQEALLDAHSFEDLPGKWQSAIVSAEQNQPKLRVVSRD*
Ga0126307_100055526	3300009789	Serpentine Soil	MGDLQRRDFHEALLEPDTFEDLAGKWQAAIVQTEQNRPTLRLIRSN*
Ga0126307_117098111	3300009789	Serpentine Soil	HEALLDADSFEDLPGKWQAAILKAEQNRPPLRVVTSD*
Ga0126313_100190539	3300009840	Serpentine Soil	MTGSAAEFQEALLDADSFDDLPGKWQAAILEAEQNRRKLRVVTGD*
Ga0126313_100355673	3300009840	Serpentine Soil	MDDRQRREFHEALLDANGFEDLPGKWQAAILEAEVQRPKLRLISDG*
Ga0126313_100446962	3300009840	Serpentine Soil	VSWRREFQEALLDAGSFEDLPGKWQAAIVRAEQNRPRLRVIGGD*
Ga0126313_101200182	3300009840	Serpentine Soil	MDDGQRREFREALLDADSFENLPGKWQAAILEAEQNRPPLRVVTSDRLAPS*
Ga0126313_101689263	3300009840	Serpentine Soil	MDAQQRREFHEALLDARVFDPGKWQAAILNAEAARPRLRLVSRD*
Ga0126313_103259932	3300009840	Serpentine Soil	MDDRQRRELHEALLDADGFEDLPGKWQAAILKAEAARPKLRVVSGD*
Ga0126313_103628133	3300009840	Serpentine Soil	APQRREFHEARLDAGSFEESAREVAAEQNRPKLRVVRDG*
Ga0126313_104203782	3300009840	Serpentine Soil	MDDRQRREFDEALLEAGSFEDLPGKWQAAILKAEQNRPKLRVVTGD*
Ga0126313_111800721	3300009840	Serpentine Soil	MSEGQRREFHEALLEAGTFEDLPGKWQAAILQAEQRRPKLRVVVSD*
Ga0126313_111866861	3300009840	Serpentine Soil	MDDRQRREFHEALLGAESFEDLPGKWQAAILEAEAGRPRLRVVTGD*
Ga0126313_112436742	3300009840	Serpentine Soil	MDDRQRRSSEALLDADALEDLPGKWQAAILKAEAARPQLRVVEGD*
Ga0126305_102529431	3300010036	Serpentine Soil	VELDDLQRREFHEALLEAGSFDDLSGKWQAAILQAEQNRPQLRVSSD*
Ga0126305_104473461	3300010036	Serpentine Soil	MSDLQRREFHEALLEPASFEDLPRKWQAAILAAEQNRPQRRLVNGD*
Ga0126305_109430142	3300010036	Serpentine Soil	MGDLQRRDFHEALLEADTFEDLAGKWQAAIVQTEQNRPTLRLIRSN*
Ga0126304_100814381	3300010037	Serpentine Soil	SWDDLQRREFHEALLEAGSFEDLPGKWQAAILEAEQNRPKLRLVTGD*
Ga0126304_101714941	3300010037	Serpentine Soil	MDERQRREFDEALLEADSFEDLPGKWQAAILKAEAARPQLRVVEGD*
Ga0126304_106072681	3300010037	Serpentine Soil	MSGPSRREFHEALLDADSFEDLPGKWQAAILKAEQNRPNLRVVRDG*
Ga0126304_107561673	3300010037	Serpentine Soil	EFHEALLEAGSFDDLSGKWQAAILQAEQNRPQLRVSSD*
Ga0126315_100482843	3300010038	Serpentine Soil	MDDRQRREFHEALLEADNFEDLPGKWQAAILKAEAARPELHVVEGE*
Ga0126315_103184763	3300010038	Serpentine Soil	VGYPPLVEIDDQQRREFHEALLDADSFEDLPGKWQAAILEAEQNRPKLLLVSDD*
Ga0126315_103370271	3300010038	Serpentine Soil	VGYSPLVEMDEKQRREFHEALLDAERFEDLPGKWQAAILEAEAARPQLRVLAGD*
Ga0126315_106564972	3300010038	Serpentine Soil	VGYPPLVEMDDRQRRELHEALLDADSFDDLPGKWQAAILKAEAARPLCP*
Ga0126315_108985112	3300010038	Serpentine Soil	DDRQRRELHEALLDADGFEDLPGKWQAAILKAEAARPKLRVVSGD*
Ga0126315_111717442	3300010038	Serpentine Soil	VGIDDRQRRELHEALLDADSFEDLPGKWEAAILTAEAARPQLRIIDED*
Ga0126308_100763404	3300010040	Serpentine Soil	SELGDLHRREFHEALLEAGVFADLPGKWHAAILKAEQARPMLRVVSGD*
Ga0126308_102624034	3300010040	Serpentine Soil	VGYPPLSEMGDLQRRDFHEALLEADTFEDLAGKWQAAIVQTEQNRPTLRLIRSN*
Ga0126308_107621042	3300010040	Serpentine Soil	SEMGDLQRRDFHEALLEADTFEDLAGKCQAAILKAEQHRPKLRLIRND*
Ga0126312_100415837	3300010041	Serpentine Soil	LDDRQRREFQEALLDADSFEDLPGKWQAAILEAEAARPNLRVVPGD*
Ga0126312_101072183	3300010041	Serpentine Soil	MDDRQRREFHEALLDAESLEDLPGKWQAAILEAEAARPQLRVVTGE*
Ga0126312_101328703	3300010041	Serpentine Soil	MDDGQRREFHEALLDADSFEELPGKWQAAILKAEQNRPKLRIVSRD*
Ga0126312_103873991	3300010041	Serpentine Soil	MSYLQKSPEFHQALVDAETFEDLSGKWQAAILKAEQNRPDLRIVG
Ga0126312_105204451	3300010041	Serpentine Soil	QRREFHEALLDANGFEDLPGKWQAAILEAEVQRPKLRLISDG*
Ga0126314_100564093	3300010042	Serpentine Soil	MGAQQRREFHEALLEAATLEDLPGKWQAAILKAERSRPKLRVIAGA*
Ga0126314_102322734	3300010042	Serpentine Soil	HEALLDADSFEDLPGKWQAAILEAEQNRPKLLLVSDD*
Ga0126314_105100941	3300010042	Serpentine Soil	MGVAQRREFHESLLGAETFEDLPGNWQAAILKAEQSRPNLRVVRSE*
Ga0126310_117299362	3300010044	Serpentine Soil	LVGYPPLCNMGDHQRREFHEALLDAHSFEDLPGKWQAAIVSAEQNQPKLRVVRRG*
Ga0126311_115796531	3300010045	Serpentine Soil	ASSTRPCSNADSFEDLPGKWQVAILKAEAARPQLRVVSRD*
Ga0126306_102105963	3300010166	Serpentine Soil	MGEQQRREFHEALLDADSFEDLPGKWQAAISKAEQTRPKLRLIRSH*
Ga0126306_102509052	3300010166	Serpentine Soil	MGDQQRREFHEALLDAGSFEDLPGKWQAAILKAEQNRPKLRLVTED*
Ga0126306_102637241	3300010166	Serpentine Soil	EMSDLQRRLVHEALLEAGSFDDLPGKWQAAILHAEQNRPRLRVVSGD*
Ga0126306_104500772	3300010166	Serpentine Soil	MDDRQRREFHEALLEADSFEDLLGKWQAAILKAEQNRPQLRVVTGD*
Ga0126306_111510222	3300010166	Serpentine Soil	EVQRREFQEALLEAGTFEGLPGKWQAAILEAEQNRPKLRVVSGG*
Ga0126306_117166571	3300010166	Serpentine Soil	MSDQQRREFQEALLAADSIEDLPGECQAAILEAEQNRPKLRIVAGD*
Ga0105239_109850102	3300010375	Corn Rhizosphere	MGDDQRREFHEALLDADSFEDLPGKWQAAVVTAEQNRPNLRVVTGD*
Ga0134127_115347413	3300010399	Terrestrial Soil	EFHEALLDGDSFEDLLGKWQAAVVKAELNRPKLRLIGDD*
Ga0134127_130975281	3300010399	Terrestrial Soil	GYPPLCDMSELQRREFHEALLDADSFEDLPGKWQAAIVTAELNRPQLRLVSSD*
Ga0137374_100049203	3300012204	Vadose Zone Soil	MSEEQRREFHEALLEADGFEDLPGKWQAAILKAEQNRPKLRVVSGD*
Ga0137368_104123311	3300012358	Vadose Zone Soil	AYPPLSEMGADQRREFQEALLEADSFEDLPGKWQAAVLAAEQNRPTFRVVSSE*
Ga0137368_106445931	3300012358	Vadose Zone Soil	GYPPLSEMSEEQRREFHEALLEADGFEDLPGKWQAAILKAEQNRPKLRVVSGD*
Ga0136614_103919581	3300012684	Polar Desert Sand	MGDLQRREFHEALLDADGFEDLPGKWQAAILKAEENRPNLRIVDSG*
Ga0162651_1000596491	3300012938	Soil	SELDELQRREFDVALLEAETFEDLPGKWQAATLEAEQNRPKLRVV*
Ga0132255_1060009651	3300015374	Arabidopsis Rhizosphere	LPLSELGDLQRREFHEALLEADSFEDLPGKWQAAIVEAEQNRPKLKLISND*
Ga0184625_105444723	3300018081	Groundwater Sediment	ASKGRQLPPLSELGELQRREFHEALLEDARFEDLAGKWQAAILKAEQNRPKLRLLSSA
Ga0190265_101970733	3300018422	Soil	MSDSQRRDFQESLLDDDSFKDLPGKWQASILKAEQNRRKLRPVSDA
Ga0190268_119602851	3300018466	Soil	EALLDAHSFEDLPGKWQAAIASAEQNQPKLRLVSRD
Ga0190270_106792321	3300018469	Soil	MRLARMRSGACARGAGERSEFHEALLEADAFEDLPGKWQAAILEAEQNRPKLRVV
Ga0190270_119487221	3300018469	Soil	GYAPLSELSDLQRREFHDALLEAATFEDLPGKWQAAIVEAEQSRPRLRVVTSD
Ga0190271_101716152	3300018481	Soil	MPAEQRREFHEAVLDADDFEDLPGKWQAAILGAEDNRPKLWVVGSD
Ga0190264_103641832	3300019377	Soil	MSDSQRRDFQESLLDDDSFEDPPGKWQASILKAEQNRRKLRPVSDA
Ga0190267_108137122	3300019767	Soil	MASVELSRRVAFHEALLDAQAFEDLARKWQAATLEEEQNRPDLRVVSDG
Ga0190267_110638511	3300019767	Soil	PPLSEMGDLQRREFHEALLEAATFQDLPGRWQAAILEAEQNRPKLRLISSA
Ga0210381_102056411	3300021078	Groundwater Sediment	DAAQHRELHEALLDADGFEDLPGKWQAAIVAAEQNRPKLRIFSSD
Ga0207688_108041122	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MGDDQRREFHEALLDADSFEDLPGKWQAAVVTAEQNRPNLRVVTGD
Ga0207687_102847301	3300025927	Miscanthus Rhizosphere	MGDLQRREFHEALLDADSFEDLPGKWQAAIVAAEQRRRRLRIVSGG
Ga0207690_105723141	3300025932	Corn Rhizosphere	PPLSELGDLQPRESHEALLEAGSFEDLPGRWQAAILAAEQNRR
Ga0207706_111891651	3300025933	Corn Rhizosphere	QRREFHEALLETDSFEDPPGKWQAAIVKAEQNRSKLRLIGDD
Ga0207712_102656663	3300025961	Switchgrass Rhizosphere	SEMSDGQRREFHEALLEAASFEDLPGKWQAAVVTAEQNRPKLRVVTGD
Ga0209481_106430241	3300027880	Populus Rhizosphere	MNDTQRREFHEALLDAGSFDDLPGKWQAAVVAAEQNRPKLRVVSGD
Ga0307319_100693392	3300028722	Soil	LSDLQRREFHEALLEADSFEDLPGKWQAAILAAEQNRPKLRVVTGD
Ga0307318_100046477	3300028744	Soil	QRRDFHEALLDADTSENLPGKWQAAILKAEENRPKLRLVADL
Ga0307320_101066751	3300028771	Soil	HDALPICYPPLSELSDLQRREFHEALLEADSFEDLPGKWQAAILAAEQNRPKLRVVTGD
Ga0307306_101845721	3300028782	Soil	EFHEALLEAETLEDLPGKWQAAIIGAEQARPKPPVVTSD
Ga0247827_111158861	3300028889	Soil	EMADLQRREFHEALLDAGSFEDLPGKWQEVILKAKQNRPELRVVSGD
Ga0247826_110553401	3300030336	Soil	LQRREFHEALLEAGSFEDLPGKWQAPIAKAEQNRPRLRVVTHD
Ga0299913_113744541	3300031229	Soil	KKVVASPPLCDMDDTQRREFHEALLDADGFEDLPGKWQAAILEAEQKRPKLRVV
Ga0310892_109161372	3300031858	Soil	MGDLQRREFHEALLEAGSFEDLPGWWQAAILKAEQNRPKLRLV
Ga0310884_107684022	3300031944	Soil	MGDLQRREFHEALLEAGSFEDLPGWWQATILKAEQNRPKLRLV
Ga0268251_100170361	3300032159	Agave	MSDLQRRDFHEALLDADAFEDLPGKWQAEILKAEENRPKLRIVGTE