NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F090724

Metagenome Family F090724

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F090724
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 149 residues
Representative Sequence MEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKEN
Number of Associated Samples 105
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.13 %
% of genes near scaffold ends (potentially truncated) 97.22 %
% of genes from short scaffolds (< 2000 bps) 90.74 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.222 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(10.185 % of family members)
Environment Ontology (ENVO) Unclassified
(38.889 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.074 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 42.69%    Coil/Unstructured: 57.31%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF01207Dus 11.11
PF01904DUF72 6.48
PF00403HMA 5.56
PF00155Aminotran_1_2 4.63
PF13411MerR_1 3.70
PF13483Lactamase_B_3 2.78
PF02012BNR 0.93
PF03320FBPase_glpX 0.93
PF13519VWA_2 0.93
PF02545Maf 0.93
PF02423OCD_Mu_crystall 0.93
PF00890FAD_binding_2 0.93
PF03447NAD_binding_3 0.93
PF01624MutS_I 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 11.11
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 6.48
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 5.56
COG2608Copper chaperone CopZInorganic ion transport and metabolism [P] 5.56
COG0249DNA mismatch repair ATPase MutSReplication, recombination and repair [L] 0.93
COG04247-methyl-GTP pyrophosphatase and related NTP pyrophosphatases, Maf/HAM1 superfamilySecondary metabolites biosynthesis, transport and catabolism [Q] 0.93
COG1494Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related proteinCarbohydrate transport and metabolism [G] 0.93
COG2423Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin familyAmino acid transport and metabolism [E] 0.93


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.07 %
UnclassifiedrootN/A0.93 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886011|MRS1b_contig_7508541All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10041211All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1221Open in IMG/M
3300001431|F14TB_105333156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus cereus group → Bacillus cereus611Open in IMG/M
3300004013|Ga0055465_10153405All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium731Open in IMG/M
3300004114|Ga0062593_102318000All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium604Open in IMG/M
3300004114|Ga0062593_102368785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa598Open in IMG/M
3300004463|Ga0063356_102991126All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300004479|Ga0062595_100987560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa721Open in IMG/M
3300004643|Ga0062591_100105706All Organisms → cellular organisms → Bacteria1835Open in IMG/M
3300005093|Ga0062594_101302702All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus729Open in IMG/M
3300005289|Ga0065704_10281825All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300005289|Ga0065704_10454836All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium702Open in IMG/M
3300005290|Ga0065712_10013397All Organisms → cellular organisms → Bacteria1637Open in IMG/M
3300005335|Ga0070666_10227550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1316Open in IMG/M
3300005336|Ga0070680_100117941All Organisms → cellular organisms → Bacteria2213Open in IMG/M
3300005341|Ga0070691_10453752All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium732Open in IMG/M
3300005366|Ga0070659_100165680All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1808Open in IMG/M
3300005437|Ga0070710_11322852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus536Open in IMG/M
3300005441|Ga0070700_100252616All Organisms → cellular organisms → Bacteria1265Open in IMG/M
3300005459|Ga0068867_101542626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus619Open in IMG/M
3300005468|Ga0070707_101023804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa791Open in IMG/M
3300005577|Ga0068857_100574844All Organisms → cellular organisms → Bacteria1063Open in IMG/M
3300005843|Ga0068860_102562801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa529Open in IMG/M
3300005844|Ga0068862_101501643All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium679Open in IMG/M
3300006058|Ga0075432_10236025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Thermoactinomycetaceae → Melghirimyces → Melghirimyces thermohalophilus737Open in IMG/M
3300006175|Ga0070712_100124939All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae1942Open in IMG/M
3300006806|Ga0079220_12041922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus512Open in IMG/M
3300006847|Ga0075431_100026501All Organisms → cellular organisms → Bacteria → Proteobacteria5946Open in IMG/M
3300006852|Ga0075433_10007143All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria8842Open in IMG/M
3300006854|Ga0075425_100339529All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1729Open in IMG/M
3300006865|Ga0073934_10070260All Organisms → cellular organisms → Bacteria2850Open in IMG/M
3300006871|Ga0075434_100802058All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300006880|Ga0075429_101747091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa540Open in IMG/M
3300006894|Ga0079215_10510447All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium753Open in IMG/M
3300006904|Ga0075424_101989298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus613Open in IMG/M
3300009087|Ga0105107_10274595All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1176Open in IMG/M
3300009101|Ga0105247_11669233All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium526Open in IMG/M
3300009147|Ga0114129_10109798All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira3807Open in IMG/M
3300009156|Ga0111538_12066551All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium716Open in IMG/M
3300009162|Ga0075423_11115717All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium840Open in IMG/M
3300010047|Ga0126382_10125804All Organisms → cellular organisms → Archaea → Euryarchaeota1710Open in IMG/M
3300010403|Ga0134123_12599925All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium573Open in IMG/M
3300011431|Ga0137438_1056645All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300011437|Ga0137429_1256871All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium541Open in IMG/M
3300011444|Ga0137463_1080391All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1222Open in IMG/M
3300012164|Ga0137352_1052158All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium803Open in IMG/M
3300012203|Ga0137399_11304631All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium610Open in IMG/M
3300012208|Ga0137376_10275178All Organisms → cellular organisms → Bacteria1461Open in IMG/M
3300012349|Ga0137387_10183283All Organisms → cellular organisms → Bacteria1500Open in IMG/M
3300012355|Ga0137369_11063309All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium532Open in IMG/M
3300012489|Ga0157349_1029781All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium564Open in IMG/M
3300012519|Ga0157352_1016874All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium844Open in IMG/M
3300012582|Ga0137358_10654586All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium703Open in IMG/M
3300012915|Ga0157302_10047890All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1197Open in IMG/M
3300012971|Ga0126369_10111582All Organisms → cellular organisms → Bacteria2499Open in IMG/M
3300013297|Ga0157378_10100099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes2645Open in IMG/M
3300014314|Ga0075316_1084257All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium737Open in IMG/M
3300014326|Ga0157380_11361185All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300014864|Ga0180068_1047892All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Natrialbales → Natrialbaceae → Haloterrigena → Haloterrigena turkmenica698Open in IMG/M
3300014865|Ga0180078_1037637All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium783Open in IMG/M
3300014873|Ga0180066_1024875All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1118Open in IMG/M
3300014877|Ga0180074_1048908All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium894Open in IMG/M
3300014883|Ga0180086_1192519All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium529Open in IMG/M
3300014884|Ga0180104_1127394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus beijingensis739Open in IMG/M
3300015262|Ga0182007_10343627All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium558Open in IMG/M
3300017997|Ga0184610_1297212All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → Deferrisoma → Deferrisoma camini532Open in IMG/M
3300018052|Ga0184638_1049634All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1527Open in IMG/M
3300018061|Ga0184619_10456971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium569Open in IMG/M
3300018066|Ga0184617_1181956All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium624Open in IMG/M
3300018070|Ga0184631_10325609All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium639Open in IMG/M
3300018432|Ga0190275_13455506All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Nitritalea → Nitritalea halalkaliphila511Open in IMG/M
3300020010|Ga0193749_1069074All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium661Open in IMG/M
3300021078|Ga0210381_10336448All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium550Open in IMG/M
3300022209|Ga0224497_10012252All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4090Open in IMG/M
3300025795|Ga0210114_1016552All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1602Open in IMG/M
3300025917|Ga0207660_10659687All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium853Open in IMG/M
3300025917|Ga0207660_11177791All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium624Open in IMG/M
3300025930|Ga0207701_11448468All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium558Open in IMG/M
3300025931|Ga0207644_10152005All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1792Open in IMG/M
3300025932|Ga0207690_10067027All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira2461Open in IMG/M
3300025933|Ga0207706_10987982All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium708Open in IMG/M
3300025935|Ga0207709_10446141All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium999Open in IMG/M
3300025938|Ga0207704_11014195All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium702Open in IMG/M
3300025941|Ga0207711_10365763All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1337Open in IMG/M
3300025981|Ga0207640_11012962All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium731Open in IMG/M
3300026116|Ga0207674_11388952All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium672Open in IMG/M
3300026304|Ga0209240_1284576All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium511Open in IMG/M
3300026535|Ga0256867_10254693All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium630Open in IMG/M
3300027252|Ga0209973_1012570All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1032Open in IMG/M
3300027717|Ga0209998_10018286All Organisms → cellular organisms → Bacteria1487Open in IMG/M
3300027787|Ga0209074_10015283All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira1986Open in IMG/M
3300027818|Ga0209706_10321575All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium730Open in IMG/M
3300027907|Ga0207428_10716372All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium715Open in IMG/M
3300028802|Ga0307503_10238963All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium882Open in IMG/M
3300031152|Ga0307501_10210837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. AFS075034560Open in IMG/M
3300031170|Ga0307498_10219372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. AFS075034674Open in IMG/M
3300031228|Ga0299914_11354216All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium562Open in IMG/M
3300031720|Ga0307469_12361658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → unclassified Bacillus (in: Bacteria) → Bacillus sp. AFS075034519Open in IMG/M
3300031740|Ga0307468_102093327All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium545Open in IMG/M
3300032075|Ga0310890_10235057All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1280Open in IMG/M
3300033407|Ga0214472_10556658All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1058Open in IMG/M
3300033417|Ga0214471_10384661All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1133Open in IMG/M
3300033419|Ga0316601_101819292All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium614Open in IMG/M
3300033475|Ga0310811_10330181All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1729Open in IMG/M
3300033815|Ga0364946_084299All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium692Open in IMG/M
3300034147|Ga0364925_0108942All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium987Open in IMG/M
3300034149|Ga0364929_0359402All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium506Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere10.19%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil9.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.41%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.63%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.63%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.63%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil2.78%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.78%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.78%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.78%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.78%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.85%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.85%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil1.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.85%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.93%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.93%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.93%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.93%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.93%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.93%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.93%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.93%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886011Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011431Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2EnvironmentalOpen in IMG/M
3300011437Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012164Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012489Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610EnvironmentalOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014314Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014864Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10DEnvironmentalOpen in IMG/M
3300014865Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10DEnvironmentalOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300014877Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10DEnvironmentalOpen in IMG/M
3300014883Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10DEnvironmentalOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018070Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300022209Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_13EnvironmentalOpen in IMG/M
3300025795Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300027252Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031228Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
MRS1b_0336.000015802162886011Miscanthus RhizosphereMTVNENRDQALHLATHSGWYRYEPRGADWIQADRALTYWQMSCLQVNPEDPKHVYIGTEHSGMFISSNGGEDWTRADPNVPCLTMSSMLALPGKLLAGTMPAALYVTANGGGWKELKGVRQGSIGGSFPPNPDFPPRTRVLKKSHQNGGRLFAGIEVAGILVSD
AF_2010_repII_A1DRAFT_1004121123300000597Forest SoilMTTNGVDKNALHLATHSGWYRFEQRGEEWVQNDRALTYWQMSCIQVDPDDPKQLYIGTEHSGMFVTKDGGKDWTRANPNVPCLAMSSMLALQGKLLVGTMPAALYVASNGRNWQEIKGFGKVPSAELSHPIQTLRRALVC*
F14TB_10533315613300001431SoilMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQRAAGGTFPPNPDLPARTRVLHKENAK
Ga0055465_1015340513300004013Natural And Restored WetlandsMTSNGDKALHLATHSGWYRFERHGEEWTQADRALTFWQMSCLQVDPDNPKRVYIGTERSGMFVTDDGGKEWTRADPNVPCLAMSAMLALPGKLLVGTMPAALYVNSKTGWHEIKGVREGAVGGTFPPNPDFPARTRVLTKESKPGGRLFAGIEVA
Ga0062593_10231800013300004114SoilMTVNENRDQALHLATHSGWYRYEPRGADWIQADRALTYWQMSCLQVNPEDPKHVYIGTEHSGMFISRNGGADWTRADPNVPCLTMSSMLALPGKLLAGTMPAALYVTANGGGWEELKGVRQGSIGGGFPPNPDF
Ga0062593_10236878513300004114SoilMAANEKNALHLATHSGWYRYERRGENWEQSDRALTFWQMSCIQVDPKDAKHVYAGTEHSGMFVSKDGGKDWKRAEPNVPILEMSAMLALPEKILVGTRPAALYMHKDGSSWQEIKGIRQGAFGGTFPPNPDLAPRTRVLTKEKVSGNR
Ga0063356_10299112613300004463Arabidopsis Thaliana RhizosphereMTVNENRDQALHLATHSGWYRYELRGADWIQADRALTYWQMSCLQVNPEDPKHVYIGTEHSGMFISRNGGADWTRADPNVPCLTMSSMLALPGKLLAGTMPAALYVTANGGGWEELKGVRQGSIGGSFPPNPDFPPRTRVLKKSHQN
Ga0062595_10098756013300004479SoilMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTERSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENTKGGRL
Ga0062591_10010570623300004643SoilMTVNENRDQALHLATHSGWYRYELRGADWIQADRALTYWQMSCLQVNPEDPKHVYIGTEHSGMFISRNGGADWTRADPNVPCLTMSSMLALPGKLLAGTMPAALYVTANGGGWEELKGVRQGSIGGSFPPNPDFPPRTRVLKKSHQNGG
Ga0062383_1006734723300004778Wetland SedimentMAANEKNALHLATHSGWYRYDRRGENWQQTDRALTFWQMSCIQVDPDDAKHVYAGTEHSGMFVGKDGGKDWQRAEPNVPILEMSAMLALPGKVLVGTRPAALYMKNNGSGWQEIKGIRQG
Ga0062594_10130270213300005093SoilMANNGTDALHLATHSGWYRFERRGEEYAQADRALTFWQMSCIQVDPDNPKRVYIGTEHSGMFVTDDGGKEWTRANPNVPCLTMSAMLALSGKLLVGTMPAALYCKAESGSWQELKGVRQGSVGG
Ga0065704_1028182513300005289Switchgrass RhizosphereMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTERSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKEN
Ga0065704_1045483613300005289Switchgrass RhizosphereMTVNENRDQALHLATHSGWYRYEPRGADWIQADRALTYWQMSCLQVNPEDPKHVYIGTEHSGMFISSNGGEDWTRADPNVPCLTMSSMLALPGKLLAGTMPAALYVTANGGGWKELKGVRQGSIGGSFPPNPDFPPRTRVLKKSHQNGGRLFAGIEVA
Ga0065712_1001339723300005290Miscanthus RhizosphereMALTYDRTPTYVRIIRAIGRHFMTANGNADQALHLATHSGWYRFEPRGTEWIQADRALTYWQMSCIQVDPQDPERVYIGTEHSGMFVSRNGGADWSRANPNVPCLTMSSMLALPGKLLAGTMPAALYVKTNGGQWQELPGVRQGSSGGSFPPNPDFPPRTRVLKKSHENGGRLFAGIEVAGILVSDD
Ga0070666_1022755013300005335Switchgrass RhizosphereMKANGNGDKALHLATHSGWYRFEPRGTEWIQADRALTYWQMSCIQVDPEDPNHVYIGTEHSGMFVSRNGGADWSRANPNVPCLTMSSMLALPGKLLAGTMPAALYVKTNGGQWQELPGVRQGSSGGSF
Ga0070680_10011794113300005336Corn RhizosphereMENREAEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCVQVDPDNPKRVYIGTQHSGMFVTNDGGKDWTRANPNVPCLAMSSMLALSGKLLVGTMPAALYFTAEGGKWQELKGVRAGAAGGSFPPNPDFPPRTRVITREKNN
Ga0070691_1045375223300005341Corn, Switchgrass And Miscanthus RhizosphereMANNGTDALHLATHSGWYRFERRGEEYAQADRALTFWQMSCIQVDPDNPKRVYIGTEHSGMFVTDDGGKEWTRANPNVPCLTMSAMLALSGKLLVGTMPAALYCKPASGSWQELKGVRQGSVGGSFPPNPDFPARTRVLTKEKGNSGRLFA
Ga0070659_10016568013300005366Corn RhizosphereMTVNENRDQALHLATHSGWYRYEPRGADWIQADRALTYWQMSCLQVNPEDPKHVYIGTEHSGMFISSNGGEDWTRADPNVPCLTMSSMLALPGKLLAGTMPAALYVTANGGGWKELKGVRQGSIGGSF
Ga0070710_1132285213300005437Corn, Switchgrass And Miscanthus RhizosphereMASNGKNALHLATHSGWYRFERRAEDWVQADRALTYWQMSCVQVDPEDPKRVYIGTEHSGMFVTNDGGKDWIRANPNVPCLTMSSMLALPGKLLVGTMPAALYYTNDGSGWQELKGVRQGAAGGTFPPNPD
Ga0070700_10025261623300005441Corn, Switchgrass And Miscanthus RhizosphereMANNGTDALHLATHSGWYRFERRGEEYAQADRALTFWQMSCIQVDPDNPKRVYIGTEHSGMFVTDDGGKDWSRANPNVPCLTMSAMLALSGKLLVGTMPAALYCKAESGSWQELKGVRQGSVGGSFPPNPDFP
Ga0068867_10154262613300005459Miscanthus RhizosphereMANNGTDALHLATHSGWYRFERRGEEYAQADRALTFWQMSCIQVDPDNPKRVYIGTEHSGMFVTDDGGKDWSRANPNVPCLTMSAMLALSGKLLVGTMPAALYCKPASGSWQELKGVRQGSVGGSFPPNPDFPARTRVLIKEKGNSG
Ga0070707_10102380413300005468Corn, Switchgrass And Miscanthus RhizosphereMTTNGINKNALHLATHSGWYRFEQQGEEWVQIDRALTYWQMSCLQVDPDDPKHVFIGTEHSGMFVTKDGGKEWTRANPNVPCLAMASMLALPGKLLVGTMPAALYMISNGGGWQEIKGIRQGAIGGTFPPNPDLAPRTRVLTKE
Ga0068857_10057484423300005577Corn RhizosphereMANNGTDALHLATHSGWYRFERRGEEYAQADRALTFWQMSCIQVDPDNPKRVYIGTEHSGMFVTDDGGKEWTRANPNVPCLTMSAMLALSGKLLVGTMPAALYCKAESGSWQELEGVRQGSVGGSFPPNPDFPARTRVLIKEKGDSGRLFAGIEVAGILVSDDD
Ga0068860_10256280113300005843Switchgrass RhizosphereMEAQEKNVLHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTERSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKILVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPN
Ga0068862_10150164313300005844Switchgrass RhizosphereMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTERSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENAKGGRLFAGIEVAGILVSDDEGQ
Ga0075432_1023602513300006058Populus RhizosphereMEAHGKEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAVGGTFPPNPDFPARTRVLTKENADGGRLFAGIEVAGILVSDNEGQSWQAVNDGLTDPDIHQIL
Ga0070712_10012493933300006175Corn, Switchgrass And Miscanthus RhizosphereMTVNENRDQALHLATHSGWYRYELRGADWIQADRALTYWQMSCLQVNPEDPKHVYIGTEHSGMFISRNGGADWTRADPNVPCLTMSSMLALPGKLLAGTMPAALYVTANGGGWEELKGVRQGSIGGSFPPNPDFPPRTRVLKKS
Ga0079220_1204192213300006806Agricultural SoilIKQGPRGCFMTANGKSERALHLATHSGWYRFEPRGEDWIQADRALTYWQMSCIQVDPEDPKRIYIGTEHSGLFVSHNGGADWTRANPNVPCLTMSSMLALPGRLLAGTMPAALYTAANGGGWEELKGVRHGSIGGSFPPNPDFPPRARVLKKSQQNGGRLFAGIEVAGIL
Ga0075431_10002650113300006847Populus RhizosphereMEAHGKEKNALHLATHSGWYRFERRGENWEQADRALTYWQMSCIQVDPDNSGRVYIGTEHSGMFVTDDGGKDWARANPNVPCLTMSSMLALSGKLFVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTR
Ga0075433_1000714373300006852Populus RhizosphereMATDEKANDGLHLATHSGWYRFERRGEDWAQADRALTFWQMSCLQVDPDDPEKVYIGTEHSGMFVTRDGGKEWTRANPNVPCLTMSSILALSGKLLVGTMPAALYSTSEGGGWQELKGVREGATGGTFPPNPDFAPRTRVLTAEKKPVGRLYAG
Ga0075425_10033952923300006854Populus RhizosphereMTANGKSERALHLATHSGWYRFEPRGEDWIQADRALTYWQMSCIQVDPEDPKRIYIGTEHSGLFVSHNGGADWTRANPNVPCLTMSSMLALPGRLLAGTMPAALYTAANGGGWEELKGVRQGSIGGSFPPNPDFPPRTRVLKKS
Ga0073934_1007026043300006865Hot Spring SedimentMATNGNNALHLATHSGWYRFERQGENWGQADRALTFWQMSCLQVDPENPKRVYIGTEHSGMFVTDNGGEEWRRAIPNVPCLAISSMLALPGKLLVGTMPAALYLKPGNGGWQELKGVRQGAVGGTFP
Ga0075434_10080205813300006871Populus RhizosphereMASNGKNALHLATHSGWYRFERRAEDWVQADRALTYWQMSCVQVDPEDPKRVYIGTEHSGMFVTNDGGKDWIRANPNVPCLTMSSMLALPGKLLVGTMPAALYYNNDGSGWQELKGVRQGAAGGTFPPNPDFPARTR
Ga0075429_10174709113300006880Populus RhizosphereMEAHGKEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYSTSEGGSWQELKGVRQGAVGGTFPPNPD
Ga0079215_1051044723300006894Agricultural SoilMATNREALHLATHSGWYRYERSGEDWRPTDRALTFWQMSCIQVDPESPERMYIGTERSGMFVSDDGGKEWMRANPNVPCLAMSTMLALPGRLLVGTTPAALYVKADMRWQEMKGVRAGAVGG
Ga0075424_10198929813300006904Populus RhizosphereMENREAEKNALHLATHSGWYRFERSGENWDRADRALTYWQMSCIQVDPDDPKRVYIGTEHSGMFVSNDGGKEWTRANPNVPCLAMSSMLALSGRLLVGTMPAALYFTAEGGKWQELKGVRAGSAGGSFPPNPDFPPRTRVITQEKNNGERLFAGIEVAGILVSDDDGQNWQAANDGLTDPDI
Ga0105107_1027459513300009087Freshwater SedimentMAANETTALHLATHSGWYRYERRGENWEPTDRALTFWQMSCIQVDPNDAKHVYAGTEHSGMFVSKDGGKDWQRAEPNVPILEMSAMLALPEKILVGTRPAALYMHKDGSGWQEIKGIRQGAFGGTFPPNPDLAPRTRVLTMEKASGSRLYAGIE
Ga0105247_1166923313300009101Switchgrass RhizosphereMTVNENRDQALHLATHSGWYRYEPRGADWIQADRALTYWQMSCLQVNPEDPKHVYIGTEHSGMFISSNGGEDWTRADPNVPCLTMSSMLALPGTLLAGTMPAALYVTANGRGWKELKGVRQGSIGGSFPPNPDFPPRTRVLKKSHQN
Ga0114129_1010979813300009147Populus RhizosphereMAANGKSEQALHLATHSGWYRFEPRGENWIQADRALTYWQMSCIQVDPVDPQRVYIGTEHSGMFVTHNGGADWTRANPNVPCLTMSSMLALPGKLLAGTMPAALYAAANGGGWEELKGVRQGSMGGSFPPNPD
Ga0111538_1206655113300009156Populus RhizosphereMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTERSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGQLLVGTMPAALYFTAEGGGWQELKGVRLGAAGGTFPPNPDLPARTRVLTKENA
Ga0075423_1111571713300009162Populus RhizosphereMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAVGGTFPPNPDFPARTRVLTKENADGGRLFAGIEVAGILVSDNEGQSWQAVNDGLTDPDIHQILP
Ga0126382_1012580433300010047Tropical Forest SoilMTNNRVEKTALHLATHSGWYRYERRGNEWIQVDRALTYWQMSCIQVDPDDPACVYIGTERSGMFVSKTGGKEWLRANPNVPCLAMSSMLALSGKLLVGTMPAALYAKPNAGAWHELNGVRQGATGGCFPPNPDFPARTRVLTREGQNGGRLFAGIEVAG
Ga0134123_1259992513300010403Terrestrial SoilMAANGTAKAIHLATHSGWYRFEQQGEDWRESDRALTFWQTSCIQVDPANPQRVYVGTEHSGMFVSDDAGKDWQRAEPNVPRLEMSAMLALPGKLLVGTRPAALYMRGESGPWQEIKGVRDGALGGTFPPNPDLAPRTRVLTQESSGKRFFAGIEVGGILVT
Ga0137438_105664513300011431SoilMAENDKHALHLATHSGWYRYERRGQEWQQVDRALTYWQMSCIQVDPDDAKHVYIGTEHSGMFVTKDGGKDWTRANPNVPCLTMSSMLAYSGKLMVGTMPAALYVSADGGGWQEVKGVRQGAVGGTFPPNPDFAPRTR
Ga0137429_125687113300011437SoilMAGNEKNALHLATHSGWYRFDRQGEDWVQTDRALTFWQMSCIQVDPDNPKKVYAGTEHSGMFVTNDGGKDWRRAEPNVPILEMSAMLALSGKLLVGTRPAALYVNSQGKGWQEIKGVRQGAFGGTFPPNPDLAPRTRVITQENQAN
Ga0137463_108039123300011444SoilMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVNPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENTKGGRLFAGIEVAGILVSDD
Ga0137352_105215823300012164SoilMATNGNNALHLATHSGWYRFDRQGEHWAQADRALTFWQMSCIQVDPENPQRVYIGTEHSGMFVTDNGGKEWTRANPNVPCLAMSSMLALPGKLLVGTMPSALYFKPKDGGWQELKGVRQGSVGGTFPPNPDFPARTRVLA
Ga0137399_1130463123300012203Vadose Zone SoilMASNGKNALHLATHSGWYRFERRAEDWVQADRALTYWQMSCVQVDPEDPKRVYIGTEHSGMFVTNDGGKDWIRANPNVPCLTMSSMLALPGKLLVGTMPAALYYTNDGSGWQELKGVRQGAAGGTFPPNPDFPARTRVLTNEK
Ga0137376_1027517833300012208Vadose Zone SoilMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKEN
Ga0137387_1018328333300012349Vadose Zone SoilMASNGKNALHLATHSGWYRFERRAEDWVQADRALTYWQMSCVQVDPEDPKRVYIGTEHSGMFVTNDGGKDWIRANPNVPCLTMSSMLALPGKLLVGTMPAALYYTNDGSGWQELKGVRQGAAGGTFPPN
Ga0137369_1106330913300012355Vadose Zone SoilMEAHGKEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNFKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAVGGTF
Ga0157349_102978113300012489Unplanted SoilMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSRRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPN
Ga0157352_101687413300012519Unplanted SoilMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKHVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGQLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENAKGGRLFAGIEVAGI
Ga0137358_1065458613300012582Vadose Zone SoilMASNGKNALHLATHSGWYRFERRAEDWVQVDRALTYWQMSCVQVDPDDPKRVYIGTEHSGMFVTNDGGKDWIRANPNVPCLTLSSMLALPGKLLVGTMPAALYYTNDGSGWQELKGVRHGAAGGTF
Ga0157302_1004789023300012915SoilMTANGNADQALHLATHSGWYRFEPRGTEWIQADRALTYWQMSCIQVDPQDPERVYIGTEHSGMFVSRNGGADWSRANPNVPCLTMSSMLALPGKLLAGTMPAALYVKTNGGQWQELPGVRQGSSGGSFPPNPDFPPRTRVLKKSHENGGRLFAGIEVAGILVSDDEG
Ga0126369_1011158233300012971Tropical Forest SoilMATNGVNKNALHLATHSGWYRFEQRGEEWVQIDRALTYWQMSCIQVDPDDPKQLYIGTEHSGMFLTKDGGKDWTRANPNVPCLAMSSMLALQGKLLVGTMPAALYVASNGGNWQEIKGIRQGAIGGTFP
Ga0157378_1010009933300013297Miscanthus RhizosphereMEAQEKTVLHLATHSGWYRFERRGETWEQTDRALTYWQMSCIQVDPDNSKRVYIGTERSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGQLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENAKCGRLFAGIEVAGI
Ga0075316_108425713300014314Natural And Restored WetlandsMTMDETRDQALHLATHSGWYRYERRGEDWIQAGRALTFWQMSCLQVDPEDPRRVYIGTEHSGMFLTNDGGKDWMRAKPNVPCLTMSSMLALPGKLLVGTMPAALYYKTDGGGWQEVKGVREGAAGGVFPPNPDLP
Ga0157380_1136118523300014326Switchgrass RhizosphereMTVNENRDQALHLATHSGWYRFEPRGTEWIQADRALTYWQMSCIQVDPQDPQRVYIGTEHSGMFVSRNGGADWSRANPNVPCLTMSSMLALPGKLLAGTMPAALYVKTNGGQWQELPGVRQGSSGGSFPPNPDFPPRTRVLKKSHENGGRLFAGIEVAGILVSDDEGQSWAPANDGLT
Ga0180068_104789213300014864SoilMANNGNDALHLATHSGWYRFERKGEDWAQTERALTFWQMSCIQVDPENPKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYCTTGNGGWQELKGVRQGAIGGTFPPNPEFPARTRVLSREKESGGRLFAGIEVAGILVSDDDGQSWQAANDGLTDPDI
Ga0180078_103763723300014865SoilMATNGNNALHLATHSGWYRFDRRGENWAQTDRALTFWQMSCIQVDPEIPQRVYIGTEHSGMFVTDNGGKEWTRANPNVPCLAMSSMLALPGKLLVGTMPSALYFKPKDGGWQELKGVRQGSVGGTFPPNPDFPARTRVLTREHKPGGRFFAGIEVAG
Ga0180066_102487523300014873SoilMATNGKYALHLATHSGWYRFDRQGENWAQADRALTFWQMSCIQVDPENPQRVYIGTEHSGMFVTDNGGKEWTRANPNVPCLTMSSMLALPGKLLVGTMPAALYFKPEGGGWQELKGVRQGAVGGTFPPNPDFPARTRVLTRENKPNGRFFAGIEVAGILVSD
Ga0180074_104890813300014877SoilMATNGNNALHLATHSGWYRFDRQGENWDQADRALTFWQMSCIQVDPENPQRVYIGTEHSGMFVTDNGGKEWTRANPNVPCLTMSSMLALPGKLLVGTMPAALYFKPEDGGWQELKGVRQGAVGGTFPPNPDFPARTRVLTRENKP
Ga0180086_119251913300014883SoilMATNGNNALHLATHSGWYRFDRQGEHWAQADRALTFWQMSCIQVDPENPQRVYIGTEHSGMFVTDNGGKDWTRANPNVPCLAMSSMLALPGKLLVGTMPSALYFKPKDGGWQELKGVRQGSVGGTFPPNPDFPARTRVLTKENKPRGRLFAGIEGAGI
Ga0180104_112739413300014884SoilMATNGNNALHLATHSGWYRFDRRGENWAQTDRALTFWQMSCIQVDPEIPQRVYIGTEHSGMFVTDNGGKEWTRANPNVPCLAMSSMLALPGKLLVGTMPSALYFKPKDGGWQELKGVRQGSVGGTFPPNPDFPARTRVLTR
Ga0182007_1034362713300015262RhizosphereMTANGNADQALHLATHSGWYRFEPRGTEWIQADRALTYWQMSCIQVDPQDPERVYIGTEHSGMFVSRNGGADWSRANPNVPCLTMSSMLALPGKLLAGTMPAALYVKTNGGQWQELPGVRQGSSGGSFPPNPDFLPRTRVLKKSHENGGRLFAGIEVAGILVSDDE
Ga0184610_129721213300017997Groundwater SedimentMAADGKANDALHLATHSGWYRFEPRGEDWVQVDRALTFWQMSCIQVDPDDPKRVYVGTEHSGMFVTRDGGKDWTRANPNVPCLTMSSILALPGRLLVGTMPAALYATSESSGWQEIKGVRQGAIGGTFPPNPDFAPRTRVLAVEKKPGGRLYAGIEVGGILVSDDD
Ga0184638_104963433300018052Groundwater SedimentMATNGNNALHLATHSGWYRFDRQGENWAQADRALTFWQMSCIQVDPENPQRVYIGTEHSGMFVTDNGGKEWTRANPNVPCLAMSSMLALPGKLLVGTMPSALYFKPEDGGWQELKGVRQGSVGGTFPPNPDFPAR
Ga0184619_1045697113300018061Groundwater SedimentMASNGKNALHLATHSGWYRFERRAEDWVQADRALTYWQMSCVQVDPEDPKRVYIGTEHSGMFVTNDGGKDWIRANPNVPCLTMSSMLALPGKLLVGTMPAALYYTNDGSGWQELKGVRQGAAGGTFPPNPDFPARTRVLTNEKTNGGRLFAGIEVAGILVSD
Ga0184617_118195613300018066Groundwater SedimentMENNGTDALHLATHSGWYRFERRGEDWIQTNRALTFWQMSCIQVDPDNPKRVYIGTEHSGMFVTDDGGKEWTRANPNVPCLTMSAMLALSGKLLVGTMPAALYCKAESGGWQELKGVRQGSVGGSFPPNPDFPARTRVLSKERSNGGRLFAG
Ga0184631_1032560913300018070Groundwater SedimentMATNGNNALHLATHSGWYRFDRLGENWAQADRALTFWQMSCIQVDPENPQRVYIGTEHSGMFVTDNGGKEWTRANPNVPCLTMSSMLALPGKLLVGTMPAALYFKPDGSGWQELKGVRQGAVGGTFPPNPDFPARTRVLTRENKPSGRFFAGIEVAGILVSDDDGQTWASANDGLTDPDMHQIL
Ga0190275_1345550613300018432SoilMATNCEALHLATHSGWYRYDRTGEDWRPTDRALTFWQMSCIQVDPKNPERVYIGTERSGMFVSDDGGKEWMRANPNVPCLAMSSMLALPGRLLVGTTPAALYAKADTRWQEVKGVRAGAVGGTFPPNPDFPARTRVLSREDKPGGRL
Ga0193749_106907423300020010SoilMASNGKNALHLATHSGWYRFERRAEDWVQADRALTYWQMSCVQVDPEDPKRVYIGTEHSGMFVTNDGGKDWIRANPNVPCLTMSSMLALPGKLLVGTMPAALYYTNDGSGWQELKGVRQGAAGGTFPPNPDFPARTRVLTNEKTNGGRLFAGIEVAGILV
Ga0210381_1033644813300021078Groundwater SedimentMENNGTDALHLATHSGWYRFERRGEDWVQTDRALTFWQMSCIQVDPDNPKRVYIGTEHSGMFVTDDGGKEWTRANPNVPCLTMSAMLALSGKLLVGTMPAALYCKAESGGWQELKGVRQGSVGGSFPPNPDFPARTRVLTKENDNG
Ga0224497_1001225253300022209SedimentMATNSNNALHLATHSGWYRFEREGENWAQVDRALTFWQMSCIQVDPQDSKRVYIGTEHSGMFITDNGGKEWTRANPNVPCLTMSSMLAMPGKLLVGTMPAALYFKSESGAWQELKGVRQGAVGGTFPPNPDFPARTRVLSKEKGSGGRLFAGIE
Ga0210114_101655213300025795Natural And Restored WetlandsMTMDETRDQALHLATHSGWYRYERRGEDWIQVGRALTFWQMSCLQVDPEDPRRVYIGTEHSGMFFTNDGGKDWMRAKPNVPCLTMSSMLALPAKLLVGTMPAALYSKTDDGGWQELKGVRQGAAGGVFPPNPDLPARTRVL
Ga0207660_1065968713300025917Corn RhizosphereMENREAEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCVQVDPDNPKRVYIGTQHSGMFVTNDGGKDWTRANPNVPCLAMSSMLALSGKLLVGTMPAALYFTAEGGKWQELKGVRAGAAGGSFPPNPDFPPRTRVITREKNNGGRLF
Ga0207660_1117779113300025917Corn RhizosphereMANNGTDALHLATHSGWYRFERRGEEYAQADRALTFWQMSCIQVDPDNPKRVYIGTEHSGMFVTDDGGKEWTRANPNVPCLTMSAMLALSGKLLVGTMPAALYCKAESGSWQELKGVRQGSVGGSFPPNPDFPARTRVLIKEKGNSGRLFAGIEVAGILVSDDDGQNWQAASDGLTDPDIHQILPSKQV
Ga0207701_1144846813300025930Corn, Switchgrass And Miscanthus RhizosphereMGTNREALHLATHSGWYRYERSGEDWHPTDRALTFWQMSCIQVDPENSERVYIGTERSGMFVSDDGGKEWLRANPNVPCLALSAMLALPGRLLVGTTPAALYVKADTRWQEVKGVRAGAVGGTFPPNPDFPARTRVLSREDKLGGRLF
Ga0207644_1015200513300025931Switchgrass RhizosphereMTVNENRDQALHLATHSGWYRYEPRGADWIQADRALTYWQMSCLQVNPEDPKHVYIGTEHSGMFISRNGGADWTRADPNVPCLTMSSMLALPGKLLAGTMPAALYVTANGGGWEELKGVRQGSIGGSFPPNPDFPPRTRVLKKSHQNGGRLFAGIEVAGILVSDDNGQSWVAANDGLTDPDVHQILP
Ga0207690_1006702733300025932Corn RhizosphereMTVNENRDQALHLATHSGWYRYEPRGADWIQADRALTYWQMSCLQVNPEDPKHVYIGTEHSGMFISSNGGEDWTRADPNVPCLTMSSMLALPGKLLAGTMPAALYVTANGGGWKELKGVRQGSIGGSFPPNPDFP
Ga0207706_1098798213300025933Corn RhizosphereMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAAVYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENAKGGRLFAGIEVAG
Ga0207709_1044614113300025935Miscanthus RhizosphereMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENAKGGRLFAGIEV
Ga0207704_1101419513300025938Miscanthus RhizosphereMEAQEKNALHLATHSGWYRFERRGETWEQTDRALTYWQMSCIQVDPDNSKRVYIGTERSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGQLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENTKGGRLF
Ga0207711_1036576323300025941Switchgrass RhizosphereMAANGTAKAIHLGTHSGWYRFEQQGEDWRESDRALTFWQTSCIQVDPANPQRVYVGTEHSGMFVSDDAGKDWQRAEPNVPRLEMSAMLALPGKLLVGTRPAALYMRGESGPWQEIKGVTGIERCFGGHLYPEKARPGF
Ga0207640_1101296223300025981Corn RhizosphereMKANGNGDKALHLATHSGWYRFEPRGTEWIQADRALTYWQMSCIQVDPQDPERVYIGTEHSGMFVSRNGGADWSRANPNVPCLTMSSMLALPGKLLAGTMPAALYVKTNGGQWQELPGVRQGSSGGSFPPNPDFPPRTRVLKKSHENGGRLFAGIEVAGILVSDDEGQSWAPAN
Ga0207674_1138895223300026116Corn RhizosphereMTANGNADQALHLATHSGWYRFEPRGTEWIQADRALTYWQMSCIQVDPQDPERVYIGTEHSGMFVSRNGGADWSRANPNVPCLTMSSMLALPGKLLAGTMPAALYVKTNGGQWQELPGVRQGSSGGSFPPNPDF
Ga0209240_128457613300026304Grasslands SoilMEAHGKEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAVGGTFPPNPDFPARTRVLTKENADGGRLFAGIEVAGILV
Ga0256867_1025469323300026535SoilMTSDGKNALHLATHSGWYRLEQQGENWLRVDRALTFWQMSCIQTDPENPKRVFIGTEHSGMFATDNGGQEWARANPNVPCLTMSSMLALPDGLLVGTMPAALFVKSKNGGWQELKGVRQGAVGGTFPPNPDFPARTRVLAKENKPRGRLFVGIEVAGILVS
Ga0209973_101257013300027252Arabidopsis Thaliana RhizosphereMTMDKTTDQALHLATHSGWYRYERRGEDWVQAGRALTFWQMSCLQVDLEDPRRVYIGTEHSGMFLTNDGGKDWARAKPNVPCLTMSSMLALPGKLLVGTMPAALYYKTNDGGWQELKGVRQGAAGGVFPPNPDLPARTRVLAKEQYNGGRLFAGIEVAGILTSDDEG
Ga0209998_1001828613300027717Arabidopsis Thaliana RhizosphereMTMDKTTDQALHLATHSGWYRYERRGEDWVQAGRALTFWQMSCLQVDLEDPRRVYIGTEHSGMFLTNDGGKDWARAKPNVPCLTMSSMLALPGKLLVGTMPAALYYKTNDGGWQELKGVRQGAAGGVFPPNPD
Ga0209074_1001528333300027787Agricultural SoilMTVNENRDQALHLATHSGWYRYEPRGADWIQADRALTYWQMSCLQVDPEDPKHVYIGTEHSGMFISRNGGADWSRADPNVPCLTMSSMLALPGKLLAGTMPAALYVAANDDGWKELKGVRQGSIGGSFP
Ga0209706_1032157523300027818Freshwater SedimentMTTNGKDALHLATHSGWYRFERKGEDWAQTDRALTFWQMSCIQVDPENPKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYCTTEGTGWQELKGVRQGAIGGTFPPNPEFPARTRVLTREKENGGRLF
Ga0207428_1071637223300027907Populus RhizosphereMEAQEKNALHLATHSGWYRFERRGETWEQTDRALTYWQMSCIQVDPDNSKRVYIGTERSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLFVGTMPAALYLTAEGGGWQELKGVREGAVGGTFP
Ga0307503_1023896313300028802SoilMAANEKNSLHLATHSGWYRYERRGENWEQADRALTFWQMNCIQVDPNDAKHVYAGTEHSGMFVSQDGGKDWKRAEPNVPILEMSAMLALPGKVLVGTRPAALYLHKDGSGWQEVKGIRQGAFGGTFPPNPD
Ga0307501_1021083713300031152SoilMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENAD
Ga0307498_1021937213300031170SoilMEAQEKNALHLATHSGWYRFERRGENWEQADRALTYWQMSCIQVDPDNSKRVYIGTEHSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENAKGDRLF
Ga0299914_1135421623300031228SoilMTSNGDKALHLATHSGWYRFERRGEEWSQADRALTFWQMSCLQVDPDNPMRVYIGTERSGMFVTDDGGKEWTRANPNVPCLAMSAMLALPGKLLVGTMPAALYVNSQTGWHEIKGVREGAIGGTF
Ga0307469_1236165813300031720Hardwood Forest SoilMEAQEKNALHLATHSGWYRFERRGENWEQTDRALTYWQMSCIQVDPDNSKRVYIGTERSGMFVTDDGGKDWTRANPNVPCLTMSSMLALSGKLLVGTMPAALYFTAEGGGWQELKGVRQGAAGGTFPPNPDLPARTRVLTKENAKAGRL
Ga0307468_10209332713300031740Hardwood Forest SoilMPANGPEKRAIHLATHSGWYRYEQQGEDWQQTDRALTFWQTSCVQVDPDDSKHIYVGTEHSGMFVTKDAGQDWARAEPNVPCLEMSAMLALPGKLLVGTRPAALYISEGKGWEEITGIRQGAFGGT
Ga0310890_1023505713300032075SoilMGTNREALHLATHSGWYRYERSGEDWGPTDRALTFWQMSCIQVDPESPERMYIGTERSGMFVSDDGGKEWMRANPNVPCLAMSSMLALPGRLLVGTTPAALYVKADTRWQEVKGVRAGAVGGTFPPNPEFPARTRVLSREDKPGGRLFAG
Ga0214472_1055665833300033407SoilMATNGNNALHLATHSGWYRFDRQGENWAQADRALTFWQMSCIQVDPENPQRVYIGTEHSGMFVTDNGGKEWTRANPNVPCLTMSSMLALPGKLLVGTMPAALYLKPEGAGWQELKGVRQGAVGGTFPPNPDFPARTRVLTR
Ga0214471_1038466113300033417SoilMATNGNNALHLATHSGWYRFDGQGENWAQADRALTFWQMSCIQVDPENPQRVYIGTEHSGMFVTDNGGKEWTRANPNVPCLTMSSMLALPGKLLVGTMPAALYLKPEGAGWQELKGVRQGAVGGTFPPNPDFPARTRVLTRENKPSGRFF
Ga0316601_10181929213300033419SoilMAANENNALHLATHSGWYRYERRGENWEPTDRALTFWQMSCIQVDPNDAKHVYAGTEHSGMFVSKDGGKDWQRAEPNVPILEMSAMLALPGKVLVGTRPAALYMHKNGSGWQEIKGIRQGAFGGTFPPNPDLAPRTRVLTMEKASGSRLY
Ga0310811_1033018123300033475SoilMTVNENRDQALHLATHSGWYRYEPRGADWIQADRALTYWQMSCLQVDPEDPKHVYIGTEHSGMFISRNGGADWTRADPNVPCLTMSSMLALPGKLLAGTMPAALYVTANGGGWKELKGVRQGSIGGSFPPNPDFPPRTRVLKKSHQNDGRLFAGIEVAGILVSDDDGQ
Ga0364946_084299_193_6903300033815SedimentMTGNGNEKNALHLATHSGWYRFDRQGEDWVQTDRALTFWQMSCIQVDPDNSKRVYAGTEHSGMFVTNDGGKDWSRAEPNVPCLEMSAMLALSGKLLVGTRPAALYLNSQGKGWHEIKGVRQGAFGGTFPPNPDLAPRTRVLTRENQANGRLYAGIEVGGILVSDDD
Ga0364925_0108942_1_4353300034147SedimentMATNGINVLHLATHSGWYRFDRQGENWAQADRALTFWQMSCIQVDPENPRRVYIGTEHSGMFVTDNGGKEWTRANPNVPCLAMSSMLALPGKLLVGTMPSALYFKPEDGGWQELKGVRQGSIGGTFPPNPDFPARTRVLTRENKP
Ga0364929_0359402_114_5063300034149SedimentMAGNEKNALHLATHSGWYRFDRQGEDWVQTDRALTFWQMSCIQVDPDNPKKVYAGTEHSGMFVTNDGGKDWSRAEPNVPILEMSALLALSGKLLVGTRPAALYVNSQGKGWQEIKGVRQGAFGGTFPPNPD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.