Metagenome Family F090791

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090791
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	60 residues
Representative Sequence	MKLTIELEEPYAKELDLRAYRSGQTVKEYVEESMRTDVEADMSFDEKTALHKELAERN
Number of Associated Samples	63
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.85 %
% of genes near scaffold ends (potentially truncated)	19.44 %
% of genes from short scaffolds (< 2000 bps)	74.07 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.111 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.815 % of family members)
Environment Ontology (ENVO)	Unclassified (43.519 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.111 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.51% β-sheet: 0.00% Coil/Unstructured: 53.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01329	Pterin_4a	4.63
PF14534	DUF4440	2.78
PF01068	DNA_ligase_A_M	2.78
PF12728	HTH_17	1.85
PF00005	ABC_tran	1.85
PF16518	GrlR	1.85
PF13924	Lipocalin_5	1.85
PF01370	Epimerase	0.93
PF02894	GFO_IDH_MocA_C	0.93
PF02464	CinA	0.93
PF07250	Glyoxal_oxid_N	0.93
PF13404	HTH_AsnC-type	0.93
PF00925	GTP_cyclohydro2	0.93
PF14020	DUF4236	0.93
PF13416	SBP_bac_8	0.93
PF00589	Phage_integrase	0.93
PF01471	PG_binding_1	0.93
PF02586	SRAP	0.93
PF05717	TnpB_IS66	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	4.63
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.78
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.78
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.93
COG0807	GTP cyclohydrolase II	Coenzyme transport and metabolism [H]	0.93
COG1546	Nicotinamide mononucleotide (NMN) deamidase PncC	Coenzyme transport and metabolism [H]	0.93
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.93
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
All Organisms	root	All Organisms	38.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
cellular organisms	root	All Organisms → cellular organisms	38.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.63 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.93 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.70 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	0.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.70 %
Nitrospirae bacterium GWA2_42_11	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWA2_42_11	0.93 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.93 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.70 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.93 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.93 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.93 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.93 %
Nitrospirae bacterium GWA2_42_11	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWA2_42_11	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.70 %
Aliidongia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia	0.93 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.93 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.93 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.93 %
Nitrospirae bacterium GWA2_42_11	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWA2_42_11	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.70 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.93 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.93 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.93 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.93 %
Nitrospirae bacterium GWA2_42_11	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWA2_42_11	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.11 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.70 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.93 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.93 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.93 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.93 %
Nitrospirae bacterium GWA2_42_11	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWA2_42_11	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02JMSLX	Not Available	550	Open in IMG/M
2088090014\|GPIPI_17058434	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
2088090014\|GPIPI_17110223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	2128	Open in IMG/M
3300000955\|JGI1027J12803_100347110	Not Available	608	Open in IMG/M
3300000955\|JGI1027J12803_101828048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1281	Open in IMG/M
3300000955\|JGI1027J12803_108222736	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300001545\|JGI12630J15595_10003218	All Organisms → cellular organisms → Bacteria	3560	Open in IMG/M
3300001545\|JGI12630J15595_10014968	Not Available	1662	Open in IMG/M
3300001867\|JGI12627J18819_10063534	Not Available	1537	Open in IMG/M
3300002245\|JGIcombinedJ26739_100000737	All Organisms → cellular organisms → Bacteria	19358	Open in IMG/M
3300002906\|JGI25614J43888_10001122	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	7845	Open in IMG/M
3300002906\|JGI25614J43888_10001864	All Organisms → cellular organisms → Bacteria	6410	Open in IMG/M
3300002906\|JGI25614J43888_10007538	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	3521	Open in IMG/M
3300002906\|JGI25614J43888_10007568	All Organisms → cellular organisms → Bacteria	3515	Open in IMG/M
3300002906\|JGI25614J43888_10103767	Not Available	746	Open in IMG/M
3300002906\|JGI25614J43888_10113149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	707	Open in IMG/M
3300002910\|JGI25615J43890_1018288	Not Available	1153	Open in IMG/M
3300002910\|JGI25615J43890_1025480	Not Available	976	Open in IMG/M
3300002914\|JGI25617J43924_10078407	Not Available	1202	Open in IMG/M
3300005435\|Ga0070714_102284831	Not Available	526	Open in IMG/M
3300005436\|Ga0070713_100582372	Not Available	1062	Open in IMG/M
3300005444\|Ga0070694_101579522	Not Available	556	Open in IMG/M
3300005445\|Ga0070708_100007695	All Organisms → cellular organisms → Bacteria	8634	Open in IMG/M
3300005445\|Ga0070708_100009759	All Organisms → cellular organisms → Bacteria → Acidobacteria	7751	Open in IMG/M
3300005445\|Ga0070708_100019024	All Organisms → cellular organisms → Bacteria → Proteobacteria	5760	Open in IMG/M
3300005467\|Ga0070706_100542844	Not Available	1081	Open in IMG/M
3300005467\|Ga0070706_101690513	Not Available	576	Open in IMG/M
3300005468\|Ga0070707_100043053	All Organisms → cellular organisms → Bacteria	4322	Open in IMG/M
3300005468\|Ga0070707_101773154	Not Available	584	Open in IMG/M
3300005518\|Ga0070699_100001066	All Organisms → cellular organisms → Bacteria	25512	Open in IMG/M
3300005536\|Ga0070697_101795229	Not Available	549	Open in IMG/M
3300006028\|Ga0070717_11881590	Not Available	540	Open in IMG/M
3300006173\|Ga0070716_100542215	Not Available	866	Open in IMG/M
3300006173\|Ga0070716_101692004	Not Available	522	Open in IMG/M
3300006175\|Ga0070712_101924323	Not Available	518	Open in IMG/M
3300007788\|Ga0099795_10061074	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300009143\|Ga0099792_10270458	Not Available	997	Open in IMG/M
3300010159\|Ga0099796_10281386	Not Available	699	Open in IMG/M
3300012199\|Ga0137383_11224973	Not Available	538	Open in IMG/M
3300012200\|Ga0137382_10813032	Not Available	673	Open in IMG/M
3300012202\|Ga0137363_10472220	Not Available	1051	Open in IMG/M
3300012202\|Ga0137363_10563125	Not Available	960	Open in IMG/M
3300012202\|Ga0137363_10689993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300012202\|Ga0137363_11497621	Not Available	566	Open in IMG/M
3300012202\|Ga0137363_11541408	Not Available	556	Open in IMG/M
3300012203\|Ga0137399_10093413	Not Available	2311	Open in IMG/M
3300012203\|Ga0137399_10210590	Not Available	1581	Open in IMG/M
3300012203\|Ga0137399_10914745	Not Available	739	Open in IMG/M
3300012205\|Ga0137362_10196900	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300012205\|Ga0137362_10300902	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium GWA2_42_11	1388	Open in IMG/M
3300012361\|Ga0137360_10185937	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300012361\|Ga0137360_10457666	Not Available	1082	Open in IMG/M
3300012361\|Ga0137360_11323195	Not Available	622	Open in IMG/M
3300012362\|Ga0137361_10022868	All Organisms → cellular organisms → Bacteria → Proteobacteria	4799	Open in IMG/M
3300012362\|Ga0137361_10441966	Not Available	1194	Open in IMG/M
3300012362\|Ga0137361_10771722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300012582\|Ga0137358_10159668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1536	Open in IMG/M
3300012582\|Ga0137358_10427426	Not Available	895	Open in IMG/M
3300012582\|Ga0137358_10591219	Not Available	745	Open in IMG/M
3300012582\|Ga0137358_10708047	Not Available	673	Open in IMG/M
3300012683\|Ga0137398_10631816	Not Available	742	Open in IMG/M
3300012683\|Ga0137398_10820964	Not Available	650	Open in IMG/M
3300012685\|Ga0137397_10168489	Not Available	1625	Open in IMG/M
3300012922\|Ga0137394_11512711	Not Available	530	Open in IMG/M
3300012923\|Ga0137359_10012520	All Organisms → cellular organisms → Bacteria	7106	Open in IMG/M
3300012923\|Ga0137359_10035550	All Organisms → cellular organisms → Bacteria	4294	Open in IMG/M
3300012923\|Ga0137359_10286826	Not Available	1467	Open in IMG/M
3300012927\|Ga0137416_10854125	Not Available	807	Open in IMG/M
3300015241\|Ga0137418_10250234	Not Available	1504	Open in IMG/M
3300015242\|Ga0137412_10513107	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300020140\|Ga0179590_1061292	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300020199\|Ga0179592_10007675	All Organisms → cellular organisms → Bacteria	4625	Open in IMG/M
3300020199\|Ga0179592_10075517	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300020199\|Ga0179592_10143013	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300021432\|Ga0210384_11746438	Not Available	528	Open in IMG/M
3300024288\|Ga0179589_10064373	Not Available	1420	Open in IMG/M
3300025898\|Ga0207692_11145468	Not Available	516	Open in IMG/M
3300025910\|Ga0207684_10314136	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300025910\|Ga0207684_10619116	Not Available	924	Open in IMG/M
3300025910\|Ga0207684_11016362	Not Available	693	Open in IMG/M
3300025916\|Ga0207663_10617523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300025939\|Ga0207665_10513590	Not Available	927	Open in IMG/M
3300025939\|Ga0207665_10898714	Not Available	702	Open in IMG/M
3300026304\|Ga0209240_1004105	All Organisms → cellular organisms → Bacteria	5497	Open in IMG/M
3300026304\|Ga0209240_1010341	All Organisms → cellular organisms → Bacteria	3537	Open in IMG/M
3300026304\|Ga0209240_1013480	Not Available	3114	Open in IMG/M
3300026304\|Ga0209240_1024165	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300026304\|Ga0209240_1187045	Not Available	626	Open in IMG/M
3300026319\|Ga0209647_1005558	All Organisms → cellular organisms → Bacteria → Proteobacteria	9189	Open in IMG/M
3300026351\|Ga0257170_1032027	Not Available	711	Open in IMG/M
3300026356\|Ga0257150_1005660	All Organisms → cellular organisms → Bacteria → Acidobacteria	1661	Open in IMG/M
3300026494\|Ga0257159_1062903	Not Available	635	Open in IMG/M
3300026498\|Ga0257156_1034139	Not Available	1033	Open in IMG/M
3300026508\|Ga0257161_1125578	Not Available	538	Open in IMG/M
3300026557\|Ga0179587_11142738	Not Available	513	Open in IMG/M
3300027050\|Ga0209325_1025413	Not Available	700	Open in IMG/M
3300027050\|Ga0209325_1046926	Not Available	523	Open in IMG/M
3300027521\|Ga0209524_1000529	Not Available	5676	Open in IMG/M
3300027521\|Ga0209524_1001552	All Organisms → cellular organisms → Bacteria	3914	Open in IMG/M
3300027603\|Ga0209331_1012700	Not Available	2196	Open in IMG/M
3300027605\|Ga0209329_1038155	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300027681\|Ga0208991_1089803	Not Available	923	Open in IMG/M
3300027903\|Ga0209488_10626001	Not Available	778	Open in IMG/M
3300028047\|Ga0209526_10001315	All Organisms → cellular organisms → Bacteria	16555	Open in IMG/M
3300028536\|Ga0137415_10115497	Not Available	2531	Open in IMG/M
3300031962\|Ga0307479_10179403	Not Available	2083	Open in IMG/M
3300031962\|Ga0307479_10394226	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1369	Open in IMG/M
3300031962\|Ga0307479_11404711	Not Available	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.59%
Loam	Environmental → Terrestrial → Soil → Loam	32.41%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.33%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	20.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_04333020	2065487018	Soil	MKLAIELEEPYAEELQLRALSSGKTVKEYVEASVKADVEAGMSFDEKTALYKELAEAAACSARSGQTPR
GPIPI_00143870	2088090014	Soil	MKLTIELEEPYAKELELRAYRSDQTVKEYVEESIRADVEADLSFDEKTALHKELAERN
GPIPI_03837030	2088090014	Soil	MKLTIELEEPYAKELELRAYRGGQTLKEYVEQSIRADAEADMSFDEKTALHKELAERNYGYRV
JGI1027J12803_1003471101	3300000955	Soil	MKLTIELEEPYAKELELRAYRSGQGVKEYIEESMRTVVVADMPFDEKTALHKELAERK*
JGI1027J12803_1018280483	3300000955	Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEECMRANAEADMSFDEKISLHKELADRTKQD*
JGI1027J12803_1082227362	3300000955	Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEETMRANAEADMSFDEKITLHKELADRTNRD*
JGI12630J15595_100032187	3300001545	Forest Soil	MKLTIELEEPYAKELELGAYRSGQTVKEYVEETMRANAEADMSFDEKISLHKELADRANRD*
JGI12630J15595_100149681	3300001545	Forest Soil	MKLMIELEEPYAKELELRAYRSGQNLKEYLEESMRADVEADMSFDEKIALHKELAEKN*
JGI12627J18819_100635342	3300001867	Forest Soil	MKLMIELEEPYAKELELLAFRSGQTVKEYVGASVKADVEAGISFDEKTALYKELTERN*
JGIcombinedJ26739_1000007374	3300002245	Forest Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEETMRANAEADMSFDEKISLHKELADRANRD*
JGI25614J43888_100011225	3300002906	Grasslands Soil	MKLTIELEEPYAKELELRAYRGGQTLKEYVEQSIRADAEADMSFDEKTALHKELAERNYGYSVLRILD*
JGI25614J43888_100018644	3300002906	Grasslands Soil	MKLTIELEEPYARELDLRAYRSGQTVKAYVEESMRADVEADISFDEKTALHKELAERN*
JGI25614J43888_100075385	3300002906	Grasslands Soil	MKLTIELEEPYAKELELRAYRSGQTLKEYLEESMRADAEADLSFDEKISLHKGKRHA*
JGI25614J43888_100075682	3300002906	Grasslands Soil	MKLTIELEEPYAKELELRAYRSGQTLKEYVERSIREDAESDMSFDEKTALHKELAERNYGGRVLRILD*
JGI25614J43888_101037672	3300002906	Grasslands Soil	ELELRAFRSGQTVKEYVEASVKADVEADMSFDEKIVLHKELAEAAACSARSEQAPR*
JGI25614J43888_101131491	3300002906	Grasslands Soil	MKLTIELEEPYAEELELRAYRSGQTVKEYVEESIRADAEADMSFDEKAALHKKLAERN*
JGI25615J43890_10182883	3300002910	Grasslands Soil	MKLTIELEEPYAKELELRAYRSGQTLKEYLEESMRADAEADLSFDEKISLHKELADTK*
JGI25615J43890_10254801	3300002910	Grasslands Soil	MKLTIKLEEPYAKELELRAFRSGQTVKEYVEASVKADVEADMSFDEKIVLHKELAEAAACSARSEQAPR*
JGI25617J43924_100784072	3300002914	Grasslands Soil	MKLTIKLEEPYAKELELRAFRSGQTVKEYVEASVKADVEADMSFDEKIVLHKELAEAAPCSARSEQAPR*
Ga0070714_1022848311	3300005435	Agricultural Soil	MKLMIELEEPYAKELELLAFRSGQTVKEYVEASVKGDVEAGMSFDEKTALYKELTERN*
Ga0070713_1005823721	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKLMIELEEPYAKELELLAFRSGQTVKEYVEASVKADVEAGMSFDEKTALYKELTERN*
Ga0070694_1015795222	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKLMIELEEPYAKELELRAYRSGQNLKEYLEESMRADVEADMSFDEKTALHKELAERN*
Ga0070708_10000769510	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKLTIELEEPYAQDLELRAYRSGQTLKEYLEESIRADVEAGMSFDEKIALHKELAERS*
Ga0070708_1000097591	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKLMIELEEPYAKELELRAYRSGQNLKEYLEESMRADVEADMSFDEKT
Ga0070708_1000190241	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKLTIELEEPYAEELELLAFRSGQTVKEYVEASVKADVEAGMSFDEKTALYRELTERN*
Ga0070706_1005428441	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKLMIELEEPYAKELELLAFRSGQTVKEYVEASVKADVEAGMSFDEKTALY
Ga0070706_1016905131	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKLTIELEEPYAEELELLAFRSGQTVKEYVEASVKADVEAGMSFDEKTALYR
Ga0070707_1000430537	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKLTIELEEPYAEELELLAFRSGQTVKEYVEASVKADVEAGMSFDEKTAL
Ga0070707_1017731542	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MIELEEPYAKELELLAFRSGQTVKEYVEASVKADVEAGMSFDEKTALY
Ga0070699_1000010662	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKLTIELEEPYAEELELLAFRSGQTVKEYVEASVKADVEAGMSFDEKTALYKELTERN*
Ga0070697_1017952291	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKLTIELEEPYAKELDLRAYRSGQTVKEYVEESMRTDVEADMSFDEKTALHKELAERN*
Ga0070717_118815901	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKLAIELEEPYAEELELRAFSSGKTVKEYVEASVKADVEAGMSFDEKTALYKELAEAAACSARSGQTPR*
Ga0070716_1005422151	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	EPYAKELELRAYRSGQTVKECVEESMRTVVVADMSFDEKTVLHKELAERN*
Ga0070716_1016920041	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKLMIELEEPYAKELELLAFRSGQTVKEYVEASVKGDVEAGMSFDEKTALYKEL
Ga0070712_1019243231	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KLTIELEEPYAKELELRAYRSDQTVKEYVEESMRTVVVADMSFDEKTALHKELAERN*
Ga0099795_100610743	3300007788	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEETMRANAEADMSFDEKISLHKELADRTNRN*
Ga0099792_102704581	3300009143	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRNGQTVKEYVEETMRANAEADMSFDEKISLHKELADRTNRN*
Ga0099796_102813862	3300010159	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQSVKEYVEESMRTVVVADMPFDEKTALHRELAERK*
Ga0137383_112249732	3300012199	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEETMRANAEADMSFDEKISLHKELADRTNRD*
Ga0137382_108130322	3300012200	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEETMRANAEADMSFDEKISLHKELADRT
Ga0137363_104722201	3300012202	Vadose Zone Soil	MKLTIELEEPYAQDLELRAYRSGQTLKEYLEESIRADVEAGMSFDEKTALHKELAERN*
Ga0137363_105631251	3300012202	Vadose Zone Soil	MVTKYANPSISDPPMKLTIELEEPYVKELELRTFGSGKTVKEYVEESMRKDVEADMSFDEKTVLHKELAERS*
Ga0137363_106899932	3300012202	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQTLKEYVERSIREDAESDMSFDEKTALHKELAERNYGDRVLRILD*
Ga0137363_114976211	3300012202	Vadose Zone Soil	MKLAIELEEPCAEELELRAFSSGKTVKEYVEASVKADVEAGMSFDEKTALYKELAEAAACSARSGQTPR*
Ga0137363_115414082	3300012202	Vadose Zone Soil	MKLTIELEEPYAQDLELRAYRSGQTLKEYLEESIRADVEAGMSFDEKIALHKELAERN*
Ga0137399_100934131	3300012203	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQNLKEYLEESMKANVEADMSFDERIALHKELADRK*
Ga0137399_102105903	3300012203	Vadose Zone Soil	MKLTIELEEQYAKELELRAYRSGQTVKEYVEESMRTDVEADMSFDEKTALHKELAERN*
Ga0137399_109147452	3300012203	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQSVKEYIEESMRTVVVADMPFDEKTALHKELAERK*
Ga0137362_101969003	3300012205	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEESMRADAEADMSFDEKAALHKELADRS*
Ga0137362_103009023	3300012205	Vadose Zone Soil	IELEEPYAKELELRAYRSGQNLKEYLEESMRADVEADMSFDEKIALHKELAEKN*
Ga0137360_101859372	3300012361	Vadose Zone Soil	MKLTIELEEPYVKELELRTFGSGKTVKEYVEESMRKDVEADMSFDEKTVLHKELAERS*
Ga0137360_104576661	3300012361	Vadose Zone Soil	MKLTIELEEPYAKELELLAFRSGQTVKEYVETSVKADVEAGMSFDEKTALYRELTERN*
Ga0137360_113231951	3300012361	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEESMSADAEADMSFDEKAALHKELADRS*
Ga0137361_100228683	3300012362	Vadose Zone Soil	MIELEEPYAKELELRAYRSGQNLKEYLEESMRADVEADMSFDEKIALHKELAEKN*
Ga0137361_104419661	3300012362	Vadose Zone Soil	MKLTIELEEPYAQDLELRAYRSGQTLKESLEESIRADVEAGMSFDEKTALHKELAERN*
Ga0137361_107717222	3300012362	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRGGQTLKEYVEQSIRADAEADMSFDEKTALHKELAERNHGD*
Ga0137358_101596682	3300012582	Vadose Zone Soil	MKLTIELEEPYAKELDLRAYRSGQTVKEYVEESMRTVVVADMSFDEKTALHKELAERN*
Ga0137358_104274263	3300012582	Vadose Zone Soil	MKLTIELKEPYAKELELRAFRSGQTVKEYVEESVRTDVEAEMSFDEKTALHNELAEAAACSARSGQTPR*
Ga0137358_105912191	3300012582	Vadose Zone Soil	MKLTIELEEPYAKELELRAYKSGQTVKEYIEESIRADVEADLSFDEKTALHKELAERN*
Ga0137358_107080471	3300012582	Vadose Zone Soil	MKLAIELEEPYAEELELRAFSSGKTVKEYVEASVKSDVEAGMSFDEKTALYKELAEAAACSARSGQTPR*
Ga0137398_106318162	3300012683	Vadose Zone Soil	MIELKEPYAKELELRAFRSGQTVKEYVEASVKADVEADMSFDEKTALHKELAERN*
Ga0137398_108209641	3300012683	Vadose Zone Soil	IELEEQYAKELELRAYRSGQTVKEYVEESMRTDVEADMSFDEKTALHKELAERN*
Ga0137397_101684894	3300012685	Vadose Zone Soil	MKLAIELEEPYAEELELRAFSSGKTVKEYVEASVKADVEAGMSFDERTALYKELAEAAACSARSGQTPR*
Ga0137394_115127111	3300012922	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEESMRANAEADMSFDEKITLHKELAD
Ga0137359_100125201	3300012923	Vadose Zone Soil	EEPYAEELELRAFGSGKTVKEYVEASVKAEVEAGMSFDEKTALHKELAERN*
Ga0137359_100355504	3300012923	Vadose Zone Soil	MKLTIELEEPYVKELELRAFGSGKTVKEYVEESMRKDVEAEMSFDEKTVLHKELADRS*
Ga0137359_102868262	3300012923	Vadose Zone Soil	MKLTIELEEPYARELDLRAYRSGQTVKEYVEESMRTDVEADMSFDEKTALHKELAERN*
Ga0137416_108541251	3300012927	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQNLKEYLEESMRADVEADMSFDEKIALHKELAEKN*
Ga0137418_102502342	3300015241	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRGGQTLKEYVEQSIRADAEADMSFDEKTALHKELAERTNRD*
Ga0137412_105131072	3300015242	Vadose Zone Soil	EPYAEELELRAFSSGKTVKEYVEASVKADVEAGMSFDERTALYKELAEAAACSARSGQTPR*
Ga0179590_10612922	3300020140	Vadose Zone Soil	MKLTIELEEPYVKELELRTFGSSKTVKEYVEESMRKDVEADMSFDEKTVLHKELAERS
Ga0179592_100076759	3300020199	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQTLKEYVERSIREDAESDMSFDEKTALHKELAERNYGDRVLRILD
Ga0179592_100755172	3300020199	Vadose Zone Soil	MKLTIELEEPYVKELELRTFGSGKTVKEYVEESMRKDVEADMSFDEKTVLHKELAERS
Ga0179592_101430132	3300020199	Vadose Zone Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEETMRANAEADMSFDEKISLHKELADRTNR
Ga0210384_117464382	3300021432	Soil	MKLTIELEEPYAKELELRAFGSGKTVKEYVEESMRKDVEADMSFDEKTALHKELAERS
Ga0179589_100643731	3300024288	Vadose Zone Soil	MKLAIELEEPYAEELELRAFSSGKTVKEYVEASVKADVEAGMSFDERTALYKELAEAAACSARSGQTPR
Ga0207692_111454682	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKLAIELEEPYAEELELRAFSSGKTVKEYVEASVKADVEAGMSFDEKTALHKELAERNYGYRV
Ga0207684_103141361	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLTIELEEPYAQDLELRAYRSGQTLKEYLEESIRADVEAGMSFDEKIALHKELAERS
Ga0207684_106191162	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLMIELEEPYAKELELRAYRSGQNLKEYLEESMRADVEADMSFDEKTALHKELAERN
Ga0207684_110163621	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKLMIELEEPYAKELELLAFRSGQTVKEYVEASVKADVEAGMSFDEKTALYKELTERN
Ga0207663_106175232	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKLAIELEEPYAKELELRAFSSGKTVKEYVEASVKADVEAGMSFDEKTALHKELAESK
Ga0207665_105135902	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RTKDVDPSISDPPMKLTIELEEPYAKELELRAFGSGKTVKEYVEESMRTNVVADMSFDEKTALHKELAERN
Ga0207665_108987142	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKLMIELEEPYAKELELLAFRSGQTVKEYVEASVKGDVEAGMSFDEKTALYKELTERKLTGY
Ga0209240_10041056	3300026304	Grasslands Soil	MKLTIELEEPYAKELELRAYRSGQTLKEYLEESMRADAEADLSFDEKISLHKELADTK
Ga0209240_10103416	3300026304	Grasslands Soil	MKLTIELEEPYAEELELRAYRSGQTVKEYVEESIRADAEADMSFDEKAALHKKLAERN
Ga0209240_10134804	3300026304	Grasslands Soil	MKLTIKLEEPYAKELELRAFRSGQTVKEYVEASVKADVEADMSFDEKIVLHKELAEAAACSARSEQAPR
Ga0209240_10241652	3300026304	Grasslands Soil	MKLTIELEEPYAKELELRAFTCGKTVKQYVEESMRKEVEADMSFDEKTVLHKELADRS
Ga0209240_11870452	3300026304	Grasslands Soil	MKLTIELEEPYAKELELRAYRGGQTLKEYVEQSIRADAEADMSFDEKTALHKELAERNYGYSVLRILD
Ga0209647_10055583	3300026319	Grasslands Soil	MKLTIELEEPYARELDLRAYRSGQTVKAYVEESMRADVEADISFDEKTALHKELAERN
Ga0257170_10320272	3300026351	Soil	MKLTIELEEPYAKELELRAYGSGQTLKEYVERSIREDAESDMSFDEKTALHKELAERNYGDRVLRILD
Ga0257150_10056602	3300026356	Soil	MKLTIELEEPYAQDLELRAYRSGQTLKEYLEESIRADVEAGMSFDEKTALHKELAERN
Ga0257159_10629032	3300026494	Soil	MKLTIELEEPYAKELELRAYRSGQTLKEYVERSIREDAESDMSFDEKTAL
Ga0257156_10341392	3300026498	Soil	DSDLCTMKLTIELEEPYAQDLELRAYRSGQTLKEYLEESIRADVEAGMSFDEKTALHKELAERN
Ga0257161_11255781	3300026508	Soil	MKLTIELEEPYARELDLRAYRSGQTVKEYVEESMRADVEADMSFDEKTALHKELAERN
Ga0179587_111427381	3300026557	Vadose Zone Soil	MKLTIELEEQYAKELELRAYRSGQTVKEYVEESMRTDAEADMSFDEKTALHKELAERN
Ga0209325_10254132	3300027050	Forest Soil	MKLMIELEEPYAKELELLAFRSGQTVKEYVGASVKADVEAGISFDEKTALYKELTERN
Ga0209325_10469262	3300027050	Forest Soil	VRTKDVDPSISDPPMKLTIELEEPYAKELELRAFGSGKTVKEYIEESMRKDVEAEMSFDEKTVLHKELADRS
Ga0209524_10005292	3300027521	Forest Soil	MKLMIELEEPYAKELELRAYRSGQNLKEYLEESMRADVEADMSFDEKIALHKELAEKN
Ga0209524_10015523	3300027521	Forest Soil	MKLTIELEEPYAKELELRAYRSGQTVKEYVEETMRANAEADMSFDEKISLHKELADRANR
Ga0209331_10127002	3300027603	Forest Soil	MKLAIELEEPYAEELELRAFSSGKTVKEYVEASAKADVEAGMSFDEKTALYKELAEAAACSARSGQTPR
Ga0209329_10381552	3300027605	Forest Soil	MKLTIELEEPYAKELELRAYRSGQNLKEYLEESMRADVEADMSFDEKIALHKELADRANR
Ga0208991_10898032	3300027681	Forest Soil	MKLTIELEEPYAKELELRAYRSGQNLKEYLEESMKANVEADMSFDERIALHKELADRK
Ga0209488_106260011	3300027903	Vadose Zone Soil	MKLTIELEEQYAKELELRAYRSGQTVKEYVEESMRTDVEADMSFDEKTALHKELAERN
Ga0209526_100013159	3300028047	Forest Soil	MKLTIELEEPYAKELELGAYRSGQTVKEYVEETMRANAEADMSFDEKISLHKELADRANR
Ga0137415_101154975	3300028536	Vadose Zone Soil	MKLTIELEEPYAKELELGAYRSGQSVKEYIEESMRTVVVADMPFDEKTALHKELAERK
Ga0307479_101794032	3300031962	Hardwood Forest Soil	MKLTIELEESYAQDLELRAYRSGQTLKEYLEESIRADVEARMSFDEKIALHKELAERS
Ga0307479_103942261	3300031962	Hardwood Forest Soil	MKLTIELEEPYVKELELRAFGSGKTVKKYVEESMRKDVEADMSFDEKTALHKELAERS
Ga0307479_114047112	3300031962	Hardwood Forest Soil	MKLTIELEEPYAKELELRAYRCGQSVKEYVEESMRTVVVGDMSFDEKTALHKELAERK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090791

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences