NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F090668

Metagenome / Metatranscriptome Family F090668

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090668
Family Type Metagenome / Metatranscriptome
Number of Sequences 108
Average Sequence Length 49 residues
Representative Sequence ANSEWFYSRDHGGKLVVSKKAHRDDQFGQMAEGDFGEIARDFVCKQK
Number of Associated Samples 93
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 18.52 %
% of genes from short scaffolds (< 2000 bps) 18.52 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (83.333 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(13.889 % of family members)
Environment Ontology (ENVO) Unclassified
(24.074 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.889 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.00%    β-sheet: 16.00%    Coil/Unstructured: 64.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF00132Hexapep 7.41
PF06426SATase_N 3.70
PF01551Peptidase_M23 1.85
PF01564Spermine_synth 1.85
PF08238Sel1 0.93
PF04255DUF433 0.93
PF02878PGM_PMM_I 0.93
PF02769AIRS_C 0.93
PF13906AA_permease_C 0.93
PF16916ZT_dimer 0.93
PF01197Ribosomal_L31 0.93
PF06114Peptidase_M78 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG1045Serine acetyltransferaseAmino acid transport and metabolism [E] 3.70
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 0.93
COG0254Ribosomal protein L31Translation, ribosomal structure and biogenesis [J] 0.93
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 0.93
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A83.33 %
All OrganismsrootAll Organisms16.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001084|JGI12648J13191_1033128All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium513Open in IMG/M
3300002245|JGIcombinedJ26739_101514620All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium566Open in IMG/M
3300004092|Ga0062389_103713377All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium573Open in IMG/M
3300004104|Ga0058891_1328001All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300007788|Ga0099795_10539545All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300009638|Ga0116113_1019712All Organisms → cellular organisms → Bacteria → Acidobacteria1480Open in IMG/M
3300009683|Ga0116224_10643816Not Available507Open in IMG/M
3300014654|Ga0181525_10696512All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300018042|Ga0187871_10178294All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1193Open in IMG/M
3300018086|Ga0187769_11138792All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium590Open in IMG/M
3300021178|Ga0210408_11433466All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M
3300021181|Ga0210388_10450431All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1131Open in IMG/M
3300021401|Ga0210393_11645471All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300022523|Ga0242663_1103431All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300025320|Ga0209171_10608578All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300027824|Ga0209040_10148737All Organisms → cellular organisms → Bacteria1267Open in IMG/M
3300028759|Ga0302224_10448508All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300028882|Ga0302154_10341141Not Available730Open in IMG/M
3300031258|Ga0302318_10062432All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1552Open in IMG/M
3300032160|Ga0311301_12823601All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil13.89%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa11.11%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog9.26%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil7.41%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.41%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil7.41%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.48%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil5.56%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland5.56%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.63%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland3.70%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.85%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.85%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.85%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.93%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.93%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.93%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.93%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001084Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1EnvironmentalOpen in IMG/M
3300001546Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004104Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009638Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023056Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2EnvironmentalOpen in IMG/M
3300025320Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025412Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300028565Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3EnvironmentalOpen in IMG/M
3300028748Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028779Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2EnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028866Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2EnvironmentalOpen in IMG/M
3300028882Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300029917I_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029919Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_2EnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030049Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1EnvironmentalOpen in IMG/M
3300030053Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2EnvironmentalOpen in IMG/M
3300030054Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1EnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300031233Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033828Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12648J13191_103312823300001084Forest SoilSRDHGGTLVVSKKTRRDDQFGQMAEGDFGGIAREFVCKQK*
JGI12659J15293_1010210223300001546Forest SoilSVPSVVANSEWFYSRDHGGKVVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQK*
JGI12635J15846_1067482913300001593Forest SoilHGGTLVVSKKTRRDDQFGQMAEGDFGGIAREFVCKQK*
JGIcombinedJ26739_10004410113300002245Forest SoilGSAVTNSEWFYSRDRNGKLVVSKKMRHDDQFGQAAEGNFGEMAREFVCKQR*
JGIcombinedJ26739_10151462013300002245Forest SoilSSVVANSEWFYSRDHGGKVVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQK*
Ga0062384_10044030523300004082Bog Forest SoilSRDHGGKLVVSKKTRRDDQFGQIAEGDFGSIARDFVCKQ*
Ga0062389_10214263213300004092Bog Forest SoilANSEWFYSRDHGGKLVVSKKAHRDDQFGQMAEGDFGEIARDFVCKQK*
Ga0062389_10371337723300004092Bog Forest SoilSAAPSVATNSEWLYSRDRGGKVVVSKKMRRDDHFGQMSEGGFGDIAKDFVCKQK*
Ga0058891_132800113300004104Forest SoilNSEWFYSRDRSGKLVVSKKARRDDLFGAEAEGGFGTIARDFVCQQK*
Ga0066661_1022888113300005554SoilAEWLYARDRNGKLVVSKKTRRDDEFGQPSEGGFIEMDSKYVCGQSR*
Ga0070762_1022782313300005602SoilSEWFYSRDHGGKVVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQK*
Ga0070762_1109537413300005602SoilRARVRFNCASGSAVPGVAVSSEWFYSREHGKLVVSKKTHRDDQFGQVAEGDFGEIARDFVCKQK*
Ga0070764_1027191613300005712SoilRNGKLVVSKKMRHDDQFGLAAEGNFGEMAREFVCKQR*
Ga0070765_10018010943300006176SoilASIVPNSEWFYSRDRGGKLVVSKKARRDDQFGQLAEGDFGEIARDFVCKQK*
Ga0079219_1158509023300006954Agricultural SoilWFYSRDHGGKIVVSKKAARDSQFGQELEGGFEEMARDYVCKQK*
Ga0099794_1027276313300007265Vadose Zone SoilDRSGKLVVSKKTRRDDEFGQQSEGGFIEIASKYVCGQSR*
Ga0099795_1053954533300007788Vadose Zone SoilVRFNCASGSFLPNSEWLYSRDRSGKLVVSKKTHRDDQFGQVAEGNFGEMAREFVCKQK*
Ga0116225_124233713300009524Peatlands SoilRVRFNCAGGVAVPIAVANSEWFYSRERGGKLVVSKKTHRDDQFGRSAEGGFGEMARDFVCKQK*
Ga0116133_100296213300009623PeatlandWFYSRDHSGKLVVSKKSGRDDQFGQISEGNFREMARDFVCGQK*
Ga0116113_101971233300009638PeatlandRFNCSSGSEVPNSEWFYSRDHGGTLVVSKKARRDDQFGQTAEGDFGGIAREFVCKQK*
Ga0116113_110922223300009638PeatlandRVRFGCGSGSAIPTAEWFYSRDRGGKFVVSKKTHRDDQFGAVAEGGFGGLVSKFVCEQK*
Ga0116106_108761933300009645PeatlandAVSNSEWFYSRDHSGKLVVSKKSRRDDQFGQISEGNFREMARDFVCGQK*
Ga0116224_1064381613300009683Peatlands SoilSVVANSEWFYSRDHGKLVVSKKTHRDDQFGQAAEGDFGEIARDFVCKQK*
Ga0116217_1056130223300009700Peatlands SoilSEWFYSRDRSGKLVVSKKTRRDDQFGQVSEGNFGEMAKDFVCKQK*
Ga0116130_114271913300009762PeatlandLRARVHFNCASGSAVPNSEWFYSRDHSGKLIVSKKTRRDDQFGQVAEGDFGEIARDYVCKQK*
Ga0116219_1002293443300009824Peatlands SoilAVPIAVANSEWFYSRERGGKLVVSKKTHRDDQFGRSAEGGFGEMARDFVCKQK*
Ga0116223_1012590033300009839Peatlands SoilPIAVANSEWFYSRERGGKLVVSKKTHRDDQFGRSAEGGFGEMARDFVCKQK*
Ga0074044_1073228623300010343Bog Forest SoilGSAVPNSMWFYSRDHSGQLVVSKKARHDDQFGEESEGGFGEVAKDFVCKQ*
Ga0074044_1086310823300010343Bog Forest SoilFYSRDRGGKVVVSKKTKRDDQFGKSAEGDFGGMAREFVCKQ*
Ga0074044_1102519113300010343Bog Forest SoilIAVANSEWFYSRERGGKLVVSKKTHRDDQFGRSTEGGFGEIARDFVCKQK*
Ga0137392_1048011633300011269Vadose Zone SoilEWLYARDRSGKLVVSKKTRRDDEFGQQSEGGFIEIASKYVCGQSR*
Ga0137386_1043913413300012351Vadose Zone SoilDRNGKLVVSKKTRRDDEFGQPSEGGFIEMASKYVCGQSR*
Ga0137390_1134022323300012363Vadose Zone SoilCASDAGPGVVANSEWFYSRDRSGKLVVSTKMRHDDQFGQVAEGGFGDMAREFVCKQK*
Ga0137395_1027220633300012917Vadose Zone SoilSGTAVPNAEWFYSRDRGGKLIVSKKTHRDDQFGQEAQGNFGAMVREFVCKQK*
Ga0137395_1121557723300012917Vadose Zone SoilPSAEWLYARDRSGKLVVSKKTRRDDEFGQQSEGGFIEIASKYVCGQSR*
Ga0181523_1026270913300014165BogRARVRFNCGSGNAVTNSEWFYSRDRGGKLVVSKKTRRDDQFGQASEGNFGEMVRDFVCKQK*
Ga0181531_1028971613300014169BogGSAVPNSEWFYSRDHSGKLIVSKKTRRDDQFGQVAEGDFGEIARDYVCKQK*
Ga0182018_1052026923300014489PalsaSEWFYSRDHGGKLVVSKKTRRDDQFGQTAEGDFGGIAREFVCGQK*
Ga0182015_1013493513300014495PalsaRNGKLVVSKKLRHGDQFGQAAEGNFGEMAREFVCKQR*
Ga0182024_1292144023300014501PermafrostFYSRDHSGKLVVSKKSRRDDQFGQISEGNFREIARDFVCGQK*
Ga0181525_1007502513300014654BogKLVVSKKARRDDQFGQVAEGDFGEIARDFVCKQK*
Ga0181525_1069651223300014654BogYSRDHGGTLVVSKKARRDDQFGQTAEGDFGGIAREFVCAQK*
Ga0181516_1017979233300014655BogSRDHGGQLVVSKKLRRDDQFGQAAEGGFGAMARNYVCGAK*
Ga0187879_1053499623300017946PeatlandVAVNSEWFYSRDHGKLVVSKKTHRDDQFGQVAEGDFGAIARDFVCKQK
Ga0187863_1054932123300018034PeatlandWFYSRDHGGQLVVSKKTRRDDQFGQMAEGDFGAMAREFVCKQK
Ga0187855_1044933423300018038PeatlandVNSEWFYSRDHGKLVVSKKTHRDDQFGQVAEGDFGAIARDFVCKQK
Ga0187871_1017829413300018042PeatlandVELRARVRFDCSGGSTAAGVVTTSEWFYSRDRSGKLVVSKKARRDDQFGQLSEGGFGNLARGFVCKQ
Ga0187769_1113879213300018086Tropical PeatlandVANWEWFYSRDRSGKLVVSKKTRRDDQFGQLAEGGFGDLAKDFVCKQK
Ga0187800_157640733300019278PeatlandPEWFYSRDRSGKLVVSKKTRRDDQFGQVAEGGFGDMAKDFVCSQK
Ga0182025_110457423300019786PermafrostRFNCVSGSATPNSEWFYSADHSGKLVVSKKTRHDDQFGQLSEGNFGEMAKDFVCKQK
Ga0210403_1059737913300020580SoilMPNSEWFYSRDRSGKLVVSKKARRDDLFGAEAEGGFGTIARDFVCQQK
Ga0210400_1031898213300021170SoilVSGSATTNSEWFYSADHSGRLVVSKKARRDDQFGQVAEGNFGELAKDFVCKQK
Ga0210408_1095117613300021178SoilNCASSSAVPGVVANSEWFYSRDHGGKLVVSKKTRHDDQFGQVAEGDFGEMAREFVCKQK
Ga0210408_1143346613300021178SoilAPTALWFYSRDRGGKIVVSKKAAHDDQFGRETEGGFGEMVRTYVCAQK
Ga0210396_1017501443300021180SoilYNCASGSAMPNSEWFYSRDRSGKLVVSKKARRDDLFGAEAEGGFGTIARDFVCQQK
Ga0210388_1045043133300021181SoilVELRARVRFDCASRTAVPNSEWFYSRDHGGKLVVSKKSRRDDQFGSTTEGGFGDIARDFVCKQK
Ga0210393_1164547123300021401SoilSEWFYSREHGKLVVSKKTHRDDQFGQVAEGDFGEIARDFVCKQK
Ga0210385_1062223523300021402SoilSEWFYSRDHGGKLVVSKKTRRDDQFGQTAEGDFGGIAREFVCGQK
Ga0210387_1132620713300021405SoilSAVPSVVANSEWFYSRDHGGKLVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQK
Ga0210391_1063415013300021433SoilRFNCASGSSVPSVVANSEWFYSRDHGGKVVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQ
Ga0210390_1040656833300021474SoilVPSVVANSEWFYSRDHGGKVVVSKKAHRDDQFGQVAEGDFGEIARDFVCKQK
Ga0210392_1028063533300021475SoilGRLVVSKKARRDDQFGQVAEGNFGELAKDFVCKQK
Ga0210409_1074562013300021559SoilRVRFNCASGSAVPNSEWFYSRDRSGKLVVSKKTRRDDQFGQVTEGDFGGIAKEFVCKQK
Ga0242663_110343123300022523SoilFNCASGSTTPSVVANSEWFYSRDHGGKLVVSKKAHRDDQFGQTSEGDFGEIAKDFVCKQK
Ga0233357_104606713300023056SoilFYSRDHSGKLVVSKKMRHDDQFGQVAEGGFGDMAREFVCKQK
Ga0209171_1060857823300025320Iron-Sulfur Acid SpringRARVHFNCASGSAVTNSEWFYSRDRNGKLVVSKKMRHDDQFGQAAEGNFGEMAREFVCKQ
Ga0208194_104872813300025412PeatlandWFYSRDHSGKLVVSKKSGRDDQFGQISEGNFREMARDFVCGQK
Ga0209524_111899013300027521Forest SoilYSRDRSGKLVVSKKTRRDDEFGKQSEGGFIEIASKYVCGQSR
Ga0209221_100522913300027609Forest SoilRVRFNCASGSAVSNSEWFYSRDHSGKLVVSKKTRHDDQFGEEAEGNFGELARDFVCKQK
Ga0209447_1014459613300027701Bog Forest SoilRFNCASDGIAGVAVNSEWFYSRDHGKLVVSKKTRRDDQFGQIAEGDFGEIARDFVCKQK
Ga0209655_1024198123300027767Bog Forest SoilRVRFNCASGSAVPNSEWFYSRDHSGKLVVSKKARRDDEFGQVAEGNFGELTREFVCKQK
Ga0209040_1014873713300027824Bog Forest SoilRARVRFNCASGSAVPGVVTTSEWFYSRDHSGKLVVSKKARHDDQFGQVSEGGFGDLAREFVCKQ
Ga0209274_1046468513300027853SoilGKLVVSKKAHRDDQFGQTSEGDFGEIAKDFVCKQK
Ga0302145_1012499423300028565BogRGGKLMVSKKARRDDQFGQAPEGGFGDMARDFVCKQK
Ga0302156_1003520043300028748BogVRFNCASGSAAPSAVSNSEWFYSRDRSGKLVVSKKIHRDDQFGQVAEGDFGEIAREFVCKQK
Ga0302224_1044850813300028759PalsaTSGSAVSNSEWFYSRDRGGKLVVSKKTRRDDQFGQVAEGDFGGIAREFVCKQK
Ga0302266_1034538513300028779BogFYSRDRSGKLVVSKKTHRDDQFGQVAEGDFGEIAREFVCKQK
Ga0302225_1019844423300028780PalsaEWFYSRDRGGKLVVSKKTRRDDQFGQVAEGDFGGIAREFVCKQK
Ga0302278_1008872013300028866BogSRDRGGKLMVSKKARRDDQFGQAPEGGFGDMARDFVCKQK
Ga0302154_1034114123300028882BogYSRDHGGTLVVSKKARRDDQFGQTAEGDFGGIAREFVCKQK
Ga0308309_1024534313300028906SoilARVRFNCVSGSAVPNSEWFYSRDRGGKLVVSKKTRRDDQFGQTAEGDFGGIAREFVCGQK
Ga0308309_1079268613300028906SoilHGKLVVSKKTHRDDQFGQVEEGDFGEMARDFVCKQK
Ga0308309_1106892313300028906SoilFNCSGGAEATGVASIVPNSEWFYSRDRGGKLVVSKKARRDDQFGQLAEGDFGEIARDFVCKQK
Ga0311369_1048995323300029910PalsaMPNSEWLYSRDRNGKLVVSKKTHRDDQFGQMAEGNFGEIARNFVCTQK
Ga0311326_1032653423300029917BogSGSAAPSAVSNSEWFYSRDRSGKLVVSKKIHRDDQFGQVAEGDFGEIAREFVCKQK
Ga0302141_110683023300029919BogSAVSNSEWFYSRDRSGKLVVSKKIHRDDQFGQVAEGDFGEIAREFVCKQK
Ga0311330_1104099023300029945BogGVPTAVSNSEWFYSRDRSGKLVVSKKTHRDDQFGQVAEGDFGEIAREFVCKQK
Ga0311371_1194595723300029951PalsaARVRFNCTSGSAVPNSEWFYSRDRGGKLVVSKKSRRDDQFGQTAEGDFGGIAREFVCGQK
Ga0302191_1027573523300030049BogEWFYSRDRGGKLMVSKKARRDDQFGQAPEGGFGDMARDFVCKQK
Ga0302177_1016619213300030053PalsaLRARVRFNCASGSAMPNSEWLYSRDRNGKLVVSKKTHRDDQFGQMAEGNFGEIARNFVCTQK
Ga0302182_1009016813300030054PalsaCTSGSAVSNSEWFYSRDRGGKLVVSKKTRRDDQFGQVAEGDFGGIAREFVCKQK
Ga0311372_1091675713300030520PalsaRDRNGKLVVSKKTHRDDQFGQMAEGNFGEIARNFVCTQK
Ga0311355_1054687333300030580PalsaRVRFNCASGSAMPNSEWLYSRDRNGKLVVSKKTHRDDQFGQMAEGNFGEIARNFVCTQK
Ga0311355_1156673213300030580PalsaGSAIANSEWFYSRDRGGKLVVSKKALHDDQFGQPAEGNFGDMARDFVCHQR
Ga0310039_1018451233300030706Peatlands SoilEWFYSRERGGKLVVSKKTHRDDQFGRSAEGGFGEMARDFVCKQK
Ga0302307_1067124513300031233PalsaVTNSEWFYSRDHSGKLVVSKKTHRDDQFGQASEGDFGGMAREFVCKQK
Ga0302324_10212057823300031236PalsaCSSGSEIPNSEWFYSRDHSGKLVVSKKTRRDDQFGQPAEGDFGGIAREFVCKQK
Ga0302318_1006243213300031258BogRVRFNCSDNNATQGVVANSEWFYSRDRGGKLMVSKKARRDDQFGQAPEGGFGDLARDFVCKQK
Ga0302326_1122796333300031525PalsaDRNGKLVVSKKTHRDDQFGQMAEGNFGEIARNFVCTQK
Ga0310686_10685900613300031708SoilSVVANSEWFYSRDHGGKLVVSKKAHHDDQFGQTSEGDFGEIARDFVCKQK
Ga0310686_10853773233300031708SoilPNSEWFYSRDHGVTLVVSKKTRRDDQFGQMAEGDFGGIAREFVCGQK
Ga0307478_1135026813300031823Hardwood Forest SoilSRDRSGKLVVSKKARRDDLFGAEAEGGFGTIARDFVCQQK
Ga0307478_1150284623300031823Hardwood Forest SoilYSRDHSGKLVVSKKTHHDDQFGSVSEGNFGEMARDFVCTQK
Ga0311301_1146169623300032160Peatlands SoilNCASGSTLPSVVANSEWFYSRDRGGKLVVSKKAHHDDQFGQTAEGDFGEIARDFVCKQK
Ga0311301_1282360113300032160Peatlands SoilYSRDRGGKLVVSKKTRRDDQFGQVAEGDFGRMAREFVCKQK
Ga0335072_1168441013300032898SoilYSRARGGKLVVSKKARRDDQFGSTAEGGFRDMARDFVCQQK
Ga0334850_108231_1_1323300033828SoilWFYARDHSGKLVVTKKTRRDDQFGQASEGNFAGMAKDFVCGQK
Ga0370515_0152955_820_9873300034163Untreated Peat SoilGSTTPSVVSNSEWFYSRDHGGKLVVSKKAHRDDQFGQTSEGDFGEIAKDFVCKQK


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