NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F090735

Metagenome / Metatranscriptome Family F090735

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F090735
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 76 residues
Representative Sequence VEAQEPWALIRAFNRAHKDVVERLSGVDFATISPGEVSATWERTEREILLETNRKHDWEHRKSPWFRLYYHFY
Number of Associated Samples 98
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 60.19 %
% of genes near scaffold ends (potentially truncated) 44.44 %
% of genes from short scaffolds (< 2000 bps) 85.19 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (64.815 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(30.556 % of family members)
Environment Ontology (ENVO) Unclassified
(52.778 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(62.037 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 58.42%    β-sheet: 0.00%    Coil/Unstructured: 41.58%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF02769AIRS_C 9.26
PF04773FecR 5.56
PF01261AP_endonuc_2 3.70
PF00581Rhodanese 3.70
PF00282Pyridoxal_deC 1.85
PF02687FtsX 0.93
PF06441EHN 0.93
PF00361Proton_antipo_M 0.93
PF00149Metallophos 0.93
PF07969Amidohydro_3 0.93
PF07700HNOB 0.93
PF00069Pkinase 0.93
PF05694SBP56 0.93
PF00144Beta-lactamase 0.93
PF01408GFO_IDH_MocA 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.70
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 1.85
COG05962-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase foldCoenzyme transport and metabolism [H] 0.93
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.93
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.93
COG2367Beta-lactamase class ADefense mechanisms [V] 0.93

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms64.81 %
UnclassifiedrootN/A35.19 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001545|JGI12630J15595_10030005All Organisms → cellular organisms → Bacteria → Acidobacteria1127Open in IMG/M
3300001661|JGI12053J15887_10538590Not Available556Open in IMG/M
3300002245|JGIcombinedJ26739_100132979All Organisms → cellular organisms → Bacteria → Acidobacteria2348Open in IMG/M
3300004114|Ga0062593_100060587All Organisms → cellular organisms → Bacteria2432Open in IMG/M
3300004157|Ga0062590_101312351Not Available714Open in IMG/M
3300004463|Ga0063356_100452776All Organisms → cellular organisms → Bacteria → Acidobacteria1676Open in IMG/M
3300004479|Ga0062595_100439726All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300004479|Ga0062595_101706812Not Available593Open in IMG/M
3300005295|Ga0065707_10397592Not Available857Open in IMG/M
3300005334|Ga0068869_100856635All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300005347|Ga0070668_100682382All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300005356|Ga0070674_101967133Not Available532Open in IMG/M
3300005364|Ga0070673_101517321Not Available632Open in IMG/M
3300005367|Ga0070667_101910434Not Available559Open in IMG/M
3300005440|Ga0070705_100110500All Organisms → cellular organisms → Bacteria → Acidobacteria1755Open in IMG/M
3300005445|Ga0070708_100025015All Organisms → cellular organisms → Bacteria5102Open in IMG/M
3300005450|Ga0066682_10714580All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005518|Ga0070699_100074987All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2944Open in IMG/M
3300005536|Ga0070697_100047084All Organisms → cellular organisms → Bacteria3497Open in IMG/M
3300005563|Ga0068855_102527887Not Available510Open in IMG/M
3300005718|Ga0068866_11276598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20533Open in IMG/M
3300006041|Ga0075023_100138919Not Available883Open in IMG/M
3300006050|Ga0075028_100142211Not Available1260Open in IMG/M
3300006057|Ga0075026_101055815Not Available508Open in IMG/M
3300006174|Ga0075014_100833358Not Available547Open in IMG/M
3300006175|Ga0070712_101381048Not Available614Open in IMG/M
3300006354|Ga0075021_10212891Not Available1182Open in IMG/M
3300006854|Ga0075425_100737710Not Available1130Open in IMG/M
3300007076|Ga0075435_102043724All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300007258|Ga0099793_10124707All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300009038|Ga0099829_10000732All Organisms → cellular organisms → Bacteria → Acidobacteria17360Open in IMG/M
3300009038|Ga0099829_10873223Not Available746Open in IMG/M
3300009088|Ga0099830_10005593All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7239Open in IMG/M
3300009089|Ga0099828_10810813Not Available838Open in IMG/M
3300009090|Ga0099827_11872856Not Available523Open in IMG/M
3300009143|Ga0099792_11053554Not Available546Open in IMG/M
3300009174|Ga0105241_10293436All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1393Open in IMG/M
3300009176|Ga0105242_10281699All Organisms → cellular organisms → Bacteria → Acidobacteria1510Open in IMG/M
3300010159|Ga0099796_10151196All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300010401|Ga0134121_10256598All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1532Open in IMG/M
3300010403|Ga0134123_10601737All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1057Open in IMG/M
3300011120|Ga0150983_10497300Not Available587Open in IMG/M
3300011269|Ga0137392_10001289All Organisms → cellular organisms → Bacteria14331Open in IMG/M
3300011270|Ga0137391_10220841All Organisms → cellular organisms → Bacteria1646Open in IMG/M
3300012189|Ga0137388_10027684All Organisms → cellular organisms → Bacteria4368Open in IMG/M
3300012200|Ga0137382_10643483All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300012202|Ga0137363_10162797All Organisms → cellular organisms → Bacteria1763Open in IMG/M
3300012203|Ga0137399_10227261All Organisms → cellular organisms → Bacteria1524Open in IMG/M
3300012205|Ga0137362_10080659All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2712Open in IMG/M
3300012205|Ga0137362_10125260All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae2181Open in IMG/M
3300012205|Ga0137362_10537161All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1010Open in IMG/M
3300012208|Ga0137376_10364555All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300012357|Ga0137384_11558344Not Available510Open in IMG/M
3300012361|Ga0137360_10335240All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1263Open in IMG/M
3300012362|Ga0137361_11662161Not Available559Open in IMG/M
3300012582|Ga0137358_10143118All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1627Open in IMG/M
3300012683|Ga0137398_11003942All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300012924|Ga0137413_11475429Not Available552Open in IMG/M
3300012929|Ga0137404_10157312All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1895Open in IMG/M
3300012929|Ga0137404_10434387All Organisms → cellular organisms → Bacteria → Acidobacteria1163Open in IMG/M
3300012929|Ga0137404_11094788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20731Open in IMG/M
3300012930|Ga0137407_11041031All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium775Open in IMG/M
3300012961|Ga0164302_10868327Not Available689Open in IMG/M
3300013296|Ga0157374_11147912All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300015242|Ga0137412_11076277All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300015264|Ga0137403_10000700All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis43192Open in IMG/M
3300020004|Ga0193755_1119364All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300020579|Ga0210407_10236555Not Available1422Open in IMG/M
3300020582|Ga0210395_11027722Not Available610Open in IMG/M
3300021178|Ga0210408_10351166Not Available1176Open in IMG/M
3300021479|Ga0210410_10757612Not Available854Open in IMG/M
3300022722|Ga0242657_1230629Not Available523Open in IMG/M
3300022724|Ga0242665_10324698All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300025509|Ga0208848_1055846Not Available837Open in IMG/M
3300025912|Ga0207707_10860866All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300025915|Ga0207693_11186883Not Available576Open in IMG/M
3300025920|Ga0207649_10807834All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300025921|Ga0207652_10070968All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3025Open in IMG/M
3300025924|Ga0207694_10480399All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1039Open in IMG/M
3300025932|Ga0207690_11324788Not Available602Open in IMG/M
3300025935|Ga0207709_10329369All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1146Open in IMG/M
3300025935|Ga0207709_11505304All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300025942|Ga0207689_10058672All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3165Open in IMG/M
3300025942|Ga0207689_10797386All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300025972|Ga0207668_10896172All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300025981|Ga0207640_11193332All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300026095|Ga0207676_12247197Not Available543Open in IMG/M
3300026118|Ga0207675_100131391All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2374Open in IMG/M
3300026291|Ga0209890_10069222All Organisms → cellular organisms → Bacteria → Terrabacteria group1268Open in IMG/M
3300026482|Ga0257172_1011736All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300027432|Ga0209421_1049029Not Available840Open in IMG/M
3300027651|Ga0209217_1221252Not Available503Open in IMG/M
3300027667|Ga0209009_1082477All Organisms → cellular organisms → Bacteria → Acidobacteria813Open in IMG/M
3300027846|Ga0209180_10000906All Organisms → cellular organisms → Bacteria → Acidobacteria14364Open in IMG/M
3300027903|Ga0209488_10410658Not Available1001Open in IMG/M
3300027903|Ga0209488_10915495All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300027910|Ga0209583_10676046Not Available535Open in IMG/M
3300027915|Ga0209069_10881474All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300028381|Ga0268264_11632785All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300028807|Ga0307305_10439645All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300028828|Ga0307312_10161109All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1428Open in IMG/M
3300028884|Ga0307308_10255432All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300028906|Ga0308309_10815802Not Available811Open in IMG/M
3300029636|Ga0222749_10073568All Organisms → cellular organisms → Bacteria1556Open in IMG/M
3300032180|Ga0307471_102207616All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300032180|Ga0307471_102535683All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300032893|Ga0335069_10638900All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1217Open in IMG/M
3300033475|Ga0310811_10533865All Organisms → cellular organisms → Bacteria → Acidobacteria1211Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil30.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.41%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds6.48%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.78%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.85%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.85%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.93%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025509Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300027432Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12630J15595_1003000533300001545Forest SoilMVALHSKIMKVRVFNPVEAQEPSPLIRAFKRAHKDVIGRLSGVDFAPISAEGATAKWERMEREILLETNRKHDWEHRNSPWFRLYYHFY*
JGI12053J15887_1053859013300001661Forest SoilMEAHEPSPLIRAFNRAHKDVVERLSGVDFSPISPAEASAMWDSTEREILLETNRKHDWEHRKSPWFRLYYDFY*EVASG*
JGIcombinedJ26739_10013297913300002245Forest SoilMEAQEPSPLIRAFTRARKDVVERLSGIDFSPISPAEATAIWEKTEQAILLETNRKHDWEHRNSPWFRLYYHFY*
Ga0062593_10006058743300004114SoilVEAQEPWALIRAFNRAHKDVVERLSGVDFATISPGEVSATWERTEREILLETNRKHDWEHRKSPWFRLYYHFY*
Ga0062590_10131235113300004157SoilSPLVRAFARARKDVVERMSGVDFAPMTPEEADAKWQRAEQEVLLETNRAHDWRHRHSPWFRLYYHFF*
Ga0063356_10045277633300004463Arabidopsis Thaliana RhizosphereVEAQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC*
Ga0062595_10043972633300004479SoilMEAQEPSTLVRAFTRAHKDVVERLSGVDFSPISPAEVNALWEKTEREILLETNRKHDWEHRNSPWFRLYYHFY*
Ga0062595_10170681213300004479SoilVEAQEPWALIRAFNRAHKDVVERLSGVDFATISPGEVSATWERTEREILLETNRKHDWEHRKS
Ga0065707_1039759223300005295Switchgrass RhizosphereEDHYLTVEAQEPWALIRAFNRAHKDVVERLSGVDFATISPGEVSATWERTEREILLETNRKHDWEHRKSPWFRLYYHFY*
Ga0068869_10085663513300005334Miscanthus RhizosphereNMEAQEPSTLVRAFTRAHKDVVERLSGVDFSPISPAEVNALWEKTEREILLETNRKHDWEHRNSPWFRLYYHFY*
Ga0070668_10068238213300005347Switchgrass RhizosphereVEAQEPWALIRAFNRAHKDVVERLSGVDFATISPGEVSATWERTEREILLETNRKHDWEHRKSPWFRLYYHFC*
Ga0070674_10196713313300005356Miscanthus RhizosphereVEAQEPWALIRAFNRAHKDVVERLSGVDFATISPGEVSATWERTEREILLETNRKHDWEHRKSPWYRLYYHFC*
Ga0070673_10151732113300005364Switchgrass RhizosphereSLANTVEAQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC*
Ga0070667_10191043413300005367Switchgrass RhizosphereMEAQEPSTLVRAFTRAHKDVVERLSGVDFSPISPAEVNGLWEKTEREILLETNRKHDWEHRNSPWFRLYYHF
Ga0070705_10011050033300005440Corn, Switchgrass And Miscanthus RhizosphereVETQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC*
Ga0070708_10002501563300005445Corn, Switchgrass And Miscanthus RhizosphereMVVLHSKIVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREILLETNRKHDWEHRKSPWFRLYYHFY*
Ga0066682_1071458023300005450SoilVEEPEASPLIRAFKRAHKDVVERLSGVDFAPMSAGEANAKWESVERDILLQTNRKHDWEHRNSPWFRLYYDYF*
Ga0070699_10007498733300005518Corn, Switchgrass And Miscanthus RhizosphereMVVLHSKIVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREILLETNRKHDWEHRKSPWFRLYYHFYREVASRE*
Ga0070697_10004708453300005536Corn, Switchgrass And Miscanthus RhizosphereMVVLHSKIVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREILLETNRKHDWEHRKSPWFRLYYHFY*EVASRE*
Ga0068855_10252788713300005563Corn RhizosphereVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYH
Ga0068866_1127659823300005718Miscanthus RhizosphereVEAQEPWALIRAFNRAHKDVVERLSGVDFATISPGEVSATWERTEREILLETNRKHDWEHRKSPWFRLYY
Ga0075023_10013891923300006041WatershedsLIRAFTRAHKDVVNHLSGVDFAPMSPAEANAEWERSEREVLRETNRKHDWEHRDS
Ga0075028_10014221143300006050WatershedsMEAQEPSPLIRAFTRAHKDVVERLSGVDFSPISPAEATAIWEKTEQAILLETNRKHDWEHRKSPWFRLYYHFY*
Ga0075026_10105581513300006057WatershedsMVFNTMEAEGPSALIRAFKKAHKDVVERLSGVDFGPIPPEEASARWERTEREILLEANRKHDWEHRKSPWFRLYYHFY*
Ga0075014_10083335823300006174WatershedsMVLVHLKIVKVLVFNTVEAQEPSALIRAFKRAHKDVVERLSGVDFAPIPPEEASARWERTEREILLETNRKHDWEHRESPWFRLYYHFY*
Ga0070712_10138104813300006175Corn, Switchgrass And Miscanthus RhizosphereMEAQEPSTLVRAFTRAHKDVVERLSGVDFSPISPAEVNALWEKTEREILLETNRKHDWEHRNSPWFRLYYHFH*
Ga0075021_1021289143300006354WatershedsTRAHKDVVERLSGVDFSPISPAEATAIWEKTEQAILLETNRKHDWEHRKSPWFRLYYHFY
Ga0075425_10073771013300006854Populus RhizosphereMIIHMAGGTELFTVEEPEASPLIRAFKRAHKDVVERLSGVDFAPMSACEANAKWESVERDILLQTNRKHDWEHRNSPWFRLYYDYF*
Ga0075435_10204372423300007076Populus RhizosphereIHMAGGTELFTVEEPEASPLIRAFKRAHKDVVERLSGVDFAPMSACEANAKWESVERDILLQTNRKHDWEHRNSPWFRLYYDYF*
Ga0099793_1012470723300007258Vadose Zone SoilVVVLHSKIVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREILLETNRKHDWEHRKSPWFRLYYHFY*
Ga0099829_10000732123300009038Vadose Zone SoilMVVLHSKTVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREILLETNRKHDWEHRKSPWFRLYYHFY*
Ga0099829_1087322313300009038Vadose Zone SoilVEEQEASPLIRAFKRAHKDAVERLSGVDFAPMSAGEANARWESMEREILLQTNRKHDWEHRKSPWFRLYYDFF*
Ga0099830_1000559353300009088Vadose Zone SoilVVVLHSKIVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREVLLETNRKHDWEHRKSPWFRLYYHFY*
Ga0099828_1081081323300009089Vadose Zone SoilMVFNTMEAQEPSALIRAFKRAHKDVVERLSGVDFAPLPPGEASARWERTEREILLETNRKHDWEHRKSPWFRLYYHFYREVR*
Ga0099827_1187285613300009090Vadose Zone SoilMEAQEPSPLIRAFNRAHKDVAERLSGVDFSPIPPAEARAIWEKTEREILLETNRKHDWEHRKSPWFRLYYDFY*
Ga0099792_1105355413300009143Vadose Zone SoilMVVLHSKTVKIWVFKTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREILLETNRKHDWEHRKSPWFRLYYHFY*
Ga0105241_1029343623300009174Corn RhizosphereGSLANTVEAQKPSVLIRAFNRAHKDVVESLSGVDFAPIPPGDILATWEKAERGILLDTNRKHDWENRNSPWFRLYYHFC*
Ga0105242_1028169913300009176Miscanthus RhizosphereVEAQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNS
Ga0099796_1015119623300010159Vadose Zone SoilMEAHEPSRLIRAFNRAHKDVVERLSGVDFSPISPAEASALWDSTEREILRETNRKHDWEHRKSPWFRLYYDFY*
Ga0134121_1025659823300010401Terrestrial SoilVGPSLPGKVHRIVESQEPSALIRAFKRAHKDVVERLSGVDFAPISPGEASAKWERTEREVLLETNRKHDWEHRKSPWFRLYYHFY*
Ga0134123_1060173713300010403Terrestrial SoilPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC*
Ga0150983_1049730013300011120Forest SoilVELRKPSLLIRAFTRAHKDVVNHLSGIDFAPMSPAEANAAWERSELEVLRETNRRHDWEHRESPWFRLYYHFY*
Ga0137392_1000128943300011269Vadose Zone SoilMVVLHSKIVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREVLLETNRKHDWEHRKSPWFRLYYHFY*
Ga0137391_1022084113300011270Vadose Zone SoilRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREILLETNRKHDWEHRKSPWFRLYYHFY*
Ga0137388_1002768453300012189Vadose Zone SoilMVVLHSKTVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREVLLETNRKHDWEHRKSPWFRLYYHFY*
Ga0137382_1064348323300012200Vadose Zone SoilMAGGTELFTVEEPEASPLIRAFKRAHKDVVERLSGVDFAPMSVDEANAKWESVERDILLQTNRKHDWEHRNSPWFRLYYDYF*
Ga0137363_1016279713300012202Vadose Zone SoilMVFNTMEGQEPSALIRAFKRAHKDVVERLSGVDFAPLPPGEASARWERTEREILLETNRKHDWEHRKSPWFRLYYHFYREVR*
Ga0137399_1022726123300012203Vadose Zone SoilMVVRHSKIVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREILLETNRKHDWEHRKSPWFRLYYHFY*
Ga0137362_1008065943300012205Vadose Zone SoilMEAHEPSRLIRAFNRAHKDVVERLSGVDFSPISPAQASAMWDSTEREILLETNRKHDWEHRKSPWFRLYYDFY*
Ga0137362_1012526023300012205Vadose Zone SoilVEEQEASPLIRAFKRAHKDVVERLSGVDFAPMSAGEANARWESMEREILLQTNRKHDWEHRKSPWFRLYYDFF*
Ga0137362_1053716113300012205Vadose Zone SoilGSFAMVFNTMEGQEPSALIRAFKRAHKDVVERLSGVDFAPLPPGEASARWERTEREILLETNRKHDWEHRKSPWFRLYYHFY*
Ga0137376_1036455533300012208Vadose Zone SoilMAGGTELFTVEEPEASPLIRAFKRAHKDVVERLSGVDFAPMSAGEANAKWESVERDILLQTNRKHDWEHRNSPWFRLYYDYF*
Ga0137384_1155834413300012357Vadose Zone SoilVEDQETSPLIRAFKRAHKDVVERLSGVDFSPMSPGEANAKWESMEREILLQTNRKHDWEHRRS
Ga0137360_1033524023300012361Vadose Zone SoilMEAQEPSPLIRAFTRAHKDVVERLSGIDFSPISPAEASAMWDSTEREILLETNRKHDWEHRKSPWFRLYYDFY*
Ga0137361_1166216113300012362Vadose Zone SoilVEEQEASPLIRAFKRAHKDVVERLSGVDFAPMSAGEANARWESMEREILLQTNRKHDWEHRKSPWFRL
Ga0137358_1014311833300012582Vadose Zone SoilMEAHQPTPLIRAFNRAHKDVVERLSGVDFSPISPAQASAMWDSTEREILLETNRKHDWEHRKSPWFRLYYDFY*
Ga0137398_1100394213300012683Vadose Zone SoilMEAHQPSPLIRAFNRAHKDVVERLSGVDFSPISPAEASAMWDSTEREILLETNRKHDWEHRKSPWFRLYYDFY*
Ga0137413_1147542913300012924Vadose Zone SoilMEAHEPSPLIRAFNRAHKDVVERLSGVDFSPISPAEASAMWDSTEREILLETNRKHDWEHRKSPWFRLYYDFY*
Ga0137404_1015731233300012929Vadose Zone SoilFNRAHKDVVERLSGVDFSPISPAEASAMWDSTEREILLETNRKHDWEHRKSPWFRLYYDFY*
Ga0137404_1043438723300012929Vadose Zone SoilVEDQETSPLIRAFKRAHKDVVERLSGVDFSPMSPGEANARWESMEREILLQTNRKHDWEHRRSPWFRLHYDFF*
Ga0137404_1109478823300012929Vadose Zone SoilMAGRTELLTVEEPEASPLIRAFKRAHKDVVERLSGVDFAPMSAGEANAKWESVERDILLQTNRKHDWEHRNSPWFRLYYDYF*
Ga0137407_1104103113300012930Vadose Zone SoilTVEDQETSPLIRAFKRAHKDVVERLSGVDFSPMSPGEANAKWESMEREILLQTNRKHDWEHRRSPWFRLYYDFF*
Ga0164302_1086832713300012961SoilVDTQTPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFR
Ga0157374_1114791213300013296Miscanthus RhizosphereRAHKDVVERLSGVDFSPISPAEVNALWEKTEREILLETNRKHDWEHRNSPWFRLYYHFY*
Ga0137412_1107627723300015242Vadose Zone SoilMEAQEPSPLIRAFTRAHKDVVERLSGIDFSPIPAAEATAMFEKTEQTILLETNRKHDWEHRNSPWFRLYSDFY*
Ga0137403_10000700123300015264Vadose Zone SoilMEAHEPSPLIRAFNRAHKDVVERLSGVDFSPISPAQASAMWDSTEREILLETNRKHDWEHRKSPWFRLYYDFY*
Ga0193755_111936413300020004SoilMYSHSFRTRSFRAGRKIVHMAGRTELLTVEEPEASPLIRAFKRAHKDVVERLSGVDFAPMSVDEANAKWESVERDILLQTNRKHDWEHRNSPWFRLYYDYF
Ga0210407_1023655533300020579SoilVELRKPSLLIRAFTRAHKDVVNHLSGIDFAPMSPAEANAAWERSELEVLRETNRRHDWEHRESPWFRLYYHFY
Ga0210395_1102772223300020582SoilVELRKPSLLIRAFTRAHKDVVNHLSGIDFAPMSPAEANAAWERSELEVLRETNRRHDWEHRESPWFRLY
Ga0210408_1035116633300021178SoilAQEPSPLIRAFTRAHKDVVERLSGIDFSPISPAEATAIWEKTEQAILLETNRKHDWEHRNSPWFRLYYHFY
Ga0210410_1075761233300021479SoilMEAQEPSPLIRAFTRAHKDVVERLSGIDFSPISPAEATAIWEKTEQAILLETNRKHDWEHRNSPWFRLYYHFY
Ga0242657_123062913300022722SoilVELRKPSLLIRAFTRAHKDVVNHLSGIDFAPMSPAEATAAWERSELEVLRETNRRHDWEHRES
Ga0242665_1032469813300022724SoilRAFNRAHKDVVERLSGVDFASISPEAASATWERTEQEILLETNRKHDWEHRKSPWFRLYYDFF
Ga0208848_105584613300025509Arctic Peat SoilSAKFRISNTRIFNIVEQQESSRLIRAFQLAHKDVVNRLSGVDFSPMSADQADAEWERTERNVLLETNKKHDWEHRDSPWFRLYYHFY
Ga0207707_1086086613300025912Corn RhizosphereVEAQEPWALIRAFNRAHKDVVERLSGVDFATISPGEVSATWERTEREILLETNRKHDWEHRKSPWFRLYYHF
Ga0207693_1118688323300025915Corn, Switchgrass And Miscanthus RhizosphereMEAQEPSTLVRAFTRAHKDVVERLSGVDFSPISPAEVNALWEKTEREILLETNRKHDWEHRNSPWFRLYYHFH
Ga0207649_1080783423300025920Corn RhizosphereRGSLANTVETQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC
Ga0207652_1007096813300025921Corn RhizosphereVETQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC
Ga0207694_1048039923300025924Corn RhizosphereVEAQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC
Ga0207690_1132478813300025932Corn RhizosphereVAQQPSRLIRAFNRAHIDAVERLSGVDFALISPGAVSAMWERTEREILLETNRKHDWEHRKSPWFRLYYHFY
Ga0207709_1032936913300025935Miscanthus RhizospherePILWQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC
Ga0207709_1150530423300025935Miscanthus RhizosphereMEAQEPSTLVRAFTRAHKDVVERLSGVDFSPISPAEVNALWEKTEREILLETNRKHDWEH
Ga0207689_1005867213300025942Miscanthus RhizosphereRGSLANTVEAQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC
Ga0207689_1079738613300025942Miscanthus RhizosphereGSPANMEAQEPSTLVRAFTRAHKDVVERLSGVDFSPISPAEVNALWEKTEREILLETNRKHDWEHRNSPWFRLYYHFY
Ga0207668_1089617223300025972Switchgrass RhizosphereVEAQEPWALIRAFNRAHKDVVERLSGVDFATISPGEVSATWERTEREILLETNRKHDWEHRKSPWFRLYYHFY
Ga0207640_1119333213300025981Corn RhizosphereNTVETQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC
Ga0207676_1224719723300026095Switchgrass RhizosphereLANTVEAQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC
Ga0207675_10013139123300026118Switchgrass RhizosphereGSLANTVETQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC
Ga0209890_1006922213300026291SoilLEFLPGTSGGAGSKFRIGNIRIFNIVEQQESSRLIRAFQQAHKDVVNRLSGVDFSPMSADQAEAEWERTERNVLQETNRKHDWEHRDSPWFRLYYHFY
Ga0257172_101173613300026482SoilVVVLHSKIVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREVLLETNRKHDWEHRKSPWFRLYYHFY
Ga0209421_104902913300027432Forest SoilVEQQESSRLIRAFQLAHKDVVNRLSGVDFSPMSAAQADAEWERTERNVLLETNRKHDWEHRDSPWFRLYYHFY
Ga0209217_122125213300027651Forest SoilMVALHSKIMKVRVFNPVEAQEPSPLIRAFKRAHKDVIGRLSGVDFAPISAEGATAKWERMEREILLETNRKHDWEHRNSPWFRLYYHFY
Ga0209009_108247723300027667Forest SoilVEAQEPSALIRAFNRAHKDVVERLSGVDFASISPEAASATWERTEQEILLETNRKHDWEHRKSPWFRLYYDFF
Ga0209180_10000906153300027846Vadose Zone SoilMVVLHSKTVKIWVFNTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREILLETNRKHDWEHRKSPWFRLYYHFY
Ga0209488_1041065823300027903Vadose Zone SoilMVVLHSKTVKIWVFKTVEAQRSSTLIRAFKRAHKDVIERLSGVDFAGAEEASAKWERMEREILLETNRKHDWEHRKSPWFRLYYHFY
Ga0209488_1091549523300027903Vadose Zone SoilMEAHQPSPLIRAFNRAHKDVVERLSGVDFSPISPAEASAMWDSTEREILLETNRKHDWEHRKSPWFRLYYDFY
Ga0209583_1067604613300027910WatershedsMEAQEPSPLIRAFTRAHKDVVERLSGVDFSPISPAEATAMFEKTEQTILLETNRKHDWEHRNSPWFRLYYDFY
Ga0209069_1088147423300027915WatershedsVEEPETSTLIRAFKRAHKDVVERLSGVDFAPMSAAEADAKWESVEQDILLQTNRKHDWEHRNSPWFRLYYHYF
Ga0268264_1163278523300028381Switchgrass RhizosphereTVEAQEPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYHFC
Ga0307305_1043964513300028807SoilTGEACIVTVSAPGSFRAGRMIVHMAGGTELFTVEEPEASPLIRAFKRAHKDVVERPSGVDFAPMSVDEANAKWESVERDILLQTNRKHDWEHRNSPWFRLYYDYF
Ga0307312_1016110923300028828SoilVHMAGGTELLTVEEPEASPLIRAFKRAHKDVVERLSGVDFAPMSVDEANAKWESVERDILLQTNRKHDWEHRNSPWFRLYYDYF
Ga0307308_1025543223300028884SoilMAGGTELFTVEEPEASPLIRAFKRAHKDVVERLSGVDFAPMSAGEANAKWESVERDILLQTNRKHDWEHRNSPWFRLYYDYF
Ga0308309_1081580223300028906SoilPSLLIRAFTRAHKDVVNHLSGIDFAPMSPAEANAAWERSELEVLRETNRRHDWEHRHSPWFRLYYHFY
Ga0222749_1007356813300029636SoilVELRKPSLLIRAFTRAHKDVVNHLSGIDFAPMSPAEANAAWERSELEVLRETNRRHDWEHRESPWF
Ga0307471_10220761623300032180Hardwood Forest SoilVEAQEPWALIRAFNRAHKDVVERLSGVDFATISPGEVSATWERTEREILLETNRKHDWEHRKSP
Ga0307471_10253568313300032180Hardwood Forest SoilMEAQEPSTLVRAFTRAHKDVVERLSGVDFSPISPAEVNALWEKTEREILLETNRKHDWEHRNS
Ga0335069_1063890023300032893SoilMEAQEPSPLIRAFNRAHKDVVERLSGVDFSTIPPAEAGAVWEKTEQAILLETNRKHDWEHRKSPWFRLYYDFY
Ga0310811_1053386523300033475SoilVEAQKPSVLIRAFNRAHKDVVERLSGVDFAPIPPGDILATWEKTEREILLETNRKHDWEHRNSPWFRLYYH

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.