Metagenome Family F090738

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090738
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	70 residues
Representative Sequence	MKNCPECESLSQVFESKLTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI
Number of Associated Samples	94
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	25.93 %
% of genes from short scaffolds (< 2000 bps)	62.96 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.444 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (15.741 % of family members)
Environment Ontology (ENVO)	Unclassified (37.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.778 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.51% β-sheet: 0.00% Coil/Unstructured: 41.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF11154	DUF2934	49.07
PF00171	Aldedh	12.04
PF13545	HTH_Crp_2	9.26
PF00465	Fe-ADH	3.70
PF13442	Cytochrome_CBB3	2.78
PF04366	Ysc84	1.85
PF02771	Acyl-CoA_dh_N	0.93
PF00072	Response_reg	0.93
PF02566	OsmC	0.93
PF07879	PHB_acc_N	0.93
PF14863	Alkyl_sulf_dimr	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	12.04
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	12.04
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	12.04
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	3.70
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	3.70
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	3.70
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	3.70
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	1.85
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.93
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.93
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.93
COG5394	Polyhydroxyalkanoate (PHA) synthesis regulator protein, binds DNA and PHA	Signal transduction mechanisms [T]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.44 %
Unclassified	root	N/A	5.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.44 %
Unclassified	root	N/A	5.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.44 %
Unclassified	root	N/A	5.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	70.37 %
Unclassified	root	N/A	5.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	54.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.19 %
Unclassified	root	N/A	5.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.63 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.19 %
Unclassified	root	N/A	5.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.19 %
Unclassified	root	N/A	5.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.63 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7.41 %
Unclassified	root	N/A	5.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.63 %
Unclassified	root	N/A	5.56 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11632734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1670	Open in IMG/M
3300001867\|JGI12627J18819_10339835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300002557\|JGI25381J37097_1010925	Not Available	1604	Open in IMG/M
3300004157\|Ga0062590_102196092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300005184\|Ga0066671_10208931	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300005290\|Ga0065712_10611167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300005293\|Ga0065715_10015193	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300005334\|Ga0068869_100029778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3828	Open in IMG/M
3300005338\|Ga0068868_101315974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300005339\|Ga0070660_100011053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6401	Open in IMG/M
3300005343\|Ga0070687_100041882	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300005345\|Ga0070692_10091838	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300005356\|Ga0070674_100142477	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1800	Open in IMG/M
3300005365\|Ga0070688_100274747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300005367\|Ga0070667_100059635	All Organisms → cellular organisms → Bacteria	3228	Open in IMG/M
3300005438\|Ga0070701_10488652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300005440\|Ga0070705_100985489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300005441\|Ga0070700_100022803	All Organisms → cellular organisms → Bacteria	3656	Open in IMG/M
3300005451\|Ga0066681_10759001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300005457\|Ga0070662_101961405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300005544\|Ga0070686_100072094	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300005555\|Ga0066692_10923799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300005616\|Ga0068852_100945300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300005718\|Ga0068866_10342689	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300005719\|Ga0068861_100144519	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300005834\|Ga0068851_10116333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1433	Open in IMG/M
3300005840\|Ga0068870_10753491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300005995\|Ga0066790_10002685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7761	Open in IMG/M
3300006041\|Ga0075023_100019010	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300006041\|Ga0075023_100616572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300006050\|Ga0075028_100059403	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300006050\|Ga0075028_100278227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300006052\|Ga0075029_100567944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300006059\|Ga0075017_100162677	All Organisms → cellular organisms → Bacteria → Proteobacteria	1596	Open in IMG/M
3300006059\|Ga0075017_100305408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300006059\|Ga0075017_100908177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300006086\|Ga0075019_10155534	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300006162\|Ga0075030_100257057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300006174\|Ga0075014_100764226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300006237\|Ga0097621_100949708	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300006806\|Ga0079220_10242257	Not Available	1073	Open in IMG/M
3300006852\|Ga0075433_10019098	All Organisms → cellular organisms → Bacteria	5702	Open in IMG/M
3300006854\|Ga0075425_100021163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7120	Open in IMG/M
3300006854\|Ga0075425_102474015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300006903\|Ga0075426_10002097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14327	Open in IMG/M
3300006954\|Ga0079219_12125108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300007076\|Ga0075435_101139638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300009029\|Ga0066793_10576571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300009092\|Ga0105250_10385591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300009101\|Ga0105247_10042889	All Organisms → cellular organisms → Bacteria	2771	Open in IMG/M
3300009147\|Ga0114129_10815872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189	Open in IMG/M
3300009177\|Ga0105248_10173805	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300010335\|Ga0134063_10002306	Not Available	6847	Open in IMG/M
3300010371\|Ga0134125_10009589	All Organisms → cellular organisms → Bacteria → Acidobacteria	10890	Open in IMG/M
3300010373\|Ga0134128_10120711	All Organisms → cellular organisms → Bacteria	2972	Open in IMG/M
3300010375\|Ga0105239_10039232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5188	Open in IMG/M
3300010396\|Ga0134126_10019472	All Organisms → cellular organisms → Bacteria	8614	Open in IMG/M
3300010397\|Ga0134124_10005292	All Organisms → cellular organisms → Bacteria	10381	Open in IMG/M
3300010400\|Ga0134122_11654374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300012960\|Ga0164301_10052419	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300012986\|Ga0164304_11499916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300013104\|Ga0157370_10185277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1933	Open in IMG/M
3300013105\|Ga0157369_10027964	All Organisms → cellular organisms → Bacteria → Acidobacteria	6245	Open in IMG/M
3300013296\|Ga0157374_10004076	All Organisms → cellular organisms → Bacteria → Acidobacteria	12272	Open in IMG/M
3300013297\|Ga0157378_12933008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300013308\|Ga0157375_10029294	All Organisms → cellular organisms → Bacteria → Acidobacteria	5175	Open in IMG/M
3300014968\|Ga0157379_10501249	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300015077\|Ga0173483_10360147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300017955\|Ga0187817_10172400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1378	Open in IMG/M
3300018431\|Ga0066655_10608883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300025711\|Ga0207696_1115104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300025899\|Ga0207642_10278451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300025900\|Ga0207710_10032879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2273	Open in IMG/M
3300025900\|Ga0207710_10555039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300025901\|Ga0207688_10653825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300025904\|Ga0207647_10006262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8668	Open in IMG/M
3300025912\|Ga0207707_10113425	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2369	Open in IMG/M
3300025913\|Ga0207695_11584420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300025918\|Ga0207662_10175551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1376	Open in IMG/M
3300025918\|Ga0207662_10527697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300025923\|Ga0207681_10337851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1202	Open in IMG/M
3300025923\|Ga0207681_11347303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300025926\|Ga0207659_10486566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300025938\|Ga0207704_10020588	Not Available	3494	Open in IMG/M
3300025961\|Ga0207712_10004940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8426	Open in IMG/M
3300025986\|Ga0207658_10754992	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300026035\|Ga0207703_10153761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2008	Open in IMG/M
3300026067\|Ga0207678_10000692	All Organisms → cellular organisms → Bacteria → Acidobacteria	30777	Open in IMG/M
3300026075\|Ga0207708_10827941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300026294\|Ga0209839_10005966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5524	Open in IMG/M
3300026297\|Ga0209237_1003349	All Organisms → cellular organisms → Bacteria	9740	Open in IMG/M
3300027894\|Ga0209068_10002169	All Organisms → cellular organisms → Bacteria → Acidobacteria	9550	Open in IMG/M
3300027894\|Ga0209068_10425246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300027898\|Ga0209067_10313063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300027910\|Ga0209583_10017134	All Organisms → cellular organisms → Bacteria	2239	Open in IMG/M
3300027911\|Ga0209698_10047921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3766	Open in IMG/M
3300027911\|Ga0209698_10524571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300028381\|Ga0268264_10052092	All Organisms → cellular organisms → Bacteria	3412	Open in IMG/M
3300032180\|Ga0307471_100279491	Not Available	1743	Open in IMG/M
3300032770\|Ga0335085_10264750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2057	Open in IMG/M
3300032829\|Ga0335070_10048676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4681	Open in IMG/M
3300032892\|Ga0335081_12293130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300033412\|Ga0310810_11375815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300033433\|Ga0326726_10020724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5715	Open in IMG/M
3300033433\|Ga0326726_10122396	Not Available	2350	Open in IMG/M
3300033433\|Ga0326726_10189656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1893	Open in IMG/M
3300033433\|Ga0326726_10791244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300033433\|Ga0326726_11416412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.41%
Host-Associated	Host-Associated	42.59%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	42.59%
Terrestrial	Environmental → Terrestrial	40.74%
Aquatic	Environmental → Aquatic	16.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.78%
Sediment	Environmental → Aquatic → Sediment	15.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.89%
Peat	Environmental → Terrestrial → Peat	4.63%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.04%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	15.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	6.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.63%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_116327341	3300000891	Soil	NCPECESLSQVFESKQTGHFAARSAALYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
JGI12627J18819_103398351	3300001867	Forest Soil	MTNCLECQNLSRVYESKLTKYLAARSAVLYRISTEFAAKQQVDMERAKNDMEDHLLTCPKVRCVALVPLQGSSAWKDYSSTAGRDS*
JGI25381J37097_10109251	3300002557	Grasslands Soil	MTNCLECQNLSRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNGLEDHLLICPSPLR*
Ga0062590_1021960922	3300004157	Soil	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI
Ga0066671_102089312	3300005184	Soil	MTNCLECQILSRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNGLEDHLLICPSPLR*
Ga0065712_106111671	3300005290	Miscanthus Rhizosphere	MTKCLECKNLKRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDVEEHLLTCPFAARVKCLALLPLQESSALWRPRL*
Ga0065715_100151932	3300005293	Miscanthus Rhizosphere	MRNCPECESLSQVFESKQTGHFAARSAVLYQISTEFAAKQQVDMERARNDMEDHLSVCSFAAEVRI*
Ga0068869_1000297783	3300005334	Miscanthus Rhizosphere	MTNCLKCENLNRVYESRLTRYLAARSAALYRISTEFAAKQQVEMERAKNDMEEHRLICPFVAKVRCLALVPLQEAFNLWRFQ*
Ga0068868_1013159741	3300005338	Miscanthus Rhizosphere	MTNCLKCENLNRVYESRLTRYLAARSAALYRISTEFAAKQQVEMERAKNDMEEHRLICPFVAKVRCLALVPLQEAFNLWQFQ*
Ga0070660_1000110531	3300005339	Corn Rhizosphere	NCPECESLSQVFESKQTGYFAARYALLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0070687_1000418823	3300005343	Switchgrass Rhizosphere	MRNCPECESLSQVFESKLTGYFAARSAVLYQISTEFAAKQQVDMERSRNDMEEHLSVCSFAAEVRI*
Ga0070692_100918383	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0070674_1001424771	3300005356	Miscanthus Rhizosphere	KNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0070688_1002747472	3300005365	Switchgrass Rhizosphere	MKNCPECESLSQVFESKLTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0070667_1000596353	3300005367	Switchgrass Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0070701_104886521	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTKCLECKNLKRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDVEEHLLTCPFAARVKCLALLPLQESSALWR
Ga0070705_1009854891	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRNCPECESLSQVFESKQTGYFAARYALLYQISTEFAAKQQVDMERAKNDVEEHLLTCPFAARVKCLALLPLQESSALWRPRL*
Ga0070700_1000228032	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDTEDHLSVCSFAAEVRI*
Ga0066681_107590011	3300005451	Soil	MTNCLECQNLSRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNGLEDHLLICPSPL
Ga0070662_1019614051	3300005457	Corn Rhizosphere	MTNCLKCENLNRVYESRLTRYLAARSAALYRISTEFAAKQQVEMERAKNDMEEHRLICPFVAKVRCLALV
Ga0070686_1000720942	3300005544	Switchgrass Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEDHLSVCSFAAEVRI*
Ga0066692_109237991	3300005555	Soil	MTNCLECQNLSRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNGLEDHLLICP
Ga0068852_1009453002	3300005616	Corn Rhizosphere	MTNCLKCENLNRVYESRLTRYLAARSAAFYRISTEFAAKQQVDMERAKNDMEEHLLICPFVAKVRCLALVPLQEAFNLWQFQ*
Ga0068866_103426892	3300005718	Miscanthus Rhizosphere	MTKCLECKNLKRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDVEEHLLTCPFAARVKCLALLPLQESSALWRPQL*
Ga0068861_1001445193	3300005719	Switchgrass Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSVVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0068851_101163332	3300005834	Corn Rhizosphere	MTKCLECKNLKRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0068870_107534911	3300005840	Miscanthus Rhizosphere	NCPECESLSQVFESKQTGYFAARSVVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0066790_100026854	3300005995	Soil	MNNCPECESLNQMFESKLTGYLAARSAVLYQISTEFAAKQQVDMERAKNDMEEHLSICSFAADMRT*
Ga0075023_1000190103	3300006041	Watersheds	MTNCPDCENLNQVFESKLSNYLAARSFYRISTEFAAKQQVDMERAKDDMEEHRVSCRSAAKLES*
Ga0075023_1006165721	3300006041	Watersheds	MTRCSECESFNRVFESKLTEYLAARSAVLYRISTEFAARQQVDMERAKSDMEDHLSICSCASTQRA*
Ga0075028_1000594033	3300006050	Watersheds	MTNCPDCENLNQVFESKLSNYLAARSSVLYRISTEFAAKQQVDMERAKDDMEEHRVSCRSAAKLES*
Ga0075028_1002782271	3300006050	Watersheds	MTRCSECESLNRVFESKLTEYLAARSAVLYRISTEFAARQQVDMERAKSDMEDHMSICSCASTQRA*
Ga0075029_1005679442	3300006052	Watersheds	MTCCPECENLNRVFESKLTEYLAARSAVLYRISTEFAAKQQVDMERAKNDREEHRSICSSATKLRA*
Ga0075017_1001626772	3300006059	Watersheds	MKNCPECESLNQIFESRLTGYLAARAAVLYQISTEFAAKQQVDMERAKNDMEEHRSICSFAADVRT*
Ga0075017_1003054082	3300006059	Watersheds	MKNCWECENLNRVFESELAKYLAARSAALYRISTEFAAMQQVDMERAKNDMEEHLLVCRFATKVRCLALVPLLESFAAK*
Ga0075017_1009081771	3300006059	Watersheds	MTNCLECKNLNRVFQSELTKYLVARSAAFYRISTEFAAKRQVDMERAKNDMEEHLLICRFATKARCLVPVQESSAV*
Ga0075019_101555341	3300006086	Watersheds	ECENLNRVFESKLTEYLAARSAVLYRISTEFAAKQQVDMERAKNDREEHRSICSSATKLRA*
Ga0075030_1002570574	3300006162	Watersheds	MKNCWECENLNRVFESELAKYLAARSAALYRISTEFAAMQQVDMERAKNDMEEHLLVCRFATKVRCLAPVP*
Ga0075014_1007642262	3300006174	Watersheds	MTNCLECKNLNLVFKSELTKYLVARSAAFYRISTEFAAKRQVDMERAKNDMEEHLLICRFATKARCLVPVQESSAVE*
Ga0097621_1009497082	3300006237	Miscanthus Rhizosphere	MTNCLECENLNRVYESRLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDVEEHLLICPFVAKLRCLSLVPLQESFNLWRFQ*
Ga0079220_102422571	3300006806	Agricultural Soil	MTNCLECQNLSRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDMEDHLLTCPSPLR*
Ga0075433_100190984	3300006852	Populus Rhizosphere	MTNCLECENLNRVYGSKLAKYHAARCAVLYRINTEFAARQQVDMERAKNDMEEHLLTCPFATKAGCLMPQESSVLERFQ*
Ga0075425_1000211637	3300006854	Populus Rhizosphere	MTNCLECENLNRVYGSKLAKYHAARCAVLYRINTEFAARQQVDMERAKNDMEEHLLTCPFATKAGCLMPLQESSVLERFQ*
Ga0075425_1024740151	3300006854	Populus Rhizosphere	LNRVYGSMLANYLAARSAVLYRINTEFAAKQQVDMERAKNDLEEHLLTCPFATNAGCLMPLQESSALEQFH*
Ga0075426_1000209725	3300006903	Populus Rhizosphere	MTNCLECENLNRVYGSKLAKYHAARCAVLYRINTEFAARQQVDMERAKNDMEEHLLTCPFATKAGCLMPQESSVLERFQ
Ga0079219_121251082	3300006954	Agricultural Soil	MTNCLECKNLKLVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDVEEHLLTCPFAARVKCLALLPLQESSALWRPRL*
Ga0075435_1011396381	3300007076	Populus Rhizosphere	MTNCRECENLNRVYGSMLANYLAARSAVLYRINTEFAAKQQVDMERAKNDLEEHLLTCPFATNAGCLMPLQESSALEQFH*
Ga0066793_105765712	3300009029	Prmafrost Soil	MTNCLESENLNWVYESKLTNYLPARSAVLYRISTEFAAKQQVDMERAKNDIQEHILICTSVIVR
Ga0105250_103855912	3300009092	Switchgrass Rhizosphere	MKNCPECESLSQVFESKQTGHFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0105247_100428893	3300009101	Switchgrass Rhizosphere	MKNCPECESLSQVFESKQTGYFAARYALLYQISTEFAAKQQVDMERARNDMEDHLSVCSFAAEVRI*
Ga0114129_108158723	3300009147	Populus Rhizosphere	MTNCLECENLNRVYGSKLAKYHAARCAVLYRINTEFAARQQVDMERAKNDMEEHLLTCPFGTKAGCLMPLQESSVLERFQ*
Ga0105248_101738053	3300009177	Switchgrass Rhizosphere	MTKCLECKNLKRVYEFKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDVEEHLLTCPFAARVKCLALLPLQESSALWRPRL*
Ga0134063_1000230610	3300010335	Grasslands Soil	MTNCLECQNLSRVYESKLTSYLAARSAVLYRISTEFAAKQQVDMERAKNGLEDHLLICPSPLR*
Ga0134125_100095893	3300010371	Terrestrial Soil	VKNCPECESLSQVFESKLTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0134128_101207114	3300010373	Terrestrial Soil	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERAKNDVEEHLLTCRFAAKLKCLRVVRLPA*
Ga0105239_100392323	3300010375	Corn Rhizosphere	MTNCLKCENLNRVYESRLTRYLAARSAALYRISTEFAAKQQVELERAKNDMEEHRLICPFVAKVRCLALVPLQEAFNLWRFQ*
Ga0134126_100194726	3300010396	Terrestrial Soil	MRNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEDHLSVCSFAAEVRI*
Ga0134124_100052929	3300010397	Terrestrial Soil	MKNCPECESLSQVFESKQTGYFSARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0134122_116543741	3300010400	Terrestrial Soil	LSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0164301_100524193	3300012960	Soil	MKNCPECESLKQVFESKLTGYLAARSAVLYLISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0164304_114999162	3300012986	Soil	MKNCPECESLKQVFESKLTGYLAARSAVLYLISTEFAAQQQVDMERARNDMEEHLSICSLAVEILI*
Ga0157370_101852773	3300013104	Corn Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRIQVEFGVQDESRF*
Ga0157369_100279646	3300013105	Corn Rhizosphere	MRNCPECESLSQVFESKLTGYFAARSALLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0157374_100040769	3300013296	Miscanthus Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSVVLYQISTEFAAKQQVDTERARNDMEEHLSVCSFAAEVRI*
Ga0157378_129330081	3300013297	Miscanthus Rhizosphere	MKNCPECESLSQVFESKLTGYFAARSAVLYQISTEFAAKQQVDMERSRNDMEEHLSVCSFAAEVRI*
Ga0157375_100292943	3300013308	Miscanthus Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFVAKQQVDMERARNDMEEHLSVCSFAAEVRI*
Ga0157379_105012491	3300014968	Switchgrass Rhizosphere	MTKCLECKNLKRVYEFKLTRYLAARAAVLYRICTEFAAKQQVDMERAKNDVEEHLLTCPFAARVKCLALLPLQESSALWRPRL*
Ga0173483_103601472	3300015077	Soil	MRNCPECESLSQVFESKQTGYFAARSALLYQISTEFAAKQQVDMERSRNDMEEHLSVCSFAAEVRI*
Ga0187817_101724002	3300017955	Freshwater Sediment	MSNCLECKDLNRIFKSELTKYLVARSATFYRISTEFAAKRQVDMERAKNNMEEHLLICPLITKARCLVPVQESSAVE
Ga0066655_106088831	3300018431	Grasslands Soil	MTNCLECQNLSRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNGLEDHLLICPSPLR
Ga0207696_11151042	3300025711	Switchgrass Rhizosphere	MKNCPECESLSQVFESKQTGHFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI
Ga0207642_102784512	3300025899	Miscanthus Rhizosphere	MTKCLECKNLKRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDVEEHLLTCPFAARVKCLALLPLQESSALWRPRL
Ga0207710_100328793	3300025900	Switchgrass Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSVVLYQISTEFAAKQQVDTERARNDMEEHLSVCSFAAEVRI
Ga0207710_105550391	3300025900	Switchgrass Rhizosphere	KCENLNRVYESRLTRYLAARSAALYRISTEFAAKQQVEMERAKNDMEEHRLICPFVAKVRCLALVPLQEAFNLWRFQ
Ga0207688_106538251	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERAKNDVEEHLLTCPFAARVKCLA
Ga0207647_100062625	3300025904	Corn Rhizosphere	MTNCLKCENLNRVYESRLTRYLAARSAALYRISTEFAAKQQVEMERAKNDMEEHRLICPFVAKVRCLALVPLQEAFNLWRFQ
Ga0207707_101134251	3300025912	Corn Rhizosphere	PRSASRGSSRNCSQEWPMKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI
Ga0207695_115844202	3300025913	Corn Rhizosphere	MTNCLKCENLNRVYESRLTRYLAARSAALYRISTEFAAKQQVEMERAKNDMEEHRLICPFVAKVRCLALVPLQEA
Ga0207662_101755512	3300025918	Switchgrass Rhizosphere	MRNCPECESLSQVFESKLTGYFAARSAVLYQISTEFAAKQQVDMERSRNDMEEHLSVCSFAAEVRI
Ga0207662_105276971	3300025918	Switchgrass Rhizosphere	MTNCLKCENLNRVYESRLTRYLAARSAALYRISTEFAAKQQVEMERAKNDMEEHRLICPFVAKVRCLALVPLQEAFNLW
Ga0207681_103378511	3300025923	Switchgrass Rhizosphere	CKNLKRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI
Ga0207681_113473031	3300025923	Switchgrass Rhizosphere	MTKCLECKNLKRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDVEEH
Ga0207659_104865662	3300025926	Miscanthus Rhizosphere	MTKCLECKNLKRVYESKLTRYLAARSAVLYRISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI
Ga0207704_100205881	3300025938	Miscanthus Rhizosphere	MTNCLECENLNRVYESRLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDMEEHLLICPFVAKV
Ga0207712_1000494010	3300025961	Switchgrass Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEDHLSVC
Ga0207658_107549923	3300025986	Switchgrass Rhizosphere	TKCLECKNLKRVYEFKLTRYLAARSAVLYRISTEFAAKQQVDMERAKNDVEEHLLTCPFAARVKCLALLPLQESSALWRPRL
Ga0207703_101537611	3300026035	Switchgrass Rhizosphere	RGSSRNCSQEWPMKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI
Ga0207678_1000069210	3300026067	Corn Rhizosphere	MRNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLSVCSFAAEVRI
Ga0207708_108279413	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEEHLS
Ga0209839_100059666	3300026294	Soil	MNNCPECESLNQMFESKLTGYLAARSAVLYQISTEFAAKQQVDMERAKNDMEEHLSICSFAADMRT
Ga0209237_100334912	3300026297	Grasslands Soil	MTNCLECQNLSRVYESKLTSYLAARSAVLYRISTEFAAKQQVDMERAKNGLEDHLLICPSPLR
Ga0209068_100021696	3300027894	Watersheds	MTRCSECESLNRVFESKLTEYLAARSAVLYRISTEFAARQQVDMERAKSDMEDHMSICSCASTQRA
Ga0209068_104252462	3300027894	Watersheds	MTNCPDCENLNQVFESKLSNYLAARSSVLYRISTEFAAKQQVDMERAKDDMEEHRVSCRSAAKLES
Ga0209067_103130632	3300027898	Watersheds	CCPECENLNRVFESKLTEYLAARSAVLYRISTEFAAKQQVDMERAKNDREEHRSICSSATKLRA
Ga0209583_100171344	3300027910	Watersheds	MTNCPDCENLNQVFESKLSNYLAARSFYRISTEFAAKQQVDMERAKDDMEEHRVSCRSAAKLES
Ga0209698_100479214	3300027911	Watersheds	MTCCPECENLNRVFESKLTEYLAARSAVLYRISTEFAAKQQVDMERAKNDREEHRSICSSATKLRA
Ga0209698_105245713	3300027911	Watersheds	MKNCWECENLNRVFESELAKYLAARSAALYRISTEFAAMQQVDMERAKNDMEEHLLVCRFATKVRCLAPVP
Ga0268264_100520923	3300028381	Switchgrass Rhizosphere	MKNCPECESLSQVFESKQTGYFAARSAVLYQISTEFAAKQQVDMERARNDMEDHLSVCSFAAEVRI
Ga0307471_1002794912	3300032180	Hardwood Forest Soil	MTNCLECQNLSRLYESKLTKYLAARSAVLYRISTEFAAKQQVDMERAKNDMEDHLLTCPSPLS
Ga0335085_102647502	3300032770	Soil	MTICPKCENLTRTLDSAESKYRAARSAVLYRISTEFAAKQRVDLARARYDKEEHMLICPFVATVAAP
Ga0335070_100486764	3300032829	Soil	MTICQECENLLRAFECLEIRYRVARSAVLYRISTEFAAKQQVDMERARYDMEEHMLICPFAAAVAAPCR
Ga0335081_122931301	3300032892	Soil	CLECENLTRGFESQLRKYLAARSAVLYRISTEFAAKQQVNMERAKNDLEEHQLVCTFADKGRPSTADGQFLK
Ga0310810_113758151	3300033412	Soil	MRNCPECESLSQVFESKLTGYFAARSALLYQISTEFAAKQQVDMERARNDMEDHLSVCSFAAEVRI
Ga0326726_100207244	3300033433	Peat Soil	MTSCRECENLNRVFESKLTEYLAARSAVLYRINTQFAARRQVDMERAKNDMEEHMSTCSFAIQLRA
Ga0326726_101223962	3300033433	Peat Soil	MTICPECDNLIRAFDSKVSKYLAARSAVFYRISTEFAAKQQVDMERAKNDKEEHLLICPFAAKVAMAGPG
Ga0326726_101896562	3300033433	Peat Soil	MTNCLECKDLNRIFKSELTKYLVARSAAFYRISTEFAAKRQVDMERAKNDMEEHLLICRFATKAQCLVPVQESSAVE
Ga0326726_107912441	3300033433	Peat Soil	MTSCRECKSLSRVFESKLTEYVAARSAVLYRINTEFAARRQVDMERAKHDMEEHMSACSFAIQLRA
Ga0326726_114164122	3300033433	Peat Soil	MTSCRECKSLSRVFESKLTEYLAARSAVLYRINTEFAARRQVDMERAKNDMEEHTSNCSFAAQLQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090738

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences