Metagenome / Metatranscriptome Family F090788

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090788
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	101 residues
Representative Sequence	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRDSRFGC
Number of Associated Samples	77
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	93.52 %
% of genes from short scaffolds (< 2000 bps)	90.74 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.222 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (75.000 % of family members)
Environment Ontology (ENVO)	Unclassified (85.185 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (72.222 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.22% β-sheet: 0.00% Coil/Unstructured: 38.78%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF06568	DUF1127	23.15
PF00034	Cytochrom_C	3.70
PF00668	Condensation	1.85
PF00072	Response_reg	0.93
PF07992	Pyr_redox_2	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	23.15
COG1020	EntF, seryl-AMP synthase component of non-ribosomal peptide synthetase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.22 %
Unclassified	root	N/A	2.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.22 %
Unclassified	root	N/A	2.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.22 %
Unclassified	root	N/A	2.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.19 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.78 %
Unclassified	root	N/A	2.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	80.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.78 %
Unclassified	root	N/A	2.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	80.56 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	2.78 %
Unclassified	root	N/A	2.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	2.78 %
Unclassified	root	N/A	2.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.85 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.78 %
Unclassified	root	N/A	2.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.85 %
Bordetella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2.78 %
Unclassified	root	N/A	2.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.85 %
Bordetella trematum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → Bordetella trematum	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002917\|JGI25616J43925_10349615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	547	Open in IMG/M
3300005363\|Ga0008090_10012504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	573	Open in IMG/M
3300005434\|Ga0070709_11721081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	512	Open in IMG/M
3300005555\|Ga0066692_10742255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	606	Open in IMG/M
3300005713\|Ga0066905_101014759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	732	Open in IMG/M
3300005713\|Ga0066905_101183991	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005764\|Ga0066903_105120800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	694	Open in IMG/M
3300005764\|Ga0066903_105176337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	690	Open in IMG/M
3300006173\|Ga0070716_100602406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	826	Open in IMG/M
3300006173\|Ga0070716_100665486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	791	Open in IMG/M
3300006606\|Ga0074062_12760912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Bordetella → Bordetella trematum	516	Open in IMG/M
3300012202\|Ga0137363_10076701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2477	Open in IMG/M
3300016270\|Ga0182036_10678689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	832	Open in IMG/M
3300016294\|Ga0182041_12229880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	512	Open in IMG/M
3300016319\|Ga0182033_10673323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	904	Open in IMG/M
3300016341\|Ga0182035_10422887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1124	Open in IMG/M
3300016341\|Ga0182035_11080750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	713	Open in IMG/M
3300016404\|Ga0182037_11452775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	607	Open in IMG/M
3300016445\|Ga0182038_10555588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	986	Open in IMG/M
3300021171\|Ga0210405_11282540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	539	Open in IMG/M
3300021178\|Ga0210408_10024582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4786	Open in IMG/M
3300021478\|Ga0210402_10535468	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1087	Open in IMG/M
3300021560\|Ga0126371_12470191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	629	Open in IMG/M
3300031544\|Ga0318534_10191139	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300031545\|Ga0318541_10021567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3090	Open in IMG/M
3300031545\|Ga0318541_10147734	All Organisms → cellular organisms → Bacteria → Proteobacteria	1288	Open in IMG/M
3300031545\|Ga0318541_10280099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	928	Open in IMG/M
3300031546\|Ga0318538_10661830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	566	Open in IMG/M
3300031549\|Ga0318571_10040792	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300031561\|Ga0318528_10255849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	939	Open in IMG/M
3300031564\|Ga0318573_10219849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1009	Open in IMG/M
3300031564\|Ga0318573_10473613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	674	Open in IMG/M
3300031573\|Ga0310915_10082670	All Organisms → cellular organisms → Bacteria → Proteobacteria	2138	Open in IMG/M
3300031573\|Ga0310915_10505421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	858	Open in IMG/M
3300031573\|Ga0310915_10888891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	624	Open in IMG/M
3300031573\|Ga0310915_10951883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	600	Open in IMG/M
3300031640\|Ga0318555_10349879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	800	Open in IMG/M
3300031668\|Ga0318542_10403054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	706	Open in IMG/M
3300031668\|Ga0318542_10437296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300031681\|Ga0318572_10154772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1326	Open in IMG/M
3300031681\|Ga0318572_10245944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1051	Open in IMG/M
3300031719\|Ga0306917_11526673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	513	Open in IMG/M
3300031723\|Ga0318493_10484993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	682	Open in IMG/M
3300031723\|Ga0318493_10734176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	554	Open in IMG/M
3300031724\|Ga0318500_10234439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	886	Open in IMG/M
3300031744\|Ga0306918_10789775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	741	Open in IMG/M
3300031744\|Ga0306918_10968632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	661	Open in IMG/M
3300031747\|Ga0318502_10513236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	718	Open in IMG/M
3300031747\|Ga0318502_10891732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	540	Open in IMG/M
3300031748\|Ga0318492_10333568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	792	Open in IMG/M
3300031748\|Ga0318492_10443508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	685	Open in IMG/M
3300031748\|Ga0318492_10784060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	512	Open in IMG/M
3300031763\|Ga0318537_10246793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	662	Open in IMG/M
3300031763\|Ga0318537_10301995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	592	Open in IMG/M
3300031765\|Ga0318554_10308330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	900	Open in IMG/M
3300031765\|Ga0318554_10777781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	536	Open in IMG/M
3300031771\|Ga0318546_10251053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1217	Open in IMG/M
3300031777\|Ga0318543_10426512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	594	Open in IMG/M
3300031778\|Ga0318498_10092623	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300031778\|Ga0318498_10155602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1040	Open in IMG/M
3300031779\|Ga0318566_10293030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	805	Open in IMG/M
3300031780\|Ga0318508_1167775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300031781\|Ga0318547_10202226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1186	Open in IMG/M
3300031792\|Ga0318529_10040225	All Organisms → cellular organisms → Bacteria	1979	Open in IMG/M
3300031793\|Ga0318548_10189656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1007	Open in IMG/M
3300031794\|Ga0318503_10307927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	514	Open in IMG/M
3300031797\|Ga0318550_10092674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1416	Open in IMG/M
3300031798\|Ga0318523_10281444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	830	Open in IMG/M
3300031799\|Ga0318565_10125672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1239	Open in IMG/M
3300031805\|Ga0318497_10048289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2187	Open in IMG/M
3300031819\|Ga0318568_10187292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1274	Open in IMG/M
3300031833\|Ga0310917_10287523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1110	Open in IMG/M
3300031833\|Ga0310917_10469268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	856	Open in IMG/M
3300031835\|Ga0318517_10408182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	613	Open in IMG/M
3300031835\|Ga0318517_10572981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300031859\|Ga0318527_10272927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	719	Open in IMG/M
3300031894\|Ga0318522_10052465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1443	Open in IMG/M
3300031894\|Ga0318522_10335735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	572	Open in IMG/M
3300031897\|Ga0318520_10049115	All Organisms → cellular organisms → Bacteria	2209	Open in IMG/M
3300031897\|Ga0318520_10123596	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300031897\|Ga0318520_10690101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	637	Open in IMG/M
3300031912\|Ga0306921_10770947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1100	Open in IMG/M
3300031941\|Ga0310912_10847996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	704	Open in IMG/M
3300031941\|Ga0310912_10913184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	675	Open in IMG/M
3300031941\|Ga0310912_11056522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	621	Open in IMG/M
3300031942\|Ga0310916_10379850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1201	Open in IMG/M
3300031945\|Ga0310913_10060595	All Organisms → cellular organisms → Bacteria	2492	Open in IMG/M
3300031945\|Ga0310913_10620170	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300031947\|Ga0310909_10172297	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300031947\|Ga0310909_10317996	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300031954\|Ga0306926_12995786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300032001\|Ga0306922_10633526	Not Available	1130	Open in IMG/M
3300032035\|Ga0310911_10212425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1102	Open in IMG/M
3300032042\|Ga0318545_10306997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	570	Open in IMG/M
3300032051\|Ga0318532_10038658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1614	Open in IMG/M
3300032051\|Ga0318532_10122867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	919	Open in IMG/M
3300032052\|Ga0318506_10399513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	609	Open in IMG/M
3300032060\|Ga0318505_10109918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1254	Open in IMG/M
3300032063\|Ga0318504_10358878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	692	Open in IMG/M
3300032064\|Ga0318510_10514593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300032065\|Ga0318513_10010607	All Organisms → cellular organisms → Bacteria → Proteobacteria	3585	Open in IMG/M
3300032065\|Ga0318513_10459574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	622	Open in IMG/M
3300032066\|Ga0318514_10102465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1453	Open in IMG/M
3300032090\|Ga0318518_10104617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1415	Open in IMG/M
3300032261\|Ga0306920_101875686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	843	Open in IMG/M
3300033289\|Ga0310914_11474789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.52%
Loam	Environmental → Terrestrial → Soil → Loam	6.48%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	87.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	75.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25616J43925_103496151	3300002917	Grasslands Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSPREMGVVAEAAGVRNLAERLACRQRRAAMQKARGVIQTQRVNEFAAGR
Ga0008090_100125042	3300005363	Tropical Rainforest Soil	VCPWRPFACTGAHCFSCGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLQVTQRDS
Ga0070709_117210811	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VCPRRPSTRTGAHCFSFGATAWRVAELMAKSPREMGVVAKAAGVRDLAETLACLKRRAAMQKARGVIQTKRVNEFAAGRATRREQLLQVTQRDS
Ga0066692_107422551	3300005555	Soil	MSLTATAWRVAEPMAKSAREMGVIAKATVEGDLAQRLACSQRRPAIQEVRGVIQTKRVYEFATGRTARRKELLEVTQRDPRFGCDLARAEIRI
Ga0066905_1010147592	3300005713	Tropical Forest Soil	VCLWRPFARTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAAGVRDIAERLACLQRRAAMQKARGVIQTKRVNEFAAGRATRREQLLQVTQRDSRFGCDFA
Ga0066905_1011839911	3300005713	Tropical Forest Soil	VCPWRPFARTGAHCFSFGATAWGVAKPMAKSPREMGVVAKAAGVRDLAERLACLQRYAAMQKARSVIQTKRVNEFVAGRATRREQLLQVTQRDSRFGCDFARAEIRI
Ga0066903_1051208003	3300005764	Tropical Forest Soil	VCPWRPFALTGAHCYSFGATAWRVAEPMAKSPREMGVVAKAAGVRDLAERLACLQRRAAMQKARGVIQTKRVNEFAAGRATRR
Ga0066903_1051763372	3300005764	Tropical Forest Soil	VCPWRPFARTGAHYFSFGATAWRVAKSMAESPREMGVVAKAAGVRDLRERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLL
Ga0070716_1006024061	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VCLRRPSARTGAHCFSFGATAWRVAEPMAKSPREMGVVTKAAGVRDIAERLVCLQRGAAMQKARGVIQTKRVNEFAAGRATR
Ga0070716_1006654861	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSLAATAWRVAEPMAKFAREMGVIAKARREGNLAKRLACSQRRAAMQKVRGVIQTKRVYEFATGRTARHKELLEVTQRDSRFGCDLTRAEIRVGEDLIGPAIRSGRIAHFTDLMWAR
Ga0074062_127609121	3300006606	Soil	VCPWRPFARTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAAGIRDLAERLACLQRRASMQKARGVIQTKRVNEFAAGRAARREQLLEIPQRDSRFRCDLARAEVRIGK
Ga0137363_100767014	3300012202	Vadose Zone Soil	VCPGRPFARTGAHCFSFGATARRVAEPMAKSPREMGVVAKAARVRDLAERLACLKRRAAMQKARGVIQTKRVNEFAAGRATRREQLLEIPQRDS
Ga0182036_106786891	3300016270	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRDSRFGC
Ga0182041_122298802	3300016294	Soil	VCPWRPFARTSAHCFSFGAATWRVAKPMAKSPREMGVVAKAAGVPDLAERLACIQRRAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRDSRF
Ga0182033_106733231	3300016319	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQ
Ga0182035_104228871	3300016341	Soil	VCPWRPFARTGAHYFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRRAAMKKARGVIQAKRVNEFAAGRAARGKELLKVTQRDPRFDCDLARAEIRIGKTVLDHAADTRKQLVRMTRNG
Ga0182035_110807502	3300016341	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQ
Ga0182037_114527752	3300016404	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRKQPVRMT
Ga0182038_105555881	3300016445	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRD
Ga0210405_112825401	3300021171	Soil	VCPWRPFARTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAARVRDLAERLACLQRRAAMQKVRGVIQTKQVNEFAAGRATRREQLLNLARL
Ga0210408_100245821	3300021178	Soil	MSLAATAWRVAEPMAKFAREMGVIAKATGEGDLAQRLACSQRRPAMQQLRGVIQTKRVDEFAAGRSARREELLEVTQLDSHFGRDLARAEIRIGEAVLDGTPDTRKQPVRVA
Ga0210402_105354682	3300021478	Soil	VCPWRPFARTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAAGVCDLAETLACLKRRAAMQKARRVIQTKRVNEFAAGRATRREQLLKVTQRDSGFGCDFARPEIRIGKT
Ga0126371_124701912	3300021560	Tropical Forest Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVT
Ga0318534_101911391	3300031544	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAA
Ga0318541_100215671	3300031545	Soil	VCPWRPFARTGAHYFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFVAGRATRREQLLQVTQRDSRFGCDFARAEIRIGKAALDDVADT
Ga0318541_101477341	3300031545	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVNEFAAGRATRREQFLYVTQRDSR
Ga0318541_102800993	3300031545	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSRFGCG
Ga0318538_106618301	3300031546	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRKQPVRM
Ga0318571_100407921	3300031549	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDS
Ga0318528_102558493	3300031561	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIR
Ga0318573_102198491	3300031564	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRD
Ga0318573_104736131	3300031564	Soil	VCPWRPFARTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAAGVRDLAETLACLQRRAAMQKARSVIQTKRVNEFAAGRATRREQLLQV
Ga0310915_100826701	3300031573	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGKAV
Ga0310915_105054211	3300031573	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGKAV
Ga0310915_108888911	3300031573	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRKQPVRMTR
Ga0310915_109518832	3300031573	Soil	VCPWRPFARTGAHCFSFGATAWRVAEPMAKSPRKMGVVAKAAGVRDLAERLACLQRRAAMQKARGLIQTKRVNEFAASRATRREQLLQVTQGDSRFGCDFARAE
Ga0318555_103498793	3300031640	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAV
Ga0318542_104030542	3300031668	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRKQPV
Ga0318542_104372962	3300031668	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLL
Ga0318572_101547723	3300031681	Soil	VCPWRPFARTGAHYFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFVAGRATRREQLLQVTQRDSRFGCDFARAEIRIGKAALDD
Ga0318572_102459441	3300031681	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQR
Ga0306917_115266731	3300031719	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRKQPVRMTR
Ga0318493_104849932	3300031723	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVT
Ga0318493_107341762	3300031723	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVNEFAAGRATRREQFLYVTQRDS
Ga0318500_102344393	3300031724	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAVLDDVADP
Ga0306918_107897751	3300031744	Soil	VCPWRPFARTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAAGVRDLGERLGCLQRHAAMQKARSVIQTKRVNEF
Ga0306918_109686322	3300031744	Soil	VCPWRPFARTGAHCFPFGANAWRVAKPMAKSPREMGVVAKAACVRDLGERLACLQRHAAMQKARSVIQTKRVNEFVAGRATCCEQLLQVTQRDSRFGCDFA
Ga0318502_105132363	3300031747	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAALD
Ga0318502_108917321	3300031747	Soil	VCPWRPFARTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAAGVRDLAETLACLQRRAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQR
Ga0318492_103335682	3300031748	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRK
Ga0318492_104435082	3300031748	Soil	VCPWRPFARTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAAGVRDLAETLACLQRRAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRDSRFGCDFGR
Ga0318492_107840601	3300031748	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAALDDVADTRK
Ga0318537_102467931	3300031763	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSSF
Ga0318537_103019951	3300031763	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEI
Ga0318554_103083301	3300031765	Soil	VCPWRPFARTGAHYFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFVAGRATCCEQLLQVTQRDSRFGCDFARAEILIRKAALDDVADTRKQSL
Ga0318554_107777812	3300031765	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRLNEFAA
Ga0318546_102510531	3300031771	Soil	VCPWRPFARTGAHYFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRRAAMKKARGVIQAKRVNEFAAGRAARGKELLKVTQRDPRFDCDLARAEI
Ga0318543_104265122	3300031777	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVNEFAAGRATRREQFLYVTQRDSRFGCGLAR
Ga0318498_100926233	3300031778	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVNEFAAGRATRREQFL
Ga0318498_101556023	3300031778	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRKQPVRMTR
Ga0318566_102930303	3300031779	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVNEFAAGRATRRE
Ga0318508_11677751	3300031780	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRRE
Ga0318547_102022261	3300031781	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKARSVIQTKRVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRKQPVRMTR
Ga0318529_100402251	3300031792	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQFLYVTQRDSRF
Ga0318548_101896561	3300031793	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRKQPV
Ga0318503_103079272	3300031794	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRRE
Ga0318576_101175744	3300031796	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERV
Ga0318550_100926744	3300031797	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRDSRFG
Ga0318523_102814443	3300031798	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRDSR
Ga0318565_101256724	3300031799	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSSFG
Ga0318497_100482894	3300031805	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRLNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRKQPVRMTRNG
Ga0318568_101872921	3300031819	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRGAAMQKARGVIQTERVNEFAAGRATRREQFLYVTQRDS
Ga0310917_102875234	3300031833	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQGDS
Ga0310917_104692682	3300031833	Soil	VCPWRPFARTGAHCFPFGANAWRVAKPMAKSPREMGVVAKAACVRDLGERLACLQRHAAMQKARSVIQTKRVNEFVAGRATCCEQLLQVTQRDSRFGCDFARAEI
Ga0318517_104081821	3300031835	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGKA
Ga0318517_105729811	3300031835	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIWIGKAVLDDVADPR
Ga0318527_102729272	3300031859	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAVLDD
Ga0318536_101422861	3300031893	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVN
Ga0318522_100524651	3300031894	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSSFGCGLARA
Ga0318522_103357351	3300031894	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRF
Ga0318520_100491151	3300031897	Soil	VCPWRPFARTGAHYFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFVAGRATRREQLLQVTQRDSRFGCDFARAEIRIGK
Ga0318520_101235961	3300031897	Soil	VCPWRPFARTGAHCCSFGATAWRVAEPMAKSPRKMGVVAKAASVRDLAERLVCLQRRAAMHKARGVIQTKRVNELAAGRATRREQ
Ga0318520_106901011	3300031897	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAALDDVAD
Ga0306921_107709471	3300031912	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRDSSF
Ga0310912_108479962	3300031941	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRDSRFGCDFARAEIRIGKA
Ga0310912_109131841	3300031941	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRRAAMKKARGVIQAKRVNEFAAGRAARGKELLKVTQRDPRFDCDLARAEIRIGKTVLDHAADTRKQLVRMTRNG
Ga0310912_110565221	3300031941	Soil	VCPWRPFARTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAAGVRDLAETLACLQRRAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRDSRFGCDFARAEIRIGKTVL
Ga0310916_103798501	3300031942	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQVTQRDSRFGCDFARAEIRIGKAALDDVADT
Ga0310913_100605955	3300031945	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSRFGCGLAR
Ga0310913_106201702	3300031945	Soil	VCPWRPFARTGAHCFPFGANAWRVAKPMAKSPREMGVVAKAACVRDLGERLSCLQRHAAMQKARSVIQTKRVNEFVAGRAARCEQLLLVA
Ga0310909_101722971	3300031947	Soil	VCPWRPFARTGAHYFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRAT
Ga0310909_103179961	3300031947	Soil	VCPWRPFARTGAHCFPFGANAWRVAKPMAKSPREMGVVAKAACVRDLGERLACLQRHAAMQKARSVIQTKRVNEFVAGRATCCEQLLQVTQRDSRFG
Ga0306926_129957861	3300031954	Soil	VCLGRPFAPTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAARVGDLAERLACLQRRAAMQKARGLIQTKRVNEFVAGRATRCEQLLQV
Ga0306922_106335262	3300032001	Soil	VCPWRPFARTSAHCFSFGAATWRVAKPMAKSPREMGVVAKAAGVPDLAERLACTQRRAAMQKARGVIQTKRVNEFAAGRATRREQL
Ga0310911_102124254	3300032035	Soil	VCPWRPFARTGAHCFPFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFAAGRATRREQLLQV
Ga0318545_103069972	3300032042	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARA
Ga0318532_100386581	3300032051	Soil	VCPWRPFARTGAHYFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFVAGRATRREQLLQVTQRDSRFGCDFARAEIRIGKAALDDVAD
Ga0318532_101228671	3300032051	Soil	VCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGK
Ga0318506_103995131	3300032052	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAVLD
Ga0318505_101099181	3300032060	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFL
Ga0318504_103588781	3300032063	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLQVTQRDARF
Ga0318510_105145932	3300032064	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQR
Ga0318513_100106071	3300032065	Soil	MRLDDLDRSCGQDLNYRRPDVVCPWRPFARTGAHCFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLAGLQRGAAMQKARGVIQTERVNEFAAGRATRREQFLYVTQRDS
Ga0318513_104595742	3300032065	Soil	VCPWRPFARTGAHCFSSGATAWRVAEAMAKSSREMGVVAEAAGVRDLAERLACLQRGAAMQKARGVIQTKRVNEFAAGRATRREQLLYVTQRDSRFGCGLARAEIRIGKAVLDDVADPRK
Ga0318514_101024654	3300032066	Soil	VCRWRPFARTGAHCFSFGATAWRVAEPMTKSPREMGVVAKPAGVRDLGERLACLQRGAAMQKVRGVIQTKRVNEFAAGRATRREQFLYVTQRDSRFGCGLARAEIRIGKAVLD
Ga0318518_101046172	3300032090	Soil	VCPWRPFARTGAHYFSFGATAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFVAGRATRREQLLQVTQRDSRFGCDFARAENPDR
Ga0306920_1018756861	3300032261	Soil	VCPWGPFARTGAYCFSFGVTAWRVAKPMAKSPREMGVVAKAAGVRDLGERLACLQRHAAMQKARSVIQTKRVNEFVAGRATRCEQLLQVTQRDSRFGCDFARAE
Ga0310914_114747892	3300033289	Soil	VCLWRPFARTGAHCFSFGATAWRVAEPMAKSPREMGVVAKAAGVRDLAETLACLQRRAAMQKARSVIQTKRVNEFAAGRATRREQLLQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090788

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences