Basic Information | |
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Family ID | F090668 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 108 |
Average Sequence Length | 49 residues |
Representative Sequence | ANSEWFYSRDHGGKLVVSKKAHRDDQFGQMAEGDFGEIARDFVCKQK |
Number of Associated Samples | 93 |
Number of Associated Scaffolds | 108 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 18.52 % |
% of genes from short scaffolds (< 2000 bps) | 18.52 % |
Associated GOLD sequencing projects | 88 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.28 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (83.333 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.889 % of family members) |
Environment Ontology (ENVO) | Unclassified (24.074 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (63.889 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 20.00% β-sheet: 16.00% Coil/Unstructured: 64.00% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.28 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 108 Family Scaffolds |
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PF00132 | Hexapep | 7.41 |
PF06426 | SATase_N | 3.70 |
PF01551 | Peptidase_M23 | 1.85 |
PF01564 | Spermine_synth | 1.85 |
PF08238 | Sel1 | 0.93 |
PF04255 | DUF433 | 0.93 |
PF02878 | PGM_PMM_I | 0.93 |
PF02769 | AIRS_C | 0.93 |
PF13906 | AA_permease_C | 0.93 |
PF16916 | ZT_dimer | 0.93 |
PF01197 | Ribosomal_L31 | 0.93 |
PF06114 | Peptidase_M78 | 0.93 |
COG ID | Name | Functional Category | % Frequency in 108 Family Scaffolds |
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COG1045 | Serine acetyltransferase | Amino acid transport and metabolism [E] | 3.70 |
COG0033 | Phosphoglucomutase/phosphomannomutase | Carbohydrate transport and metabolism [G] | 0.93 |
COG0254 | Ribosomal protein L31 | Translation, ribosomal structure and biogenesis [J] | 0.93 |
COG1109 | Phosphomannomutase | Carbohydrate transport and metabolism [G] | 0.93 |
COG2442 | Predicted antitoxin component of a toxin-antitoxin system, DUF433 family | Defense mechanisms [V] | 0.93 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 83.33 % |
All Organisms | root | All Organisms | 16.67 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300001084|JGI12648J13191_1033128 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 513 | Open in IMG/M |
3300002245|JGIcombinedJ26739_101514620 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 566 | Open in IMG/M |
3300004092|Ga0062389_103713377 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 573 | Open in IMG/M |
3300004104|Ga0058891_1328001 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 509 | Open in IMG/M |
3300007788|Ga0099795_10539545 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 548 | Open in IMG/M |
3300009638|Ga0116113_1019712 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1480 | Open in IMG/M |
3300009683|Ga0116224_10643816 | Not Available | 507 | Open in IMG/M |
3300014654|Ga0181525_10696512 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 570 | Open in IMG/M |
3300018042|Ga0187871_10178294 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1193 | Open in IMG/M |
3300018086|Ga0187769_11138792 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 590 | Open in IMG/M |
3300021178|Ga0210408_11433466 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 519 | Open in IMG/M |
3300021181|Ga0210388_10450431 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae | 1131 | Open in IMG/M |
3300021401|Ga0210393_11645471 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 508 | Open in IMG/M |
3300022523|Ga0242663_1103431 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 570 | Open in IMG/M |
3300025320|Ga0209171_10608578 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 525 | Open in IMG/M |
3300027824|Ga0209040_10148737 | All Organisms → cellular organisms → Bacteria | 1267 | Open in IMG/M |
3300028759|Ga0302224_10448508 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 526 | Open in IMG/M |
3300028882|Ga0302154_10341141 | Not Available | 730 | Open in IMG/M |
3300031258|Ga0302318_10062432 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis | 1552 | Open in IMG/M |
3300032160|Ga0311301_12823601 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 530 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 13.89% |
Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 11.11% |
Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 9.26% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 7.41% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 7.41% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 7.41% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 6.48% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 5.56% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland | 5.56% |
Bog | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog | 4.63% |
Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 3.70% |
Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 2.78% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.85% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.85% |
Palsa | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa | 1.85% |
Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 1.85% |
Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 0.93% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.93% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.93% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.93% |
Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.93% |
Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland | 0.93% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.93% |
Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.93% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300001084 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 | Environmental | Open in IMG/M |
3300001546 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 | Environmental | Open in IMG/M |
3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
3300004092 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004104 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300005554 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 | Environmental | Open in IMG/M |
3300005602 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 | Environmental | Open in IMG/M |
3300005712 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 | Environmental | Open in IMG/M |
3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Environmental | Open in IMG/M |
3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Environmental | Open in IMG/M |
3300009524 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG | Environmental | Open in IMG/M |
3300009623 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 | Environmental | Open in IMG/M |
3300009638 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 | Environmental | Open in IMG/M |
3300009645 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 | Environmental | Open in IMG/M |
3300009683 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG | Environmental | Open in IMG/M |
3300009700 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG | Environmental | Open in IMG/M |
3300009762 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40 | Environmental | Open in IMG/M |
3300009824 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG | Environmental | Open in IMG/M |
3300009839 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG | Environmental | Open in IMG/M |
3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
3300012351 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG | Environmental | Open in IMG/M |
3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
3300012917 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG | Environmental | Open in IMG/M |
3300014165 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG | Environmental | Open in IMG/M |
3300014169 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG | Environmental | Open in IMG/M |
3300014489 | Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG | Environmental | Open in IMG/M |
3300014495 | Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG | Environmental | Open in IMG/M |
3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
3300014654 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG | Environmental | Open in IMG/M |
3300014655 | Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG | Environmental | Open in IMG/M |
3300017946 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10 | Environmental | Open in IMG/M |
3300018034 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10 | Environmental | Open in IMG/M |
3300018038 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10 | Environmental | Open in IMG/M |
3300018042 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10 | Environmental | Open in IMG/M |
3300018086 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG | Environmental | Open in IMG/M |
3300019278 | Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019786 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction) | Environmental | Open in IMG/M |
3300020580 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M | Environmental | Open in IMG/M |
3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
3300021181 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O | Environmental | Open in IMG/M |
3300021401 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O | Environmental | Open in IMG/M |
3300021402 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O | Environmental | Open in IMG/M |
3300021405 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O | Environmental | Open in IMG/M |
3300021433 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O | Environmental | Open in IMG/M |
3300021474 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O | Environmental | Open in IMG/M |
3300021475 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O | Environmental | Open in IMG/M |
3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
3300022523 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300023056 | Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2 | Environmental | Open in IMG/M |
3300025320 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025412 | Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes) | Environmental | Open in IMG/M |
3300027521 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300027609 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes) | Environmental | Open in IMG/M |
3300027701 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes) | Environmental | Open in IMG/M |
3300027767 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes) | Environmental | Open in IMG/M |
3300027824 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes) | Environmental | Open in IMG/M |
3300027853 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes) | Environmental | Open in IMG/M |
3300028565 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3 | Environmental | Open in IMG/M |
3300028748 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2 | Environmental | Open in IMG/M |
3300028759 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1 | Environmental | Open in IMG/M |
3300028779 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2 | Environmental | Open in IMG/M |
3300028780 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2 | Environmental | Open in IMG/M |
3300028866 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2 | Environmental | Open in IMG/M |
3300028882 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3 | Environmental | Open in IMG/M |
3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
3300029910 | III_Palsa_E2 coassembly | Environmental | Open in IMG/M |
3300029917 | I_Bog_E1 coassembly | Environmental | Open in IMG/M |
3300029919 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2 | Environmental | Open in IMG/M |
3300029945 | I_Bog_N2 coassembly | Environmental | Open in IMG/M |
3300029951 | III_Palsa_N1 coassembly | Environmental | Open in IMG/M |
3300030049 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1 | Environmental | Open in IMG/M |
3300030053 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2 | Environmental | Open in IMG/M |
3300030054 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1 | Environmental | Open in IMG/M |
3300030520 | III_Palsa_N2 coassembly | Environmental | Open in IMG/M |
3300030580 | II_Palsa_N1 coassembly | Environmental | Open in IMG/M |
3300030706 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2) | Environmental | Open in IMG/M |
3300031233 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2 | Environmental | Open in IMG/M |
3300031236 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1 | Environmental | Open in IMG/M |
3300031258 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1 | Environmental | Open in IMG/M |
3300031525 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3 | Environmental | Open in IMG/M |
3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
3300031823 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 | Environmental | Open in IMG/M |
3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
3300032898 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1 | Environmental | Open in IMG/M |
3300033828 | Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5 | Environmental | Open in IMG/M |
3300034163 | Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12648J13191_10331282 | 3300001084 | Forest Soil | SRDHGGTLVVSKKTRRDDQFGQMAEGDFGGIAREFVCKQK* |
JGI12659J15293_101021022 | 3300001546 | Forest Soil | SVPSVVANSEWFYSRDHGGKVVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQK* |
JGI12635J15846_106748291 | 3300001593 | Forest Soil | HGGTLVVSKKTRRDDQFGQMAEGDFGGIAREFVCKQK* |
JGIcombinedJ26739_1000441011 | 3300002245 | Forest Soil | GSAVTNSEWFYSRDRNGKLVVSKKMRHDDQFGQAAEGNFGEMAREFVCKQR* |
JGIcombinedJ26739_1015146201 | 3300002245 | Forest Soil | SSVVANSEWFYSRDHGGKVVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQK* |
Ga0062384_1004403052 | 3300004082 | Bog Forest Soil | SRDHGGKLVVSKKTRRDDQFGQIAEGDFGSIARDFVCKQ* |
Ga0062389_1021426321 | 3300004092 | Bog Forest Soil | ANSEWFYSRDHGGKLVVSKKAHRDDQFGQMAEGDFGEIARDFVCKQK* |
Ga0062389_1037133772 | 3300004092 | Bog Forest Soil | SAAPSVATNSEWLYSRDRGGKVVVSKKMRRDDHFGQMSEGGFGDIAKDFVCKQK* |
Ga0058891_13280011 | 3300004104 | Forest Soil | NSEWFYSRDRSGKLVVSKKARRDDLFGAEAEGGFGTIARDFVCQQK* |
Ga0066661_102288811 | 3300005554 | Soil | AEWLYARDRNGKLVVSKKTRRDDEFGQPSEGGFIEMDSKYVCGQSR* |
Ga0070762_102278231 | 3300005602 | Soil | SEWFYSRDHGGKVVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQK* |
Ga0070762_110953741 | 3300005602 | Soil | RARVRFNCASGSAVPGVAVSSEWFYSREHGKLVVSKKTHRDDQFGQVAEGDFGEIARDFVCKQK* |
Ga0070764_102719161 | 3300005712 | Soil | RNGKLVVSKKMRHDDQFGLAAEGNFGEMAREFVCKQR* |
Ga0070765_1001801094 | 3300006176 | Soil | ASIVPNSEWFYSRDRGGKLVVSKKARRDDQFGQLAEGDFGEIARDFVCKQK* |
Ga0079219_115850902 | 3300006954 | Agricultural Soil | WFYSRDHGGKIVVSKKAARDSQFGQELEGGFEEMARDYVCKQK* |
Ga0099794_102727631 | 3300007265 | Vadose Zone Soil | DRSGKLVVSKKTRRDDEFGQQSEGGFIEIASKYVCGQSR* |
Ga0099795_105395453 | 3300007788 | Vadose Zone Soil | VRFNCASGSFLPNSEWLYSRDRSGKLVVSKKTHRDDQFGQVAEGNFGEMAREFVCKQK* |
Ga0116225_12423371 | 3300009524 | Peatlands Soil | RVRFNCAGGVAVPIAVANSEWFYSRERGGKLVVSKKTHRDDQFGRSAEGGFGEMARDFVCKQK* |
Ga0116133_10029621 | 3300009623 | Peatland | WFYSRDHSGKLVVSKKSGRDDQFGQISEGNFREMARDFVCGQK* |
Ga0116113_10197123 | 3300009638 | Peatland | RFNCSSGSEVPNSEWFYSRDHGGTLVVSKKARRDDQFGQTAEGDFGGIAREFVCKQK* |
Ga0116113_11092222 | 3300009638 | Peatland | RVRFGCGSGSAIPTAEWFYSRDRGGKFVVSKKTHRDDQFGAVAEGGFGGLVSKFVCEQK* |
Ga0116106_10876193 | 3300009645 | Peatland | AVSNSEWFYSRDHSGKLVVSKKSRRDDQFGQISEGNFREMARDFVCGQK* |
Ga0116224_106438161 | 3300009683 | Peatlands Soil | SVVANSEWFYSRDHGKLVVSKKTHRDDQFGQAAEGDFGEIARDFVCKQK* |
Ga0116217_105613022 | 3300009700 | Peatlands Soil | SEWFYSRDRSGKLVVSKKTRRDDQFGQVSEGNFGEMAKDFVCKQK* |
Ga0116130_11427191 | 3300009762 | Peatland | LRARVHFNCASGSAVPNSEWFYSRDHSGKLIVSKKTRRDDQFGQVAEGDFGEIARDYVCKQK* |
Ga0116219_100229344 | 3300009824 | Peatlands Soil | AVPIAVANSEWFYSRERGGKLVVSKKTHRDDQFGRSAEGGFGEMARDFVCKQK* |
Ga0116223_101259003 | 3300009839 | Peatlands Soil | PIAVANSEWFYSRERGGKLVVSKKTHRDDQFGRSAEGGFGEMARDFVCKQK* |
Ga0074044_107322862 | 3300010343 | Bog Forest Soil | GSAVPNSMWFYSRDHSGQLVVSKKARHDDQFGEESEGGFGEVAKDFVCKQ* |
Ga0074044_108631082 | 3300010343 | Bog Forest Soil | FYSRDRGGKVVVSKKTKRDDQFGKSAEGDFGGMAREFVCKQ* |
Ga0074044_110251911 | 3300010343 | Bog Forest Soil | IAVANSEWFYSRERGGKLVVSKKTHRDDQFGRSTEGGFGEIARDFVCKQK* |
Ga0137392_104801163 | 3300011269 | Vadose Zone Soil | EWLYARDRSGKLVVSKKTRRDDEFGQQSEGGFIEIASKYVCGQSR* |
Ga0137386_104391341 | 3300012351 | Vadose Zone Soil | DRNGKLVVSKKTRRDDEFGQPSEGGFIEMASKYVCGQSR* |
Ga0137390_113402232 | 3300012363 | Vadose Zone Soil | CASDAGPGVVANSEWFYSRDRSGKLVVSTKMRHDDQFGQVAEGGFGDMAREFVCKQK* |
Ga0137395_102722063 | 3300012917 | Vadose Zone Soil | SGTAVPNAEWFYSRDRGGKLIVSKKTHRDDQFGQEAQGNFGAMVREFVCKQK* |
Ga0137395_112155772 | 3300012917 | Vadose Zone Soil | PSAEWLYARDRSGKLVVSKKTRRDDEFGQQSEGGFIEIASKYVCGQSR* |
Ga0181523_102627091 | 3300014165 | Bog | RARVRFNCGSGNAVTNSEWFYSRDRGGKLVVSKKTRRDDQFGQASEGNFGEMVRDFVCKQK* |
Ga0181531_102897161 | 3300014169 | Bog | GSAVPNSEWFYSRDHSGKLIVSKKTRRDDQFGQVAEGDFGEIARDYVCKQK* |
Ga0182018_105202692 | 3300014489 | Palsa | SEWFYSRDHGGKLVVSKKTRRDDQFGQTAEGDFGGIAREFVCGQK* |
Ga0182015_101349351 | 3300014495 | Palsa | RNGKLVVSKKLRHGDQFGQAAEGNFGEMAREFVCKQR* |
Ga0182024_129214402 | 3300014501 | Permafrost | FYSRDHSGKLVVSKKSRRDDQFGQISEGNFREIARDFVCGQK* |
Ga0181525_100750251 | 3300014654 | Bog | KLVVSKKARRDDQFGQVAEGDFGEIARDFVCKQK* |
Ga0181525_106965122 | 3300014654 | Bog | YSRDHGGTLVVSKKARRDDQFGQTAEGDFGGIAREFVCAQK* |
Ga0181516_101797923 | 3300014655 | Bog | SRDHGGQLVVSKKLRRDDQFGQAAEGGFGAMARNYVCGAK* |
Ga0187879_105349962 | 3300017946 | Peatland | VAVNSEWFYSRDHGKLVVSKKTHRDDQFGQVAEGDFGAIARDFVCKQK |
Ga0187863_105493212 | 3300018034 | Peatland | WFYSRDHGGQLVVSKKTRRDDQFGQMAEGDFGAMAREFVCKQK |
Ga0187855_104493342 | 3300018038 | Peatland | VNSEWFYSRDHGKLVVSKKTHRDDQFGQVAEGDFGAIARDFVCKQK |
Ga0187871_101782941 | 3300018042 | Peatland | VELRARVRFDCSGGSTAAGVVTTSEWFYSRDRSGKLVVSKKARRDDQFGQLSEGGFGNLARGFVCKQ |
Ga0187769_111387921 | 3300018086 | Tropical Peatland | VANWEWFYSRDRSGKLVVSKKTRRDDQFGQLAEGGFGDLAKDFVCKQK |
Ga0187800_15764073 | 3300019278 | Peatland | PEWFYSRDRSGKLVVSKKTRRDDQFGQVAEGGFGDMAKDFVCSQK |
Ga0182025_11045742 | 3300019786 | Permafrost | RFNCVSGSATPNSEWFYSADHSGKLVVSKKTRHDDQFGQLSEGNFGEMAKDFVCKQK |
Ga0210403_105973791 | 3300020580 | Soil | MPNSEWFYSRDRSGKLVVSKKARRDDLFGAEAEGGFGTIARDFVCQQK |
Ga0210400_103189821 | 3300021170 | Soil | VSGSATTNSEWFYSADHSGRLVVSKKARRDDQFGQVAEGNFGELAKDFVCKQK |
Ga0210408_109511761 | 3300021178 | Soil | NCASSSAVPGVVANSEWFYSRDHGGKLVVSKKTRHDDQFGQVAEGDFGEMAREFVCKQK |
Ga0210408_114334661 | 3300021178 | Soil | APTALWFYSRDRGGKIVVSKKAAHDDQFGRETEGGFGEMVRTYVCAQK |
Ga0210396_101750144 | 3300021180 | Soil | YNCASGSAMPNSEWFYSRDRSGKLVVSKKARRDDLFGAEAEGGFGTIARDFVCQQK |
Ga0210388_104504313 | 3300021181 | Soil | VELRARVRFDCASRTAVPNSEWFYSRDHGGKLVVSKKSRRDDQFGSTTEGGFGDIARDFVCKQK |
Ga0210393_116454712 | 3300021401 | Soil | SEWFYSREHGKLVVSKKTHRDDQFGQVAEGDFGEIARDFVCKQK |
Ga0210385_106222352 | 3300021402 | Soil | SEWFYSRDHGGKLVVSKKTRRDDQFGQTAEGDFGGIAREFVCGQK |
Ga0210387_113262071 | 3300021405 | Soil | SAVPSVVANSEWFYSRDHGGKLVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQK |
Ga0210391_106341501 | 3300021433 | Soil | RFNCASGSSVPSVVANSEWFYSRDHGGKVVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQ |
Ga0210390_104065683 | 3300021474 | Soil | VPSVVANSEWFYSRDHGGKVVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQK |
Ga0210392_102806353 | 3300021475 | Soil | GRLVVSKKARRDDQFGQVAEGNFGELAKDFVCKQK |
Ga0210409_107456201 | 3300021559 | Soil | RVRFNCASGSAVPNSEWFYSRDRSGKLVVSKKTRRDDQFGQVTEGDFGGIAKEFVCKQK |
Ga0242663_11034312 | 3300022523 | Soil | FNCASGSTTPSVVANSEWFYSRDHGGKLVVSKKAHRDDQFGQTSEGDFGEIAKDFVCKQK |
Ga0233357_10460671 | 3300023056 | Soil | FYSRDHSGKLVVSKKMRHDDQFGQVAEGGFGDMAREFVCKQK |
Ga0209171_106085782 | 3300025320 | Iron-Sulfur Acid Spring | RARVHFNCASGSAVTNSEWFYSRDRNGKLVVSKKMRHDDQFGQAAEGNFGEMAREFVCKQ |
Ga0208194_10487281 | 3300025412 | Peatland | WFYSRDHSGKLVVSKKSGRDDQFGQISEGNFREMARDFVCGQK |
Ga0209524_11189901 | 3300027521 | Forest Soil | YSRDRSGKLVVSKKTRRDDEFGKQSEGGFIEIASKYVCGQSR |
Ga0209221_10052291 | 3300027609 | Forest Soil | RVRFNCASGSAVSNSEWFYSRDHSGKLVVSKKTRHDDQFGEEAEGNFGELARDFVCKQK |
Ga0209447_101445961 | 3300027701 | Bog Forest Soil | RFNCASDGIAGVAVNSEWFYSRDHGKLVVSKKTRRDDQFGQIAEGDFGEIARDFVCKQK |
Ga0209655_102419812 | 3300027767 | Bog Forest Soil | RVRFNCASGSAVPNSEWFYSRDHSGKLVVSKKARRDDEFGQVAEGNFGELTREFVCKQK |
Ga0209040_101487371 | 3300027824 | Bog Forest Soil | RARVRFNCASGSAVPGVVTTSEWFYSRDHSGKLVVSKKARHDDQFGQVSEGGFGDLAREFVCKQ |
Ga0209274_104646851 | 3300027853 | Soil | GKLVVSKKAHRDDQFGQTSEGDFGEIAKDFVCKQK |
Ga0302145_101249942 | 3300028565 | Bog | RGGKLMVSKKARRDDQFGQAPEGGFGDMARDFVCKQK |
Ga0302156_100352004 | 3300028748 | Bog | VRFNCASGSAAPSAVSNSEWFYSRDRSGKLVVSKKIHRDDQFGQVAEGDFGEIAREFVCKQK |
Ga0302224_104485081 | 3300028759 | Palsa | TSGSAVSNSEWFYSRDRGGKLVVSKKTRRDDQFGQVAEGDFGGIAREFVCKQK |
Ga0302266_103453851 | 3300028779 | Bog | FYSRDRSGKLVVSKKTHRDDQFGQVAEGDFGEIAREFVCKQK |
Ga0302225_101984442 | 3300028780 | Palsa | EWFYSRDRGGKLVVSKKTRRDDQFGQVAEGDFGGIAREFVCKQK |
Ga0302278_100887201 | 3300028866 | Bog | SRDRGGKLMVSKKARRDDQFGQAPEGGFGDMARDFVCKQK |
Ga0302154_103411412 | 3300028882 | Bog | YSRDHGGTLVVSKKARRDDQFGQTAEGDFGGIAREFVCKQK |
Ga0308309_102453431 | 3300028906 | Soil | ARVRFNCVSGSAVPNSEWFYSRDRGGKLVVSKKTRRDDQFGQTAEGDFGGIAREFVCGQK |
Ga0308309_107926861 | 3300028906 | Soil | HGKLVVSKKTHRDDQFGQVEEGDFGEMARDFVCKQK |
Ga0308309_110689231 | 3300028906 | Soil | FNCSGGAEATGVASIVPNSEWFYSRDRGGKLVVSKKARRDDQFGQLAEGDFGEIARDFVCKQK |
Ga0311369_104899532 | 3300029910 | Palsa | MPNSEWLYSRDRNGKLVVSKKTHRDDQFGQMAEGNFGEIARNFVCTQK |
Ga0311326_103265342 | 3300029917 | Bog | SGSAAPSAVSNSEWFYSRDRSGKLVVSKKIHRDDQFGQVAEGDFGEIAREFVCKQK |
Ga0302141_11068302 | 3300029919 | Bog | SAVSNSEWFYSRDRSGKLVVSKKIHRDDQFGQVAEGDFGEIAREFVCKQK |
Ga0311330_110409902 | 3300029945 | Bog | GVPTAVSNSEWFYSRDRSGKLVVSKKTHRDDQFGQVAEGDFGEIAREFVCKQK |
Ga0311371_119459572 | 3300029951 | Palsa | ARVRFNCTSGSAVPNSEWFYSRDRGGKLVVSKKSRRDDQFGQTAEGDFGGIAREFVCGQK |
Ga0302191_102757352 | 3300030049 | Bog | EWFYSRDRGGKLMVSKKARRDDQFGQAPEGGFGDMARDFVCKQK |
Ga0302177_101661921 | 3300030053 | Palsa | LRARVRFNCASGSAMPNSEWLYSRDRNGKLVVSKKTHRDDQFGQMAEGNFGEIARNFVCTQK |
Ga0302182_100901681 | 3300030054 | Palsa | CTSGSAVSNSEWFYSRDRGGKLVVSKKTRRDDQFGQVAEGDFGGIAREFVCKQK |
Ga0311372_109167571 | 3300030520 | Palsa | RDRNGKLVVSKKTHRDDQFGQMAEGNFGEIARNFVCTQK |
Ga0311355_105468733 | 3300030580 | Palsa | RVRFNCASGSAMPNSEWLYSRDRNGKLVVSKKTHRDDQFGQMAEGNFGEIARNFVCTQK |
Ga0311355_115667321 | 3300030580 | Palsa | GSAIANSEWFYSRDRGGKLVVSKKALHDDQFGQPAEGNFGDMARDFVCHQR |
Ga0310039_101845123 | 3300030706 | Peatlands Soil | EWFYSRERGGKLVVSKKTHRDDQFGRSAEGGFGEMARDFVCKQK |
Ga0302307_106712451 | 3300031233 | Palsa | VTNSEWFYSRDHSGKLVVSKKTHRDDQFGQASEGDFGGMAREFVCKQK |
Ga0302324_1021205782 | 3300031236 | Palsa | CSSGSEIPNSEWFYSRDHSGKLVVSKKTRRDDQFGQPAEGDFGGIAREFVCKQK |
Ga0302318_100624321 | 3300031258 | Bog | RVRFNCSDNNATQGVVANSEWFYSRDRGGKLMVSKKARRDDQFGQAPEGGFGDLARDFVCKQK |
Ga0302326_112279633 | 3300031525 | Palsa | DRNGKLVVSKKTHRDDQFGQMAEGNFGEIARNFVCTQK |
Ga0310686_1068590061 | 3300031708 | Soil | SVVANSEWFYSRDHGGKLVVSKKAHHDDQFGQTSEGDFGEIARDFVCKQK |
Ga0310686_1085377323 | 3300031708 | Soil | PNSEWFYSRDHGVTLVVSKKTRRDDQFGQMAEGDFGGIAREFVCGQK |
Ga0307478_113502681 | 3300031823 | Hardwood Forest Soil | SRDRSGKLVVSKKARRDDLFGAEAEGGFGTIARDFVCQQK |
Ga0307478_115028462 | 3300031823 | Hardwood Forest Soil | YSRDHSGKLVVSKKTHHDDQFGSVSEGNFGEMARDFVCTQK |
Ga0311301_114616962 | 3300032160 | Peatlands Soil | NCASGSTLPSVVANSEWFYSRDRGGKLVVSKKAHHDDQFGQTAEGDFGEIARDFVCKQK |
Ga0311301_128236011 | 3300032160 | Peatlands Soil | YSRDRGGKLVVSKKTRRDDQFGQVAEGDFGRMAREFVCKQK |
Ga0335072_116844101 | 3300032898 | Soil | YSRARGGKLVVSKKARRDDQFGSTAEGGFRDMARDFVCQQK |
Ga0334850_108231_1_132 | 3300033828 | Soil | WFYARDHSGKLVVTKKTRRDDQFGQASEGNFAGMAKDFVCGQK |
Ga0370515_0152955_820_987 | 3300034163 | Untreated Peat Soil | GSTTPSVVSNSEWFYSRDHGGKLVVSKKAHRDDQFGQTSEGDFGEIAKDFVCKQK |
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