Metagenome / Metatranscriptome Family F090708

Basic Information
Family ID	F090708
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	57 residues
Representative Sequence	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEVMLVRRIVSG
Number of Associated Samples	97
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.22 %
% of genes near scaffold ends (potentially truncated)	35.19 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (74.074 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (12.037 % of family members)
Environment Ontology (ENVO)	Unclassified (39.815 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.185 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.69% β-sheet: 0.00% Coil/Unstructured: 29.31%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF04185	Phosphoesterase	55.56
PF01799	Fer2_2	14.81
PF00111	Fer2	5.56
PF01315	Ald_Xan_dh_C	2.78
PF07992	Pyr_redox_2	1.85
PF01741	MscL	1.85
PF02738	MoCoBD_1	1.85
PF07521	RMMBL	0.93
PF12849	PBP_like_2	0.93
PF00583	Acetyltransf_1	0.93
PF00941	FAD_binding_5	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	55.56
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.07 %
Unclassified	root	N/A	25.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.07 %
Unclassified	root	N/A	25.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.07 %
Unclassified	root	N/A	25.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.37 %
Unclassified	root	N/A	25.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.59 %
Unclassified	root	N/A	25.93 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.67 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.85 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.93 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.63 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.85 %
Yersiniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae	1.85 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.63 %
Serratia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia	1.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.85 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.63 %
Serratia marcescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	1.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.85 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0646123	All Organisms → cellular organisms → Bacteria	2188	Open in IMG/M
3300000878\|AL9A1W_1171714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	664	Open in IMG/M
3300001565\|A35518A_1184166	Not Available	524	Open in IMG/M
3300002028\|A17_1349354	Not Available	512	Open in IMG/M
3300002568\|C688J35102_119895875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	806	Open in IMG/M
3300004114\|Ga0062593_100423024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1201	Open in IMG/M
3300004156\|Ga0062589_100379293	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300005171\|Ga0066677_10372632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300005179\|Ga0066684_10597340	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005181\|Ga0066678_10763982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300005184\|Ga0066671_10279921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1039	Open in IMG/M
3300005327\|Ga0070658_10665165	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300005329\|Ga0070683_100281667	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300005337\|Ga0070682_100162805	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300005338\|Ga0068868_100110418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2234	Open in IMG/M
3300005339\|Ga0070660_101649676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546	Open in IMG/M
3300005341\|Ga0070691_10434036	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005354\|Ga0070675_101098831	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300005364\|Ga0070673_101776715	Not Available	584	Open in IMG/M
3300005434\|Ga0070709_10980044	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005435\|Ga0070714_100416141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1273	Open in IMG/M
3300005435\|Ga0070714_100534676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300005436\|Ga0070713_100456234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1201	Open in IMG/M
3300005436\|Ga0070713_102273035	Not Available	525	Open in IMG/M
3300005437\|Ga0070710_10017335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3683	Open in IMG/M
3300005437\|Ga0070710_10397659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	923	Open in IMG/M
3300005439\|Ga0070711_100407331	Not Available	1105	Open in IMG/M
3300005458\|Ga0070681_10317470	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300005535\|Ga0070684_100107436	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300005535\|Ga0070684_101396085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300005563\|Ga0068855_101282735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	759	Open in IMG/M
3300005569\|Ga0066705_10892443	Not Available	528	Open in IMG/M
3300005577\|Ga0068857_100242729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1650	Open in IMG/M
3300005616\|Ga0068852_100098154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2637	Open in IMG/M
3300005616\|Ga0068852_101695100	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005843\|Ga0068860_100376558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1401	Open in IMG/M
3300006175\|Ga0070712_100526277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	994	Open in IMG/M
3300006175\|Ga0070712_100536202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	985	Open in IMG/M
3300006237\|Ga0097621_101261628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300006581\|Ga0074048_11771992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300006794\|Ga0066658_10138865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1214	Open in IMG/M
3300006806\|Ga0079220_10428962	Not Available	875	Open in IMG/M
3300006852\|Ga0075433_10276704	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300006854\|Ga0075425_102726461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300009093\|Ga0105240_10046417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5504	Open in IMG/M
3300009162\|Ga0075423_10980398	Not Available	897	Open in IMG/M
3300009177\|Ga0105248_12938660	Not Available	543	Open in IMG/M
3300009551\|Ga0105238_10593763	Not Available	1115	Open in IMG/M
3300009551\|Ga0105238_10808751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300009553\|Ga0105249_11289337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300010152\|Ga0126318_10439757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300010152\|Ga0126318_10440765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300010152\|Ga0126318_10826120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1158	Open in IMG/M
3300010358\|Ga0126370_12220202	Not Available	541	Open in IMG/M
3300010371\|Ga0134125_10051022	All Organisms → cellular organisms → Bacteria	4604	Open in IMG/M
3300010373\|Ga0134128_12582907	Not Available	560	Open in IMG/M
3300010399\|Ga0134127_10074147	All Organisms → cellular organisms → Bacteria	2899	Open in IMG/M
3300011998\|Ga0120114_1002269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5556	Open in IMG/M
3300012003\|Ga0120163_1120651	Not Available	563	Open in IMG/M
3300012004\|Ga0120134_1062073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → Serratia marcescens	663	Open in IMG/M
3300012209\|Ga0137379_10758618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300012210\|Ga0137378_10999890	Not Available	750	Open in IMG/M
3300012389\|Ga0134040_1274219	All Organisms → cellular organisms → Bacteria → Terrabacteria group	713	Open in IMG/M
3300012958\|Ga0164299_10481983	Not Available	820	Open in IMG/M
3300012971\|Ga0126369_13695424	Not Available	501	Open in IMG/M
3300012985\|Ga0164308_10143971	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1751	Open in IMG/M
3300012986\|Ga0164304_10244019	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1200	Open in IMG/M
3300012989\|Ga0164305_11094184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300013297\|Ga0157378_11028471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300013307\|Ga0157372_10560990	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300013307\|Ga0157372_11723494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300013503\|Ga0120127_10029544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300013766\|Ga0120181_1029952	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300014325\|Ga0163163_11612009	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300014497\|Ga0182008_10110689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1361	Open in IMG/M
3300015089\|Ga0167643_1041607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300015357\|Ga0134072_10087827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300019887\|Ga0193729_1217495	Not Available	636	Open in IMG/M
3300019890\|Ga0193728_1145348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1049	Open in IMG/M
3300020069\|Ga0197907_11242946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300020070\|Ga0206356_10462124	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300020076\|Ga0206355_1015033	Not Available	622	Open in IMG/M
3300020081\|Ga0206354_10771378	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300020082\|Ga0206353_10277401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	840	Open in IMG/M
3300022467\|Ga0224712_10120644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1135	Open in IMG/M
3300025544\|Ga0208078_1111895	Not Available	548	Open in IMG/M
3300025625\|Ga0208219_1084044	Not Available	738	Open in IMG/M
3300025901\|Ga0207688_10632631	Not Available	675	Open in IMG/M
3300025906\|Ga0207699_10455816	Not Available	918	Open in IMG/M
3300025911\|Ga0207654_10198759	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300025911\|Ga0207654_11407036	Not Available	509	Open in IMG/M
3300025916\|Ga0207663_10319279	Not Available	1166	Open in IMG/M
3300025919\|Ga0207657_10694854	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300025921\|Ga0207652_10568414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300025927\|Ga0207687_10020183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4420	Open in IMG/M
3300025928\|Ga0207700_10333835	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300025931\|Ga0207644_10186552	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300025939\|Ga0207665_10190668	Not Available	1489	Open in IMG/M
3300025941\|Ga0207711_10152247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2088	Open in IMG/M
3300025944\|Ga0207661_10216028	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300025949\|Ga0207667_11252006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	720	Open in IMG/M
3300026023\|Ga0207677_10095411	All Organisms → cellular organisms → Bacteria	2174	Open in IMG/M
3300026035\|Ga0207703_12191418	Not Available	529	Open in IMG/M
3300026116\|Ga0207674_10681755	Not Available	992	Open in IMG/M
3300026312\|Ga0209153_1114206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1021	Open in IMG/M
3300026325\|Ga0209152_10417707	Not Available	531	Open in IMG/M
3300031938\|Ga0308175_100863701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300032896\|Ga0335075_10755256	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.67%
Host-Associated	Host-Associated	32.41%
Engineered	Engineered	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.89%
Plants	Host-Associated → Plants	32.41%
Aquatic	Environmental → Aquatic	2.78%
Solid Waste	Engineered → Solid Waste	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.19%
Freshwater	Environmental → Aquatic → Freshwater	2.78%
Roots	Host-Associated → Plants → Roots	1.85%
Grass	Engineered → Solid Waste → Grass	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.74%
Loam	Environmental → Terrestrial → Soil → Loam	22.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.56%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Composting	Engineered → Solid Waste → Grass → Composting	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.19%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.85%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.93%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.04%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	5.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.63%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Permafrost And Active Layer Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000878	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina	Environmental	Open in IMG/M
3300001565	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina new	Environmental	Open in IMG/M
3300002028	Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_A17	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_06461234	3300000156	Sugar Cane Bagasse Incubating Bioreactor	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSPNRDQRRFEIMLVRRIVSG*
AL9A1W_11717142	3300000878	Permafrost	MIVERIEAVERDTDARDAAKHAETAFRRMGPSAALGERPSNRDLRRFEVMLVRRIVTG*
A35518A_11841662	3300001565	Permafrost	MIVERIKTVERDTDARDAAKHAENAFRRMGPSAALGERPSNRDLRRLEVMLVRRIVTG*
A17_13493541	3300002028	Permafrost And Active Layer Soil	MIVERIEAVERNADARDAAKHAETAFRRMGPSAALGERPSNRDLRRFEVILVRRIVNG*
C688J35102_1198958752	3300002568	Soil	VIVERIGAAERNADARHAAKHAETALRRMGPSAVTGERPSNRDQRRFEVMLVRRIVSG*
Ga0062593_1004230242	3300004114	Soil	VIVERIGAAERNADARHAEKHAETAFRRMGPSAATGERPSNRDQRRFEVMLVRRIVSG*
Ga0062589_1003792932	3300004156	Soil	VIVERIGAAERNADARHAEKHAETAFRRMGPSAATGKRPSNRDQRRFEVMLVRRIVSG*
Ga0066677_103726321	3300005171	Soil	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEVMLVRRIVSG*
Ga0066684_105973402	3300005179	Soil	LIVERIGAAERNADKRHAAKHAETALRRMGPSAATGERSSNRDQRRFEVMLVRRIVSG*
Ga0066678_107639821	3300005181	Soil	IVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSPDRDQRRFEIMLVRRIVSG*
Ga0066671_102799211	3300005184	Soil	MNVVERISAAERNADARQAAKHAENAFRRLGPSAATGERPTARDRRSFERMLERMMAAG*
Ga0070658_106651651	3300005327	Corn Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEIMLVRRIVSG*
Ga0070683_1002816671	3300005329	Corn Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG*
Ga0070682_1001628053	3300005337	Corn Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRIVSG*
Ga0068868_1001104183	3300005338	Miscanthus Rhizosphere	MIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRIVSG*
Ga0070660_1016496761	3300005339	Corn Rhizosphere	RTLIVERIGAAERNADARYAAKHAETALRRMGPSAATGERPSNRDQRRFEVMLVRRIVSG
Ga0070691_104340362	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEIMLVRRIVSG*
Ga0070675_1010988311	3300005354	Miscanthus Rhizosphere	MIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRI
Ga0070673_1017767151	3300005364	Switchgrass Rhizosphere	HAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG*
Ga0070709_109800441	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIVERIGAAERNADARYAAKHAETAFRRMGPSAAMGERPSKRDQRRFEVMLVRRIVDG*
Ga0070714_1004161412	3300005435	Agricultural Soil	VIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG*
Ga0070714_1005346761	3300005435	Agricultural Soil	VIVERIEPAERNADARYAAKHAETAFRRMGPSAGTGERPSERDRRRFEVMLVRRIVNG*
Ga0070713_1004562342	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VIVERIEPAERNADARYAAKHAETAFRRMGPAAGTGERPSERDRRRFEVMLVRRIVNG*
Ga0070713_1022730352	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	IVERIGAAERNADARYAAKHAETAFRRMGPSAAMGERPSKRDQRRFEVMLVRRIVDG*
Ga0070710_100173354	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VIVERIGAAERNADARHAAKHAETALRRMGPSTATGERSAKRDQRRFEVMLVRRIVSG*
Ga0070710_103976591	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VIVERIERAERDVDARHAAKHAETAFRRMGPSARTGERPPNRDQRRFEVMLVRRIVNG*
Ga0070711_1004073312	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIVERIEPAERNADARNAAKHAETAFRRMGPSAGTGERPSKRDQRRFEVMLVRRIVTG*
Ga0070681_103174701	3300005458	Corn Rhizosphere	KHAETALRRMGPSAATGERSANRDQRRFEIMLVRRIVSG*
Ga0070684_1001074361	3300005535	Corn Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFE
Ga0070684_1013960851	3300005535	Corn Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEVMLVRRIVSG*
Ga0068855_1012827351	3300005563	Corn Rhizosphere	LIVERIGAAERNADARYAAKHAETALRRMGPSAATGERPSNRDQRRFEVMLVRRIVSG*
Ga0066705_108924432	3300005569	Soil	KHAETALRRMGPSAATGERSPDRDQRRFEIMLVRRIVSG*
Ga0068857_1002427292	3300005577	Corn Rhizosphere	LIVERIGAAERNAGRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG*
Ga0068852_1000981544	3300005616	Corn Rhizosphere	HAAKHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRIVSG*
Ga0068852_1016951001	3300005616	Corn Rhizosphere	VIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRI
Ga0068860_1003765581	3300005843	Switchgrass Rhizosphere	LIVERIGAAERNADKRHAAKQAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG*
Ga0070712_1005262772	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VIVDRIGAAERNADARRAAKHAETALRRMGPSAATGERSPDRDQRRFEVMLVRRIVSG*
Ga0070712_1005362022	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VIVERIESAERSTDYRHAPKQAETAFQRMGPSAGSGERPPDRDQRRFEVMLVRRIVNG*
Ga0097621_1012616281	3300006237	Miscanthus Rhizosphere	IVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEIMLVRRIVSG*
Ga0074048_117719921	3300006581	Soil	YAAKHAETAFRRMGPSAGTGERPSERDRRRFEVMLVRRIVTG*
Ga0066658_101388652	3300006794	Soil	MIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEVMLVRRIVSG*
Ga0079220_104289622	3300006806	Agricultural Soil	MIVERIRAAERNADARYAAKHAETAFRRMGPSAAMGERPSKRDQRRFEVMLVRRIVDG*
Ga0075433_102767042	3300006852	Populus Rhizosphere	LIVERIGAAERNADRRHGAKHAETARRRMGPSAATGERSPNRDQRRFEIMLVRRIVSG*
Ga0075425_1027264611	3300006854	Populus Rhizosphere	DRRVIVERIGAAERNADARHAEKHAETAFRRMGPSAATGERPSNRDQRRFEVMLVRRIVSG*
Ga0105240_100464175	3300009093	Corn Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFELMLVRRIVSG*
Ga0075423_109803982	3300009162	Populus Rhizosphere	VAGPEQEDRTLIVERIGAAERNADRRHGAKHAETARRRMGPSAATGERSPNRDQRRFEIMLVRRIVSG*
Ga0105248_129386601	3300009177	Switchgrass Rhizosphere	VIGRRGRNRRNRTLIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRIVSG*
Ga0105238_105937632	3300009551	Corn Rhizosphere	IVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG*
Ga0105238_108087511	3300009551	Corn Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEI
Ga0105249_112893371	3300009553	Switchgrass Rhizosphere	KHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRIVSG*
Ga0126318_104397572	3300010152	Soil	VIVERIGAAERNTDARDAAKHAEAAFRRMGPSAATGERPPNRDQRRFEIMLVRRIVSG*
Ga0126318_104407652	3300010152	Soil	MIVERIGAAERNTDARDAAKHAETAFRRMGPSAATGERPPNRDQRRFEIMLVRRIVSG*
Ga0126318_108261202	3300010152	Soil	MIVERIRAAERNADARDAAKHAETAFRRMGPSAAMGDRPSKRDQRRFEVMLVRRIVDG*
Ga0126370_122202021	3300010358	Tropical Forest Soil	VAGPEQEDRTLIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG*
Ga0134125_100510223	3300010371	Terrestrial Soil	VAGPEQEDRTVIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEIMLVRRIVSG*
Ga0134128_125829071	3300010373	Terrestrial Soil	VIVERIGAAERNADKRHAAKQAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG*
Ga0134127_100741473	3300010399	Terrestrial Soil	MIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSPNRDQRRFEIMLVRRIVSG*
Ga0120114_10022694	3300011998	Permafrost	MIVERIEAVERNADARDAAKHAETAFRRMGPSAALGERPSNRDLRRFEVMLVRRIVTG*
Ga0120163_11206512	3300012003	Permafrost	GVTGRRGTNRRVAKMIVERIEAVERDTDARDAAKHAETAFRRMGPSAALGERPSNRDLRRFEVMLVRRIVTG*
Ga0120134_10620731	3300012004	Permafrost	MHKQEGREMIVERIEAVERDTDARDAAKHAETAFRRMGPSAALGERPSNRDLRRFEVILVRRIVNG*
Ga0137379_107586182	3300012209	Vadose Zone Soil	IVERIEAAGRNADARHAAKHAETAYRRMGPSAALGERPKDRDQRRFEVMLVRRIVAG*
Ga0137378_109998902	3300012210	Vadose Zone Soil	MIVERIEAAGRNADARHAAKHAETAFRRMGPSAALGERPKDRD
Ga0134040_12742192	3300012389	Grasslands Soil	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSPDRDQRRFEIMLVRRIVSG*
Ga0164299_104819832	3300012958	Soil	MIVERIEPAERNADARNAAKHAETAFRRMGPSAGTGERPSKRDQRRFEVMLVRRIV
Ga0126369_136954242	3300012971	Tropical Forest Soil	AGPEQEDRTLIVERIGAAERNADRRHAAKHAEIALRRMGPSAATGERSRNRDQRRFEIMLVRRIVSG*
Ga0164308_101439711	3300012985	Soil	ERNADARHAAKHAETALRRMGPSTATGERSAKRDQRRFEVMLVRRIVSG*
Ga0164304_102440192	3300012986	Soil	MIVERIEPAERNADAWNAAKHAETAFRRMGPSAGTGERPSKRDQRRFEVMLVRRIVTG*
Ga0164305_110941842	3300012989	Soil	ERIEPAERNADARNAAKHAETAFRRMGPSAGTGERPSKRDQRRFEVMLVRRIVTG*
Ga0157378_110284711	3300013297	Miscanthus Rhizosphere	MIVERIGAAERNADKRHAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG*
Ga0157372_105609901	3300013307	Corn Rhizosphere	DRRHAAKHAETALRRMGPSAATGERSANRDQRRFELMLVRRIVSG*
Ga0157372_117234942	3300013307	Corn Rhizosphere	DRRHAAKHAETALRRMGPSAATGERSANRDQRRFEIMLVRRIVSG*
Ga0120127_100295442	3300013503	Permafrost	MIVERIKTVERDTDARDAAKHAETAFRRMGPSAALGERPSNRDLRRLEVMLVRRIVTG*
Ga0120181_10299523	3300013766	Permafrost	MIVERIEAVETNADARDAAKHAETAFRRMGPSAALGERPSNRDLRRFEVILVRRIVNG*
Ga0163163_116120091	3300014325	Switchgrass Rhizosphere	VIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEIMLVRRIVSG*
Ga0182008_101106891	3300014497	Rhizosphere	LIVERIGAAERNADARYAAKHAETALRRMGPSAATGERPPNRDQRRFEVMLVRRIVSG*
Ga0167643_10416072	3300015089	Glacier Forefield Soil	MIVERIEVVERDTDARDAAKHAETAFRRMGPSAALGERPSNRDLRRLEVMLVRRIVTG*
Ga0134072_100878272	3300015357	Grasslands Soil	VIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSPDRDQRRFEIMLVRRIVSG*
Ga0193729_12174952	3300019887	Soil	VIVERITPAERNADPRHAAKHPEYAFQRMGPSAGTGERSSERDRRRFEVMLVRRIVNG
Ga0193728_11453482	3300019890	Soil	MIVERIEAVERDTDARDAAKHAETAFRRMGPSAALGERPSNRDLRRFEVMLVRRIVTG
Ga0197907_112429462	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	EQEDRTLIVERIGAAERNADARYAAKHAETALRRMGPSAATGERPPNRDQRRFEVMLVRRIVSG
Ga0206356_104621242	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEIMLVRRIVSG
Ga0206355_10150331	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG
Ga0206354_107713783	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	RTLIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG
Ga0206353_102774012	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	LIVERIGAAERNADARYAAKHAETALRRMGPSAATGERPSNRDQRRFEVMLVRRIVSG
Ga0224712_101206442	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	AAGPEQEDRTLIVERIGAAERNADARYAAKHAETALRRMGPSAATGERPSNRDQRRFEVMLVRRIVSG
Ga0208078_11118952	3300025544	Arctic Peat Soil	EAAERNTDSRHAPKQAETAFLRMGPSARSGERPPDRDQRRFEVMLVRRIVNG
Ga0208219_10840442	3300025625	Arctic Peat Soil	MIVERIETVERDSDARDAAKHAETAFRRMGPSAATGERLTNRDLRRIEVMLVRRIVTG
Ga0207688_106326312	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LIVERIGAAERNADARYAAKHAETALRRMGPSAATGERPPNRDQRRFEVMLVRRIVSG
Ga0207699_104558162	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MIVERIRAAERNADARYAAKHAETAFRRMGPSAAMGERPSKRDQRRFEVMLVRRIVDG
Ga0207654_101987593	3300025911	Corn Rhizosphere	DRTMIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRIVS
Ga0207654_114070361	3300025911	Corn Rhizosphere	MIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEIMLVRRI
Ga0207663_103192792	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MIVERIEPAERNADARNAAKHAETAFRRMGPSAGTGERPSKRDQRRFEVMLVRRIVTG
Ga0207657_106948542	3300025919	Corn Rhizosphere	HRAAGPEQEDRTLIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEIMLVRRIVSG
Ga0207652_105684142	3300025921	Corn Rhizosphere	MIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEIMLVRRIVSG
Ga0207687_100201833	3300025927	Miscanthus Rhizosphere	MIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRIVSG
Ga0207700_103338352	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VIVERIEPAERNADARYAAKHAETAFRRMGPAAGTGERPSERDRRRFEVMLVRRIVNG
Ga0207644_101865523	3300025931	Switchgrass Rhizosphere	GPEQEDRTVIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRIVSG
Ga0207665_101906683	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MIVERIGAAERNADRRHAAKHAETALRRMGPSAAMGERPSKRDQRRFEVMLVRRIVDG
Ga0207711_101522473	3300025941	Switchgrass Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEIMLVRRIVSG
Ga0207661_102160282	3300025944	Corn Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSANRDQRRFEVMLVRRIVSG
Ga0207667_112520061	3300025949	Corn Rhizosphere	IVERIGAAERNADARYAAKHAETALRRMGPSAATGERPSNRDQRRFEVMLVRRIVSG
Ga0207677_100954113	3300026023	Miscanthus Rhizosphere	MIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG
Ga0207703_121914181	3300026035	Switchgrass Rhizosphere	LIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEI
Ga0207674_106817552	3300026116	Corn Rhizosphere	LIVERIGAAERNAGRRHAAKHAETALRRMGPSAATGERSSNRDQRRFEIMLVRRIVSG
Ga0209153_11142062	3300026312	Soil	MNVVERISAAERNADARQAAKHAENAFRRLGPSAATGERPTARDRRSFERMLERMMAAG
Ga0209152_104177072	3300026325	Soil	EQEDRTVIVERIGAAERNADRRHAAKHAETALRRMGPSAATGERSSSRDQRRFEVMLVRRIVSG
Ga0308175_1008637012	3300031938	Soil	VIVERIGAAERNADARHAAKHAETALRRMGPFAATGERPSNRDQRRFEVMLVRRIVSG
Ga0335075_107552562	3300032896	Soil	MIVERIGAAERNADARDAAKHAETAFRRMGPSAAMGKRPSKRDQRRFEVMLVRRIVDG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090708

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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