Metagenome Family F090835

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090835
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	91 residues
Representative Sequence	MTDQDVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRV
Number of Associated Samples	82
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.19 %
% of genes near scaffold ends (potentially truncated)	30.56 %
% of genes from short scaffolds (< 2000 bps)	85.19 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (90.741 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (36.111 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.17% β-sheet: 0.00% Coil/Unstructured: 30.83%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF04545	Sigma70_r4	64.81
PF02775	TPP_enzyme_C	4.63
PF00753	Lactamase_B	4.63
PF12367	PFO_beta_C	3.70
PF07676	PD40	2.78
PF12838	Fer4_7	0.93
PF04392	ABC_sub_bind	0.93
PF00561	Abhydrolase_1	0.93
PF02697	VAPB_antitox	0.93
PF01855	POR_N	0.93
PF08450	SGL	0.93
PF03447	NAD_binding_3	0.93
PF12681	Glyoxalase_2	0.93
PF00069	Pkinase	0.93
PF12704	MacB_PCD	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.70
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.93
COG1753	Predicted antitoxin, CopG family	Defense mechanisms [V]	0.93
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.93
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.93
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.93
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.74 %
Unclassified	root	N/A	9.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.74 %
Unclassified	root	N/A	9.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.74 %
Unclassified	root	N/A	9.26 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	53.70 %
Unclassified	root	N/A	9.26 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	41.67 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.26 %
Unclassified	root	N/A	9.26 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	40.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.26 %
Unclassified	root	N/A	9.26 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.78 %
Acidobacteria bacterium 37-65-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	40.74 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.26 %
Unclassified	root	N/A	9.26 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.78 %
Acidobacteria bacterium 37-65-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	40.74 %
Unclassified	root	N/A	9.26 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	8.33 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.78 %
Acidobacteria bacterium 37-65-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	40.74 %
Unclassified	root	N/A	9.26 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	8.33 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.78 %
Acidobacteria bacterium 37-65-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	40.74 %
Unclassified	root	N/A	9.26 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	8.33 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.78 %
Acidobacteria bacterium 37-65-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	0.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2105861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	702	Open in IMG/M
3300000559\|F14TC_100872915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	514	Open in IMG/M
3300000956\|JGI10216J12902_100087418	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300000956\|JGI10216J12902_101681363	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	642	Open in IMG/M
3300000956\|JGI10216J12902_102880414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	935	Open in IMG/M
3300000956\|JGI10216J12902_106302119	All Organisms → cellular organisms → Bacteria → Proteobacteria	1824	Open in IMG/M
3300000956\|JGI10216J12902_107359808	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300000956\|JGI10216J12902_108187194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1234	Open in IMG/M
3300000956\|JGI10216J12902_108674292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1714	Open in IMG/M
3300000956\|JGI10216J12902_111159364	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300000956\|JGI10216J12902_113671802	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	2117	Open in IMG/M
3300001199\|J055_10006372	All Organisms → cellular organisms → Bacteria	7316	Open in IMG/M
3300004114\|Ga0062593_101014012	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300004114\|Ga0062593_101497028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	727	Open in IMG/M
3300004156\|Ga0062589_100014989	All Organisms → cellular organisms → Bacteria	3429	Open in IMG/M
3300004156\|Ga0062589_101612145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	643	Open in IMG/M
3300004156\|Ga0062589_102827435	Not Available	506	Open in IMG/M
3300004463\|Ga0063356_104083706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	628	Open in IMG/M
3300004480\|Ga0062592_100877063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	805	Open in IMG/M
3300004480\|Ga0062592_101575781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	633	Open in IMG/M
3300004643\|Ga0062591_100739781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	896	Open in IMG/M
3300004782\|Ga0062382_10116227	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005295\|Ga0065707_10623983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	677	Open in IMG/M
3300005336\|Ga0070680_100769767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	829	Open in IMG/M
3300005345\|Ga0070692_10342695	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005347\|Ga0070668_101358169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	647	Open in IMG/M
3300005441\|Ga0070700_101883228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	517	Open in IMG/M
3300005545\|Ga0070695_100579720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	878	Open in IMG/M
3300005548\|Ga0070665_100168427	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300005617\|Ga0068859_101642273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	710	Open in IMG/M
3300005719\|Ga0068861_102515144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	518	Open in IMG/M
3300005840\|Ga0068870_10346284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	952	Open in IMG/M
3300005844\|Ga0068862_100040499	All Organisms → cellular organisms → Bacteria	3960	Open in IMG/M
3300005844\|Ga0068862_101518929	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300006042\|Ga0075368_10153996	All Organisms → cellular organisms → Bacteria → Acidobacteria	961	Open in IMG/M
3300006048\|Ga0075363_100669667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	625	Open in IMG/M
3300006051\|Ga0075364_10089815	All Organisms → cellular organisms → Bacteria → Acidobacteria	2038	Open in IMG/M
3300006051\|Ga0075364_10555708	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300006169\|Ga0082029_1655120	All Organisms → cellular organisms → Bacteria	3433	Open in IMG/M
3300006177\|Ga0075362_10744208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	513	Open in IMG/M
3300006178\|Ga0075367_10312001	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300006196\|Ga0075422_10095920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1133	Open in IMG/M
3300006196\|Ga0075422_10507426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	548	Open in IMG/M
3300006844\|Ga0075428_100343790	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300006844\|Ga0075428_101768409	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006853\|Ga0075420_100048382	All Organisms → cellular organisms → Bacteria	3786	Open in IMG/M
3300006871\|Ga0075434_100472056	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1276	Open in IMG/M
3300006876\|Ga0079217_10262656	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300006876\|Ga0079217_10317291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	873	Open in IMG/M
3300006918\|Ga0079216_10431925	Not Available	841	Open in IMG/M
3300009094\|Ga0111539_12336353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	620	Open in IMG/M
3300009100\|Ga0075418_12211127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	600	Open in IMG/M
3300009111\|Ga0115026_10158422	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300009148\|Ga0105243_11753534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	651	Open in IMG/M
3300009156\|Ga0111538_13375814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	555	Open in IMG/M
3300009156\|Ga0111538_13485850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	546	Open in IMG/M
3300009610\|Ga0105340_1075375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1333	Open in IMG/M
3300010166\|Ga0126306_10515579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 37-65-4	947	Open in IMG/M
3300010399\|Ga0134127_12676715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	579	Open in IMG/M
3300010403\|Ga0134123_11185665	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300011440\|Ga0137433_1151231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	747	Open in IMG/M
3300012212\|Ga0150985_111899169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1087	Open in IMG/M
3300012212\|Ga0150985_118088806	Not Available	507	Open in IMG/M
3300012914\|Ga0157297_10356524	Not Available	571	Open in IMG/M
3300012916\|Ga0157310_10055600	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1160	Open in IMG/M
3300014326\|Ga0157380_10117807	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300014864\|Ga0180068_1068628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	592	Open in IMG/M
3300014880\|Ga0180082_1092697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	678	Open in IMG/M
3300015077\|Ga0173483_10849907	Not Available	532	Open in IMG/M
3300015258\|Ga0180093_1175422	Not Available	545	Open in IMG/M
3300018422\|Ga0190265_10115949	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300018422\|Ga0190265_10837803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1042	Open in IMG/M
3300018432\|Ga0190275_11698658	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300018466\|Ga0190268_10676675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	752	Open in IMG/M
3300018469\|Ga0190270_11303362	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300018476\|Ga0190274_10042603	All Organisms → cellular organisms → Bacteria	3216	Open in IMG/M
3300018476\|Ga0190274_13186954	Not Available	552	Open in IMG/M
3300018481\|Ga0190271_10341751	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300018481\|Ga0190271_11233057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	870	Open in IMG/M
3300019377\|Ga0190264_12156073	Not Available	517	Open in IMG/M
3300019884\|Ga0193741_1001601	All Organisms → cellular organisms → Bacteria	6603	Open in IMG/M
3300020020\|Ga0193738_1044113	Not Available	1358	Open in IMG/M
3300021339\|Ga0193706_1062633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1029	Open in IMG/M
3300021972\|Ga0193737_1025072	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300023072\|Ga0247799_1078431	Not Available	576	Open in IMG/M
3300025917\|Ga0207660_10103317	All Organisms → cellular organisms → Bacteria	2132	Open in IMG/M
3300025930\|Ga0207701_10177658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1879	Open in IMG/M
3300025937\|Ga0207669_11110749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	668	Open in IMG/M
3300025972\|Ga0207668_10220048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1524	Open in IMG/M
3300027886\|Ga0209486_10057364	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1967	Open in IMG/M
3300028379\|Ga0268266_10202168	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300028380\|Ga0268265_12003520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	586	Open in IMG/M
3300031366\|Ga0307506_10038325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1329	Open in IMG/M
3300031538\|Ga0310888_10222399	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1048	Open in IMG/M
3300031547\|Ga0310887_10058765	All Organisms → cellular organisms → Bacteria → Acidobacteria	1761	Open in IMG/M
3300031548\|Ga0307408_100369165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1223	Open in IMG/M
3300031548\|Ga0307408_102206725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	532	Open in IMG/M
3300031908\|Ga0310900_10520814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	927	Open in IMG/M
3300031944\|Ga0310884_10898370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	546	Open in IMG/M
3300032000\|Ga0310903_10003855	All Organisms → cellular organisms → Bacteria	4095	Open in IMG/M
3300032012\|Ga0310902_10166112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	1265	Open in IMG/M
3300032012\|Ga0310902_10746842	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300032013\|Ga0310906_10013180	All Organisms → cellular organisms → Bacteria	3254	Open in IMG/M
3300032013\|Ga0310906_11197022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	552	Open in IMG/M
3300032179\|Ga0310889_10002568	All Organisms → cellular organisms → Bacteria	5008	Open in IMG/M
3300032179\|Ga0310889_10654457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	546	Open in IMG/M
3300032211\|Ga0310896_10036226	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300033408\|Ga0316605_10216262	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.52%
Host-Associated	Host-Associated	31.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.11%
Plants	Host-Associated → Plants	31.48%
Aquatic	Environmental → Aquatic	7.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.33%
Roots	Host-Associated → Plants → Roots	5.56%
Sediment	Environmental → Aquatic → Sediment	4.63%
Freshwater	Environmental → Aquatic → Freshwater	2.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.48%
Loam	Environmental → Terrestrial → Soil → Loam	5.56%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.04%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.48%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.41%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	5.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.85%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.93%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.93%
Lotic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic	0.93%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001199	Lotic microbial communities from nuclear landfill site in Hanford, Washington, USA - IFRC combined assembly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_21058612	3300000033	Soil	MTDQEVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILXAIEISGR
F14TC_1008729151	3300000559	Soil	MTEXDVLRKALNEIDSLRYRWGWTFGIMAAISQAAWIALLMGTTSASDRQLLLLATLALACTVFGGVFLLVLLIFRMTHKLLQAIEVSGRRP*
JGI10216J12902_1000874182	3300000956	Soil	MNDQDVLRKALNEIDGYRYRMGWGFGVTAALSQAAWIGVVLGSRQATDRTLILLCAAAVAMTVFGGVFMLTLVIYRMTHKLLLAIEIAARRD*
JGI10216J12902_1016813631	3300000956	Soil	MSDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIAVLIGSRQSSDRQLILLCAFAVAMTVFGGVFMLTLVLYRMTHKLLQAIEIAARRD*
JGI10216J12902_1028804141	3300000956	Soil	MSDQDVLRKALNEIDGYRYRMGWGFGITAAISQAAWIAVMIGSRQSSDRQLILLCAFAVAMTVFGGVFMLTLVTYRMTHKILQAIEIAGRRV*
JGI10216J12902_1063021193	3300000956	Soil	MTDQAETVLRKSLDEIDGYRRRWVITFWITAALSQAAWIAFVIGAKNATEKGTILLATFALAMTVFGGVFLLVLLIFRMTHKILQAIQLAARV*
JGI10216J12902_1073598082	3300000956	Soil	MTDQDVLRKALNEIDGLRYRWGWTFGIMAALSQAAWIALVIGAQNASEKTLILLATFALATTVFGGVFMLVLLIFRMTHKLLQAIELSGRRA*
JGI10216J12902_1081871942	3300000956	Soil	MTDQEVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRV*
JGI10216J12902_1086742922	3300000956	Soil	MTDQDVLRKALNEIDGLRYRWGWTFGITAALSQAAWITLVIGAQNASEKQLILLATLALASTVFGGVFMLVLLIFRMTHKLLQAIELSGRRA*
JGI10216J12902_1111593642	3300000956	Soil	MTGDASVVLRKSLDEIDNYRKRTVITFGVTAALSQAAWIALIIGVNRADVKTTIVLASLALAMTVFGGVFMLALLIFRVTHRLLKAIEVGVQR*
JGI10216J12902_1136718022	3300000956	Soil	MTDQDVLRKALNEIDGLRYRMGWGFGITAAISQAAWIAVLIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKLLQAIEIAGRRD*
J055_100063726	3300001199	Lotic	MSDQEVLRKALNEIEGYRYRWGWSFGITAALSQAAWMLLIFGSPAASDKQTILMAALAVAMTVFGGVFLLVLLIYRMTHKILQAIEVGARRHP*
Ga0062593_1010140122	3300004114	Soil	MTDQDVLRKALNEIDGLRYRWGWTFGIMAAISQAAWIALLIGSGRATEKQLILLATLALACTVFGGVFLLVLLIFRMTHKVLQAIEISARN*
Ga0062593_1014970282	3300004114	Soil	MTDQDVLRKALNEIDSLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHK
Ga0062589_1000149894	3300004156	Soil	MTDQDVLRKALNEIDSLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRV*
Ga0062589_1016121452	3300004156	Soil	MTDQEVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTRKILQAIEISGRRVG*
Ga0062589_1028274352	3300004156	Soil	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISARR*
Ga0063356_1040837062	3300004463	Arabidopsis Thaliana Rhizosphere	MTDQEVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRVS*
Ga0062592_1008770632	3300004480	Soil	MTDQDVLRKALNEIDSLRYRWGWTFGIMAAISQAAWIALLMGTGSANDRQLLLLATLALACTVFAGVFLLVLLIFRMTHKLLQAIELSGRRS*
Ga0062592_1015757811	3300004480	Soil	MTDQEVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTRKILQAIEISGRRVG
Ga0062591_1007397812	3300004643	Soil	MTDQEVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQANDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRV*
Ga0062382_101162272	3300004782	Wetland Sediment	MTDEETLRRALNEIDRYRYRWGWTFGITAALSQAAWIALVMASRRASERELILFAALAVVMTVFGGVFLLVLLIYRMTHKLLQAIEIAARRV*
Ga0065707_106239832	3300005295	Switchgrass Rhizosphere	MTDQDVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYR
Ga0070680_1007697672	3300005336	Corn Rhizosphere	MTDQDVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIGSRRV*
Ga0070692_103426952	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIAARRA*
Ga0070668_1013581691	3300005347	Switchgrass Rhizosphere	MTEQDVLRKALNEIDSLRYRWGWTFGIMAAISQAAWIALLMGTRSASDRQLLLLATLALACTVFGGVFLLVLLIFRMTHKLLQAIEVSGRRP
Ga0070700_1018832281	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQDVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEI
Ga0070695_1005797201	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEI
Ga0070665_1001684274	3300005548	Switchgrass Rhizosphere	MTDQDVLRKALNEIDSLRYRWGWTFGIMAALSQAAWITLILASKNATEKQLILLAALAVACTVFGGVFLLVLLIFRMTHKLLQAIEVSGRRA*
Ga0068859_1016422731	3300005617	Switchgrass Rhizosphere	ALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIAARRA*
Ga0068861_1025151442	3300005719	Switchgrass Rhizosphere	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKI
Ga0068870_103462841	3300005840	Miscanthus Rhizosphere	MTDQDVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHK
Ga0068862_1000404994	3300005844	Switchgrass Rhizosphere	MTEQDVLRKALNEIDSLRYRWGWTFGIMAAISQAAWIALLMGTRSASDRQLLLLATLALACTVFGGVFLLVLLIFRMTHKLLQAIEVSGRRP*
Ga0068862_1015189292	3300005844	Switchgrass Rhizosphere	MTDQDVLRKALNEIDGLRYRWGWTFGIMAALSQAAWIALIIGARNASEKQLILLATFALACTVFGGVFMLVLLIFRMTHKLLQAIELSGRRA*
Ga0075368_101539962	3300006042	Populus Endosphere	MTDQDVLRKALNEIDGLRYRWGWTFGIMAALSQAAWIALVIGAQNASEKTLILLATLALATTVFGGVFMLVLLIFRMTHKLLQAIEMSGRRA*
Ga0075363_1006696671	3300006048	Populus Endosphere	MTDQDVLRKALNEIDGLRYRWGWTFGIMAALSQAAWIALVIGAQNASEKTLILLATLALATTVFGGVFMLVLLIFRMTHKLLQAIELSGRRA*
Ga0075364_100898153	3300006051	Populus Endosphere	MTDQDVLRRALNEIDTLRYRWTWTFGITAALSQAAWIALVIGAKNASEKQLILLATFALACTVFGGVFLLVLLIFRMTHKLLQAIEVSGRGA*
Ga0075364_105557082	3300006051	Populus Endosphere	MTDQDVLRKALNEIDGLRYRWGWTFGIMAALSQAAWIALLIGARNASEKQLILLATFALACTVFGGVFMLVLLIFRMTHKLLQAIELSGRRA*
Ga0082029_16551207	3300006169	Termite Nest	MTDQDVLRKALNEIDSYRYRWGWTFGIMAALSQGAWIALVIGSRNATEKQTILLATLALACTVFGGVFLLVLHIFRMTHKVLQAIEIAARRE*
Ga0075362_107442082	3300006177	Populus Endosphere	MTDQDVLRKALNEIDSLRYRWGWTFGIMAAITQFAWIALLMGTKSASDRQLILLATLALACTVFGGVFLLVLLIFRMTH
Ga0075367_103120012	3300006178	Populus Endosphere	MTDQDVLRRALNEIDTLRYRWTWTFGIMAALSQAAWIALVIGAKNASEKQLILLATFALACTVFGGVFLLVLLIFRMTHKLLQAIEVSGRGA*
Ga0075422_100959202	3300006196	Populus Rhizosphere	MTDQDVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRV*
Ga0075422_105074262	3300006196	Populus Rhizosphere	MSDQDVLRNALNEIDGYRYRMGWGFGITAAISQAAWIAVMIGSRQSSDRQLILLCAFAVAMTVFGGVFMLTLVTYRMTHKILQAIE
Ga0075428_1003437902	3300006844	Populus Rhizosphere	MSDQDVLRNALNEIDGYRYRMGWGFGITAAISQAAWIAVMIGSRQSSDRQLILLCAFAVAMTVFGGVFMLTLVTYRMTHKILQAIEVSGRRD*
Ga0075428_1017684091	3300006844	Populus Rhizosphere	LRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRV*
Ga0075420_1000483823	3300006853	Populus Rhizosphere	MTDQDVLRKALNEIDSLRYRWGWTFGIMAAITQFAWIALLMGTKSASDRQLILLATLALACTVFGGVFLLVLLIFRMTHKLLLAIELSARRA*
Ga0075434_1004720561	3300006871	Populus Rhizosphere	MTDQDVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKLLQAIEVSSRRV*
Ga0079217_102626562	3300006876	Agricultural Soil	MTDQEVLRKALNEIDSYRYRWQWTFGVMAAISQIAWTALAFGTRNASDRTLILMAAVAVACTVFGGVFLLVLQNFRMTHKLLQAIEIAARRD*
Ga0079217_103172912	3300006876	Agricultural Soil	MTDQDALRKALNEIDSLRYRWGWTFGIMAAISQAAWIALLMGTRSASDRQLLLLATLALACTVFGGVFLLVLLIFRMTHKLLQAIELSGRRP*
Ga0079216_104319251	3300006918	Agricultural Soil	SLRYRWGWTFGIMAAISQAAWIALLMGTRSASDRQLLLLATLALACTVFGGVFLLVLLIFRMTHKLLQAIELSGRRP*
Ga0111539_123363532	3300009094	Populus Rhizosphere	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVLIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIAARRA*
Ga0075418_122111272	3300009100	Populus Rhizosphere	MSDQDVLRNALNEIDGYRYRMGWGFGITAAISQAAWIAVMIGSRQSSDRQLILLCAFAVAMTVFGGVFMLTLVTYRMTHKILQAIEISRRP*
Ga0115026_101584222	3300009111	Wetland	MTDQDILRKALNEIDSYRYRWIWTFGITAALSQAVWTVLALNATHFTERQLILWAALAVAMTVFGGVFLLVLLIFRMTHKLLLAIEIAARARQG*
Ga0105243_117535342	3300009148	Miscanthus Rhizosphere	MGWRHCADITQGRTMTDQDVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIAARRA*
Ga0111538_133758142	3300009156	Populus Rhizosphere	RRCAGITPRENNMTDQDVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIGSRRV*
Ga0111538_134858502	3300009156	Populus Rhizosphere	MTDQDVLRKALNEIDSLRYRWGWTFGIMAAISQAAWIALLMGTRSASDRQLLLLATLALACTVFGGVFLLVLLIFR
Ga0105340_10753751	3300009610	Soil	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLMLLCAFAGAMTVFGGVFMLTLVI
Ga0126306_105155792	3300010166	Serpentine Soil	MIDASGVLRKSLDEIDSYRKRWLYTFAVTALLSQLAWFALIFGSKHADEKTTILLATLALAMTIFGGVFMLVLLIFNMTHKVLKAIEVGMQR*
Ga0134127_126767151	3300010399	Terrestrial Soil	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIGSRRV*
Ga0134123_111856652	3300010403	Terrestrial Soil	MSDQDVLRKALNEIDGYRYRMGWGFGITAAMSQAAWIAVMIGSRQSSDRQLILLCAFAGAMTIFGGVFMLTLVIYRMTHKILQAIEVSGRRD*
Ga0137433_11512311	3300011440	Soil	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLMLLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISSRRV*
Ga0150985_1118991693	3300012212	Avena Fatua Rhizosphere	MTDQDVLRKALNEIDGLRSRTWTFGIMAAVAQGVWLVLLIGAKNASEKDLILLATLGLTCTVFGGVFLLVVVIYRMTHKLLQAIEVSGRRA*
Ga0150985_1180888061	3300012212	Avena Fatua Rhizosphere	DQDVLRKALNEIDGLRSRTWTFGIMAAVSQGVWLVLLIGAKSASEKELILLATLGLTCTVFGGVFLLVHVIYRMTHKVLQAIEVSGRRA*
Ga0157297_103565242	3300012914	Soil	VRIVDPAAVQIRGKLMTDQDVLRKALNEIDGLRYRWGWTFGIMAAISQAAWIALLIGSGRATEKQLILLATLALACTVFGGVFLLVLLIFRMTHKVLQAIEISARN*
Ga0157310_100556001	3300012916	Soil	NEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIGSRRV*
Ga0157380_101178074	3300014326	Switchgrass Rhizosphere	MSDQDVLRKALNEIDGLRYRMGWGFGLTAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKLLQAIEVSSRRV*
Ga0180068_10686282	3300014864	Soil	MTDQEVLRKALNEIDGLRYRRGWGFGITAAISQAAWIGVVIGSRQSSDRQLMLLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISSRRV*
Ga0180082_10926971	3300014880	Soil	NEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLMLLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISSRRV*
Ga0173483_108499072	3300015077	Soil	VSDDAEAVLRKALNEIDGYRKRWRWTFGITAAISQAVWIGFILSAEKASEKLLILMATFALAMTVFGGVFMLALLIFRMTHKLLQAIEVSARR*
Ga0180093_11754221	3300015258	Soil	MGWRHCADTTKVRLMTDQDVLRKALNEIDSLRYRRAWTFGIMEALSQAAWIALVIGANNASEKQLILMATLALACTVFGGVFLLVLLIFRMTHK
Ga0190265_101159492	3300018422	Soil	MTDQDVLRKALNEIDSLRYRWGWTFGIMAAISQAAWIALLMGTRSASDRQLLLLATLALACTVFGGVFLLVLLIFRMTHKLLQAIEVSGRRP
Ga0190265_108378032	3300018422	Soil	MTDQEVLRKALNEIDSYRYRWGWAFGITAALSQAAWIALAIGSRNASERQLILLAALAVAMTVFGGVFMLVLHIIRMTQKIVQAIEIAARPAPGRD
Ga0190275_116986582	3300018432	Soil	MTDDASAVLRKSLDDIDNYRKRWVYTFGITALLSQLAWFALILGFERASEKTTILLATFALAMTVFGGVFMLVLLIFRMTHKILKAIEVGMQR
Ga0190268_106766751	3300018466	Soil	VTDHAEILLRKSLDEIDSYRRRWAVTFGITAALSQAAWIALIIGSHRASEKQTILLATLALAMTVFGGVFLLVLLIFRMTHKILQAVEVGSRRNV
Ga0190270_113033622	3300018469	Soil	MTDQEVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIGSRRV
Ga0190274_100426035	3300018476	Soil	MIDDASGVLRKSLDEIDSLRKRGVYIFGFTALLSQLAWFALILGAERASEKTTILLATFALAMTVFGGVFMLSLLIFRMTHRVLKAIEVGMQR
Ga0190274_131869541	3300018476	Soil	MTDQDVLRKALNEIDGLRYRWGWTFGIMAAIYQAAWIALLIGSGRATEKQLILLATLALACTVFGGVFLLVLLIFRMTHKLLQAIEISART
Ga0190271_103417511	3300018481	Soil	MTDQDVLRKALNEIDGLRFRMGWGFGITAAISQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIGSRRV
Ga0190271_112330571	3300018481	Soil	MTDQDVLRKALNEIDSYRYRWGWSFGIMAAISQAAWIALAFGSRSATERQLILLSAFAVACTVFGGVFLLVLLTFRMTHKILQAIEISARR
Ga0190264_121560732	3300019377	Soil	MSDQEVLRKALNEIDGYRYRWGWSFGITAALSQAAWLAVVFGSNSATERQLILLCALAVAMTVFGGVFLLVLQSFRMTHKILQAIEIGSRRV
Ga0193741_10016015	3300019884	Soil	MTDQDVLRKALNEIDGLRYRWVWSFGITAALSQAAWIAVVVGSRQASDRQLILLCAFAVAMTVFGGVFLLVLQSFRMTHKILQAIEISGRRV
Ga0193738_10441131	3300020020	Soil	MASRHCASITQRENNMTDQEVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKVLQAIEISGRRV
Ga0193706_10626332	3300021339	Soil	MSEQDVLRKALNEIDGLRYRWQWSFGITAALSQAAWIAVVIGSRQATDRQLILLCALAVAMTVFGGVFMLTLLIFRMTLKILQAIEVGARRD
Ga0193737_10250722	3300021972	Soil	MTDQEVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKVLQAIEISGRRV
Ga0247799_10784312	3300023072	Soil	MTDQDVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRV
Ga0207660_101033172	3300025917	Corn Rhizosphere	MTDQDVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIGSRRV
Ga0207701_101776582	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTDQDVLRNALNEIDRLRYRWGWTFGIMAALSQAAWIALVLGARSATEKQLILLAAFAVACTVFGGVFLLVLLIFRMTHKLLLAIELSARRA
Ga0207669_111107491	3300025937	Miscanthus Rhizosphere	NHGWPTVLRRCAGNTQREDNMSDQDVLRKALNEIDGYRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIAARRA
Ga0207668_102200483	3300025972	Switchgrass Rhizosphere	MTDQDVLRKALNEIDGLRYRWGWTFGIMAALSQAAWIALIIGARNASEKQLILLATFALACTVFGGVFMLVLLIFRMTHKLLQAIELSGRRA
Ga0209486_100573643	3300027886	Agricultural Soil	MTDQEVLRKALNEIDSYRYRWQWTFGVMAAISQIAWTALAFGTRNASDRTLILMAAVAVACTVFGGVFLLVLQNFRMTHKLLQAIEIAARRD
Ga0268266_102021684	3300028379	Switchgrass Rhizosphere	MTDQDVLRKALNEIDSLRYRWGWTFGIMAALSQAAWITLILASKNATEKQLILLAALAVACTVFGGVFLLVLLIFRMTHKLLQAIEVSGRRA
Ga0268265_120035201	3300028380	Switchgrass Rhizosphere	MTDQDVLRKALNEIDGLRYRWGWTFGIMAALSQAAWIALIIGARNASEKQLILLATFALACTVFGGVFMLVLLIFRMTHKLLQAIELSGRR
Ga0307506_100383253	3300031366	Soil	MTDQDVLRKALNEIDSLRSRTWTFGIMAALAQGVWLALLIGAKNASEKELILLATLGLTCTVFGGVFLLVLVIHRMTHKLLQAIEVSGRRA
Ga0310888_102223992	3300031538	Soil	NMTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIAARRA
Ga0310887_100587652	3300031547	Soil	RKALNEIDSLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRV
Ga0307408_1003691651	3300031548	Rhizosphere	MTDQEVLRKALNEIDSYRYRWGWTFGIMAALSQGAWIALVIGSRNATEKQTILLATLALACTVFGGVFLLVLHIFRMTHKVLQAIEIAARRE
Ga0307408_1022067251	3300031548	Rhizosphere	MTDQDVLRKALNEIDGLRYRWAWTFGIMAALSQAAWIALVIGAKNASEKQLILLATFALACTVFGGVFMLVLLIFR
Ga0310900_105208143	3300031908	Soil	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVI
Ga0310884_108983702	3300031944	Soil	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIAARRA
Ga0310903_100038555	3300032000	Soil	MTDQDVLRKALNEIDSLRFRMGWGFGITAAMSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIGSRRV
Ga0310902_101661122	3300032012	Soil	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEVSGRRD
Ga0310902_107468422	3300032012	Soil	MTGDASEVLRKSLDEIDNYRKRGMIIFGVTAALSQAAWIALGIGVSRADVKTTIVLASLAVAMTVFGGVFMLALLIFRVTHRILKAIEVGMQR
Ga0310906_100131802	3300032013	Soil	MTDQDVLRKALNEIDGLRFRMGWGFGITAAMSQAAWIAVVIASRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRV
Ga0310906_111970221	3300032013	Soil	MTDQEVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIAA
Ga0310889_100025683	3300032179	Soil	MTDQDVLRKALNEIDGLRFRMGWGFGITAAVSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEIGSRRV
Ga0310889_106544571	3300032179	Soil	MSDQDVLRKALNEIDGLRYRMGWGFGITAAISQAAWIGVVIGSRQSSDRQLILLCAFAGAMTVFGGVFMLTLVMYRMTHKILQAIEISARR
Ga0310896_100362262	3300032211	Soil	MTDQDVLRKALNEIDSLRFRMGWGFGITAAVSQAAWIAVVIGSRQASDRQLILLCAFAGAMTVFGGVFMLTLVIYRMTHKILQAIEISGRRV
Ga0316605_102162622	3300033408	Soil	MTDQDILRKALNEIDSYRYRWIWTFGITAALSQAVWTVLALNATHFTERQLILWAALAVAMTVFGGVFLLVLLIFRMTHKLLLAIEIAARARQG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090835

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences