Metagenome / Metatranscriptome Family F090700

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090700
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	68 residues
Representative Sequence	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFNESYAKAGREHVVAALANVASVIGAKA
Number of Associated Samples	65
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.44 %
% of genes near scaffold ends (potentially truncated)	42.59 %
% of genes from short scaffolds (< 2000 bps)	94.44 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (82.407 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.407 % of family members)
Environment Ontology (ENVO)	Unclassified (56.481 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.593 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.88% β-sheet: 24.73% Coil/Unstructured: 48.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.104.1.4: PH0223-like	d2ddza1	2ddz	0.67436
c.119.1.0: automated matches	d3nyia_	3nyi	0.66907
c.119.1.0: automated matches	d6alwa_	6alw	0.64688
c.119.1.0: automated matches	d3pl5a_	3pl5	0.64422
d.250.1.1: Aminomethyltransferase folate-binding domain	d1v5va2	1v5v	0.64232

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01722	BolA	6.48
PF03457	HA	1.85
PF04224	DUF417	1.85
PF02627	CMD	0.93
PF04107	GCS2	0.93
PF08734	GYD	0.93
PF00211	Guanylate_cyc	0.93
PF13936	HTH_38	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG3059	Reactive chlorine resistance protein RclC/YkgB, DUF417 family	Defense mechanisms [V]	1.85
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.93
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.93
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.93
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
All Organisms	root	All Organisms	17.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
cellular organisms	root	All Organisms → cellular organisms	17.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.81 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12.96 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.33 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.78 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.93 %
Brucellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae	0.93 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.78 %
Pseudochrobactrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Pseudochrobactrum	0.93 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.93 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.93 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.93 %
Pseudochrobactrum asaccharolyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Pseudochrobactrum → Pseudochrobactrum asaccharolyticum	0.93 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	0.93 %
Pseudochrobactrum asaccharolyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Pseudochrobactrum → Pseudochrobactrum asaccharolyticum	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.41 %
Bacteroides faecis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides faecis	0.93 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.93 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.93 %
Pseudochrobactrum asaccharolyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Pseudochrobactrum → Pseudochrobactrum asaccharolyticum	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1022799	Not Available	989	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10026786	Not Available	1567	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1071260	Not Available	613	Open in IMG/M
3300005332\|Ga0066388_102283852	Not Available	978	Open in IMG/M
3300005332\|Ga0066388_102647081	Not Available	914	Open in IMG/M
3300005332\|Ga0066388_104250905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	730	Open in IMG/M
3300005332\|Ga0066388_105153913	Not Available	663	Open in IMG/M
3300005332\|Ga0066388_105247825	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides faecis	657	Open in IMG/M
3300005332\|Ga0066388_107292870	Not Available	555	Open in IMG/M
3300005363\|Ga0008090_15458319	Not Available	1106	Open in IMG/M
3300005764\|Ga0066903_100166397	All Organisms → cellular organisms → Bacteria	3212	Open in IMG/M
3300005764\|Ga0066903_101312865	Not Available	1352	Open in IMG/M
3300005764\|Ga0066903_106338570	Not Available	617	Open in IMG/M
3300005764\|Ga0066903_107534938	Not Available	561	Open in IMG/M
3300006041\|Ga0075023_100191617	Not Available	783	Open in IMG/M
3300006175\|Ga0070712_100902454	Not Available	762	Open in IMG/M
3300010048\|Ga0126373_10706422	Not Available	1067	Open in IMG/M
3300010358\|Ga0126370_10064804	Not Available	2389	Open in IMG/M
3300010358\|Ga0126370_10417904	Not Available	1107	Open in IMG/M
3300010359\|Ga0126376_10168480	Not Available	1778	Open in IMG/M
3300010359\|Ga0126376_10327240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1347	Open in IMG/M
3300010360\|Ga0126372_10194939	Not Available	1680	Open in IMG/M
3300010361\|Ga0126378_10317446	Not Available	1664	Open in IMG/M
3300010361\|Ga0126378_12538038	Not Available	585	Open in IMG/M
3300010366\|Ga0126379_11102434	Not Available	900	Open in IMG/M
3300010376\|Ga0126381_102175291	Not Available	798	Open in IMG/M
3300010376\|Ga0126381_102185901	Not Available	796	Open in IMG/M
3300010376\|Ga0126381_103948172	Not Available	578	Open in IMG/M
3300012096\|Ga0137389_11362433	Not Available	604	Open in IMG/M
3300012201\|Ga0137365_10924368	Not Available	636	Open in IMG/M
3300012209\|Ga0137379_10813693	Not Available	839	Open in IMG/M
3300012971\|Ga0126369_11120395	Not Available	876	Open in IMG/M
3300012971\|Ga0126369_11409038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	787	Open in IMG/M
3300012971\|Ga0126369_11969608	Not Available	672	Open in IMG/M
3300016270\|Ga0182036_10654798	Not Available	847	Open in IMG/M
3300016270\|Ga0182036_10821136	Not Available	758	Open in IMG/M
3300016294\|Ga0182041_11510562	Not Available	618	Open in IMG/M
3300016341\|Ga0182035_11272932	Not Available	658	Open in IMG/M
3300016341\|Ga0182035_11749187	Not Available	562	Open in IMG/M
3300016341\|Ga0182035_12188789	Not Available	501	Open in IMG/M
3300016357\|Ga0182032_10997978	Not Available	715	Open in IMG/M
3300016371\|Ga0182034_10921581	Not Available	752	Open in IMG/M
3300016371\|Ga0182034_11383339	Not Available	615	Open in IMG/M
3300016371\|Ga0182034_11936860	Not Available	520	Open in IMG/M
3300016404\|Ga0182037_10375994	Not Available	1164	Open in IMG/M
3300016404\|Ga0182037_10789950	Not Available	818	Open in IMG/M
3300016404\|Ga0182037_12020659	Not Available	518	Open in IMG/M
3300016445\|Ga0182038_10243313	All Organisms → cellular organisms → Bacteria → Proteobacteria	1442	Open in IMG/M
3300016445\|Ga0182038_11057550	Not Available	720	Open in IMG/M
3300016445\|Ga0182038_11515251	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300016445\|Ga0182038_11551481	Not Available	595	Open in IMG/M
3300017823\|Ga0187818_10086249	Not Available	1355	Open in IMG/M
3300021560\|Ga0126371_10355557	Not Available	1601	Open in IMG/M
3300021560\|Ga0126371_11343008	Not Available	847	Open in IMG/M
3300021560\|Ga0126371_12109352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300026819\|Ga0207765_118375	Not Available	544	Open in IMG/M
3300026835\|Ga0207782_110051	Not Available	769	Open in IMG/M
3300026889\|Ga0207745_1008546	Not Available	996	Open in IMG/M
3300027090\|Ga0208604_1012421	Not Available	810	Open in IMG/M
3300027680\|Ga0207826_1080566	Not Available	897	Open in IMG/M
3300027874\|Ga0209465_10675264	Not Available	508	Open in IMG/M
3300027910\|Ga0209583_10284583	Not Available	744	Open in IMG/M
3300031446\|Ga0170820_13748136	Not Available	892	Open in IMG/M
3300031545\|Ga0318541_10160652	Not Available	1236	Open in IMG/M
3300031545\|Ga0318541_10649842	Not Available	589	Open in IMG/M
3300031546\|Ga0318538_10266315	Not Available	921	Open in IMG/M
3300031573\|Ga0310915_10130401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1724	Open in IMG/M
3300031573\|Ga0310915_10173360	Not Available	1500	Open in IMG/M
3300031573\|Ga0310915_10430781	Not Available	937	Open in IMG/M
3300031573\|Ga0310915_10694145	Not Available	719	Open in IMG/M
3300031668\|Ga0318542_10498641	Not Available	633	Open in IMG/M
3300031719\|Ga0306917_11329805	Not Available	555	Open in IMG/M
3300031719\|Ga0306917_11401431	Not Available	539	Open in IMG/M
3300031736\|Ga0318501_10183323	Not Available	1090	Open in IMG/M
3300031744\|Ga0306918_10703927	Not Available	790	Open in IMG/M
3300031744\|Ga0306918_10738825	Not Available	770	Open in IMG/M
3300031744\|Ga0306918_11292514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300031768\|Ga0318509_10491906	Not Available	685	Open in IMG/M
3300031796\|Ga0318576_10268230	Not Available	806	Open in IMG/M
3300031821\|Ga0318567_10311644	Not Available	888	Open in IMG/M
3300031833\|Ga0310917_10468837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300031879\|Ga0306919_10333177	Not Available	1157	Open in IMG/M
3300031890\|Ga0306925_10035569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5122	Open in IMG/M
3300031890\|Ga0306925_10450436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1375	Open in IMG/M
3300031894\|Ga0318522_10310349	Not Available	598	Open in IMG/M
3300031910\|Ga0306923_12322098	Not Available	534	Open in IMG/M
3300031912\|Ga0306921_11741912	Not Available	672	Open in IMG/M
3300031912\|Ga0306921_12038216	Not Available	610	Open in IMG/M
3300031942\|Ga0310916_10509014	Not Available	1025	Open in IMG/M
3300031945\|Ga0310913_10073104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2276	Open in IMG/M
3300031945\|Ga0310913_10126705	Not Available	1748	Open in IMG/M
3300031947\|Ga0310909_11189043	Not Available	617	Open in IMG/M
3300031954\|Ga0306926_10239339	All Organisms → cellular organisms → Bacteria → Proteobacteria	2250	Open in IMG/M
3300032001\|Ga0306922_10361924	Not Available	1555	Open in IMG/M
3300032025\|Ga0318507_10324731	Not Available	670	Open in IMG/M
3300032035\|Ga0310911_10188138	Not Available	1171	Open in IMG/M
3300032041\|Ga0318549_10466097	Not Available	569	Open in IMG/M
3300032041\|Ga0318549_10577539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	505	Open in IMG/M
3300032042\|Ga0318545_10341688	Not Available	539	Open in IMG/M
3300032059\|Ga0318533_10252041	Not Available	1274	Open in IMG/M
3300032059\|Ga0318533_10389131	Not Available	1018	Open in IMG/M
3300032059\|Ga0318533_10389269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1017	Open in IMG/M
3300032076\|Ga0306924_10170973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Pseudochrobactrum → Pseudochrobactrum asaccharolyticum	2493	Open in IMG/M
3300032076\|Ga0306924_10938638	Not Available	954	Open in IMG/M
3300032076\|Ga0306924_11210261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	817	Open in IMG/M
3300032180\|Ga0307471_102555338	Not Available	647	Open in IMG/M
3300032261\|Ga0306920_102045703	Not Available	801	Open in IMG/M
3300032261\|Ga0306920_103402129	Not Available	591	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.22%
Aquatic	Environmental → Aquatic	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.22%
Sediment	Environmental → Aquatic → Sediment	1.85%
Freshwater	Environmental → Aquatic → Freshwater	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.48%
Loam	Environmental → Terrestrial → Soil → Loam	15.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	61.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026819	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 59 (SPAdes)	Environmental	Open in IMG/M
3300026835	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 60 (SPAdes)	Environmental	Open in IMG/M
3300026889	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 57 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10227991	3300000580	Forest Soil	AIQSPRTKASVRATKMHNWRVGSVGTVSGEGFWGVGFVLYDETGKPCLTFGYFNESHAKAGREHVVAALANAASVISAKV*
AF_2010_repII_A1DRAFT_100267863	3300000597	Forest Soil	MHNWRVGSVGTVSGEGFWGVGFVLYDETGKPCLTFGYFNESHAKAGREHVVAALANAASVISAKA*
AF_2010_repII_A100DRAFT_10712602	3300000655	Forest Soil	ASVRATKMHNWRVGSVGTVSGEGFWGVGFVLYDETGKPCLTFGYFNESHAKAGREHVVAALANAASVISAKA*
Ga0066388_1022838521	3300005332	Tropical Forest Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESHAKAGREHVLAALANAASVTGAKAN*
Ga0066388_1026470812	3300005332	Tropical Forest Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVIGAKAK*
Ga0066388_1042509051	3300005332	Tropical Forest Soil	VGPVQTVSGGSFWGVGFVLYDETGKPCLTFGYFNESHAKAGREYVLAALANAASVISAKA
Ga0066388_1051539132	3300005332	Tropical Forest Soil	GTASLLSGGRATKMHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVTGARQPQA*
Ga0066388_1052478251	3300005332	Tropical Forest Soil	MHKWRVGPVQTVSGGCFWGSGFVLYDETGKPCVTFGYFNESYAKAGHEHVVAALANAASVISAKA*
Ga0066388_1072928702	3300005332	Tropical Forest Soil	GTASLLSGGRATKMHNWRVGSVGSVSGENFWGVGFVLYDETGKPCLTFGYFNESSAKAGRDHVVAALANAASVIGAKANQRRS*
Ga0008090_154583192	3300005363	Tropical Rainforest Soil	MHNWRVGSVGTVGGEGFWGVGFVLYDETGKPCLTFGYFNESHAKAGREHVVAALANAASVISAKA*
Ga0066903_1001663972	3300005764	Tropical Forest Soil	MHKWRVGPVQTVSGGRFWGVGFVLYDEDGRPCVTFGYFNESHAKAGREHVVAALANAASVISAKT*
Ga0066903_1013128653	3300005764	Tropical Forest Soil	MHKWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFNESYAKAGHEHVVAALANSASVISAKA*
Ga0066903_1063385701	3300005764	Tropical Forest Soil	MHNWHVGPVGSVGGERFWGTGFVLYDETGKPCLTFGYFNESHAKAGREHVVAALANAASVISAKA*
Ga0066903_1075349382	3300005764	Tropical Forest Soil	MHNSRVGSVGTVSGEGFWGVGFVLCDETGKPCLTFGYFNESHAKAGREHVVAALANAASVISAKA*
Ga0075023_1001916172	3300006041	Watersheds	TQRRATEILFASGRATKMQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGSFSESYAKAGREHVGAALANAASVIGVVTTGTI*
Ga0070712_1009024542	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHVVAALANAASVIGVVTTGTI*
Ga0126373_107064222	3300010048	Tropical Forest Soil	MHKWRVGSVGSVSGERFWGSGFVLYDETGKPCATFGYFNESFAKAGREHVVAALANVASVIGAKRT*
Ga0126370_100648045	3300010358	Tropical Forest Soil	MHKWRVGPVGSVSGERFWGSGFVLYDETGKPCATFGYFNESFAKAGREHVVAALANVASVIGAKGT*
Ga0126370_104179042	3300010358	Tropical Forest Soil	MHKWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFNESYAKVGREHVVAALANAASVISAKA*
Ga0126376_101684804	3300010359	Tropical Forest Soil	MHKWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFNESYAKAGHEHVVAALANAASVISAKA*
Ga0126376_103272403	3300010359	Tropical Forest Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVIGAKAN*
Ga0126372_101949392	3300010360	Tropical Forest Soil	MHKWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHIVAALANAASVIGVVPTGTI*
Ga0126378_103174463	3300010361	Tropical Forest Soil	MGNWRVGPIGTVGGEGFWGCGFVLYDRTGKPCVTFGYATEDNAKAGREHIAAALANIATVTGAKHT*
Ga0126378_125380382	3300010361	Tropical Forest Soil	MHNWRVGSVGSVSGENFWGVGFVLYDETGKPCLTFGYFNESSAKAGREHVVAALANAASVIGAKAN*
Ga0126379_111024343	3300010366	Tropical Forest Soil	MHKWRVGPVGSVSGERFWGSGFVLYDETGKPCATFGYFNESFAKAAREHVVAALANVASVIGAKGT*
Ga0126381_1021752912	3300010376	Tropical Forest Soil	MHKWRVGSVGSVSGEKFWGVGFVLYDETGTPCLTFGYFNESHAKAGREHVVAALADAASIIGAKQT*
Ga0126381_1021859011	3300010376	Tropical Forest Soil	TTKMHNWRVGSVGSVSGENFWGVGFVLYDETGKPCLTFGYFNKNSAKAGREHVVAALANAASVIGAKANQRRS*
Ga0126381_1039481721	3300010376	Tropical Forest Soil	MGNWRVGPIGTVGGEGFWGCGFVLYDRTGKPCVTFGYATEDNAKAGREHIAAALANIATVIGAKHT*
Ga0137389_113624331	3300012096	Vadose Zone Soil	GSFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHVVAALANAASVIGVVTTGTI*
Ga0137365_109243681	3300012201	Vadose Zone Soil	MPEFEFSVHPGGSFWGSGFVLCDETGKPCVTFGYFSESYAKAGREHVVVALANAASVIGVVTTGTI*
Ga0137379_108136931	3300012209	Vadose Zone Soil	MIFGKDRATKMQNWRVGPVQTVSGGSFWGSGFVLYDETGEPCVTFGYFSESYAKAGREHVVVALANAASVIGVVTTGTI*
Ga0126369_111203951	3300012971	Tropical Forest Soil	MCVWEGDMHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVIGAKAN*
Ga0126369_114090381	3300012971	Tropical Forest Soil	MHNWRIGPVGSVSGERFWGTGFVLYDETGKPCVTFGYFNESYANAGRAHVEAALANAASVISAKA*
Ga0126369_119696082	3300012971	Tropical Forest Soil	MHKWRIGPVQTVSGGSFWGSGFVLYDEDGRPCVTFGYFNESHAKAGREHVVAALANAASIISAKT*
Ga0182036_106547982	3300016270	Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVIGAKAT
Ga0182036_108211361	3300016270	Soil	MENWRVGPVQTVSGGSFWGSGFVLYDENGKPCVTFGYFNESYAKVGREHVVAALANAASVISAKA
Ga0182041_115105622	3300016294	Soil	MHNWRVGSVGSVSGENFWGVGFILYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVIGVKAN
Ga0182035_112729322	3300016341	Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASIIGVKQT
Ga0182035_117491871	3300016341	Soil	MHKWRVGPIGSVSGKRFWGCGFVLYDETGKPCATFGYFNESHAKAGREHVVAALANVASVASAKADLAPMRLRH
Ga0182035_121887891	3300016341	Soil	MHNWRVGSVGSVSGENFWGVGFILYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVIGVKA
Ga0182032_109979781	3300016357	Soil	MQNWRVGPVQTVSGGSFWGTGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALANAASVIA
Ga0182034_109215811	3300016371	Soil	MHKWRVGPVQTVSGGSFWGSGFVLYDENGKPCVTFGYFNESYAKVGREHVVAALANAASVISAKP
Ga0182034_113833391	3300016371	Soil	SEILFASGRATKMQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHVVAALANAASVIGVVTTGTI
Ga0182034_119368601	3300016371	Soil	MQNWRVGPVQTVSGGSFWGTGFVLYDETGKPCVTFGYFSESHAKAGREYVEAAL
Ga0182037_103759943	3300016404	Soil	GGSFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHIVAALANAASVIGVVPTGTI
Ga0182037_107899502	3300016404	Soil	RVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFNESYAKAGHEHVVAALANAASVISAK
Ga0182037_120206591	3300016404	Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHIVAALANAASVIGAKAN
Ga0182038_102433133	3300016445	Soil	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALANAASVIAAR
Ga0182038_110575501	3300016445	Soil	RDLLAKLLCASGRATKMHKWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFNESYAKAGHEHVVAALANAASVISAKA
Ga0182038_115152511	3300016445	Soil	TEMHKWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASIIGVKQT
Ga0182038_115514811	3300016445	Soil	MQNWRVGPVQTVSGGSFWGTGFVLYDEAGKPCVTFGYFSESHAKAGREYVEAALANA
Ga0187818_100862492	3300017823	Freshwater Sediment	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHVVAALANAASVIGVVTTGTI
Ga0126371_103555572	3300021560	Tropical Forest Soil	MHKWRVGSVGSVSGEKFWGVGFVLYDETGTPCLTFGYFNEGHAKAGREHVVAAIANAASIIGAKQT
Ga0126371_113430081	3300021560	Tropical Forest Soil	MHNWHVGPVGSVGGERFWGTGFVLYDETGKPCLTFGYFNESHAKAGREHVVAALANAASVISAKA
Ga0126371_121093521	3300021560	Tropical Forest Soil	GPVGSVSGERFWGSGFVLYDETGKPCATFGYFNESFAKAAREHVVAALANVASVIGAKGT
Ga0207765_1183751	3300026819	Tropical Forest Soil	GRATEMHKWRVGPVGSVSGKRFWGCGFVLYDETGKPCATFGYFNESHAKVGREHVVAALANVASVTSAKAVLAPMRLRPQ
Ga0207782_1100512	3300026835	Tropical Forest Soil	MHKWRVGPVGSVSGKRFWGCGFVLYDETGKPCATFGYFNESHAKVGREHVVAALANVASVTSAKAVLAPMRLRH
Ga0207745_10085461	3300026889	Tropical Forest Soil	MHKWRVGPVGSVSGKRFWGCGFVLYDETGKPCATFGYFNESHAKVGREHVVAALANVASVIGAKGT
Ga0208604_10124211	3300027090	Forest Soil	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHVVAALANAASVIGVVSTGTI
Ga0207826_10805661	3300027680	Tropical Forest Soil	MHKWRVGPVGSVSGKRFWGCGFVLYDETGKPCATFGYFNESHAKVGREHVVAALANVASVTSAKAVLAPMRLRPQ
Ga0209465_106752642	3300027874	Tropical Forest Soil	MHNWRIGPVGSVSGERFWGTGFVLYDETGKPCVTFGYFNESYANAGRAHVEAALANAASVIGVVPTGTI
Ga0209583_102845831	3300027910	Watersheds	ASRRATKMQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGSFSESYAKAGREHVGAALANAASVIGVVTTGTI
Ga0170820_137481363	3300031446	Forest Soil	HNWRVGPVQTVSGGSFWGSGFVLYDETGKPSVTFGYFSESHAKAGREHVVAALENAASVIGVVATGTI
Ga0318541_101606523	3300031545	Soil	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALANAASVIAAKRT
Ga0318541_106498422	3300031545	Soil	SYHVRPGGRPTEMHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSARAGREHVVAALANAASVIGAKAN
Ga0318538_102663151	3300031546	Soil	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALANAASVIASKRT
Ga0310915_101304013	3300031573	Soil	MQNWRVGPVQTVSGGSFWGTGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALENAASVIAAR
Ga0310915_101733601	3300031573	Soil	GGGFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHIVAALANAASVIGVVPTGTI
Ga0310915_104307813	3300031573	Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSARAGREHVVAALANAASVIGAKAN
Ga0310915_106941452	3300031573	Soil	MHKWRVGPVQTVSGGSFWGSGFVLYDENGKPCVTFGYFNESYAKVGREHVVAALANAASVISAKA
Ga0318542_104986412	3300031668	Soil	VSGGGFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHIVAALANAASVIGVVPTGTI
Ga0306917_113298051	3300031719	Soil	MHKWRVGPVGSVSGERFWGSGFVLYDETGEPCVTFGYFNESYAKAGREHVVAALANVASVIGAKA
Ga0306917_114014311	3300031719	Soil	EMHNWRIGSVGSVSGENFWGVGFVLYDETGKPCVTFGYSTEETAKAGREHIAAALANVVSVIGAKA
Ga0318501_101833233	3300031736	Soil	MHKWRIGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALANAASVIAAKRT
Ga0306918_107039271	3300031744	Soil	MQNWRVGPVQTVSGGGFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHIVAALANAASVIGVVPTGTI
Ga0306918_107388251	3300031744	Soil	MHNWRVGSVGTVSGEGFWGVGFVLYDETGKPCLKFGYFNESNAKAGREHVVAALANAASVISAKA
Ga0306918_112925141	3300031744	Soil	MHNWRVGPVGSVSGENFWGVGFVLYDEIGKPCLKFGYFNESSARAGREHVVAALANAASVIGAKAN
Ga0318509_104919062	3300031768	Soil	VGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSARAGREHVVAALANAASVIIAKAN
Ga0318576_102682302	3300031796	Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVIGAKAN
Ga0318567_103116441	3300031821	Soil	MHKWRVGPVGSVSGERFWGSGFVLYDETGKPCATFGYFNESFAKAGREHVVAALANVASV
Ga0310917_104688371	3300031833	Soil	MHNWRVGPVGSVSGENFWGVGFVLYDEIGKPCLKFGYFNESSARAGREHVVAALANA
Ga0306919_103331771	3300031879	Soil	MHNWRVGSVGSVSGENFWGVGFILYDEIGKPCLTFGYFNESSAKAGREHVVAALAN
Ga0306925_100355694	3300031890	Soil	MQNWRVGPVQTVSGGSFWGTGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALANAASVIAAR
Ga0306925_104504361	3300031890	Soil	MSKLQNWRVGPVQSVTPGIGFVLYDETGKPCVTFGYLTEETAKAGREHIAAALANVVSVHMQHEEKDFPAHQ
Ga0318522_103103491	3300031894	Soil	MHKWRVGPVGSVSGERFWGSGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALANAASVIAAKRT
Ga0306923_123220981	3300031910	Soil	RDLLAKLLCASGRATKMHKWRVGPVQTVSGGSFWGSGFVLYDENGKPCVTFGYFNESYAKVGREHVVAALANAASVISAKA
Ga0306921_117419122	3300031912	Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVIGAKA
Ga0306921_120382162	3300031912	Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVTGARQPQA
Ga0310916_105090142	3300031942	Soil	MHKWRIGPVQTVSGGSFWGSGFVLYDENGKPCVTFGYFNESYAKVGREHVVAALANAASVISAKA
Ga0310913_100731044	3300031945	Soil	MQNWRVGPVQTVSGGSFWGTGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALENAASV
Ga0310913_101267053	3300031945	Soil	MQNWRVGPVQTVSGGGFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHVVAALANAASVIGVVPTGTI
Ga0310909_111890432	3300031947	Soil	PSLLSQALVGATKMHKWRVGPVGSVSGERFWGSGFVLYDETGEPCVTFGYFNESYAKAGREHVVAALANVASVIGAKA
Ga0306926_102393394	3300031954	Soil	SQALVGATKMHKWRVGPVGSVSGERFWGSGFVLYDETGEPCVTFGYFNESYAKAGREHVVAALANVASVIGAKA
Ga0306922_103619241	3300032001	Soil	SLLSGCGRATEMHKWRVGPVGSVSGKRFWGCGFVLYDETGKPCATFGYFNESHAKVGREHVVAALANVASVTSAKAVLAPMRLRPQ
Ga0318507_103247311	3300032025	Soil	MHKWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTLGYFSESYAKAGREHVVAALANAASVIGVVTTGTI
Ga0310911_101881381	3300032035	Soil	NSSTQRRASEILFASGRATKMQNWRVGPVQTVSGGGFWGSGFVLYDETGKPCVTFGYFSESYAKAGREHIVAALANAASVIGVVPTGTI
Ga0318549_104660972	3300032041	Soil	MHNWRVGSVGSVSGENFWGVGFVLYDEIGKPCLTFGYFNESSAKAGREHVVAALANAASVIGVKAN
Ga0318549_105775391	3300032041	Soil	IIASRRATKMQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALANAASVIAAR
Ga0318545_103416881	3300032042	Soil	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFNESYAKAGREHVVAALANVASVIGAKA
Ga0318533_102520411	3300032059	Soil	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESHAKAGREYVEAALANAASVIAAKR
Ga0318533_103891312	3300032059	Soil	MQNWRVGPVQTVSGGSFWGTGFVLYDETGKPCVTFGYFSESYAKAGREHIVAALANAASVIGVVPTGTI
Ga0318533_103892693	3300032059	Soil	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFNESYAKAGHEHVVAALANAASVISAKA
Ga0306924_101709734	3300032076	Soil	MHKWRVGPVGSVSGERFWGSGFVLYDETGEPCVTFGYFNESYAKAGREHVVAALANVASVIGAKGT
Ga0306924_109386381	3300032076	Soil	DLLAKLLCASGRATKMHKWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFNESYAKAGHEHVVAALANAASVISAKA
Ga0306924_112102611	3300032076	Soil	MHKWRVGPIGSVSGKRFWGCGFVLYDETGKPCATFGYFNESHAKAGREHVVAALANVASVASAKADLAPMRLRPQ
Ga0307471_1025553381	3300032180	Hardwood Forest Soil	VRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSEQSAVLAELAQRAVQRLMSENYAKAGREHVVAALENAASVIGVVATGTI
Ga0306920_1020457031	3300032261	Soil	MQNWRVGPVQTVSGGSFWGSGFVLYDETGKPCVTFGYFSESDAKAGREYVEAALANAASVIASKRT
Ga0306920_1034021291	3300032261	Soil	LSGGRTTKMHNWRVGSVGSVSGENFWGVGFVLYDETGKPCLTFGYFNESHAKAGREYVLAALANAASVISAKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090700

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences