Metagenome Family F090685

Basic Information
Family ID	F090685
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	41 residues
Representative Sequence	ADKFEELVLEAFQKKVTTEVPVPPGADSIPDYPERGADAR
Number of Associated Samples	97
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.85 %
% of genes near scaffold ends (potentially truncated)	98.15 %
% of genes from short scaffolds (< 2000 bps)	94.44 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (54.630 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.593 % of family members)
Environment Ontology (ENVO)	Unclassified (16.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.148 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.41% β-sheet: 0.00% Coil/Unstructured: 70.59%
Feature Viewer

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Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF08044	DUF1707	7.41
PF03992	ABM	5.56
PF10604	Polyketide_cyc2	4.63
PF13483	Lactamase_B_3	2.78
PF07690	MFS_1	1.85
PF07045	DUF1330	1.85
PF13669	Glyoxalase_4	1.85
PF11716	MDMPI_N	1.85
PF13602	ADH_zinc_N_2	0.93
PF00005	ABC_tran	0.93
PF04191	PEMT	0.93
PF12680	SnoaL_2	0.93
PF01208	URO-D	0.93
PF13649	Methyltransf_25	0.93
PF01872	RibD_C	0.93
PF00069	Pkinase	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.70
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.85
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.93
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	0.93
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
All Organisms	root	All Organisms	45.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
cellular organisms	root	All Organisms → cellular organisms	45.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.00 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6.48 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.70 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2.78 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.93 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.93 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.63 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.70 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	1.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.93 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.93 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.63 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.70 %
Spongiactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Spongiactinospora	0.93 %
Aquihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans	0.93 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.93 %
Iamia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia	0.93 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.63 %
Spongiactinospora gelatinilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Spongiactinospora → Spongiactinospora gelatinilytica	0.93 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.93 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.93 %
unclassified Iamia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia	0.93 %
unclassified Aquihabitans	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans	0.93 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.63 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.63 %
Aquihabitans sp. Kera 3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3	0.93 %
Iamia sp. SCSIO 61187	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia → Iamia sp. SCSIO 61187	0.93 %
Streptomyces sp. MMG1121	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MMG1121	0.93 %
Spongiactinospora gelatinilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Spongiactinospora → Spongiactinospora gelatinilytica	0.93 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.93 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.93 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS401BKQIL	Not Available	527	Open in IMG/M
3300005435\|Ga0070714_100639420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1023	Open in IMG/M
3300005537\|Ga0070730_10743834	Not Available	620	Open in IMG/M
3300005537\|Ga0070730_10948595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	538	Open in IMG/M
3300005541\|Ga0070733_10284686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1091	Open in IMG/M
3300005576\|Ga0066708_10490136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	791	Open in IMG/M
3300005591\|Ga0070761_10822516	Not Available	585	Open in IMG/M
3300005719\|Ga0068861_102417833	Not Available	528	Open in IMG/M
3300005764\|Ga0066903_101185049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1417	Open in IMG/M
3300005921\|Ga0070766_10269864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1085	Open in IMG/M
3300006175\|Ga0070712_101692718	Not Available	554	Open in IMG/M
3300006755\|Ga0079222_11535882	Not Available	627	Open in IMG/M
3300006852\|Ga0075433_10806908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	820	Open in IMG/M
3300009011\|Ga0105251_10461795	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300009088\|Ga0099830_10574245	Not Available	924	Open in IMG/M
3300009089\|Ga0099828_11927424	Not Available	518	Open in IMG/M
3300009098\|Ga0105245_11512799	Not Available	722	Open in IMG/M
3300009098\|Ga0105245_12807475	Not Available	540	Open in IMG/M
3300009524\|Ga0116225_1287061	Not Available	735	Open in IMG/M
3300009839\|Ga0116223_10164286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1373	Open in IMG/M
3300010046\|Ga0126384_12495989	Not Available	502	Open in IMG/M
3300010339\|Ga0074046_10477827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300010339\|Ga0074046_10922803	Not Available	506	Open in IMG/M
3300010366\|Ga0126379_11188618	Not Available	869	Open in IMG/M
3300010373\|Ga0134128_11491753	Not Available	744	Open in IMG/M
3300010379\|Ga0136449_100197620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3833	Open in IMG/M
3300010379\|Ga0136449_103483536	Not Available	600	Open in IMG/M
3300010398\|Ga0126383_13256073	Not Available	530	Open in IMG/M
3300011120\|Ga0150983_13574735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1270	Open in IMG/M
3300011269\|Ga0137392_11234826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300012209\|Ga0137379_10339924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Aquihabitans → unclassified Aquihabitans → Aquihabitans sp. Kera 3	1411	Open in IMG/M
3300012211\|Ga0137377_11349906	Not Available	642	Open in IMG/M
3300012957\|Ga0164303_10023994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2402	Open in IMG/M
3300012985\|Ga0164308_10843430	Not Available	802	Open in IMG/M
3300014968\|Ga0157379_12043314	Not Available	567	Open in IMG/M
3300015373\|Ga0132257_102682398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	649	Open in IMG/M
3300016357\|Ga0182032_11721166	Not Available	547	Open in IMG/M
3300016371\|Ga0182034_11271272	Not Available	641	Open in IMG/M
3300017926\|Ga0187807_1121117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. MMG1121	829	Open in IMG/M
3300017928\|Ga0187806_1042294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1372	Open in IMG/M
3300017959\|Ga0187779_10337158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	972	Open in IMG/M
3300017972\|Ga0187781_11085672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	587	Open in IMG/M
3300017974\|Ga0187777_10295238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1107	Open in IMG/M
3300017974\|Ga0187777_11225577	Not Available	549	Open in IMG/M
3300018001\|Ga0187815_10453965	Not Available	547	Open in IMG/M
3300018025\|Ga0187885_10537748	Not Available	520	Open in IMG/M
3300018042\|Ga0187871_10356428	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300018046\|Ga0187851_10814113	Not Available	525	Open in IMG/M
3300020582\|Ga0210395_10485553	Not Available	929	Open in IMG/M
3300020583\|Ga0210401_10987258	Not Available	701	Open in IMG/M
3300021362\|Ga0213882_10516559	Not Available	512	Open in IMG/M
3300021407\|Ga0210383_10139710	Not Available	2055	Open in IMG/M
3300021407\|Ga0210383_11369474	Not Available	589	Open in IMG/M
3300021559\|Ga0210409_10385909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1255	Open in IMG/M
3300021560\|Ga0126371_13352050	Not Available	541	Open in IMG/M
3300024290\|Ga0247667_1102200	Not Available	528	Open in IMG/M
3300025634\|Ga0208589_1085945	Not Available	752	Open in IMG/M
3300025939\|Ga0207665_10955838	Not Available	681	Open in IMG/M
3300026078\|Ga0207702_11131256	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300026551\|Ga0209648_10706852	Not Available	550	Open in IMG/M
3300027867\|Ga0209167_10286298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300027879\|Ga0209169_10307009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300027882\|Ga0209590_10405110	All Organisms → cellular organisms → Bacteria → Terrabacteria group	881	Open in IMG/M
3300027905\|Ga0209415_10046898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5667	Open in IMG/M
3300028747\|Ga0302219_10388609	Not Available	546	Open in IMG/M
3300028808\|Ga0302228_10272823	Not Available	760	Open in IMG/M
3300028877\|Ga0302235_10161659	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300028879\|Ga0302229_10206816	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300029999\|Ga0311339_11286989	Not Available	664	Open in IMG/M
3300030013\|Ga0302178_10229531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	880	Open in IMG/M
3300030013\|Ga0302178_10461853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia → Iamia sp. SCSIO 61187	558	Open in IMG/M
3300030057\|Ga0302176_10339303	Not Available	605	Open in IMG/M
3300030490\|Ga0302184_10127426	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300030490\|Ga0302184_10238446	Not Available	748	Open in IMG/M
3300030503\|Ga0311370_10664294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300030580\|Ga0311355_10044335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5285	Open in IMG/M
3300030706\|Ga0310039_10268895	Not Available	653	Open in IMG/M
3300030906\|Ga0302314_10745294	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300031027\|Ga0302308_10003973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11703	Open in IMG/M
3300031028\|Ga0302180_10614055	Not Available	522	Open in IMG/M
3300031234\|Ga0302325_13104494	Not Available	533	Open in IMG/M
3300031525\|Ga0302326_10835922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1320	Open in IMG/M
3300031525\|Ga0302326_13535341	Not Available	518	Open in IMG/M
3300031543\|Ga0318516_10140576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1384	Open in IMG/M
3300031679\|Ga0318561_10671976	Not Available	570	Open in IMG/M
3300031680\|Ga0318574_10738998	Not Available	577	Open in IMG/M
3300031708\|Ga0310686_102436342	Not Available	512	Open in IMG/M
3300031708\|Ga0310686_106229375	Not Available	702	Open in IMG/M
3300031736\|Ga0318501_10281609	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300031747\|Ga0318502_10626640	Not Available	648	Open in IMG/M
3300031751\|Ga0318494_10794819	Not Available	554	Open in IMG/M
3300031805\|Ga0318497_10178731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1169	Open in IMG/M
3300031805\|Ga0318497_10459958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Spongiactinospora → Spongiactinospora gelatinilytica	713	Open in IMG/M
3300031833\|Ga0310917_10736798	Not Available	667	Open in IMG/M
3300031846\|Ga0318512_10470753	Not Available	635	Open in IMG/M
3300031879\|Ga0306919_10281721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1257	Open in IMG/M
3300031894\|Ga0318522_10351739	Not Available	558	Open in IMG/M
3300032001\|Ga0306922_12278919	Not Available	520	Open in IMG/M
3300032008\|Ga0318562_10467332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300032067\|Ga0318524_10520428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300032076\|Ga0306924_11902561	Not Available	617	Open in IMG/M
3300032160\|Ga0311301_11824016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300032770\|Ga0335085_12293552	Not Available	540	Open in IMG/M
3300032782\|Ga0335082_11390508	Not Available	572	Open in IMG/M
3300032828\|Ga0335080_11631767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300032892\|Ga0335081_11595116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	717	Open in IMG/M
3300033134\|Ga0335073_11239806	Not Available	744	Open in IMG/M
3300033158\|Ga0335077_10401958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1471	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.59%
Host-Associated	Host-Associated	7.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.04%
Plants	Host-Associated → Plants	7.41%
Aquatic	Environmental → Aquatic	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.44%
Peat	Environmental → Terrestrial → Peat	16.67%
Freshwater	Environmental → Aquatic → Freshwater	5.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.78%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Loam	Environmental → Terrestrial → Soil → Loam	7.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.63%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.59%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	16.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090685

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_01601470	2189573004	Grass Soil	QVDEFEKMILKGFPAKGIRRRSNPLGAADISAYPERGSDGR
Ga0070714_1006394201	3300005435	Agricultural Soil	QVDEFEKMILKAFQKKVSADVPIPPGATDFPDYPERGSDGR*
Ga0070730_107438341	3300005537	Surface Soil	LRTQRADEFEKMVLKAFQRKVSAEVPIPPGAADIPDYSERDAR*
Ga0070730_109485951	3300005537	Surface Soil	EEMVLEAFQKKVTAEVPVPPGSVGIPDYPERGTDAR*
Ga0070733_102846861	3300005541	Surface Soil	LRTLQADALEELLLEAFQKKITAEVPVPPGAADIPHNPKRGTDAR*
Ga0066708_104901362	3300005576	Soil	LRSGRLDEFERMVLKAFQRKVSAEVPVPLGATDVPEYPERKPNAG*
Ga0070761_108225163	3300005591	Soil	EFEKLVLKAFQRKVSAEVPIPPGAEDIPDYSKRDVDAR*
Ga0068861_1024178333	3300005719	Switchgrass Rhizosphere	FEELVLEAFQRKVAADVPVPSGATDIPDYPERSADAR*
Ga0066903_1011850491	3300005764	Tropical Forest Soil	RLRTYQADEFEKMVLKAFQRKVSSEVPIPPGATDIPDYSERGADAR*
Ga0070766_102698643	3300005921	Soil	ERIRAGRPDKFEQMVLEAFQKKVAVEVPLPPGAVEIPDYPKRGIDAR*
Ga0070712_1016927181	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LRTRQPDKFEQMVLEAFQKKVSADVPVPPGASDIPDYP*
Ga0079222_115358823	3300006755	Agricultural Soil	KRLRTKQADMFEELVLEAIQRKVSADVPVPSGATDIPDYPERKADAR*
Ga0075433_108069081	3300006852	Populus Rhizosphere	RQPDKFEQMVLEAFQKKVSADVPVPPGASDIPDYP*
Ga0105251_104617951	3300009011	Switchgrass Rhizosphere	QANKFEELILEAFQAKVAAQVPVPPGADSISDYPERGRDAG*
Ga0099830_105742454	3300009088	Vadose Zone Soil	RSQQADSFEELVLEAFQKKVTAEVPVPPGADSIPDYPERGPDAR*
Ga0099828_119274242	3300009089	Vadose Zone Soil	ERLRTQQADEFEKMVLKAFQRKVSAEIPVPPGAADIPDYPERGADAR*
Ga0105245_115127993	3300009098	Miscanthus Rhizosphere	EFEKMVLKAFQRKVSADVPAPLGSMDIRDYPERNPNAG*
Ga0105245_128074751	3300009098	Miscanthus Rhizosphere	RTHQADKFEQIVLEAFEKKVAAEVPVPPGAADIPDYP*
Ga0116225_12870612	3300009524	Peatlands Soil	LRSRQSDKPDKFEQMVLEAFQKKVTAEVPVPPGADGIPDYPERGADAR*
Ga0116223_101642863	3300009839	Peatlands Soil	TKQAVVFEGRVMEAFQKKVTAEVPVPPRATDIPDYLMRGADAR*
Ga0126384_124959891	3300010046	Tropical Forest Soil	HDAYKQLRTQQVDEFEKMVLRAFQRKVSADVPTPLGAADISADLERGSDGR*
Ga0074046_104778271	3300010339	Bog Forest Soil	FEELVLEAFQKKVTAEVPVPPGVDSIPDYPERGADAR*
Ga0074046_109228031	3300010339	Bog Forest Soil	ELEIMVLRAFQREVSAAIPVPPGAEDIPDYPERGRNAG*
Ga0126379_111886182	3300010366	Tropical Forest Soil	YKRLRTQQADALEELVLEAFQRKVCADVPVPAGATDIPDYP*
Ga0134128_114917533	3300010373	Terrestrial Soil	DEFEKMVLKAFQRKVSADVPAPLGATDIPDYPERKPNAG*
Ga0136449_1001976201	3300010379	Peatlands Soil	ERLRSHRADAFEELVLEAFQKKVTGEVPVPPGADDIPDYPERGADAR*
Ga0136449_1034835362	3300010379	Peatlands Soil	LRSHQADAFEELVLEAFQKKVTAEVPVPAGAESIPDHPERDADAR*
Ga0126383_132560733	3300010398	Tropical Forest Soil	THQADIFEELVLEAFQAKIVGEVPVPPGAVDVPDCP*
Ga0150983_135747351	3300011120	Forest Soil	VDEFEKMVLKAFQRKVSADVPIPPGATDIPDYPERGSDGR*
Ga0137392_112348261	3300011269	Vadose Zone Soil	LVLEAFQKKVTAEVPVPPGADGIPDYPERGADAR*
Ga0137379_103399244	3300012209	Vadose Zone Soil	DLVLEAFQKKVTAEVPVPLGADGIPDYPERGADAR*
Ga0137377_113499061	3300012211	Vadose Zone Soil	FEQMVLEAFQRKVTGEVPVPRGAADIPDYPERGSDAR*
Ga0164303_100239941	3300012957	Soil	QQVDEFEKMVLKAFQRKVSADVPTPLGAADISAYPKRGSDGR*
Ga0164308_108434301	3300012985	Soil	NQRVDAFEKMVLKAFQRKVSADVPIPPGAADIPDYPERGSDAR*
Ga0157379_120433142	3300014968	Switchgrass Rhizosphere	RSGQLDEFEKMVLKAFQRKVSADVPAPLGSMDIRDYPERNPNAG*
Ga0132257_1026823982	3300015373	Arabidopsis Rhizosphere	MVLEAFEAKVTAEVPVPPGATDIPNYPERVADAR*
Ga0182032_117211661	3300016357	Soil	QADEFEKMVLKAFQRKVSAGVPVPHGATDIPDYSERDADAR
Ga0182034_112712723	3300016371	Soil	KQADAFEELVLEAFQKKVTSDVPVPPGATDIPDYLERSADAR
Ga0187807_11211171	3300017926	Freshwater Sediment	RLRIKQADKFEQMVLEAFQAKVTAEVPVPPGATDIPNYP
Ga0187806_10422941	3300017928	Freshwater Sediment	YERIRSKQADAFEELVLEAFQKKVTADVPVPPGAADIPDYRKEA
Ga0187779_103371581	3300017959	Tropical Peatland	ELEQLVLEAFQRKVTADVPIPPRATDIPDYRQRGVDAR
Ga0187781_110856721	3300017972	Tropical Peatland	QTQRPDKLEQMVLEAFQRKVTAEIPVPYGAADIPDYPERGSDAR
Ga0187777_102952381	3300017974	Tropical Peatland	ERLRSEPKPDPFEQMVLEAFQKKITVEVPIPPGAADIPDYSKRDTDAR
Ga0187777_112255771	3300017974	Tropical Peatland	QADEFEKMVLKAFQRNVSAEVPVPLGATDVPDYSERDADAR
Ga0187815_104539651	3300018001	Freshwater Sediment	KQADKFEQMVLEAFQAKVTAEVPVPPGATDIPDYP
Ga0187885_105377481	3300018025	Peatland	RLRSKQADVLEDLVLEAFQKKVTAEVPVPSGADGIPDYPERKADAR
Ga0187871_103564283	3300018042	Peatland	ELVLEAFQKKVTGEVPVPPGADGIPDYPERRADAR
Ga0187851_108141132	3300018046	Peatland	DEFEKMVLKAFQQRVSAEIPVPPGAADIPDYPERGADAR
Ga0210395_104855531	3300020582	Soil	ERLRSHQADAFEEMVLHAFQRKVATEVPVPPGAADIPEYPERVNAR
Ga0210401_109872583	3300020583	Soil	QADEFEKMVLKAFQRKVSAEVPVPPGAADIPDYSERDADAR
Ga0213882_105165592	3300021362	Exposed Rock	ERLRTKKANKFEELVLEAFQSKVSAEVPVPPGAIDIPDYLQRGTDAK
Ga0210383_101397101	3300021407	Soil	QMVLEAFQKKVVSEIPVPPGALDIPDYSRRGVDAR
Ga0210383_113694741	3300021407	Soil	EELVLEAFQKRVSCAVPVPAGAADIPDYPERKRHAR
Ga0210409_103859091	3300021559	Soil	VDEFEKMVLKAFQRKVSADVPIPPGATDIPDYPERGSDGR
Ga0126371_133520501	3300021560	Tropical Forest Soil	LRTHQADKFEQMVLEAFQNKVTAEVPIPPGAADIPDYP
Ga0247667_11022002	3300024290	Soil	DAYDRIRSHQADKFEQIVLEAFQKKVADDVPTPPGAADIPDYP
Ga0208589_10859451	3300025634	Arctic Peat Soil	FEELVLEAFQKKVTADVPLPPGAADIPDYPERGADAR
Ga0207665_109558383	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	RCRTNQADEFEKMVLNAFQRKVSTEVAVPPGAVDIPDYP
Ga0207702_111312563	3300026078	Corn Rhizosphere	FEKMVLKAFQRKVSAEVPVPPHAAAIPDYPERDADAR
Ga0209648_107068523	3300026551	Grasslands Soil	SQQADKFEELVLEAFQRKVTGDVPVPPGAADIPDYP
Ga0209167_102862983	3300027867	Surface Soil	ADEFEEMVLEAFQRKVSAAVPVPPGAAEIPDYPERGPDAGQGHLLRDR
Ga0209169_103070091	3300027879	Soil	ADMFEELVLEAFQKKVTAEVPVPRGSDGIPDYPERKADAR
Ga0209590_104051101	3300027882	Vadose Zone Soil	RSQQADSFEELVLEAFQKKVTAEVPVPPGADSIPDCPERGADAR
Ga0209415_100468987	3300027905	Peatlands Soil	ADKFEELVLEAFQKKVTTEVPVPPGADSIPDYPERGADAR
Ga0302219_103886091	3300028747	Palsa	GQPDKFEQMVLEAFQKKVTAEVSVPFGAESIPDYSERKADAR
Ga0302228_102728231	3300028808	Palsa	TQQADKFEQMVLEAFQKKVTADVPVPLGAESIPDYPERKADAR
Ga0302235_101616591	3300028877	Palsa	LRTGQPDKFEQMVLEAFQKKVIAEVPIPSGADGIPDYPERKADAR
Ga0302229_102068163	3300028879	Palsa	ADAFEELVLEAFQKKVTADVPVPSGADGIPDYAERKADAG
Ga0311339_112869893	3300029999	Palsa	KQADIFEELVLEAFQKKVTAEVPVPSGADGIPDYPERKADAR
Ga0302178_102295311	3300030013	Palsa	SKQADMFEELVLEAFQKKVTAEVPVPSGADGIPDYSERKADAR
Ga0302178_104618533	3300030013	Palsa	KLEQLLLEAFQKKVTADVPVPPGAADIPDYPKRGADAG
Ga0302176_103393032	3300030057	Palsa	SLEELVLEAFQKKVAAEVPVPLGAESIPDYPERKADAR
Ga0302184_101274261	3300030490	Palsa	QPDKFEQMVLEAFQKKVIAEVPIPSGADGIPDYPERKADAR
Ga0302184_102384461	3300030490	Palsa	FEELVLEAFQKKVTAEVPVPPGADGIPDYPERKADAR
Ga0311370_106642944	3300030503	Palsa	ERLRSKQADQFEELVLEAFQKKVTAEVPVPLGAESIPDYPERKADAR
Ga0311355_100443357	3300030580	Palsa	ERLRTQQADKFEQMVLEAFQKKVTADVPVPLGAESIPDYPERKADAR
Ga0310039_102688952	3300030706	Peatlands Soil	QADAFEELVLEAFQKKVTAEVPVPAGAESIPDHPERDADAR
Ga0302314_107452941	3300030906	Palsa	RTGQPDKFEQMVLEAFQKKVIAEVPIPSGADGIPDYPERKADAR
Ga0302308_1000397313	3300031027	Palsa	FEELVLEAFQKKVTAEVPVPLGAESIPDYPERGADAR
Ga0302180_106140552	3300031028	Palsa	KFEELVLEAFQKKVTAEVPVPPGAGGIPDYPERVTDAR
Ga0302325_131044942	3300031234	Palsa	RSQQADKFEQMVLEAFQKKVTADVPVPPGADSIPDYQKRGSDAR
Ga0302326_108359224	3300031525	Palsa	LEELVLEAFQKKVTAEVPVPPGADGIPDYPERGRDAR
Ga0302326_135353412	3300031525	Palsa	YERLRSKQADKFEELVLEAFQKKVTAEVPVPPGADGIPDYPERGADAR
Ga0318516_101405764	3300031543	Soil	TQKADKFEELVLEAFEKKVTADVPVPPGAADVNGYIKRGADAR
Ga0318561_106719763	3300031679	Soil	AFEELVLEAFQKKVTAEVPVPPGANDIPDYPERGRYAG
Ga0318574_107389982	3300031680	Soil	KRLRTHQADKFEQMVLEAFQKKVSADVPIPPGAADIPDYP
Ga0310686_1024363421	3300031708	Soil	ELVLEAFEKKVTSEVPVPSGAADISDYPKRGTDAR
Ga0310686_1062293752	3300031708	Soil	AYERLRTQQADKFEELVLEAFQKKVSADVPVPRGAADIPDYP
Ga0318501_102816091	3300031736	Soil	GDEFEKMVLKAFQRKVSAEVPVPPGATDIPDYSERDADAR
Ga0318502_106266402	3300031747	Soil	YKRLRTHQADKFEQMVLEAFQKKVSADVPIPPGAADIPDYP
Ga0318494_107948192	3300031751	Soil	LRTHQADKFEQIVLEAFQKKVAADVPIPPGAEDIPDYP
Ga0318497_101787311	3300031805	Soil	THQADKFEHMVLEAFQKKVSADVPVPPGATDIPDHP
Ga0318497_104599581	3300031805	Soil	ERLRSKQADVFEELVLEAFQKKVAGEVPVPPGAADIPDYP
Ga0310917_107367983	3300031833	Soil	EEMVLEAFQKKVAAEVPVPPGAADIPDYPKRGRDAR
Ga0318512_104707531	3300031846	Soil	RTHQADKFEQMVLEAFQKKVSADVPIPPGAADIPDYP
Ga0306919_102817211	3300031879	Soil	ELVLEAFEKKVTADVPVPPGAADVNGYIKRGADAR
Ga0318522_103517391	3300031894	Soil	LRTHQPDKFEQMVLEAFQRKVTADVPVPSGATDIPDHP
Ga0306922_122789192	3300032001	Soil	ADKFEELVLEAFQRKVTADVPIPPGAVDIPDYPKRGTDAR
Ga0318562_104673321	3300032008	Soil	RTHQADVFEELVLEAFQRKVSADVPVPNGATDVPDHP
Ga0318524_105204283	3300032067	Soil	RIRSKQADTFEDLVLEAFQKKVTADVPVPPGAADIPDHRKEA
Ga0306924_119025613	3300032076	Soil	QADEFEKMVLKAFQRKVSAEIPIPLGAADIPGYSERDADAR
Ga0311301_118240161	3300032160	Peatlands Soil	ERIRSKQADALEELVLEAFQKKVTADVPVPPGAADIPDYRKEA
Ga0335085_122935521	3300032770	Soil	YERLRTHQADKFEQMVLEAFQKKVSADVAIPPGAADIPDYS
Ga0335082_113905082	3300032782	Soil	YEQIRTGQVDEFERMVLKAFQRKVSAEIPIPPGAVDIPDYPERGADAR
Ga0335080_116317673	3300032828	Soil	IRTKQANKFEQMVLEAFQGKVTADVPVPLGATDVPDYP
Ga0335081_115951161	3300032892	Soil	DEFEKMILKAFQRKVSAEISVPPGAADIPNCSERGTDAR
Ga0335073_112398063	3300033134	Soil	EFEKMVLKAFQRKVSSEVPVPPGATDIPDYPERSADAR
Ga0335077_104019584	3300033158	Soil	AYKRLWSHQADKFEELVLEAFQKKVAAEVPVPPGAADIPDYP

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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