Metagenome / Metatranscriptome Family F090721

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090721
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	49 residues
Representative Sequence	MRYARILSIGLVATVAFAWSAAAVENAHELAGYCQSLERGAKGDG
Number of Associated Samples	86
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	29.63 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	93.52 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.259 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.852 % of family members)
Environment Ontology (ENVO)	Unclassified (38.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.259 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.16% β-sheet: 0.00% Coil/Unstructured: 43.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF03330	DPBB_1	60.19
PF06912	DUF1275	1.85
PF11684	DUF3280	1.85
PF00589	Phage_integrase	1.85
PF05988	DUF899	0.93
PF12697	Abhydrolase_6	0.93
PF06055	ExoD	0.93
PF00291	PALP	0.93
PF04357	TamB	0.93
PF07045	DUF1330	0.93
PF13676	TIR_2	0.93
PF05199	GMC_oxred_C	0.93
PF01068	DNA_ligase_A_M	0.93
PF13817	DDE_Tnp_IS66_C	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	1.85
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.93
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.93
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.93
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	0.93
COG3932	Exopolysaccharide synthesis protein ExoD	Cell wall/membrane/envelope biogenesis [M]	0.93
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.93
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
All Organisms	root	All Organisms	40.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
cellular organisms	root	All Organisms → cellular organisms	40.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.56 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.78 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.93 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.78 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.93 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.93 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.93 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
unclassified Ensifer	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer	0.93 %
Bradyrhizobium sp. NC92	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NC92	0.93 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.70 %
Ensifer sp. M14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. M14	0.93 %
Bradyrhizobium sp. NC92	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NC92	0.93 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10163041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1008548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1960	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1042759	Not Available	818	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10030461	Not Available	1265	Open in IMG/M
3300000955\|JGI1027J12803_101427898	Not Available	846	Open in IMG/M
3300000956\|JGI10216J12902_111003741	Not Available	503	Open in IMG/M
3300004267\|Ga0066396_10028050	Not Available	804	Open in IMG/M
3300005180\|Ga0066685_11079064	Not Available	526	Open in IMG/M
3300005332\|Ga0066388_102023755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1033	Open in IMG/M
3300005332\|Ga0066388_102159501	Not Available	1003	Open in IMG/M
3300005555\|Ga0066692_10568188	Not Available	715	Open in IMG/M
3300005713\|Ga0066905_100658810	All Organisms → cellular organisms → Bacteria → Proteobacteria	893	Open in IMG/M
3300005713\|Ga0066905_101398015	Not Available	633	Open in IMG/M
3300005764\|Ga0066903_101623507	Not Available	1227	Open in IMG/M
3300005764\|Ga0066903_102721847	Not Available	959	Open in IMG/M
3300005764\|Ga0066903_108976875	Not Available	506	Open in IMG/M
3300006034\|Ga0066656_10625977	Not Available	695	Open in IMG/M
3300006175\|Ga0070712_100206066	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300006847\|Ga0075431_100434284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1311	Open in IMG/M
3300006871\|Ga0075434_100819032	Not Available	947	Open in IMG/M
3300006904\|Ga0075424_102589115	Not Available	530	Open in IMG/M
3300006953\|Ga0074063_14052412	Not Available	677	Open in IMG/M
3300009147\|Ga0114129_12969645	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300009162\|Ga0075423_10080630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3390	Open in IMG/M
3300009792\|Ga0126374_11597781	Not Available	538	Open in IMG/M
3300010043\|Ga0126380_10364526	Not Available	1058	Open in IMG/M
3300010046\|Ga0126384_11247111	Not Available	687	Open in IMG/M
3300010047\|Ga0126382_10250726	Not Available	1297	Open in IMG/M
3300010047\|Ga0126382_10436686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1033	Open in IMG/M
3300010303\|Ga0134082_10555252	Not Available	506	Open in IMG/M
3300010359\|Ga0126376_11424010	Not Available	719	Open in IMG/M
3300010362\|Ga0126377_11869888	Not Available	676	Open in IMG/M
3300010362\|Ga0126377_13171522	Not Available	531	Open in IMG/M
3300010366\|Ga0126379_10098984	Not Available	2587	Open in IMG/M
3300010375\|Ga0105239_12976534	Not Available	552	Open in IMG/M
3300010376\|Ga0126381_104924549	Not Available	513	Open in IMG/M
3300010379\|Ga0136449_102468701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. M14	747	Open in IMG/M
3300010398\|Ga0126383_11311361	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300012200\|Ga0137382_10005336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	6368	Open in IMG/M
3300012209\|Ga0137379_11132120	Not Available	689	Open in IMG/M
3300012210\|Ga0137378_10616853	Not Available	995	Open in IMG/M
3300012212\|Ga0150985_109035151	Not Available	694	Open in IMG/M
3300012285\|Ga0137370_10620845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300012285\|Ga0137370_10808637	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300012354\|Ga0137366_10559368	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300012356\|Ga0137371_10806846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NC92	715	Open in IMG/M
3300012948\|Ga0126375_11711168	Not Available	546	Open in IMG/M
3300012960\|Ga0164301_10674412	Not Available	774	Open in IMG/M
3300012961\|Ga0164302_10268330	Not Available	1095	Open in IMG/M
3300012971\|Ga0126369_11343060	Not Available	805	Open in IMG/M
3300012971\|Ga0126369_11677140	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300012977\|Ga0134087_10515998	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300012986\|Ga0164304_11155881	Not Available	623	Open in IMG/M
3300012989\|Ga0164305_11065607	Not Available	692	Open in IMG/M
3300016294\|Ga0182041_11694970	Not Available	585	Open in IMG/M
3300016319\|Ga0182033_10802739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	829	Open in IMG/M
3300016319\|Ga0182033_11307150	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300016319\|Ga0182033_11849545	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300016404\|Ga0182037_11933753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300016422\|Ga0182039_10020944	All Organisms → cellular organisms → Bacteria	4035	Open in IMG/M
3300016422\|Ga0182039_11261205	Not Available	669	Open in IMG/M
3300018468\|Ga0066662_11215278	Not Available	764	Open in IMG/M
3300018468\|Ga0066662_11430911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300020583\|Ga0210401_11272598	Not Available	594	Open in IMG/M
3300021180\|Ga0210396_10044693	All Organisms → cellular organisms → Bacteria → Proteobacteria	4070	Open in IMG/M
3300021403\|Ga0210397_11487709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300021560\|Ga0126371_10376350	Not Available	1559	Open in IMG/M
3300025928\|Ga0207700_11822270	Not Available	534	Open in IMG/M
3300026298\|Ga0209236_1112387	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300027874\|Ga0209465_10092430	Not Available	1480	Open in IMG/M
3300028884\|Ga0307308_10461562	Not Available	609	Open in IMG/M
3300031543\|Ga0318516_10658275	Not Available	596	Open in IMG/M
3300031573\|Ga0310915_10196282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1410	Open in IMG/M
3300031573\|Ga0310915_11161489	Not Available	535	Open in IMG/M
3300031680\|Ga0318574_10466011	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031681\|Ga0318572_10984549	Not Available	501	Open in IMG/M
3300031719\|Ga0306917_10165196	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300031719\|Ga0306917_10283738	Not Available	1276	Open in IMG/M
3300031719\|Ga0306917_10643553	Not Available	834	Open in IMG/M
3300031751\|Ga0318494_10665978	Not Available	609	Open in IMG/M
3300031754\|Ga0307475_10880340	Not Available	708	Open in IMG/M
3300031770\|Ga0318521_10099013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1601	Open in IMG/M
3300031771\|Ga0318546_10479164	Not Available	872	Open in IMG/M
3300031781\|Ga0318547_10501579	Not Available	749	Open in IMG/M
3300031821\|Ga0318567_10381822	All Organisms → cellular organisms → Bacteria → Proteobacteria	798	Open in IMG/M
3300031845\|Ga0318511_10484414	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300031846\|Ga0318512_10557111	Not Available	583	Open in IMG/M
3300031860\|Ga0318495_10414791	Not Available	592	Open in IMG/M
3300031880\|Ga0318544_10094596	All Organisms → cellular organisms → Bacteria → Proteobacteria	1122	Open in IMG/M
3300031893\|Ga0318536_10076707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1651	Open in IMG/M
3300031942\|Ga0310916_10023614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4397	Open in IMG/M
3300031946\|Ga0310910_11584311	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300031954\|Ga0306926_10473465	All Organisms → cellular organisms → Bacteria → Proteobacteria	1542	Open in IMG/M
3300031954\|Ga0306926_11429043	Not Available	801	Open in IMG/M
3300032010\|Ga0318569_10321830	Not Available	720	Open in IMG/M
3300032035\|Ga0310911_10611364	Not Available	632	Open in IMG/M
3300032054\|Ga0318570_10287168	Not Available	747	Open in IMG/M
3300032054\|Ga0318570_10507216	Not Available	550	Open in IMG/M
3300032059\|Ga0318533_10239353	All Organisms → cellular organisms → Bacteria → Proteobacteria	1308	Open in IMG/M
3300032059\|Ga0318533_10750113	Not Available	716	Open in IMG/M
3300032059\|Ga0318533_11134909	Not Available	572	Open in IMG/M
3300032063\|Ga0318504_10508833	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300032076\|Ga0306924_11631683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300032180\|Ga0307471_102475128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300032261\|Ga0306920_100241748	All Organisms → cellular organisms → Bacteria → Proteobacteria	2694	Open in IMG/M
3300032261\|Ga0306920_101137923	All Organisms → cellular organisms → Bacteria → Proteobacteria	1130	Open in IMG/M
3300032261\|Ga0306920_103786712	Not Available	553	Open in IMG/M
3300033290\|Ga0318519_10952366	Not Available	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.52%
Host-Associated	Host-Associated	6.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.52%
Plants	Host-Associated → Plants	6.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.33%
Loam	Environmental → Terrestrial → Soil → Loam	10.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101630411	3300000597	Forest Soil	MKYARILSIGLVVAVVLAWSAAAAVENARELADYCQSLERDAKGAGRH
AF_2010_repII_A100DRAFT_10085481	3300000655	Forest Soil	MKYARILSIGLVATVAFAWSTAAAVENTRELAGYCQSL
AF_2010_repII_A100DRAFT_10427591	3300000655	Forest Soil	MKYARILSIGLVATVAFAWSTAAAVENTRELAGYCQSLERGAKGAGRHIYIPRTREALTC
AF_2010_repII_A001DRAFT_100304611	3300000793	Forest Soil	MKYARILSIGLVATVAFAWSTAAAVENTRELAGYCQSLE
JGI1027J12803_1014278983	3300000955	Soil	MKYARTLLIGLVATVAFAWSAAAFENADELAGYCQSLERGA
JGI10216J12902_1110037411	3300000956	Soil	MRYARILSIGLVATVAFAWSAAAIENAHELAGYCQSVERGTKGAGRQIYIPRTPEALT
Ga0066396_100280501	3300004267	Tropical Forest Soil	MRYARTLLIGLVATVAFAWSAAAIENADELAGYCQSLERGAKGAGRHIYIP
Ga0066685_110790641	3300005180	Soil	MRYARILSIGLVATVAFAWSAGAVENAHELAGYCQSLERG
Ga0066388_1020237553	3300005332	Tropical Forest Soil	MRYARILSSGLVAAVAFAWSAAAVENAHELAGYCQSLERGAKGAGRHIYIPRTPEALT
Ga0066388_1021595012	3300005332	Tropical Forest Soil	MRYARILPIGLVAIVAFAGSGAAVENAHELAGDCQSLERGAKG
Ga0066692_105681882	3300005555	Soil	MKYARILSIGLVVTVAFAWSAAAAVENARELAGYCQSLERGAKGAGRHIYIPRTSEA
Ga0066905_1006588101	3300005713	Tropical Forest Soil	MMSDTLMDILSIGLVVTVAFAWSSAAAVENARELAAYCQSLERGAEGTRRQIYIPRTSEALTCWGY
Ga0066905_1013980151	3300005713	Tropical Forest Soil	MRNARILSIGLVTAVAFAWSAAAVEHAHELAGYCQSLERGAKGAGRHIYIPRTR
Ga0066903_1016235071	3300005764	Tropical Forest Soil	MKYARILSIGLVVTVAFAWSAAAAVENARELAGYCQSLERGAKGA
Ga0066903_1027218471	3300005764	Tropical Forest Soil	MKYVRILSIGLVVTVAFAWSTAAAVENTRELAGYCQSLERGAKGAGRHIYIPRT
Ga0066903_1089768751	3300005764	Tropical Forest Soil	MKYARILAIGLVATVAFALSSAAAAVENARELAGYCQSLERGAKG
Ga0066656_106259771	3300006034	Soil	MLLMRYARILSIELVAIVSFASSAAAVESAHELAGYCQSLERGAKGAGRHIYIPR
Ga0070712_1002060661	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLLIALVAAVAFVWSAAAIENAEELVGYCQSLERGAKGAGRHIYIPSTREAL
Ga0075431_1004342844	3300006847	Populus Rhizosphere	MRYARILPIGLVAIVAFAWSGAAVENAHDLAGDCQSLERSAKGAGRHIYIPR
Ga0075434_1008190321	3300006871	Populus Rhizosphere	MRTLSIGLVVTVAFAWSAAAAVENARELAGYCQSLERGAK
Ga0075424_1025891151	3300006904	Populus Rhizosphere	MKYARTLLIGLVATVAFAWSAAAVENADELAGYCQSLERGAKGA
Ga0074063_140524122	3300006953	Soil	MRYARILSIGLVATVAFAWSAAAVENAHELAGYCQSLERGAKGDG
Ga0114129_129696452	3300009147	Populus Rhizosphere	MKYARNLSIGLVVTVAFAWSAAAAVENARELAGYCQSLERGTKGAGR
Ga0075423_100806301	3300009162	Populus Rhizosphere	MRYARILSIGLVATVAFAWNAAAVEDAHELAGYCQSLERGVK
Ga0126374_115977811	3300009792	Tropical Forest Soil	MRYARILSIGLVATVAFAWSAAAIENADELAGYCQSLERGAKGA
Ga0126380_103645263	3300010043	Tropical Forest Soil	MRYTRILPIGLVATVASAWSAAAIENAVGYCQSLERGAKGAGRHIYI
Ga0126384_112471111	3300010046	Tropical Forest Soil	MRYARILSIGLVAAVAFAWSAAAIENADELAGYCQSLERG
Ga0126382_102507261	3300010047	Tropical Forest Soil	MKYARILSIGLVATVAFAWSTAAAVENTRELAGYCQSLERGAKGAGRHIYIPRTRE
Ga0126382_104366861	3300010047	Tropical Forest Soil	MMSDTLMDILSIGLVVTVAFAWSSAAAVENARELAAYCQSLERGAEGTRRQIYIPRTSEALTCW
Ga0134082_105552521	3300010303	Grasslands Soil	MRYARILSIGLVASVAFAWSAAAVENAYELAGYCQRLERGAKGAGRHIYIPRTREALTCW
Ga0126376_114240102	3300010359	Tropical Forest Soil	MNYARILSIGLVVAVVFAWSAAAAVENARELADYCQSLERGAKGAERHIYIPRTRE
Ga0126377_118698881	3300010362	Tropical Forest Soil	MRNARILSIGLVAAVAFAWNAAAVENADDLAGYCQSL
Ga0126377_131715222	3300010362	Tropical Forest Soil	MKYARILSIGLVVTVAFAWSAAAAVENARELAGYCQSLERGAKGAGRHIYIP
Ga0126379_100989841	3300010366	Tropical Forest Soil	MRYARILSIGLATVAFAWSAAAVENAQELSGYCQNLERGAK
Ga0105239_129765341	3300010375	Corn Rhizosphere	MRYARILSIGLVAIVVFAWSAAAVENADELAGYCQSLERGAK
Ga0126381_1049245492	3300010376	Tropical Forest Soil	MIGLVATVAFAWSAAAIENAEELAGYCQSLERGAEGAGRHLY
Ga0136449_1024687011	3300010379	Peatlands Soil	RRRPPMRYAHILSIGLVATVAFGWSAAAVENAHELAGYCQSLERGAKGDGRHIYIPRTREAL*
Ga0126383_113113612	3300010398	Tropical Forest Soil	MQYARILSIGLVVTVAFAWSTAAAVENARELAGYCQSLERGAKGPGRHIYIPRTS
Ga0137382_100053361	3300012200	Vadose Zone Soil	YARILSIGLVATVALAWSASAIENAPELAGYCQSLERGAKGAGRHINGDAGFLGARR*
Ga0137379_111321202	3300012209	Vadose Zone Soil	MRYVRILSIGLVATVTFAWSAAAVENAHELAGYCQSLERGAKGAGRHIYIPRTR
Ga0137378_106168531	3300012210	Vadose Zone Soil	MCDILSIGLVATVAFAWSAAAVENAHELAGYCQSLERGAKGA
Ga0150985_1090351512	3300012212	Avena Fatua Rhizosphere	MRYAHILSIALIATVICASSAAAVEDAQELVGFCESLVQVTKGAGREIYIPRTREALTCWGYNQAMRDLSVLSDEDGR
Ga0137370_106208452	3300012285	Vadose Zone Soil	MRYARILSIGLVASVAFAWSAAAVENAYELADYCQRLERGAKGA
Ga0137370_108086372	3300012285	Vadose Zone Soil	MRYSRILSIGLVASVAFAWSAAAVENAYELADYCQRLERGAKGA
Ga0137366_105593681	3300012354	Vadose Zone Soil	MRYARILSIGLVASVAFAWSAAAVENAYELADYCQRLERGAKGAGRHIYIPRTREAL
Ga0137371_108068462	3300012356	Vadose Zone Soil	MRYARILAIGLVATVAFAWSAAAIENAHELAGYCQSLERGTKGAGRQIYIPRTPEA
Ga0126375_117111682	3300012948	Tropical Forest Soil	MRYARILSIGLVATVAFAWSAAAIENADELAGYCQSL
Ga0164301_106744122	3300012960	Soil	MRYARILSIGLVATVAFAWSAAAVENAHELAGYCQSLERSAKGDGRHIYIPR
Ga0164302_102683301	3300012961	Soil	MRYARILSIGLVAIVVFAWSAAAVENADELAGYCQSLERGAKGDGRH
Ga0126369_113430601	3300012971	Tropical Forest Soil	MRYARILSIGLVATVAFAWSAAAIENADELAGYCQSLERGAKG
Ga0126369_116771401	3300012971	Tropical Forest Soil	MREIGLVATVAFARSAAAAVENARELAGYCQSLER
Ga0134087_105159981	3300012977	Grasslands Soil	MKYTRILSIGLVATVAFAWSAAAVENAHELAGYCQSLERGA
Ga0164304_111558811	3300012986	Soil	MRYARTLSIGLVATVAFAWSAAAIENADELAGYCQSLERGAKGAGRHIYIPSTREALTCWGY
Ga0164305_110656072	3300012989	Soil	MRYARILSIGLVATVAFAWSAAAVEDAHELAGYCQSLERGVKGASRHIYI
Ga0182041_116949702	3300016294	Soil	MKYARILSIGLLATVAFAWSTAAAVENTRELAGYCQSLERGAKGAGRHIYIPRTREALTCWG
Ga0182033_108027391	3300016319	Soil	MRYARILSIGLVATVAFAWSAAAVENAHELSGYCQSLERGAKGA
Ga0182033_113071501	3300016319	Soil	MKHARTLSIGLVVTVAFAWSAAAAVENARELAGYCQSLERGAEGTKRQIYTPRTREAVTCWGYRQAMKGLSVLADEEGHRMRG
Ga0182033_118495451	3300016319	Soil	MRYARTLLIGLVATVAFAWSAAAIENANELAGYCQGVERGAKGAGRHIYIPSTREALTCW
Ga0182037_119337531	3300016404	Soil	TPIKYARILSVGLVATVAFAWSTAAAVENTRERAGYCQSLECGAKGAGRHIYIPRTREASRCL
Ga0182039_100209441	3300016422	Soil	MKYARILSIGLLATVAFAWSTAAAVENTRELAGYCQSLERGAKG
Ga0182039_112612051	3300016422	Soil	MKYARILSIGLVATVAFAWSTAAAVENTRELAGYCQSLERGA
Ga0066662_112152781	3300018468	Grasslands Soil	MRCARILSIWLVAVVAFAWSAAAVENVDELAGYCQSLERGTKGAGRHIYIPR
Ga0066662_114309112	3300018468	Grasslands Soil	MRYARILSIGLVASVAFAWSAAAVENAYELAGYCQRLERGAKGAGR
Ga0210401_112725982	3300020583	Soil	MRCAHILSIGLLATVAFAWSAAAVENAHELAGYCQSLERGAKGDGRHLYIPRTREALT
Ga0210396_1004469310	3300021180	Soil	MRYARILSIGLVATAAFAWSAAAVENAHELAGYCQSLERGAKGDGRHLYIPRT
Ga0210397_114877092	3300021403	Soil	MRYARILSIGLVAIVVFAWSAAAVENADELAGYCQSLERGAKGAGRHIY
Ga0126371_103763501	3300021560	Tropical Forest Soil	MRYASTLLIGLVATVAFAWSAAAIENADELAGYCQSLERGAKGA
Ga0207700_118222702	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRYARILSIGLVATVAFAWSAGAVEDAHELAGYCQSLERGVKGASRHIYIPRTREAL
Ga0209236_11123873	3300026298	Grasslands Soil	MRYARILSIGLVATVAFAWSAAAVENAHELAGYCQ
Ga0209465_100924305	3300027874	Tropical Forest Soil	MRYARILSIGLVAAVAFAWSAAAIENADELAGYCQSLERGAKGAGRHIYIPSTREALTC
Ga0307308_104615622	3300028884	Soil	MRYARILSIGLVATGAFAWSAAAVEDAHELAGYCQI
Ga0318516_106582752	3300031543	Soil	MKYARILSIGLVATVAFAWSTAAAVENTRELAGYCQSLERGAKGAGRHIY
Ga0310915_101962823	3300031573	Soil	MKYARILSIGLVVTVAFAWSAAAAVENARELAGYCQSLERGAKGAGRRI
Ga0310915_111614892	3300031573	Soil	MKYARILSIGLVVTVAFAWSAAAAVENARELAGYCQTL
Ga0318574_104660111	3300031680	Soil	MKYARILSIGLVATVAFAWNAAAAVENARELAAYCQSLERGAKGAGRHIYIPRTWEALTCWGY
Ga0318572_109845491	3300031681	Soil	MKYARILSIGLVATMASAWSAAAAVENARELAGYCQSLERGAKGAGRH
Ga0306917_101651961	3300031719	Soil	MRYARTLLIGLVATVAFAWSAAAIENADELAGYCQSLERGAKGAGRHIYIPSTRE
Ga0306917_102837381	3300031719	Soil	MKYARILSIGLVVTVAFAWSAAAAVENARELAGYCQSLERG
Ga0306917_106435532	3300031719	Soil	MRYARILSTGLVAAVAFAWSAAAIENADELAGYCQSLERGAKGAGRHIYIPSTREALTC
Ga0318494_106659782	3300031751	Soil	MKYARILSIGLVATVAFAWSTAAAVENTRELAGYCQSLERGAKGAGRHIYIPRTREALTCWG
Ga0307475_108803402	3300031754	Hardwood Forest Soil	MRYARILSIGLVATVAFAWSAAAVENAHELAGYCQSLERG
Ga0318521_100990133	3300031770	Soil	MKYARILSIGLVATVAFAWNAAAAVENARELAAYCQSLERGAKGAGRHIYIPRT
Ga0318546_104791642	3300031771	Soil	MKYARILSIGLVATVAFAWNAAAAVENARELAAYCQSLER
Ga0318547_105015792	3300031781	Soil	MKYARILSIGLLATVAFAWSTAAAVENTRELAGYCQSLERGAKGAGRHIYIPRTREALTC
Ga0318567_103818221	3300031821	Soil	STAAAVENARELAGYCQSLECGAKGAGRHIYIPRTREASRCL
Ga0318511_104844141	3300031845	Soil	MRYARILSIGLVATVAFAWSAAAIENADELAGYCQSLERGAKGAGRHIYIPSTREALTCWGYI
Ga0318512_105571111	3300031846	Soil	MKYARILSIGLVATMASAWSAAAAVENARELAGYCQSLERGAKGAGRHI
Ga0318495_104147911	3300031860	Soil	MKYARILSIGLVATVAFAWNAAAAVENARELAGYCQS
Ga0318544_100945964	3300031880	Soil	MKYARILSIGLVATVAFAWSTAAAVENTRELAGDCQSLERGAKGAGRHIYIPRTREALTCWG
Ga0318536_100767074	3300031893	Soil	MKYARILSIGLVATVAFTWNAAAAVENARELAAYCQSLERG
Ga0310916_100236149	3300031942	Soil	MKYARILSIGLVATVAFAWSTAAAVENTRELAGYCQSLERGAKGAGR
Ga0310910_115843112	3300031946	Soil	MRYARTLLIGLVATVAFAWSAAAIENANELAGYCQG
Ga0306926_104734651	3300031954	Soil	GLVATVVFAWSTAAAVENARELAGYCQSLECGAKGAGRHIYIPRTREASRCL
Ga0306926_114290432	3300031954	Soil	MRYARILSTGLVAAVAFAWSAAAIENADELAGYCQSLERGAKGAGR
Ga0318569_103218302	3300032010	Soil	MKYARILSIGLVATVAFAWNAAAAVENARELAAYCQSLERGAKGAGRHIYI
Ga0310911_106113642	3300032035	Soil	MEYARILSIGLVATVAFAWSSAAAAVENARELADYCQSLERGTKGAGRHIYI
Ga0318570_102871681	3300032054	Soil	MKYARILSIGLVATVAFAWNAAAAVENARELAAYCQSLE
Ga0318570_105072162	3300032054	Soil	MKYARILSIGLVATVAFAWSAAAAVENTRELAGYCQSLERGAKGAGRHIYIPRTREALTCWG
Ga0318533_102393533	3300032059	Soil	MRYARILSIGLVAAVAFAWSAAAIENADELAGYCQSLERGAK
Ga0318533_107501131	3300032059	Soil	MRYARILSIGLVATVAFAWSAAAIENADELAGYCQSLERGAKGAGRHIYIPSTREALTCWGYIQAMQDL
Ga0318533_111349091	3300032059	Soil	MKYARILSIGLVATVAFAWSAAAAVENTRELAGYCQSLERGAKGAGR
Ga0318504_105088332	3300032063	Soil	MRYARTLLIGLVATVAFAWSAAAIENANELAGYCQGVER
Ga0306924_116316831	3300032076	Soil	EIPGDPLGIRDDPAPMKYARILSIGLVATVVFAWSTAAAVENARELAGYCQSLECGAKGAGRHIYIPRTREASRCL
Ga0307471_1024751281	3300032180	Hardwood Forest Soil	MRYARILSIGIVAIVAFAWSAAAIENADELAGYCQSLEH
Ga0306920_1002417485	3300032261	Soil	MKYARILSIGLVATVVFAWSTAAAVENARELAGYCQSLECGAKGAGRHIYIPRTREASRC
Ga0306920_1011379233	3300032261	Soil	MRYARILSIGLVAAVAFAWSAAAIENADELAGYCQ
Ga0306920_1037867122	3300032261	Soil	MKYPRILSIGLVVTVAFAWSAAAAVENARELAGYC
Ga0318519_109523661	3300033290	Soil	MKYARILSIGLVATVVFAWSTAAAVENARELAGYCQSLECGAKGAGRHIY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090721

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences