NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F090695

Metagenome / Metatranscriptome Family F090695

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F090695
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 77 residues
Representative Sequence MWLEKLASGVLRVLTPLGPRYLKPSFAQRLYLLWIFRNFQTLPVKVLTSRQRRLIESMCAADRFVSLGIGVDDAPL
Number of Associated Samples 102
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 72.73 %
% of genes near scaffold ends (potentially truncated) 20.37 %
% of genes from short scaffolds (< 2000 bps) 18.52 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (81.481 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(11.111 % of family members)
Environment Ontology (ENVO) Unclassified
(26.852 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.778 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 31.73%    β-sheet: 10.58%    Coil/Unstructured: 57.69%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF01479S4 40.74
PF00849PseudoU_synth_2 9.26
PF07238PilZ 3.70
PF01715IPPT 2.78
PF01745IPT 0.93
PF00478IMPDH 0.93
PF00581Rhodanese 0.93
PF08281Sigma70_r4_2 0.93
PF04185Phosphoesterase 0.93
PF00005ABC_tran 0.93
PF08352oligo_HPY 0.93
PF13298LigD_N 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG0564Pseudouridine synthase RluA, 23S rRNA- or tRNA-specificTranslation, ribosomal structure and biogenesis [J] 9.26
COG1187Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605Translation, ribosomal structure and biogenesis [J] 9.26
COG0324tRNA A37 N6-isopentenylltransferase MiaATranslation, ribosomal structure and biogenesis [J] 2.78
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.93


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A81.48 %
All OrganismsrootAll Organisms18.52 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105572912All Organisms → cellular organisms → Bacteria → Acidobacteria622Open in IMG/M
3300005341|Ga0070691_10048811All Organisms → cellular organisms → Bacteria2015Open in IMG/M
3300005614|Ga0068856_102495603All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300005616|Ga0068852_100735434All Organisms → cellular organisms → Bacteria → Acidobacteria998Open in IMG/M
3300006046|Ga0066652_102094801All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300006175|Ga0070712_101081440Not Available696Open in IMG/M
3300006854|Ga0075425_103111624All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300010049|Ga0123356_14025325All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300010376|Ga0126381_104265011All Organisms → cellular organisms → Bacteria → Acidobacteria554Open in IMG/M
3300012209|Ga0137379_10528661All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300012977|Ga0134087_10391469All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300012988|Ga0164306_11366978All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300014166|Ga0134079_10060914All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1353Open in IMG/M
3300017995|Ga0187816_10232821All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300019996|Ga0193693_1046261All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300020580|Ga0210403_11345775All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300021170|Ga0210400_10344439All Organisms → cellular organisms → Bacteria → Acidobacteria1227Open in IMG/M
3300021384|Ga0213876_10159700Not Available1199Open in IMG/M
3300027591|Ga0209733_1114065All Organisms → cellular organisms → Bacteria → Acidobacteria675Open in IMG/M
3300027903|Ga0209488_10807747All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300031231|Ga0170824_116601120All Organisms → cellular organisms → Bacteria → Acidobacteria784Open in IMG/M
3300032261|Ga0306920_100020252All Organisms → cellular organisms → Bacteria9260Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.11%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.48%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.63%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.70%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.70%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.70%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.78%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.85%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.85%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.85%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.93%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.93%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.93%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000878Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005532Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010049Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3Host-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300012010Permafrost microbial communities from Nunavut, Canada - A7_35cm_12MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019996Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10557291233300000364SoilMWLEKLSSGVLRVLTPLGPRYLKPSFAQRLYLLWIFRNFQTLPVKVLTSRQSRLVESMCA
AL9A1W_125810823300000878PermafrostMWLEKLASGVLRVLTPLGPRYLKPSLAQRLYLLWVFRNFPTLPVKVLTTRQQRLVESMCANNRFVSFGVGVDDAPLL
JGI11615J12901_1020129933300000953SoilMELEKLFWGVLRVQTPLGPRYLKPTLIQRTYLMWVFRNFSALPVKVLSHRQQRLIEAMCEQNRFISLGMGGDDRPLIGTLEQRPPITPAPRR
C688J35102_11806702813300002568SoilMWLEKLASGVLRVLTPLGPRYLKPSLGQKLYLLWVFRNFQTLPFKVLSSRQQRLVESMCEENRFVSMGIGVDDAPL
JGI25389J43894_105457613300002916Grasslands SoilMWLEKLSSGVLRVLTPLGPRYLNPSLAQRLYLIWVFRHFETLPVKVLSSRQRRMIEFMCANNQFVSLDM
Ga0063455_10093809123300004153SoilMWLEKLFSGVLRVLTPLGPRYLNPSFVQRLYLLWVFRHFENLPVKVLSSRQRRMIETMCANNQFVSLDLAV
Ga0066677_1078128523300005171SoilMWLEKLASGVLRVLTPLGPRYLQPSFAQRLYLLWVFRNFQTLPVKVLTSRQRRVVESMWAADQFVSFGAGVDDA
Ga0066680_1084389123300005174SoilMWLEKLFSGVLRVLTPLGPRYLKPTFIQRLYLLWVFRNFPSLPVKVLTTRQGRLIESMSADDKFISFGVGLDDAPLLGTLEQRPPIPD
Ga0068869_10179811113300005334Miscanthus RhizosphereMWTEKLLSGVLRVLTPLGPRYLKPSIRQRLYLLWVFRNFQTLPFKVLSARQQRLIEGMCDENRFVAWGV
Ga0070691_1004881133300005341Corn, Switchgrass And Miscanthus RhizosphereMWTEKLLSGVLRVLTPLGPLYLKPSIRQRLYLLWVFRNFQTLPFKVLSARQQRLIEGMCDEN
Ga0070714_10150004123300005435Agricultural SoilMWLEKLSSGVLRVLTPLGPRYLNPSFTQRLYLMWVFRHFETLPVKVLSSRQSRMIEMMCANNQFVSLDLAVDYA
Ga0070713_10115554213300005436Corn, Switchgrass And Miscanthus RhizosphereMWLEKLFAGVLRVHTPLGPRYLKPSFRQRLYLLWVFRNFQTLPLKVLSHRQQNLIEAMCDENRFVSW
Ga0070710_1099620213300005437Corn, Switchgrass And Miscanthus RhizosphereMWLEKLSSGVLRVLTPLGPRYLNPSFTQRLYLMWVFRHFETLPVKVLSSRQSRMIEMMCANNQFVSLDLAVDYAPLLGTLEQ
Ga0066687_1029519413300005454SoilMWLEKLFSGVLRVLTPLGPRYLNPSLAQRLYLIWVFRHFETLPVKVLSSRQRRMIEFMCANNQFVSLDMGIDEAPLL
Ga0070707_10031112113300005468Corn, Switchgrass And Miscanthus RhizosphereMWLEKLSAGVLRVMTPLGPRYLKPSFGQRLYLLWVFRNFPTLPVKVLSLRQQHLLESMCAEGRFVSFGAGVDDAPLLGT
Ga0070741_1161459123300005529Surface SoilMWAEKLFAGVLRVLTPLGPRYLKPSIWQRIYLMWVFRNFQTLPFKVLNGRQQRLIESMCDENRFVAWG
Ga0070739_1015293423300005532Surface SoilMWLEKLSSGVLRILTPLGPRYLNPSFAQRLYLIWIFRHFQTLPVKVLSSRQTQMIESMCANNQFVPLSVGFYDAPVLGTLEQRPPVPEAVPLR
Ga0070730_1075519513300005537Surface SoilMWLEKLSSGVLRVLTPLGPRYLNPSLMQRLYLMWVFRHFETLPVKVLSSRQRRMIEMMCANNQFVSLDLAVD
Ga0070733_1013600013300005541Surface SoilMWLEKLSFGVLRILTPLGPRYLKPSFAQRLYLLWVFRNFQTLPVKVLSSHQQHLLESMCAENRFVSFGIGVDDAPLLG
Ga0070672_10180843823300005543Miscanthus RhizosphereMWTEKLLSGVLRVLTPLGPRYLKPSIWQRLYLLWVFRNFQTLPFKVLTARQQRLIEGMCDENRFVAWGVG
Ga0070686_10175650013300005544Switchgrass RhizosphereMWTEKLLSGVLRVLTPLGPRYLKPSIWQRLYLLWVFRNFQTLPFKVLTARQQRLIEGMCDENRFVAWGVGFDDA
Ga0066707_1035253023300005556SoilMWLEKLFSGVLRVLTPLGPRYLRPTFTQRLYLLWVFRNFPSLPVKVLTTRQRRLIESMSADDKFISFGVGIDDAPLLGTLEQRPPIPDAL
Ga0068855_10150276923300005563Corn RhizosphereMWAEKLFAGVLRVLTPLGPRYLKPSIWQRIYLMWVFRNFQTLPFKVLTGRQQRLIESMCDENRFVAWGVGFDDAPLLGTLEQRPPVHA
Ga0066708_1098430323300005576SoilMWLEKLFSGVLRVLTPLGPRYLKPTFIQRLYLLWVFRNFPSLPVKVLTTRQGRLIESMSADDKFISFGVGIDDAPLLGTLEQRPPIPDAL
Ga0068856_10249560313300005614Corn RhizosphereMWLEKLSSGVLRVLTPLGPRYLNPSFMQRLYLMWVFRHFETLPVKVLNSRQSRMIESMCANNQF
Ga0068852_10073543413300005616Corn RhizosphereMWAEKLFAGVLRVLTPLGPRYLKPSIWQRIYLMWVFRNFQTLPFKVLNRRQQRLIESMCDENRF
Ga0066651_1019674913300006031SoilMWLEKLASGVLRVLTPLGPRYLQPSFAQRLYLLWVFRNFQTLPVKVLTSRQRRLVESMWAADQFVSFGIGIDDAPLLGTLEQRPPIPESAP
Ga0066652_10209480113300006046SoilMWLEKLSSGVLRVLTPLGPRYLKPSLAQKLYLLWVFRNFQTLPLKVLNSRQQRLVESMCEQNRFV
Ga0070712_10108144013300006175Corn, Switchgrass And Miscanthus RhizosphereMLIEKLFFGVLRVMTPLGPRFLRPTFFQRLYLLWVFRNFSALPIKVLNSRQQRFVEAMWAQDRFVSFG
Ga0079222_1129703913300006755Agricultural SoilMWAEKLFAGVLRVLTPLGPRYLKPSIWQRIYLMWVFRNFQTLPFKVLNRRQQRLIESMCDENRFVAWGVGFDDAPLLGTLEQRPPEESAGHSQVAAVVV
Ga0066660_1069868213300006800SoilMWLEKLFSGVLRILTPLGPRYLQPSFVQRLHLLWIFRNFQTLPVKVLTSRQRRLVESMCAADLFVSFGAGVDDAPLLGTLEQRPPI
Ga0079220_1109003223300006806Agricultural SoilMWAEKLFAGVLRVLTPLGPRYLKPSIWQRIYLMWVFRNFQTLPFKVLNRRQQRLIESMCDENRFVAWGVGFDDAPLLGTLEQRPP
Ga0075425_10311162413300006854Populus RhizosphereMWLEKLASGVLRVLTPLGPRYLKPSFAQRLYLLWIFRNFQTLPVKVLTSRQRQLIESMCAADQFV
Ga0075434_10037566513300006871Populus RhizosphereMLIEKLFFGVLRVLTPLGPRFLKPTFFQRLYLLWVFRNFSALPIKVLNSRQQRFVEAMWAQDRFVSFGIGFDDAPLLGTLEQRPPVSESI
Ga0075426_1025089233300006903Populus RhizosphereMWAEKLFAGVLRVLTPLGPRYLKPSIWQRIYLMWVFRNFQTLPFKVLTGRQQRLIESMCDENRFVAWGVGFDDAPLLGTLEQ
Ga0075435_10014488333300007076Populus RhizosphereMLIEKLFFGVLRVLTPLGPRFLKPTFFQRLYLLWVFRNFSALPIKVLNSRQQRFVEAMWAQDRFVSFGIGFDDAPLLGTLEQRPPVSES
Ga0066710_10006716913300009012Grasslands SoilMWLEKLFSGVLRVLTPLGPRYLQPSFAQRLYLLWIFRNFQTLPVKVLTSRQRRLVESMCAADLFVSFGAGVDDAPLLGTLEQRPPI
Ga0066709_10395210813300009137Grasslands SoilMWLEKLASGVLRVLTPLGPRYLQPSFAQRLYLLWVFRNFQTLPVKVLTSRQRRLVESMWAADQFVSFGAGLDDAPLLGT
Ga0105238_1145361213300009551Corn RhizosphereMWLEKLSSGVLRVLTPLGPRYLNPSFMQRLYLMWVFRHFETLPVKVLNSRQSRMIESMCANNQFVSLDLAVDYVPL
Ga0126380_1115892413300010043Tropical Forest SoilMWLEKLSDGVLRLMTPLGPRYLRPSFRQRLYLLWVFRNFQTLPLKVLSGRQQKMIEALCEQNRFVSM
Ga0126384_1020206213300010046Tropical Forest SoilMWLEKLASGVLRILTPLGPRYLKPSFAQRIYLLWIFRNFQTLPVKVLTSRQRLLIENMCSADQFISLGVGVDDAPLLGT
Ga0126384_1244178313300010046Tropical Forest SoilMWLEKLASGVLRVLTPLGPRYLKPSFAQRLYLLWIFRNFQTLPVKVLTSRQRRLIESMCAADRFVSLGIGVDDAPL
Ga0123356_1402532513300010049Termite GutMWLEKFLSGVLRVSTPLGPRYLNPSFSQRIQLIWIFRHFETLHIKVLSSRQRHMVDSM
Ga0134070_1025307113300010301Grasslands SoilMWFEKLFSGVLRVLTPLGPRYLRPTFTQRLYLLWVFRNFPSLPVKVLTTRQRRLIESMSADDKFISFGVGVDDAPLLGTLE
Ga0134063_1031912023300010335Grasslands SoilMWLEKLSSGVLRVLTPLGPRYLKPSLAQKLYLLWLFRNFPTLPLKVLSSRQQRLVESMCEQNRFVSMGIGVDDAPLIGTLEQRPQVPSG
Ga0126370_1156246413300010358Tropical Forest SoilMWIEKLFSGVLRVWTPLGPRYLRPSFFQRLYLLWIFRNFQTLPVKVLTSRQRRFVETLWGQDRFVSFRMGIHDVPLLGTL
Ga0126370_1159923613300010358Tropical Forest SoilMWLEKLFYGVLRLMTPLGPRYLRPSFGQRLYLLWVFRNFQSLPLKVLSARQQRLIEELCEQSRFVSMGVGIDDAPLLGTLEQRPPVH
Ga0126372_1212133213300010360Tropical Forest SoilMWLEKLASGVLRVLTPLGPRYLKPSFAQRIYLLWIFRNFQTLPVKVLTSRQRQLIEDMCAADQFVSLGVGVDDAPLLGTLEQRPPIPDHAP
Ga0126377_1295555313300010362Tropical Forest SoilMWLEKLASGVLRVLTPLGPRYLKPSFAQRLYLLWIFRNFQTLPVKVLTSRQRHLIESMCDADQFVSFGVGVDDAPLLGTL
Ga0126379_1216468513300010366Tropical Forest SoilMDNGVWIEKLFFGVLRVWTPLGPRYLRPSFSQRLYLLWVFRNFQTLPVKVLTSRQRRFVETLWGQDRFVSFRMGVHDVPLLGTLEQRPP
Ga0134128_1032096433300010373Terrestrial SoilMWLEKLSSGVLRVLTPLGPRYLKPSLFQRMYLLWVFRNFQTLPFKVLSGHQQKLIEAMCDEDRFVSL
Ga0134128_1305959323300010373Terrestrial SoilMLIEKLFFGVLRVLTPLGPRFLKPTFFQRLYLLWVFRNFSALPIKVLNSRQQRFVEAMWAQDRFVSFGIGFDDAPLLGTLEQRPPVSE
Ga0126381_10426501123300010376Tropical Forest SoilMWLEKLSYGVLRLMTPLGPRYLRPSFGQRLYLLWVFRNFQSLPLKVLSARQQRLIEALCE
Ga0134126_1141049413300010396Terrestrial SoilMWLEKLFSGVLRVHTPLGPRYLQPTFAQRLYLFWIFRHFQTLPVKVLSSRQRHLIEIMCANNQFVPLSNGFDDAPVLGTLEQRPPVPVETLSR
Ga0120118_105310033300012010PermafrostMWLEKLASGVLRVLTPLGPRYLKPSLAQRLYLLWVFRNFPTLPVKVLTTRQQRLVESMCANNRFVSFGVGVDDAPRLGTLE
Ga0137389_1026993813300012096Vadose Zone SoilMWLEKLSFGVLRVLTPLGPRYLKPSFAQRLYLLWIFRNFQTLPVKVLSSHQQRLLESMCAENRFVSFGIGVDDAPLLGTLEQRPPAP
Ga0137388_1082594213300012189Vadose Zone SoilMWLEKLSFGVLRVLTPLGPRYLNPSFLQRLYLLWVFRNFQTLPVKVLSSHQQRLLESMCAEDRFVSFGVGVDDATLLGTLEQRPPV
Ga0137388_1177576913300012189Vadose Zone SoilMLEKISSGVLRVMTPVGPRYLQPTLLQRLYLLWVFRNFQTLPVKVLSSHTQRLLESMWAENRFVS
Ga0137382_1087823713300012200Vadose Zone SoilMWLEKLASGVLRVLTPLGPRYLQPSFAQRLYLLWIFRNFQTLPVKVLTSRQRRLVESMWAADQFVSFGIGIDDAPLLGTLEQR
Ga0137379_1052866123300012209Vadose Zone SoilMWLEKLFSGVLRVQTPLGPRYLRPSFAQRLYLLWIFRNFTTLPVKVLSSRQQRMMESMCSGNGFISF
Ga0137377_1139142713300012211Vadose Zone SoilMWLEKLSAGVLRVMTPLGPRYLKPSFGQRLYLLWVFRNFPTLPVKVLSLRQQHLLESMCAEGRFVSFGAGVDDAPLLGTLEQRPPVSS
Ga0137372_1113801013300012350Vadose Zone SoilMWFEKLLSGVLRVMTPLGPRYLQPTFLQRLYLMWVFRNFPALPVKVLTSRQRRLMESMCAEGNYVSSGAGVYDAPL
Ga0137366_1045959513300012354Vadose Zone SoilMWLEKLFFGVLRVQTPLGPRYLQPSFAQRLYLLWIFRNFPTLPVKVLTSRQQRMLESMCSGNGFISFGIGVEDTPLLGTLEQRPPVA
Ga0137384_1160749423300012357Vadose Zone SoilMWLEKISSGVLRVMTPVGPRYLQPSLVQRLYLLWVFRNFPTLPVKVLSSHTQRLLESMWAENRFVSFGVGTDDAPL
Ga0137385_1150827513300012359Vadose Zone SoilMWLEKLLSGVLRVLTPLGPRYLQPSFAQRLYLLWIFRNFQTLPVKVLTSRQRRLVESMCAADLFVSFGAGVDDAP
Ga0137358_1095176623300012582Vadose Zone SoilMDFEKVFSGVLRVATPLGPRYLQPSFGQRLYLLWVFRNFNTLPVKVLSSRQQRFVESMWANNRFISFGIGAHDVPLIGTLEQRPAISSD
Ga0164298_1012009633300012955SoilMWLEKLCSGVLRVLTPLGPRYLKPSLAQRIYLLWVFRNFQTLPLKVLSSRQQHLIESMCEENRFVSMGIGVDDAPLIGTLEQ
Ga0164301_1023695713300012960SoilMWIEKLLAGVLRVQTPLGPRYLKPSFAQRLYLLWVFRNFQSLPLKVLSARQQNLIEAMCDENRFVSWG
Ga0164302_1081643813300012961SoilMWIEKLLAGVLRVQTPLGPRYLKPSFAQRLYLLWVFRNFQSLPLKVLSARQQNLIEAMCDENRFVSWGIGSEDAPLLGTLEQRPPVPVHPMP
Ga0134087_1039146923300012977Grasslands SoilMWLEKLSSGVLRVLTPLGPRYLKPSLAQKLYLFWLFRNFPTLPLKVLSSRQQRLVESMCEQNRF
Ga0164304_1126476213300012986SoilMLIEKLFFGVLRVLTPLGPRFLKPTFFQRLYLLWVFRNFSALPIKVLNSRQQRFVEAMWVQDRFVSFGIGFDDAPLLGTLEQRPPV
Ga0164306_1136697813300012988SoilMWLEKLSSGVLRVLTPLGPRYLNPSFTQRLYLMWVFRHFETLPVKVLSSRQSRMIEMMCANNQ
Ga0134079_1006091413300014166Grasslands SoilMWLEKLSSGVLRVLTPLGPRYLKPSLAQKLYLLWLFRNFPTLPLKVLSSRQQRLVESMCEQNRFVSM
Ga0163163_1007799813300014325Switchgrass RhizosphereMWTEKLLSGVLRVLTPLGPRYLKPSIWQRLYLLWVFRNFQTLPFKVLTARQQRLIEGMCDENRFVAWGVGFDDAPLLGTL
Ga0157377_1034858523300014745Miscanthus RhizosphereMWTEKLLSGVLRVLTPLGPRYLKPSIWQRLYLLWVFRNFQTLPFKVLTARQQRLIEGMCDENRFVAWGVGFDDAPLLGTLEQ
Ga0132256_10202355513300015372Arabidopsis RhizosphereMWTEKLLSGVLRVLTPLGPRYLKPSIGQRLYLLWVFRNFQTLPFKVLSARQQRLIEGMCDENRFVAWGVGFDDAPLLGTL
Ga0187822_1025203113300017994Freshwater SedimentMWLEKLSSGVLRVLTPLGPRYLKPSLFQRMYLLWVFRNFQTLPFKVLSGHQQKLIEAMCDEDRFVSLGIGF
Ga0187816_1023282123300017995Freshwater SedimentMWTEKLLDGVLRVLTPLGPRYLKPSFTQRIYLLWIFRNFQTLPVKVLSRRQLKRIDAMCGQHGFISLLEPSAL
Ga0066667_1006975843300018433Grasslands SoilMWLEKLASGVLRVLTPLGPRYLQPSFAQRLYLLWVFRNFQTLPVKVLTSRQRRLVESMWAADQFVSFGAGVDDAPLLGTL
Ga0193693_104626123300019996SoilMDFEKVFFGVLRVATPLGPRYLQPSFGQRLYLLWVFRNFNTLPVKVLSSRQQRFVESMWANNR
Ga0193731_107007413300020001SoilMEFEKLFSGVLRVTTPLGPRYLQPSFGQRLYLLWVFRNFNTLPVKVLSARQQRFVESMWANNRFISFGIGAHDVPLIGTLEQR
Ga0210403_1134577523300020580SoilMWLEKLSSGVLRVLTPLGPRYLNPSVAQRLYLIWVFRHFETLPVKVLSSRQRRMIEFMC
Ga0210400_1034443933300021170SoilMLMEKLSRGVLRVLTPLGPRYLHPSFAQRLYLLWVFRNFTTLPAKVLSRRQLRLIDSMCAANRF
Ga0213876_1015970023300021384Plant RootsMFEKLFFGVLRVLTPLGPRYLRPSFFQRLRVLWLFRNFHTLPSKVLSRRQQRLIEHMCAQGRFVSFGIG
Ga0126371_1047594413300021560Tropical Forest SoilMWLEKLSLGVLRVLTPLGPRYLRPSLAQRAYLIWMFRNFQTLPVKVLSSHQQRLIEAMCNQDRFVSMDIGVDDAPLIGTLEQRPPVT
Ga0207693_1012744913300025915Corn, Switchgrass And Miscanthus RhizosphereMLIEKLFFGVLRVMTPLGPRFLRPTFFQRLYLLWVFRNFSALPIKVLNSRQQRFVEAMWAQDRFVSFGLGFDDAPLLGTLEQRPPVSESIP
Ga0207662_1100742213300025918Switchgrass RhizosphereMWTEKLLSGVLRVLTPLGPRYLKPSIWQRLYLLWVFRNFQTLPFKVLTARQQRLIEGMCDENRFVAW
Ga0207649_1097619913300025920Corn RhizosphereMWTEKLLSGVLRVLTPLGPRYLKPSIRQRLYLLWVFRNFQTLPFKVLSARQQRLIEGMCDENRFVAWGVGFDDAPLLGTLEQ
Ga0207694_1068230123300025924Corn RhizosphereMWAEKLFAGVLRVLTPLGPRYLKPSIWQRIYLMWVFRNFQTLPFKVLNRRQQRLIESMCDENRFVAWG
Ga0207694_1071323823300025924Corn RhizosphereMWTEKLLSGVLRVLTPLGPRYLKPSIGQRLYLLWVFRNFQTLPFKVLSARQQRLIEGMCDENRFVAWGVGFDDAPLVGTLE
Ga0207687_1078667023300025927Miscanthus RhizosphereMWTEKLLSGVLRVLTPLGPRYLKPSIWQRLYLLWVFRNFQTLPFKVLTARQQRLIEGMCDENRFVAWGVGFDDAPLLG
Ga0207665_1065394923300025939Corn, Switchgrass And Miscanthus RhizosphereMWLEKLSSGVLRVLTPLGPRYLNPSVAQRLYLIWVFRHFETLPVKVLSSRQRRMIEYMCANNQFVSLDMGLDETPLLGTLEQRPPVPAAV
Ga0207702_1138653713300026078Corn RhizosphereMWLEKLSSGVLRVLTPLGPRYLNPSFMQRLYLMWVFRHFETLPVKVLNSRQSRMIESMCANNQFVSLDLAVDYAP
Ga0209890_1005365613300026291SoilMWLEKISSGVLRVMTPMGPRYLQPSLLQRLYLLWVFRNFQTLPVKVLSSYQQRLLESMWAENRFVSFGVGTDDAPLLGTLEQRP
Ga0209155_100685913300026316SoilMWLEKLSSGVLRVLTPLGPRYLKPSLAQKLYLLWLFRNFPTLPLKVLSSRQQRLVESMCEQNRFVSMGIGVDDAPLIGTLEQR
Ga0209808_120827323300026523SoilMWLEKLSSGVLRVLTPLGPRYLKPSLAQKLYLLWLFRNFPTLPLKVLSSRQQRLVESMCEQNRFVSMGIGVDDA
Ga0209056_1013453713300026538SoilMWLEKLFSGVLRILTPLGPRYLQPSFVQRLHLLWIFRNFQTLPVKVLTSRQRRLVESMCAADLFVSFGAGVD
Ga0209376_140002123300026540SoilMWLEKLFSGVLRVLTPLGPRYLQPSFAQRLYLLWIFRNFQTLPVKVLTSRQRRLVESMCAADLFVSFGAGVDDAPLLGTLEQRPPIPES
Ga0209733_111406523300027591Forest SoilMSLQKLSGGVLRILTPLGPRYLRPSFAQRIYLLWIFRNFSTLPAKVLTSRQTRLIDAICAEHRFVATLGQDLL
Ga0209167_1040124433300027867Surface SoilMWLEKLSFGVLRILTPLGPRYLKPSFAQRLYLLWVFRNFQTLPVKVLSSHQQHLLESMCAENRFVSFGIGVDDAPLLGTLEQRPPVP
Ga0209488_1080774723300027903Vadose Zone SoilMWLEKLYSGVLRVLTPLGPRYLNPTFAQRLYLLWVFRNFPTLPVKVLTSRQRRLVESMCA
Ga0209526_1096132313300028047Forest SoilMWLEKVFSGVLRVLTPLGPRYLNPSVAQRLYLIWVFRHFETLPVKVLSSRQRRMIEFMCANNQFVSLDMGLDETPL
Ga0073994_1002108113300030991SoilMWLEKVFSGVLRVLTPLGPRYLNPSVAQRLYLIWVFRHFETLPVKVLSSRQRRMIEYMCANNQFVSLDIGLDETPLLGTLEQR
Ga0170822_1132491613300031122Forest SoilMWLEKISSGVLRVLTPLGPRYLKPSFPQRLYLLWVFRNFQTLPIKVLTTHQQRLLEAMCAENRFVSFGVGVDDAPLLGTLEKRPPAPSGLNKEKKKLKGFKSSTKK
Ga0170824_11660112013300031231Forest SoilMSLQKLSGGVLRIVTPLGPRYLRPSFVQRIYLLWIFRNFSTLPAKVLTTRQTRLIDAICAEHRF
Ga0307475_1032282923300031754Hardwood Forest SoilMWLEKLSSGVLRVLTPLGPRYLNPSVAQRLYLIWVFRHFETLPVKVLSSRQRRMIEYMCANNQFVCLDMGMDAAPLLGTL
Ga0307475_1075840613300031754Hardwood Forest SoilMWLEKISSGVLRVLTPLGPRYLKPSFPQRLYLLWVFRNFQTLPIKVLTMHQQRLLEAMCAENRFVSFGVGVDDAPLLGTLEQRPPAPSAGSPP
Ga0306920_10002025213300032261SoilMLEKLFFGVLRVLTPLGPRYLRPSWFERLYLLWLFRNFPTLPSKVFNPRQQRFIEAICA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.