Metagenome / Metatranscriptome Family F090687

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090687
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	132 residues
Representative Sequence	LPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Number of Associated Samples	100
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	93.52 %
% of genes from short scaffolds (< 2000 bps)	90.74 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.593 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.111 % of family members)
Environment Ontology (ENVO)	Unclassified (42.593 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.42% β-sheet: 0.00% Coil/Unstructured: 32.58%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF11304	DUF3106	70.37
PF04909	Amidohydro_2	7.41
PF02026	RyR	0.93
PF08332	CaMKII_AD	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG4875	Protein kinase association domain CaMKII_AD, NTF2-like superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.59 %
Unclassified	root	N/A	7.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.59 %
Unclassified	root	N/A	7.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.59 %
Unclassified	root	N/A	7.41 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	87.04 %
Unclassified	root	N/A	7.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	86.11 %
Unclassified	root	N/A	7.41 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	86.11 %
Unclassified	root	N/A	7.41 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	86.11 %
Unclassified	root	N/A	7.41 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	86.11 %
Unclassified	root	N/A	7.41 %
Patulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	86.11 %
Unclassified	root	N/A	7.41 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.93 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	86.11 %
Unclassified	root	N/A	7.41 %
Patulibacter minatonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter minatonensis	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886011\|MRS1b_contig_1703998	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	935	Open in IMG/M
3300000041\|ARcpr5oldR_c005994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1042	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c009975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	793	Open in IMG/M
3300000789\|JGI1027J11758_12533323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	733	Open in IMG/M
3300003324\|soilH2_10069716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter minatonensis	2763	Open in IMG/M
3300004463\|Ga0063356_104297204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300004479\|Ga0062595_101004368	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300004800\|Ga0058861_10592129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	852	Open in IMG/M
3300005277\|Ga0065716_1014225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	578	Open in IMG/M
3300005329\|Ga0070683_100895708	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	851	Open in IMG/M
3300005335\|Ga0070666_10036762	All Organisms → cellular organisms → Bacteria	3252	Open in IMG/M
3300005340\|Ga0070689_101326058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300005343\|Ga0070687_100417340	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300005354\|Ga0070675_100331830	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1345	Open in IMG/M
3300005439\|Ga0070711_100846164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300005455\|Ga0070663_101975528	Not Available	525	Open in IMG/M
3300005456\|Ga0070678_100795186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	858	Open in IMG/M
3300005457\|Ga0070662_100501481	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300005459\|Ga0068867_101839263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300005466\|Ga0070685_10719607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	729	Open in IMG/M
3300005467\|Ga0070706_100381715	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1312	Open in IMG/M
3300005518\|Ga0070699_101635237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	590	Open in IMG/M
3300005535\|Ga0070684_101269263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	693	Open in IMG/M
3300005544\|Ga0070686_100763299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	776	Open in IMG/M
3300005546\|Ga0070696_100081072	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2299	Open in IMG/M
3300005547\|Ga0070693_101377014	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300005563\|Ga0068855_100326528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1695	Open in IMG/M
3300005577\|Ga0068857_101585732	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300005598\|Ga0066706_10498094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	970	Open in IMG/M
3300005719\|Ga0068861_102120294	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300005841\|Ga0068863_100937432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	867	Open in IMG/M
3300006175\|Ga0070712_101670261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300006358\|Ga0068871_100461763	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1140	Open in IMG/M
3300006755\|Ga0079222_10716037	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	796	Open in IMG/M
3300006852\|Ga0075433_10832708	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	806	Open in IMG/M
3300006854\|Ga0075425_100759724	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1112	Open in IMG/M
3300006854\|Ga0075425_101734499	Not Available	702	Open in IMG/M
3300006881\|Ga0068865_101413126	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	621	Open in IMG/M
3300006904\|Ga0075424_101519916	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	710	Open in IMG/M
3300009094\|Ga0111539_11216108	Not Available	875	Open in IMG/M
3300009094\|Ga0111539_11304220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	843	Open in IMG/M
3300009137\|Ga0066709_102491083	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	698	Open in IMG/M
3300009148\|Ga0105243_12343369	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	572	Open in IMG/M
3300009177\|Ga0105248_10190347	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2312	Open in IMG/M
3300009551\|Ga0105238_11603605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	681	Open in IMG/M
3300009553\|Ga0105249_11775939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	689	Open in IMG/M
3300009553\|Ga0105249_11816497	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	682	Open in IMG/M
3300010358\|Ga0126370_11145643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720	Open in IMG/M
3300010362\|Ga0126377_12948590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300010396\|Ga0134126_11885832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	654	Open in IMG/M
3300010397\|Ga0134124_10301006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1495	Open in IMG/M
3300010401\|Ga0134121_11285570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	736	Open in IMG/M
3300012349\|Ga0137387_10399989	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	996	Open in IMG/M
3300012489\|Ga0157349_1013541	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	692	Open in IMG/M
3300012519\|Ga0157352_1060242	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300012685\|Ga0137397_11068310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	590	Open in IMG/M
3300012891\|Ga0157305_10178121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300012914\|Ga0157297_10163383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	738	Open in IMG/M
3300012915\|Ga0157302_10384209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300012924\|Ga0137413_10152639	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1510	Open in IMG/M
3300012944\|Ga0137410_10407046	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1097	Open in IMG/M
3300012955\|Ga0164298_10598652	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756	Open in IMG/M
3300013100\|Ga0157373_10750486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300013306\|Ga0163162_10472944	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1385	Open in IMG/M
3300013308\|Ga0157375_12120861	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300014969\|Ga0157376_10824045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	942	Open in IMG/M
3300015201\|Ga0173478_10485635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300015241\|Ga0137418_10281273	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300015372\|Ga0132256_102907112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300015373\|Ga0132257_100399628	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300017966\|Ga0187776_11530378	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300018469\|Ga0190270_12769121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300018482\|Ga0066669_12009218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300019356\|Ga0173481_10086536	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1172	Open in IMG/M
3300019361\|Ga0173482_10735600	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300019362\|Ga0173479_10289569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300019878\|Ga0193715_1015930	All Organisms → cellular organisms → Bacteria → Proteobacteria	1626	Open in IMG/M
3300025271\|Ga0207666_1063371	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	593	Open in IMG/M
3300025914\|Ga0207671_11065229	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300025916\|Ga0207663_10979537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300025920\|Ga0207649_10471577	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	951	Open in IMG/M
3300025920\|Ga0207649_10697475	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	787	Open in IMG/M
3300025925\|Ga0207650_10532401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	984	Open in IMG/M
3300025932\|Ga0207690_10752895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300025944\|Ga0207661_10514828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1094	Open in IMG/M
3300025960\|Ga0207651_10630730	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300025961\|Ga0207712_11104348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	706	Open in IMG/M
3300026023\|Ga0207677_11004769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756	Open in IMG/M
3300026078\|Ga0207702_10887116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	883	Open in IMG/M
3300026118\|Ga0207675_100953776	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	875	Open in IMG/M
3300026529\|Ga0209806_1295993	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300027787\|Ga0209074_10553698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300027907\|Ga0207428_10050116	All Organisms → cellular organisms → Bacteria	3342	Open in IMG/M
3300027907\|Ga0207428_10418414	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	980	Open in IMG/M
3300027907\|Ga0207428_10967784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	599	Open in IMG/M
3300031226\|Ga0307497_10252357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	789	Open in IMG/M
3300031469\|Ga0170819_14194405	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	719	Open in IMG/M
3300031474\|Ga0170818_108090113	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	812	Open in IMG/M
3300031854\|Ga0310904_10506033	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	811	Open in IMG/M
3300031942\|Ga0310916_11038584	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	683	Open in IMG/M
3300031954\|Ga0306926_12398926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300033290\|Ga0318519_10677181	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300033475\|Ga0310811_11422541	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.85%
Host-Associated	Host-Associated	48.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.85%
Plants	Host-Associated → Plants	46.30%
Human	Host-Associated → Human	1.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.74%
Digestive System	Host-Associated → Human → Digestive System	1.85%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.59%
Loam	Environmental → Terrestrial → Soil → Loam	12.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.70%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.70%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.85%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.85%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012489	Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MRS1b_0946.00003250	2162886011	Miscanthus Rhizosphere	QQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA
ARcpr5oldR_0059941	3300000041	Arabidopsis Rhizosphere	LLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
ARSoilOldRDRAFT_0099751	3300000044	Arabidopsis Rhizosphere	RRRVGQHLSGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
JGI1027J11758_125333231	3300000789	Soil	EQRRVQQHLSQCVSCQGFLDDLRRWLPQIAKSEPMAPAFWDDYYRETVTKLARQEERKHWWRAXLAPRPMWMVPAFGTVGVAILVVGLLFGKGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPNTDSTSRQSIRVRLQQDIV*
soilH2_100697161	3300003324	Sugarcane Root And Bulk Soil	RWLPQIAQSEPMTTAFWDNYYRETVAKLERRGAKDPWWRSWLAPRPMWMVPAFGTVGVMLLAVGLLFGKGNLTFFMQRPAANIPQEVLADQDQLQFFESMDLLESLSRLEKQDDSNSEKSSPRSSRAPGQQETV*
Ga0063356_1042972042	3300004463	Arabidopsis Thaliana Rhizosphere	AKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0062595_1010043681	3300004479	Soil	RRVGQHLSGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0058861_105921292	3300004800	Host-Associated	DATEQRRVSEHLTQCGSCRGFLDDLRRWLPQIAQAEPMTPAFWDNYYRETVSKIERREEREPWWRSWFAPRPMWMVPAFGTVGVMLLVVGLLFGKGNLTYFMQRPAANIPQEVLADEDQLQFFESMDLLESLNRLEKQDDSNGEKTNPQSSRALGRQETV*
Ga0058862_119909841	3300004803	Host-Associated	REPWWRSWFAPRPMWMVPAFGTVGVMLLVVGLLFGKGNLTYFMQRPAANIPQEVLADEDQLQFFESMDLLESLNRLEKQDDSNGEKTNPQSSRALGRQETV*
Ga0065716_10142251	3300005277	Arabidopsis Rhizosphere	RRWLPQIAKSEPMAPAFWDDYYRETVTKLARQEERKHWWRALLAPRPMWMVPAFGTVGVAILVVGLLFGKGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPNTDSTSRQSNRVRLQQDIV*
Ga0070683_1008957083	3300005329	Corn Rhizosphere	LSGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0070666_100367621	3300005335	Switchgrass Rhizosphere	LFGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0070689_1013260582	3300005340	Switchgrass Rhizosphere	YRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0070687_1004173401	3300005343	Switchgrass Rhizosphere	TEELPQSFWDNYYRETVAKLAQQDKRKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSLDEQKPEAVNTQSSRMRFQSGTV*
Ga0070675_1003318301	3300005354	Miscanthus Rhizosphere	FGCLRCQGFLGDLQRLLPQMARTEELPQSFWDDYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0070711_1008461641	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0070663_1019755282	3300005455	Corn Rhizosphere	YRETVAKLAQQDERKHWWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0070678_1007951861	3300005456	Miscanthus Rhizosphere	FWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSLDEQKPEAVNTQSSRMRFQSGTV*
Ga0070662_1005014813	3300005457	Corn Rhizosphere	FGCLRCQGFLGDLQRLLPQMARTEELPQSFWDDYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPETVNTQSSRMRFQSGTV*
Ga0068867_1007697821	3300005459	Miscanthus Rhizosphere	WWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0068867_1018392632	3300005459	Miscanthus Rhizosphere	TVTKLARQEERKHWWRALLAPRPMWMVPAFGTVGVAILVVGLLFGKGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPNTDSTNSQSIRGRLQQDIV*
Ga0070685_107196072	3300005466	Switchgrass Rhizosphere	YYYGETSEDERRRIGQHLFGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0070706_1003817151	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RLLPQIAKSAQMPPSFWDEYYRETVAKLAQQEARKHWWRALFAPRQIWMVPAFGTVAVAILVVGLLFGKGNLNSFMHRTSERIPQEILADENQLQFFESMDLLESLGTLEKQDDQNAESTNTQSSRVRQQHAVA*
Ga0070699_1016352371	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EPMTPAFWDNYYRETVSKLERREEREPWWRSWFAPRPMWMVPAFGTVGVMLLVVGLLFGKGNLTYFMQRPAANIPQEVLADEDQLQFFESMDLLESLNRLEKQDGSNGEKTNPQSSRALGRQETV*
Ga0070684_1012692631	3300005535	Corn Rhizosphere	GCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0070686_1007632991	3300005544	Switchgrass Rhizosphere	GQHLFGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0070696_1000810724	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LFGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKLEAVNTQSSRMRFQSGTV*
Ga0070693_1013770142	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	YRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0068855_1003265281	3300005563	Corn Rhizosphere	PQMARTEELPQSFWDDYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPETVNTQSSRMRFQSGTV*
Ga0068857_1015857321	3300005577	Corn Rhizosphere	TSEEERRRVGQHLSGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0066706_104980941	3300005598	Soil	KLAQQEERKYWWRGLFTPMRIWLVPAFGTVTVAVLVIGLLFGKGNLSSFLHRPSEKIPQEVLADENQLQFFESMDLLESLGNLENQDDQKSDSTNSQSSRVRLQSGVA*
Ga0068861_1021202941	3300005719	Switchgrass Rhizosphere	PQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0068863_1009374322	3300005841	Switchgrass Rhizosphere	AKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLISFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0070712_1016702612	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0068871_1004617633	3300006358	Miscanthus Rhizosphere	GFLGDLQRLLPQMARTEELPQSFWDDYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0079222_107160372	3300006755	Agricultural Soil	LLPQMARTEELPQSFWDNYYRETVAKLAQQDELKHWWRSLIPQMKIWMVPAFGTVAMMVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0075433_108327082	3300006852	Populus Rhizosphere	GCLRCQSFFDDLQRLLPQMARSEELPQSFWNDYYRETVAKLAQQDERQHWWRSLIPQMKIWMVPAFGTVAMAALAIGLLFGKGNLSSFGLRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEALSPQSTRVRWQTGTA*
Ga0075425_1007597241	3300006854	Populus Rhizosphere	LPQSFWNDYYRETVAKLAQQDERQHWWRSLIPQMKIWMVPAFGTVAMAALAIGLLFGKGNLSSFGLRPTEKIPHEILADENQLQFFESMDLLESLNKLEAQDEQKPEALSPQSSRVRLQTGTA*
Ga0075425_1017344991	3300006854	Populus Rhizosphere	KLEPRKEREPWWHSWFAPKPMWMVPAFGTVGVMLLVVGMLFGKGNLTSFMQRPTANIPQEVLADEDQLQFFESMDLLESLSRLEKQDDSNHEKTNPQSSRALGRQETV*
Ga0068865_1014131261	3300006881	Miscanthus Rhizosphere	RLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0075424_1015199162	3300006904	Populus Rhizosphere	GFVDDLRHWLPQIAQAEPMTPAFWDDYYRETVSKLEPRKEREPWWHSWFAPKPMWMVPAFGTVGVMLLVVGMLFGKGNLTSFMQRPTANIPQEVLADEDQLQFFESMDLLESLSRLEKQDDSNHEKTNPQSSRALGRQETV*
Ga0111539_112161081	3300009094	Populus Rhizosphere	LAQQDERKHWWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0111539_113042202	3300009094	Populus Rhizosphere	AKSEPMAPAFWEDYYRETVAKLTRQEEHKHWWRALFAPRPMWMVPAFGTVGVAVLVVGLLFGRGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPSTDSTSSQSIRVRMQQDIV*
Ga0066709_1024910831	3300009137	Grasslands Soil	PQMARSEQLPQSFWDNYYRETLAKLAQQEERKYWWHRLFTPMRIWLVPAFGTVTVAVLVIGLLFGKGNLSSFLHRPSEKIPQEVLADENQLQFFESMDLLESLGNLENQDDQKSDSTNSQSSRVRLQSGVA*
Ga0105243_123433691	3300009148	Miscanthus Rhizosphere	YYGETSEDERRRIGRHLFGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0105248_101903471	3300009177	Switchgrass Rhizosphere	LQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPALGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPETVNTQSSRMRFQSGTV*
Ga0105238_116036052	3300009551	Corn Rhizosphere	FGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSCRMRFQSGTV*
Ga0105249_117759392	3300009553	Switchgrass Rhizosphere	FWDNYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0105249_118164972	3300009553	Switchgrass Rhizosphere	YYRETVTKLARQEERKHWWRALLAPRPMWMVPAFGTVGVAILVVGLLFGKGNLSSFIHRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPNTDSTNRQSNRVRLQQDIV*
Ga0126370_111456432	3300010358	Tropical Forest Soil	YYRETVAKLAQQDERKHWWRTLIPPMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFMLRPAEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQPKPEAVNTQSNRQRLQSGIA*
Ga0126377_129485901	3300010362	Tropical Forest Soil	RRWLPQIAKSEPMAPAFWEDYYRETVAKLTRQEEHKHWWRALFAPRPMWMVPAFGTVGVAVLVVGLLFGRGNLSSFMQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPSTDSTSSQSIRVRMQQDIV*
Ga0134126_118858322	3300010396	Terrestrial Soil	YYRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0134124_103010061	3300010397	Terrestrial Soil	FGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSLDEQKPEAVNTQSSRMRFQSGTV*
Ga0134121_112855701	3300010401	Terrestrial Soil	LPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0137387_103999891	3300012349	Vadose Zone Soil	LAQQEARKHWWRALFAPRQIWLVPAFGTVAVAILVVGLLFGKGNLNSFMHRTSERIPQEILADESQLQFFESMDLLESLGTLEKQDDQNTDSTNTQSSRVRLQHAVA*
Ga0157349_10135412	3300012489	Unplanted Soil	GFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEALSPQSGRVRLQTGTA*
Ga0157352_10602422	3300012519	Unplanted Soil	GCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFMVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEALSPQSGRVRLQTGTA*
Ga0137397_110683101	3300012685	Vadose Zone Soil	DLRRWLPQIAKSEPMAPAFWDDYYRETVSKLARQEERKHWWRALFAPRPIWMVPAFGTVGVAVLVVGVLFGRGNLSSFIQRPAERIPQEILADENQLQFFESMDMLESLGKLEKQDEPSTDSTSSQSIQVRMQQDIV*
Ga0157305_101781211	3300012891	Soil	SFWDDYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPETVNTQSSRMRFQSGTV
Ga0157297_101633832	3300012914	Soil	FWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPALGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSLDEQKPEAVNTQSSRMRFQSGTV*
Ga0157302_103842092	3300012915	Soil	WDNYYRETVAKLAQQDERKHWWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPETVNTQSSRMRFQSSTV*
Ga0137396_108086491	3300012918	Vadose Zone Soil	EARKHWWRALFAPRQIWLVPAFGTVAVAILVVGLLFGKGNLNSFMHRTSERIPQEILADENQLQFFESMDLLESLGTLEKQDDQNTDSTNTQSSRVRLQHAVA*
Ga0137413_101526391	3300012924	Vadose Zone Soil	QGFLDDLRRWLPQIAKSEPMAPAFWEDYYRETVAKLTRQEERKHWWRALFAPRPMWMVPAFGTVGVAVLVVGLLFGKGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPSDSTSSQSIQVRMQQDIV*
Ga0137410_104070462	3300012944	Vadose Zone Soil	VEQRRVQQHLAQCVSCQGFLDDLRRWLPQIAKSEPMAPAFWDDYYRETVTKLARQEERKHWWRALLAPRPMWMVPAFGTVGVAVLVVGLLFGKGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPTTDSTSSQSIRGRLQQDIV*
Ga0164298_105986522	3300012955	Soil	GCLRCQGFLGDLQRLLPQMARTEELPQSFWDNHYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0157373_107504861	3300013100	Corn Rhizosphere	GETSEDERRRVGQHLFGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPALGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0163162_104729443	3300013306	Switchgrass Rhizosphere	YRETVTKLARQEERKHWWRALLAPRPMWMVPAFGTVGVAILVVGLLFGKGNLSSFIQRPAERIPQEILADENQLQFFESMHLLESLGKLEKQDDPNTDSTNSQSIRGRLQQDIV*
Ga0157375_121208612	3300013308	Miscanthus Rhizosphere	ETSEEERRRVGQHLSGCLRCQGFLGVLQRLLPQMSRTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0157376_108240452	3300014969	Miscanthus Rhizosphere	CQGFLGDLQRLLPQMARTEELPQSFWDDYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFRKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV*
Ga0173478_104856351	3300015201	Soil	LYDFRSEDERRRVGQHLFGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPALGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPETVNTQSSRMRFQSGTV*
Ga0137418_102812732	3300015241	Vadose Zone Soil	MASKSAKGFALVDLPKRNRTLVGEVQASARDHRVDEVEQRRVQQHLAQCVSCQGFLDDLRRWLPQIAKSEPMAPAFWDDYYRETVTKLARQEEHKHWWRALFAPRPIWMVPAFGTVGVAVLVVGLLFGKGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPTTDSTSSQSIQVRMQQDIV*
Ga0132256_1029071122	3300015372	Arabidopsis Rhizosphere	DYYRETVTKLARQEERKHWWRALLAPRPMWMVPAFGTVGVALLVVGLLFGKGNLSSFIQRPAERIPQAILADENQLQFFESMDLLESLGTLEKQDDQNADSTNTQSSRVRQQHAVA*
Ga0132257_1003996281	3300015373	Arabidopsis Rhizosphere	LPQSFWDNYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA*
Ga0187776_115303782	3300017966	Tropical Peatland	TMAKLAQQEQRKRWWQGLIPQMRVWMVPAFGTVVMVVLVVGLLFGKNNLSLFSPRPSESIPHEILADDNQLKFFESMDLLESLSKLEAQDEQKPKAMDPQSSRARLARGIA
Ga0190270_127691211	3300018469	Soil	AKSEPMAPAFWDNYYRETVSKLAREDERKHWWRALFAPRPMWMVPAFGTVGVAVLVVGLLFGKGNISSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPNTDSTSSQSIRGRLQQDIV
Ga0066669_120092182	3300018482	Grasslands Soil	PPSFWDEYYRETVAKLAQQEARKHWWRALFAPRQIWLVPAFGTVAVAILVVGLLFGKGNLNSFMHRTSERIPQEILADESQLQFFESMDLLESLGTLEKQDDQNTDSTNTQSSRVRLQHAVA
Ga0173481_100865364	3300019356	Soil	QQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Ga0173482_107356001	3300019361	Soil	QMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA
Ga0173479_102895691	3300019362	Soil	SFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFSESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Ga0193715_10159301	3300019878	Soil	FVEDLQRLLPQIAKSAQMPPSFWDEYYRETVAKLAQQEARKHWWRALFAPRQIWMVPAFGTVAVAILVVGLLFGKGNLNSFMHRTSERIPQEILADESQLQFFESMDLLESLGTLEKQDDQNTDSTNTQSSRVRLQHAVA
Ga0207666_10633711	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	NYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA
Ga0207671_110652292	3300025914	Corn Rhizosphere	LPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAGKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Ga0207663_109795371	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	WDNYYRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA
Ga0207649_104715772	3300025920	Corn Rhizosphere	FLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA
Ga0207649_106974751	3300025920	Corn Rhizosphere	ETSEDERRRIGRHLFGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Ga0207650_105324013	3300025925	Switchgrass Rhizosphere	ELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA
Ga0207690_107528951	3300025932	Corn Rhizosphere	GCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPALGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Ga0207661_105148283	3300025944	Corn Rhizosphere	QMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPALGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSLDEQKPEAVNTQSSRMRFQSGTV
Ga0207651_106307302	3300025960	Switchgrass Rhizosphere	LPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPALGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSLDEQKPEAVNTQSSRMRFQSGTV
Ga0207651_115473892	3300025960	Switchgrass Rhizosphere	DERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTFRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA
Ga0207712_111043481	3300025961	Switchgrass Rhizosphere	FLDDLRRWLPQIAKSEPMAPAFWDDYYRETVTKLARQEERKHWWRALLAPRPMWMVPAFGTVGVAILVVGLLFGKGNLSSFIHRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPNTDSTNRQSNRVRLQQDIV
Ga0207668_104793591	3300025972	Switchgrass Rhizosphere	WWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPETVNTQSSRMRFQSGTV
Ga0207677_110047692	3300026023	Miscanthus Rhizosphere	LPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Ga0207702_108871161	3300026078	Corn Rhizosphere	RRVGQHLFGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Ga0207675_1009537762	3300026118	Switchgrass Rhizosphere	RLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWMVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Ga0209806_12959932	3300026529	Soil	PQSFWDNYYRETLAKLAQQEERKYWWRGLFTPMRIWLVPAFGTVTVAVLVIGLLFGKGNLSSFLHRPSEKIPQEVLADENQLQFFESMDLLESLGNLENQDDQ
Ga0209074_105536981	3300027787	Agricultural Soil	EDERRRIGQHLFGCLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDELKHWWRSLIPQMKIWMVPAFGTVAMMVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Ga0207428_100501161	3300027907	Populus Rhizosphere	AKSEPMAPAFWDDYYRETVTKLARQEERKHWWRALLAPRPMWMVPAFGTVGVAILVVGLLFGKGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPSTDSTSSQSIRVRMQQDIV
Ga0207428_104184141	3300027907	Populus Rhizosphere	CQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSIKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA
Ga0207428_109677842	3300027907	Populus Rhizosphere	GDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRSLIPQMKIWIVPAFGTVAMTVLVIGLLFGKGNLSSFTLRPAEKIPHEILADENQLQFFESMDLLESLSKLQSQDEQKPEAVNTQSSRMRFQSGTV
Ga0307497_102523572	3300031226	Soil	EVEQRRVQQHLSQCVSCQGFLDDLRRWLPQIAKSEPMTPAFWDDYYRETVSKLARQDERKHWWRALFAPRPMWMVPAFGTVGIAILVVGLLFGKGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPNTDSTNSQSIRGRLQQDIV
Ga0170819_141944051	3300031469	Forest Soil	PQIAKSEPMAPAFWEDYYRETVSKLARQDERKHWWRALFAPRPMWMVPAFGTVGVAVLVVGLLFGRGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPNTDSTSSRSIRVRMQQDIV
Ga0170818_1080901131	3300031474	Forest Soil	SEPMAPAFWDDYYRETVTKLARQEERKHWWRALLAPRPMWMVPAFGTVGVAILVVGLLFGKGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPNTDSTSSRSIRVRMQQDIV
Ga0310904_105060331	3300031854	Soil	ETVAKLARQEERKHWWHALFAPRPIWMVPAFGTVGVAVLVVGLLFGRGNLSSFIQRPAERIPQEILADENQLQFFESMDLLESLGKLEKQDDPSTDSTSSQSIRLRMQQDIV
Ga0310916_110385842	3300031942	Soil	ERSRIGEHVAGCVRCRGFLDDLHRFLPQMARSEQLSQSFWDNYYRETVAKLAQQDERKHWWRTLIPPMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFMLRPAEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQPNPKAVNTQSSRQRLQSGIA
Ga0306926_123989261	3300031954	Soil	EELPQSFWDNYYRETVAKLAQQDERKHWWRTLIPPMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFMLRPAEKIPHEILADENQLQFFESMDLLESLTKLEAQDEQPKPEAVNTQSSRQRLQSGIA
Ga0318519_106771812	3300033290	Soil	QDERKHWWRTLIPPMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFMLRPAEKIPHEILADENQLQFFESMDLLESLTKLEAQDEQPKPEAVNTQSSRQRLQSGIA
Ga0310811_114225411	3300033475	Soil	CLRCQGFLGDLQRLLPQMARTEELPQSFWDNYYRETVAKLAQQDERKHWWRALIPSMKIWMVPAFGTVAMAVLVIGLLFGKGNLSSFTVRPTEKIPHEILADENQLQFFESMDLLESLGKLEAQDEQKPEAVNTQSSRVKLQSGIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090687

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences