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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F090807 |
| Family Type | Metagenome |
| Number of Sequences | 108 |
| Average Sequence Length | 68 residues |
| Representative Sequence | MTHKLTGREVYDALREQRQGHTGEYIAGFSTWIDGKVCFDALALRLNKIIVANCNHDAVVRAVTGED |
| Number of Associated Samples | 81 |
| Number of Associated Scaffolds | 108 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | No |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 23.15 % |
| % of genes near scaffold ends (potentially truncated) | 21.30 % |
| % of genes from short scaffolds (< 2000 bps) | 91.67 % |
| Associated GOLD sequencing projects | 72 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.27 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (70.370 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (16.667 % of family members) |
| Environment Ontology (ENVO) | Unclassified (26.852 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (52.778 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 37.89% β-sheet: 0.00% Coil/Unstructured: 62.11% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.27 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 108 Family Scaffolds |
|---|---|---|
| PF08238 | Sel1 | 4.63 |
| PF00248 | Aldo_ket_red | 1.85 |
| PF00230 | MIP | 1.85 |
| PF01740 | STAS | 1.85 |
| PF13564 | DoxX_2 | 0.93 |
| PF01381 | HTH_3 | 0.93 |
| PF05951 | Peptidase_M15_2 | 0.93 |
| PF08818 | DUF1801 | 0.93 |
| PF03795 | YCII | 0.93 |
| PF05199 | GMC_oxred_C | 0.93 |
| PF00924 | MS_channel | 0.93 |
| PF07238 | PilZ | 0.93 |
| PF07676 | PD40 | 0.93 |
| PF05721 | PhyH | 0.93 |
| COG ID | Name | Functional Category | % Frequency in 108 Family Scaffolds |
|---|---|---|---|
| COG0580 | Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) | Carbohydrate transport and metabolism [G] | 1.85 |
| COG0668 | Small-conductance mechanosensitive channel | Cell wall/membrane/envelope biogenesis [M] | 0.93 |
| COG2303 | Choline dehydrogenase or related flavoprotein | Lipid transport and metabolism [I] | 0.93 |
| COG2350 | YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.93 |
| COG3108 | Uncharacterized conserved protein YcbK, DUF882 family | Function unknown [S] | 0.93 |
| COG3264 | Small-conductance mechanosensitive channel MscK | Cell wall/membrane/envelope biogenesis [M] | 0.93 |
| COG4430 | Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family | Function unknown [S] | 0.93 |
| COG5285 | Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family | Secondary metabolites biosynthesis, transport and catabolism [Q] | 0.93 |
| COG5646 | Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis) | Posttranslational modification, protein turnover, chaperones [O] | 0.93 |
| COG5649 | Uncharacterized conserved protein, DUF1801 domain | Function unknown [S] | 0.93 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 70.37 % |
| All Organisms | root | All Organisms | 29.63 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 16.67% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 14.81% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 13.89% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.56% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.63% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 4.63% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 4.63% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 2.78% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 2.78% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.78% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.78% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.78% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.85% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.85% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.85% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.85% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.93% |
| Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 0.93% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.93% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.93% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.93% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 0.93% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.93% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.93% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.93% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2170459024 | Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml) | Environmental | Open in IMG/M |
| 3300000559 | Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001867 | Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705) | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300005104 | Soil and rhizosphere microbial communities from Laval, Canada - mgHAC | Environmental | Open in IMG/M |
| 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
| 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
| 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
| 3300005526 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 | Environmental | Open in IMG/M |
| 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
| 3300007258 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 | Environmental | Open in IMG/M |
| 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
| 3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
| 3300012582 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG | Environmental | Open in IMG/M |
| 3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
| 3300012924 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300015241 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300020140 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300024288 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal | Environmental | Open in IMG/M |
| 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026475 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A | Environmental | Open in IMG/M |
| 3300026490 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A | Environmental | Open in IMG/M |
| 3300027050 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027061 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027502 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027821 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031128 | Oak Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
| 3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
| 3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
| 3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| FD1_03217590 | 2170459024 | Grass Soil | MTRKLTGREVYDALREHLQVYSGEYAGEYVAGVSTWIHGKVCFDALALRLNEITFANGNHDAVVRAVTGED |
| F14TC_1031141671 | 3300000559 | Soil | MPEAEDGMTHKRTGREVYDALREQRQGHPREGKAGEVCFDALALRLNESTVDNGNHDAVVRAITGED* |
| JGI1027J12803_1044055861 | 3300000955 | Soil | MPEAEDGMTHKRTGREVYDAPSEQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAVVRAITGE |
| JGI1027J12803_1045508702 | 3300000955 | Soil | MPHKRTGREVYDALREQGQGHPGEDKAGEVRFDDLALHLNESTVDNGNHDAVVRAITGED |
| JGI12627J18819_101417642 | 3300001867 | Forest Soil | MTHKLTGREVYDAVCEQRQGHTGEYIAGSSTWIDGKVCFDTLALRLNKIIVANCNHDAVVRAVTGED* |
| JGI12627J18819_103071682 | 3300001867 | Forest Soil | MPETEDGMTHKLTGREVHDAVREQRQGLTGEYIAPSSTCIDGEVCFDALALRLNKIIVANGNHDAVVRA |
| Ga0062593_10000626610 | 3300004114 | Soil | MPEAEDGMTHKRTGREVYDALREQGQGHPREYKAREVCFDALALRLNETTVDNGNHDAVVRAVTGED* |
| Ga0062592_1000294436 | 3300004480 | Soil | MTHKRTGREVYDALREQGQGHPREYKAREVCFDALALRLNETTVDNGNHDAVVRAVTGED |
| Ga0066818_10198201 | 3300005104 | Soil | MTHKLTGREVYDALRELRQGHPGEYIAGSGTYIDGKVCIDTLALRLNEIIVAHGNHDAVMRAVTGED* |
| Ga0065704_102997041 | 3300005289 | Switchgrass Rhizosphere | MIHKLTGREVYDARREQRQGHSGEYIAGFSTWAGGKVCFDALAPRLNETTVANGNHDAVVRAVTGED* |
| Ga0065705_100733613 | 3300005294 | Switchgrass Rhizosphere | MTHKRTGREVYDALREQGQGHPREYKAREVCFDALELRPNETTVANGNHDAVVRAVTGED |
| Ga0065707_102249022 | 3300005295 | Switchgrass Rhizosphere | MPEAEDGMIHKLTGREVYDARREQRQGHSGEYIAGFSTWAGGKVCFDALAPRLNETTVANGNHDAVVRAVTGED* |
| Ga0070690_1005226921 | 3300005330 | Switchgrass Rhizosphere | MPEAEDGMTHKRTGREVYDALREQRQGQPGEYKAGEVCFDALALRLNETTVVNCNHDAVVRAVTGDD* |
| Ga0066388_1019814241 | 3300005332 | Tropical Forest Soil | MPEAEEGMPHQRTGREVSDALREQQGHPGEDKAGEVCFDALALCLKESTVGNGNRDAVVRAITGED* |
| Ga0068869_1009512731 | 3300005334 | Miscanthus Rhizosphere | EAEDGMTHKRTGREVYDAPSEQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAVVRAVTGED* |
| Ga0070688_1009641404 | 3300005365 | Switchgrass Rhizosphere | EDGMTHKRTGREVYDAPSEQGQGHPGQDKAGEVCFDALALRLNESTVDNGNHDAVVRAITGED* |
| Ga0070688_1015148632 | 3300005365 | Switchgrass Rhizosphere | MIHKLTGREVYDALREQRQGHPGEYIAGFSTWVDGKVCFDALALRLNEIIFANGNRDAVVRAVTRED* |
| Ga0070711_1003013873 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MPEAEDGVTHKLTGREVYDALREQGQGHPGEYIAGFSTSIEGRVCFDALALRLNEIIAANGNHDAVMRAITGEA* |
| Ga0070711_1006122192 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | LHEQRQGHLGECIAGVSTWIDGKVCFDALALRLNEIIVAKQNGLSHGNHDAVVRAITGED |
| Ga0070711_1016714582 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MTHKLTGREVYEALREQGQDHPGEDKTGKVCFDALALRLNESTVDNGNHDAVVRAVTGE |
| Ga0070705_1000837561 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MPEAEDGMIHKLTGREVYDALREQRQGHPGEYIAGFSTWVDGKVCFDALALRLNEIIFANGNRDAVVRAVTRED* |
| Ga0070705_1000942575 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MPEAEDGMTHKRTGREVYDAPSEQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAVVRAITGED* |
| Ga0070707_1002822985 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | GMIHKLTGREVYDALREQRQGHPGEYIAGFSTWVDGKVCFDALALRLNEIIFANGNRDAVVRAVTRED* |
| Ga0073909_100414653 | 3300005526 | Surface Soil | MPEAEDGMTHKLTGREVYDALCELRQGPPGEWIDGKVCFDTLALRLNEIIVSNGNHDAVVRAVTGED* |
| Ga0073909_101379333 | 3300005526 | Surface Soil | MPEAEDGMTHKRTGREVYDALREQGQGHPREYKAREVCFDALALRLNESTVDNGNHDAVVRAVTGED* |
| Ga0070704_1006444873 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | EAEDGMTHKRTGREVYDAPSEQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAIVRAITGED* |
| Ga0066903_1079823951 | 3300005764 | Tropical Forest Soil | MPEAEEVITNKRTGREVSDALREQGQGHKGEDKAGEVCFDALAPRLNKSTVDNGNHDAVVRALTGEN* |
| Ga0070716_1000972242 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MPEAEDGMTHKRTGREVCDALREQRQGHPGEDQAGEVCFGAPLRLNESTVGNGNHDAVVRAITGED* |
| Ga0070716_1001026583 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MTHKLTGREVYDALREHLQVHSGEYTGEYIAGFSTWIHGKVCFDALALRLNKIIGANGNHDAVVRAVTGED* |
| Ga0070716_1012122932 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MTHKLTGREVYDALLEHLQIYSGEYTGEYVAGFGTRIDGKVYFDALALRLNEIIVAKQNGLSHSNHDAVVRAVTGED* |
| Ga0070712_1001229591 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | RGMTHKLTGREVYDALREHLQVHSGEYTGEYIAGFSTWIHGKVCFDALALRLNKIIGANGNHDAVVRAVTGED* |
| Ga0070712_1004424291 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MTHKLTGKEVYDALCVQGQGDMGEYTAGFSSTWIDGKVCFDALALRLNEIIVANGNHDAVVRAITGED* |
| Ga0070712_1014586231 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MTHKRTGREVYDALREQGQGHPREYKAREVCFDALALRLNESTVDNGNHDA |
| Ga0097621_1000165628 | 3300006237 | Miscanthus Rhizosphere | MTHKRTEREVDDALREQGQGHPGEDKSGEVYFDGLALRLKESTVDNGNHNAVVRAITGED |
| Ga0075433_105147842 | 3300006852 | Populus Rhizosphere | MPEAEDGMTHKRTGREVYDAPSEQGQGHPGEDKAGEVCFDARAQRLNESTVDNGNHDAVVRAITGED* |
| Ga0068865_1018896251 | 3300006881 | Miscanthus Rhizosphere | REVYDALREQGQGHPREYKAREVCFDALALRLNETTVVNCNHDAVVRAVTGDD* |
| Ga0099791_105862361 | 3300007255 | Vadose Zone Soil | MTHKLTGREVYDAVREQRQGHSGECTGEYIAGFSTWIDGKVCFDALALRLNEIIVGNGNHDAVVRAVAHHPIRAKHGRRR* |
| Ga0099793_103293971 | 3300007258 | Vadose Zone Soil | MIHKLTGREVYDALREQRQAHSGEGTGEYTGEYIAGFSTWIDGKVCFAALAPRLNEIIVTNGNHDAVVRAVTGED* |
| Ga0105247_116699952 | 3300009101 | Switchgrass Rhizosphere | MTHKLTGREVYDALRERRQGHPGEFVAGFSTWIDGKVYFDALALRLNEIIFANGNRDAVVRAVTRED* |
| Ga0105242_113720542 | 3300009176 | Miscanthus Rhizosphere | MPEAEDGMTHKRTGREVYDALREQGQGHPREYKAREVCFDALALRLNETTVVNCNHDAVVRAVTGDD* |
| Ga0105237_127089631 | 3300009545 | Corn Rhizosphere | MPEAEDGMTHKRTGREVYDAPSEQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAVVRAVTGED* |
| Ga0099796_104755152 | 3300010159 | Vadose Zone Soil | MPHKLTGREVYDALREHLHVHSREYTGKYIAGSITWIHGKVCFDALALRLNEIIVANGNHDAVVRAVTG* |
| Ga0126370_100434023 | 3300010358 | Tropical Forest Soil | MQSKLAGSDVVDALREQRQGHPRDKAGEVCFDALTLRLTESTFDNGNHDAVVRAITGED* |
| Ga0126379_118766772 | 3300010366 | Tropical Forest Soil | MQHKLAGRDVFDALREKAGEVCFDALTLRLTESTVDNGNHDALVRTITGED* |
| Ga0126383_134186892 | 3300010398 | Tropical Forest Soil | MQHKLAGSDVFDALREKAGEVCFDALTLRLTESTVDNGNHDAVVRTITGED* |
| Ga0137399_104380423 | 3300012203 | Vadose Zone Soil | MTHKLTEKEVNDALREQRQGHSGECTGEYIAGFSTWIDGKVCFDALALRLNEIIVANGNHDAVVRAVTGED* |
| Ga0137387_110352392 | 3300012349 | Vadose Zone Soil | MTHKLTGREVYDALREQRQGDSGEYTAGFSTWIEGKVCFDALALRLNEIIVGNGNHDAVVRAVTGED* |
| Ga0137358_109649021 | 3300012582 | Vadose Zone Soil | MTRKLTGREVYDAVREQRQGHSGECTGEYIAGFSTWIDGKVCFDALALRLNEIIVANGNHDAVVRAVTGED* |
| Ga0137394_101654921 | 3300012922 | Vadose Zone Soil | MTHKLTGREVYDALREQRQGDSGEYTGEYIAGFSTWIDGKVCFDALALRLNKIIVGNGNHDAVVRAVTSED* |
| Ga0137413_113621302 | 3300012924 | Vadose Zone Soil | MIHKLTGREVYDALREHLHVHSGEYTGKYIAGFSTWIHGKVCFDALALRLNEIIVANGNHDAVVRAVTGED* |
| Ga0137410_109523491 | 3300012944 | Vadose Zone Soil | MTHKLTGREVYDALREQRQGHSGEYTGEYIAGFSTWIDGKVCFDALALRRNEIIVANGNHDAVVRAVTGED* |
| Ga0164303_102225332 | 3300012957 | Soil | MPEAEDGMTHKRTGREVYDALREQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAVVRAITGED* |
| Ga0164301_111006492 | 3300012960 | Soil | SNPAHSMPGAEDGMTHKLTGRGVYDALREQRQGHPGEYIAGSSTWIDGKVCFDALALRLIAIIAANGNHDAVVRAITGED* |
| Ga0164304_111352661 | 3300012986 | Soil | MPEAEDGMTHKRTGREVYDALREQGQGHPGEDKAGEVCFDGLALRLNKSTVDNGNHDAVVRAITGED* |
| Ga0164306_115285731 | 3300012988 | Soil | RFAGGTSCEESNPAHSLPKAEDGMTHKLTGREVYDALCELRQGPPGEWIDGKVCFDTLALRLNEIIVSNGNHDAVVRAVTGED* |
| Ga0164305_118385841 | 3300012989 | Soil | MPEAEDGMTHKLTGREVYDALREQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAVVRAITGED* |
| Ga0164305_119374261 | 3300012989 | Soil | RFAGATSCEESNPAHSWPEAEDGMTHKLTGREVYDALCELRQGPPGEWIDGKVCFDTLALRLNEIIVSNGNHDAVVRAVTGED* |
| Ga0157375_101825305 | 3300013308 | Miscanthus Rhizosphere | MPEAEDGMTHKRTGREVYDAPSEQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAIVRAITGED* |
| Ga0157375_111531593 | 3300013308 | Miscanthus Rhizosphere | MPEAEDGMTHKRTGREVYDALREQRQGQPEEYKAGEVCFDALALRLNETTVVNCNHDAVVRAVTGDD* |
| Ga0137418_112384142 | 3300015241 | Vadose Zone Soil | VTHKLTGREVYDALREHLHVHSGEYTGKYIAGFSTWIHGKVCFDALALRLNEIIVANGNHDAVVRAVTGED* |
| Ga0137409_104601772 | 3300015245 | Vadose Zone Soil | MTHKLTGREVYDALREHLHVHSGEYTGKYIAGFSTWIHGKVCFDALALRRNEIIVANGNHDAVVRAVTGED* |
| Ga0137403_107661222 | 3300015264 | Vadose Zone Soil | MTHKLTGREVYDAVLEQRQGHSGEYIAGFSTWIDGKVCFDALALRLNEIIVGNGNHDAVVRAVTGED* |
| Ga0132258_111312783 | 3300015371 | Arabidopsis Rhizosphere | MPEAEDGMTHKRTGREVYDALREQRQGQPGEYKAGDVCFDALALRLNETTVVNCNHDAVVRAVTGDD* |
| Ga0132258_111491925 | 3300015371 | Arabidopsis Rhizosphere | MPEAEDGVTHKLTGREVYDALREQGQGHPGEYMAGFSTSIEGRVCFDALALRLNEIIAANGNHDAVMRAITGEA* |
| Ga0132256_1009482751 | 3300015372 | Arabidopsis Rhizosphere | MPEAEPGMTHKRTEREVDDALREQGQGHPGEDKSGEVYFDGLALRRKESTVDNGNHNAVVRAITGED* |
| Ga0132256_1019013942 | 3300015372 | Arabidopsis Rhizosphere | LTFLRLAVRHGVQAEAQMTHKLTGKEVYDALCVQGQGDMGEYTAGFSSTWIDGKVCFDALALRLNEIIFANGNRDAVVRAVTGED* |
| Ga0132255_1060920101 | 3300015374 | Arabidopsis Rhizosphere | GREVYDALREQGQGHPGEYMAGFSTSIEGRVCFDALALRLNEIIAANGNHDAVMRAITGEA* |
| Ga0179590_10857052 | 3300020140 | Vadose Zone Soil | MPHKPTGREVYDALREQRQGHTGEYTAGFSTWIDGKVCFDALALRLNKIVANNNHNAVVRAVTGED |
| Ga0179590_11306971 | 3300020140 | Vadose Zone Soil | MTHKLTGREVYDALREHLHVHSSEYTGKYIAGFSSWIHGKVCFDALALRLNEITVANSNRNAVVRAVTGED |
| Ga0210407_104568832 | 3300020579 | Soil | MTHKLTGREVYDALLEQRQGHSGEYTGEYIAGFSTWIDGKVCFDALARRLNEIIVSNGNHDAVVRAVTGEY |
| Ga0210406_100062912 | 3300021168 | Soil | MTHKLTGREVYDAVCEQRQGHTGEYIAGSSTWIDGKVCFDALALRLNKIIVANCNHDAVVRAVTGED |
| Ga0179589_101154923 | 3300024288 | Vadose Zone Soil | MTHKLTGREVYDAVREQRQGHSGECTGEYIAGFSTWIDGKVCFDALALRRNEIIVANGNHDAVVRAVTGED |
| Ga0179589_105431051 | 3300024288 | Vadose Zone Soil | MPHKLTGREVYDALREQRQGHTGEYTAGFSTWIDGKICFDALALRLNKIVANNNHNAVVRAVTGED |
| Ga0207684_105450033 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MPEAEDGMIHKLTGREVYDALREQRQGHPGEYIAGFSTWVDGKVCFDALALRLNEIIFANGNRDAVVRAVTRED |
| Ga0207684_114631891 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MPEAEDGMTHKRTGREVYDAPSEQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAVVRAITGED |
| Ga0207663_100896271 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | PKAEDGMTHKLTGREVYDALHEERQGHLGECIAGVSTWIDGKVCFDALALRLNEIIVAKQNGLSHGNHDAVVRAITGED |
| Ga0207646_100537893 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MTHKRTGREVYDAPSEQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAIVRAITGED |
| Ga0207646_103745854 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | GMIHKLTGREVYDALREQRQGHPGEYIAGFSTWVDGKVCFDALALRLNEIIFANGNRDAVVRAVTRED |
| Ga0207711_101710404 | 3300025941 | Switchgrass Rhizosphere | MIHKLTGREVYDALREQRQGHPGEYIAGFSTWVDGKVCFDALALRLNEIIFANGNRDAVVRAVTRED |
| Ga0207712_102893002 | 3300025961 | Switchgrass Rhizosphere | MTHKRTGREVYDAPSEQGQGHPGEDKAGEVCFDALALRLNESTVDNGNHDAVVRAITGED |
| Ga0207658_111093402 | 3300025986 | Switchgrass Rhizosphere | MTHKRTGREVYDALREQGQGHPREYKAREVCFDALAPRLNESTVDNGNHDAVVRAVTGED |
| Ga0257147_10577172 | 3300026475 | Soil | MTHKLTGREVYDAVREQRQGHSGECTGEYIAGFSTWIDGKVCFDALALRLNEIIVTNGNHDAVVRAVTGED |
| Ga0257153_10077292 | 3300026490 | Soil | MPHKLTGREVYDALREQRQGHSGEYTGEYIAGFSTWIDGKVCFDALALRLNEIIVTNGNHDAVVRAVTGED |
| Ga0257153_10097473 | 3300026490 | Soil | MTHKLTGREVYDVLREQRQGPSRECTGEYIAGFSTWIEGKVCFDGLARRLNEIIAGNGNHDAVVRAVTGED |
| Ga0209325_10294182 | 3300027050 | Forest Soil | MIHKLTGREVYDALREHLHVHSGEYTGKYIAGSSTWIHGKVCFDALALRLNEIIVANSNRNAVVRAVTGED |
| Ga0209729_10086412 | 3300027061 | Forest Soil | MIHKLTGREVYDALREQRQGHIGEYIAGFSTWIDGKVCFDGLALRLNKIIVANCNHDAVVRAVTGED |
| Ga0209622_10141143 | 3300027502 | Forest Soil | MTHKLTGREVYDAVCEQLQGHTGEYIAGCSTWIDGKVCFDTLALRLNKIIVANCNHDAVVRAVTGED |
| Ga0209811_100248462 | 3300027821 | Surface Soil | MTHKLTGREVYDALCELRQGPPGEWIDGKVCFDTLALRLNEIIVSNGNHDAVVRAVTGED |
| Ga0170834_1127433842 | 3300031057 | Forest Soil | MTHKLTGREVYDVLLGQRQGHSGEYTGEYIAGFSTWIDGRAYFDALALRLNEIIVAKQNGLSHSNHDAVARAVTGED |
| Ga0170823_147957142 | 3300031128 | Forest Soil | VTHKLTGKEVYDALREQRQGDSGEYIAGFSTWIDGKVCFDALALRLNEIIVAKQNGLSHSNHDAVARAVTGED |
| Ga0170824_1268825261 | 3300031231 | Forest Soil | MTHNLTGREVYDAVCEQRQGHTGEYIAGSSTWIDGKVCFDALALRLNKVIVANCNHDAVVRAVTGED |
| Ga0170820_136389182 | 3300031446 | Forest Soil | MTHKLTGREVYDVLLGQRQGHSGEYTGEYIAGFSTWIDGRAYFDALALRLNEIIVAKQNGLSHSNRDAVVRAVTGEH |
| Ga0170818_1065815492 | 3300031474 | Forest Soil | MTHNLTGREVYDAVCEQRQGHTGEYIAGSSTWIDGKVCFDALALRLNEIIGGNGNHDAVVRAATGED |
| Ga0307469_101705183 | 3300031720 | Hardwood Forest Soil | MIHKPTGREVYDVLREQRQGHPGEYIAGFSTWVGGKVCFDALALRLNETTVANGNHDAVVRAVTGED |
| Ga0307469_105835371 | 3300031720 | Hardwood Forest Soil | MTHKLTGREVYDALHEQRQGQAGECIAGVSTWIDGKVCFDALALRLNEIIVAKQNGLSHGNHDAVVRAITGED |
| Ga0307468_1002698251 | 3300031740 | Hardwood Forest Soil | MTHKLTGREVYDALREHLQVHSGEYTGEYIAGFSTWIHGKVCFDALALRLNESTVDNGNHDAVVRAVTGED |
| Ga0307475_111995971 | 3300031754 | Hardwood Forest Soil | MTHKLTGREVYDALREHLQVHSGEYTGKYIAGSSTWIHGKVCFDALALRLNEIIVANSNHNAVVRAVTGED |
| Ga0307473_113142562 | 3300031820 | Hardwood Forest Soil | RTGREVYDALREQRQGQPGEYKAGEVCFDALALRLNETTVVNCNHDAVVRAVTGED |
| Ga0307479_102167452 | 3300031962 | Hardwood Forest Soil | MTHKLTGREVYDALREQRQGHTGEYIAGFSTWIDGKVCFDALALRLNKIIVANCNHDAVVRAVTGED |
| Ga0307470_102567441 | 3300032174 | Hardwood Forest Soil | MTHKLTGKEIYDAVREQRQGHTGEYIAGFSTWIDGKVCFDALALRLNKIIVANGNHDAVVRAVTGED |
| Ga0307470_107176122 | 3300032174 | Hardwood Forest Soil | GMTHKLTGREVYDALREQRQGDSGEYIAGISTSIDGKVCFDTLAVRLNETIVGNGNHDAVVRAVTGEY |
| Ga0307470_109305442 | 3300032174 | Hardwood Forest Soil | MTHKLTGREVYDAVREQRQGHSGEYTGEYIAGFSTWIDGKVCFDALALRLNEIIVANSNRNAVVRAVTTED |
| Ga0307470_118164082 | 3300032174 | Hardwood Forest Soil | MPEAEDRMTHKRTGREVCDALREQRQDHPGEDQAGEVCFGAPLRLNESTVGNGNHDAVVRAITGED |
| Ga0307471_1010527752 | 3300032180 | Hardwood Forest Soil | MTHKLTGREVYDALREHLQVHSGEYTGEYIAGFSTWIHGKVCFDALALRLNKIIGANGNHDSVMRAVTGED |
| Ga0307471_1010710104 | 3300032180 | Hardwood Forest Soil | RGMTHKLTGREVYDALREQLQGHTGEYIAGFSTWIDGKVCLDGLALRLNKIIVANSNHEAVVRAVTGED |
| Ga0307472_1005723431 | 3300032205 | Hardwood Forest Soil | MTHKLTGREVYDALREQRQGDSGEYIAGISTSIDGKVCFDTLAVRLNETIVGNGNHDAVVRAVTGEY |
| Ga0307472_1009144832 | 3300032205 | Hardwood Forest Soil | MTHKLTGREVYDALHEQRRGHLGECIAGVSTWIDGKVCFDALALRLNEIIVAKQNGLSHGNHDAVVRAITGED |
| Ga0307472_1015990623 | 3300032205 | Hardwood Forest Soil | TGREVYDALREHLHVHSGEYTGKYIAGSSTWIHGKVCFDALALRLNEIIVANSNHNAVVRAVTGED |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |