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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F090665 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 108 |
| Average Sequence Length | 69 residues |
| Representative Sequence | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDPDKTTQN |
| Number of Associated Samples | 84 |
| Number of Associated Scaffolds | 108 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 82.41 % |
| % of genes near scaffold ends (potentially truncated) | 22.22 % |
| % of genes from short scaffolds (< 2000 bps) | 78.70 % |
| Associated GOLD sequencing projects | 81 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.59 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (78.704 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (12.037 % of family members) |
| Environment Ontology (ENVO) | Unclassified (18.519 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (51.852 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 3.16% β-sheet: 28.42% Coil/Unstructured: 68.42% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.59 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 108 Family Scaffolds |
|---|---|---|
| PF12680 | SnoaL_2 | 10.19 |
| PF13400 | Tad | 2.78 |
| PF05491 | RuvB_C | 1.85 |
| PF13185 | GAF_2 | 0.93 |
| PF00689 | Cation_ATPase_C | 0.93 |
| PF03699 | UPF0182 | 0.93 |
| PF02643 | DUF192 | 0.93 |
| PF07883 | Cupin_2 | 0.93 |
| PF02518 | HATPase_c | 0.93 |
| PF02357 | NusG | 0.93 |
| PF14023 | DUF4239 | 0.93 |
| PF13884 | Peptidase_S74 | 0.93 |
| PF12728 | HTH_17 | 0.93 |
| PF05496 | RuvB_N | 0.93 |
| PF15780 | ASH | 0.93 |
| PF01656 | CbiA | 0.93 |
| PF03060 | NMO | 0.93 |
| PF09721 | Exosortase_EpsH | 0.93 |
| PF07811 | TadE | 0.93 |
| PF01121 | CoaE | 0.93 |
| PF13720 | Acetyltransf_11 | 0.93 |
| COG ID | Name | Functional Category | % Frequency in 108 Family Scaffolds |
|---|---|---|---|
| COG2255 | Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB | Replication, recombination and repair [L] | 2.78 |
| COG0237 | Dephospho-CoA kinase | Coenzyme transport and metabolism [H] | 0.93 |
| COG0250 | Transcription termination/antitermination protein NusG | Transcription [K] | 0.93 |
| COG0474 | Magnesium-transporting ATPase (P-type) | Inorganic ion transport and metabolism [P] | 0.93 |
| COG0516 | IMP dehydrogenase/GMP reductase | Nucleotide transport and metabolism [F] | 0.93 |
| COG1430 | Uncharacterized conserved membrane protein, UPF0127 family | Function unknown [S] | 0.93 |
| COG1615 | Uncharacterized membrane protein, UPF0182 family | Function unknown [S] | 0.93 |
| COG2070 | NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family | General function prediction only [R] | 0.93 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 78.70 % |
| All Organisms | root | All Organisms | 21.30 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 12.04% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 8.33% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 8.33% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 7.41% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 7.41% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 6.48% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 5.56% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 4.63% |
| Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 4.63% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 3.70% |
| Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 3.70% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.78% |
| Palsa | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa | 2.78% |
| Iron-Sulfur Acid Spring | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring | 1.85% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.85% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 1.85% |
| Bog Forest Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil | 1.85% |
| Soil | Environmental → Terrestrial → Soil → Clay → Unclassified → Soil | 1.85% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.85% |
| Peatland | Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland | 0.93% |
| Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 0.93% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.93% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.93% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.93% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.93% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.93% |
| Palsa | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa | 0.93% |
| Permafrost | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost | 0.93% |
| Plant Litter | Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter | 0.93% |
| Biofilm | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm | 0.93% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.93% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300001593 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 | Environmental | Open in IMG/M |
| 3300004006 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 | Environmental | Open in IMG/M |
| 3300004082 | Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3 | Environmental | Open in IMG/M |
| 3300004631 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005529 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1 | Environmental | Open in IMG/M |
| 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
| 3300005591 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 | Environmental | Open in IMG/M |
| 3300005607 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 | Environmental | Open in IMG/M |
| 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Environmental | Open in IMG/M |
| 3300006176 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 | Environmental | Open in IMG/M |
| 3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
| 3300006893 | Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG | Environmental | Open in IMG/M |
| 3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
| 3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
| 3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
| 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009683 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG | Environmental | Open in IMG/M |
| 3300009700 | Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG | Environmental | Open in IMG/M |
| 3300010048 | Tropical forest soil microbial communities from Panama - MetaG Plot_11 | Environmental | Open in IMG/M |
| 3300010343 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
| 3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
| 3300014489 | Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG | Environmental | Open in IMG/M |
| 3300014501 | Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300017823 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3 | Environmental | Open in IMG/M |
| 3300017927 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4 | Environmental | Open in IMG/M |
| 3300017943 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4 | Environmental | Open in IMG/M |
| 3300017955 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2 | Environmental | Open in IMG/M |
| 3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
| 3300017961 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG | Environmental | Open in IMG/M |
| 3300017966 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG | Environmental | Open in IMG/M |
| 3300017994 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2 | Environmental | Open in IMG/M |
| 3300018001 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5 | Environmental | Open in IMG/M |
| 3300018047 | Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10 | Environmental | Open in IMG/M |
| 3300018085 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
| 3300018088 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
| 3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
| 3300021476 | Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2) | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300022724 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027370 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027651 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027660 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027706 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027727 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027826 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027853 | Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027905 | Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes) | Environmental | Open in IMG/M |
| 3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
| 3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300028906 | Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2) | Environmental | Open in IMG/M |
| 3300029999 | I_Palsa_E3 coassembly | Environmental | Open in IMG/M |
| 3300030007 | I_Palsa_E1 coassembly | Environmental | Open in IMG/M |
| 3300031236 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1 | Environmental | Open in IMG/M |
| 3300031670 | Soil microbial communities from Risofladan, Vaasa, Finland - OX-3 | Environmental | Open in IMG/M |
| 3300031708 | FICUS49499 Metagenome Czech Republic combined assembly | Environmental | Open in IMG/M |
| 3300031715 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05 | Environmental | Open in IMG/M |
| 3300031716 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3 | Environmental | Open in IMG/M |
| 3300031718 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 | Environmental | Open in IMG/M |
| 3300031724 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20 | Environmental | Open in IMG/M |
| 3300031890 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2) | Environmental | Open in IMG/M |
| 3300031896 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19 | Environmental | Open in IMG/M |
| 3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
| 3300032028 | Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA5 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300032055 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23 | Environmental | Open in IMG/M |
| 3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
| 3300032515 | FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data) | Environmental | Open in IMG/M |
| 3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
| 3300032805 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2 | Environmental | Open in IMG/M |
| 3300032828 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4 | Environmental | Open in IMG/M |
| 3300032955 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5 | Environmental | Open in IMG/M |
| 3300033480 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| JGI12635J15846_100839367 | 3300001593 | Forest Soil | MGKSAAIRLLPGTIVVFRARRHQVVSAKSGAQSEAPFFRLRALDDGAMTGLISHRVIEREPEEPDKADETTQD* |
| Ga0055453_102361981 | 3300004006 | Natural And Restored Wetlands | MDKSTAIRLLPGSVVIFRGRRHQVMSAKSGAQGEAPFFRLRALDDGALTGLISHRM |
| Ga0062384_1002043851 | 3300004082 | Bog Forest Soil | MDKTAAIRLLPGTAVLFRGRRHSIMSVKSGLQGEAPFFRLRDLDDGGVTGLISHRMVEAAPERPAMEKPAQN* |
| Ga0058899_118354912 | 3300004631 | Forest Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEADPDKTTQN* |
| Ga0066676_109999321 | 3300005186 | Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDPDKTTAQN* |
| Ga0070708_1004935651 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MDKSTAIRVLPGSVVMFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDPDKTTAQN* |
| Ga0070741_100713682 | 3300005529 | Surface Soil | MDKTTAIRLLPGTAVLFRGRRYSVISVKGGQQSEAPFFRLRDDDDRTVTGLISHQMIEPAPETTGIEKSAVSQ* |
| Ga0070741_102910952 | 3300005529 | Surface Soil | VSDAEEVQIMDRSTAIRLLPGSVVIFRGRRHQVMSAKAGAGSEAPFFRLRDLDDGAMTGLISHRMVEPDPEVSKQN* |
| Ga0070697_1006428311 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | MDKSTAIRLIPVSPVMFRGHRHLILSAKSGLEKDAPFFRLRNLDDGGVTGLISHRMIEPAPEDSAMKG* |
| Ga0070761_106272352 | 3300005591 | Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPEPDMT |
| Ga0070740_1000238628 | 3300005607 | Surface Soil | MDRSTAIRLLPGSVVIFRGRRHQVMSAKAGAGSEAPFFRLRDLDDGAMTGLISHRMVEPDPEVSKQN* |
| Ga0070717_102595854 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MDKSTAIRVLPGSVVMFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEHDPDKTTAQN* |
| Ga0070765_1002225964 | 3300006176 | Soil | VDKSTAIRLLPGSVVVFRGRRHQVMSAKSGAQSEAPFFRLRALDDGALTGLISHRMVETDTDGNAAQN* |
| Ga0079221_101752142 | 3300006804 | Agricultural Soil | MDKSAAIRVLPGSVVIFRGRRHQVMSAKVGAQSEAPFFRLRALDDGALTGLISHRMVEPDPERTAQN* |
| Ga0073928_1000069418 | 3300006893 | Iron-Sulfur Acid Spring | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDPDKTTQN* |
| Ga0073928_106066942 | 3300006893 | Iron-Sulfur Acid Spring | MDKSTAIRLLPGTVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDAAKPSQN* |
| Ga0099830_110338741 | 3300009088 | Vadose Zone Soil | MDKSTAIRLLPGSVVVFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDVEKTAQN* |
| Ga0099830_115972901 | 3300009088 | Vadose Zone Soil | MDKSTAIRLIPGSAVMFRGRRHSIISAKTGLQSEAPFFRLRNLVDGGITGLVSHRMLEPIPGESAMKSSAQK* |
| Ga0099828_113469251 | 3300009089 | Vadose Zone Soil | MDKSTAIRLLPGSVVVFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDVEK |
| Ga0099792_106601082 | 3300009143 | Vadose Zone Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDPDKITAQN* |
| Ga0105238_123575891 | 3300009551 | Corn Rhizosphere | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQGEAPFFRLRALDDGALTGLISHRMVEPDADNTTQN* |
| Ga0116224_103555262 | 3300009683 | Peatlands Soil | MDKSAAIELLPGTPVLFRGRLYSVTSVKSGVQSEAPFFRLRDLDNGAVTSLISYTMLEAAPEESAMEKP* |
| Ga0116217_105410921 | 3300009700 | Peatlands Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHIMVEPDTDKTTAQN* |
| Ga0126373_125303241 | 3300010048 | Tropical Forest Soil | MDRSTAIRLLPGSVVIFRGRRHQVMSAKAGAGSEAPFFRLRALDDGAMTGLISHRMVEPEPEVSKQN* |
| Ga0074044_101256471 | 3300010343 | Bog Forest Soil | MDKSKAIRLLPGTAVLFRGRRHSVMSVKSGLQSDAPFFRLRDLDDGALTGLISHRVLEAAPEAHPLEQPAQD* |
| Ga0074044_105333401 | 3300010343 | Bog Forest Soil | MDKSAAIRLMPGTAVLFRGRRHSIVNAKTGMQTEAPFFRLRNLDDGGVTGLISHKMLEPVPEESAMEG* |
| Ga0126381_1051363212 | 3300010376 | Tropical Forest Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPAEEETQH* |
| Ga0134126_106157842 | 3300010396 | Terrestrial Soil | MDKSAAIRVLPGSVVVFRGRRHQVMSAKAGVQSEAPFFRLRALDDGALTGLISHRMVEPDDPKTAQN* |
| Ga0134126_111359851 | 3300010396 | Terrestrial Soil | SVVVFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDADVTTQN* |
| Ga0150983_156043032 | 3300011120 | Forest Soil | MDKSIAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEADPDVTTQN* |
| Ga0137388_108261991 | 3300012189 | Vadose Zone Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEHDPDKTTQN* |
| Ga0137390_108176841 | 3300012363 | Vadose Zone Soil | MDKSAAIRLLPGSVVVFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDVEKTAQN* |
| Ga0137397_105879802 | 3300012685 | Vadose Zone Soil | LPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDPDKTTAQN* |
| Ga0182018_102140482 | 3300014489 | Palsa | MGKSAAIRLLPGTIVVFRGRRHQVVSAKSGAQSEAPFFRLRALDDGAMTGLISHRVIEREPEEPDKADETTQD* |
| Ga0182024_102301845 | 3300014501 | Permafrost | MDKSAAIRLLPGTIVVFRGRRHQVVSAKSGAQSEAPFFRLRALDDGAMTGLVSHRVIEREPEEPDKADETTQD* |
| Ga0137403_111820092 | 3300015264 | Vadose Zone Soil | MDKSIAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMV |
| Ga0187818_101219952 | 3300017823 | Freshwater Sediment | MDKSTAIRILPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDPDKTTQN |
| Ga0187824_103502622 | 3300017927 | Freshwater Sediment | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQGEAPFFRLRALDDGALTGLISHRMVEPDADNTTQN |
| Ga0187819_103206871 | 3300017943 | Freshwater Sediment | MDKSTAIRLIPGSPVTFRGRRHSIISAKSGLESDAPFFRLRNLDDGGVTGLISYRMIEAAPEDSATEG |
| Ga0187819_106034472 | 3300017943 | Freshwater Sediment | MDKSKAIRLIPGSQVTFRGRRHSVMSAKSGLASDAPFFRLRNLDDGGVTGLISYRMIESAPEDSAMKSEQPG |
| Ga0187817_100733154 | 3300017955 | Freshwater Sediment | MDKSTAIRLIPGSPVRFRGRRHSVISAGSGLQIDAPFFRLRDLDDGWVVTGLVSYKLLELMPEESTMKAEEPGLEEPGL |
| Ga0187817_101609822 | 3300017955 | Freshwater Sediment | MDKSAAIRLIPGSPVTFRGRSYSIMSVKSGLESDAPFFRLRDLDDGAVTGLISHRMLEAVPEKSGTEKPEQEADAKDYASQRLMAGH |
| Ga0187817_102018642 | 3300017955 | Freshwater Sediment | MDKSAAIELLPGTPVLFRGRLYSVTSVKSGVQSEAPFFRLRDLDNGAVTGLISYTMLEAAPEESAIEKP |
| Ga0187817_104387651 | 3300017955 | Freshwater Sediment | MDKSKAIRLLPGTAVLFRGRRHSVMSVKSGLQSDAPFFRLRDLDDGALTGLISHKVLEAAPEAHPLEQPAQD |
| Ga0187817_109762741 | 3300017955 | Freshwater Sediment | MDKSTAIRLIPGSPVMFRGHRHLILSAKSGLESDAPFFRLRNLDDGGVTGLISYRMIEAAPEDSATKG |
| Ga0187779_100266071 | 3300017959 | Tropical Peatland | VDKSTAIRLLPGSDVLFRGRRHSVMSVKSGQQNEAPFFRLRASDDGAITGLISHRMVEPVPAESDLETVVGG |
| Ga0187779_100451113 | 3300017959 | Tropical Peatland | MDKSTAIRLVPGSAVLFRGHRHSVMSIKSGQQGEAPFFRLRALDDGTVTGLISHRLIERATEESGREQSAQS |
| Ga0187779_100963142 | 3300017959 | Tropical Peatland | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPAEEEMQH |
| Ga0187778_101328233 | 3300017961 | Tropical Peatland | DKSTAIRLLPGSDVLFRGRRHSVMSVKSGQQNEAPFFRLRASDDGAITGLISHRMVEPVPAESDLETVVGG |
| Ga0187776_107231542 | 3300017966 | Tropical Peatland | MDKSAAIRLLPGSAVLFRGRRHSVTSVKSGQQSEAPFFRLRALDDGSVTGLISHRMVEPAQEESETENPTHH |
| Ga0187822_104046981 | 3300017994 | Freshwater Sediment | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDPDKTTQN |
| Ga0187815_100256402 | 3300018001 | Freshwater Sediment | MDKSTAIRVLPGSVVLFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDTDKTAQN |
| Ga0187815_100327132 | 3300018001 | Freshwater Sediment | MDKSTAIRLIPGSPVRFRGRRHSVISAWSGLQIDAPFFRLRDLDDGWVVTSLVSYKLLELMPEESTMKAEGPGLEEPGLDDLQER |
| Ga0187815_102104281 | 3300018001 | Freshwater Sediment | MDRSTAIRLLPGTAVLFRGRRHSVMSVRSGLEGDAPFFRLRNLDDGGVTGLISHKVLESAPEKLSMENPAQEADPKDDAPHRLAATH |
| Ga0187859_103304282 | 3300018047 | Peatland | MDKSAAIRVLPGTIVAFRGRRHEVISTKGGAESEAPYFRLRATDDGAMTGLISHRLVEPEPDKTPRD |
| Ga0187772_100402965 | 3300018085 | Tropical Peatland | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRAPDDGALTGLISHRMVEPAEEEMQH |
| Ga0187772_105118602 | 3300018085 | Tropical Peatland | DVLFRGRRHSVMSVKSGQQNEAPFFRLRASDDGAITGLISHRMVEPVPAESDLETVVRG |
| Ga0187771_102304114 | 3300018088 | Tropical Peatland | MDKSTAIRLLPGSAVLFRGRRHSVTSVKGGQQSEAPFFRLRALDDGSVTGLISHRMVELAPEDSRVEKMAQN |
| Ga0210401_100606683 | 3300020583 | Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEADPDKTTQN |
| Ga0210408_108755191 | 3300021178 | Soil | MDKSTAIRLLPGSVVVFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDVEKTAQN |
| Ga0210394_115158271 | 3300021420 | Soil | GSSMDKTAAIRLLPGTAVLFRGRRHSIMSVKSGLQGEAPFFRLRDLDDGGVTGLISHRMVEAAPERPAMEKPAQN |
| Ga0187846_100129802 | 3300021476 | Biofilm | VDKSAAIRLIPGSVVVFRGRRHQVISAKGGAQSEAPFFRLRDLGDGALTGLISHRMVEAAPEKTLEN |
| Ga0126371_102327052 | 3300021560 | Tropical Forest Soil | MDRSTAIRLLPGSVVIFRGRRHQVMSAKAGAGSEAPFFRLRALDDGAMTGLISHRMVEPEPEVSKQN |
| Ga0126371_119106251 | 3300021560 | Tropical Forest Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPAEEETQH |
| Ga0224712_100953331 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | MDKSAAIRVLPGSVVVFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDADVTTQN |
| Ga0242665_100606122 | 3300022724 | Soil | RPAAGIVGLMRRRSGMDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEADPDKTTQN |
| Ga0207667_110704221 | 3300025949 | Corn Rhizosphere | DKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQGEAPFFRLRALDDGALTGLISHRMVEPDADNTTQN |
| Ga0207702_102470875 | 3300026078 | Corn Rhizosphere | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQGEAPFFRLRALDDGALTGLISHRMVEP |
| Ga0209010_10878262 | 3300027370 | Forest Soil | MGKSAAIRLLPGTIVVFRARRHQVVSAKSGAQSEAPFFRLRALDDGAMTGLISHRVIEREPEEPDKADETTQD |
| Ga0209217_10554271 | 3300027651 | Forest Soil | MDKSTAIRLLPGTVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDAEKATQN |
| Ga0209736_11148551 | 3300027660 | Forest Soil | MDKSTAIRLLPGTVVIFRGRRHQVMSARAGAQSEAPFFRLRALDDGALTGLISHRMVEPDADNTAQN |
| Ga0209581_10546331 | 3300027706 | Surface Soil | VSDAEEVQIMDRSTAIRLLPGSVVIFRGRRHQVMSAKAGAGSEAPFFRLRDLDDGAMTGLISHRMVEPDPEVSKQN |
| Ga0209328_100606182 | 3300027727 | Forest Soil | MDKSTAIRLLPGTVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDAEKTTQN |
| Ga0209060_1000022072 | 3300027826 | Surface Soil | MDKTTAIRLLPGTAVLFRGRRYSVISVKGGQQSEAPFFRLRDDDDRTVTGLISHQMIEPAPETTGIEKSAVSQ |
| Ga0209274_106470121 | 3300027853 | Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPEPDMTTQN |
| Ga0209415_100218944 | 3300027905 | Peatlands Soil | MDKSAAIELLPGTPVLFRGRLYSVTSVKSGVQSEAPFFRLRDLDNGAVTSLISYTMLEAAPEESAMEKP |
| Ga0209415_101388256 | 3300027905 | Peatlands Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHIMVEPDTDKTTAQN |
| Ga0209526_100463436 | 3300028047 | Forest Soil | MDKSTAIRLIPGSAVMFRGRRHSIISAKTGFQSEAPFFRLRDPDGLVTGLVSHRMLELAPEESAV |
| Ga0209526_105687032 | 3300028047 | Forest Soil | MDKSMAIRLIPGSAVMFRGRRHSIISAKTGLQSEAPFFRLRNLDDGGITGLVSHRMLEPIPEESAMKTPAR |
| Ga0137415_111453321 | 3300028536 | Vadose Zone Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSESPFFRLRALDDGALTGLISHRMVEPDPDKTTQN |
| Ga0308309_103906291 | 3300028906 | Soil | VDKSTAIRLLPGSVVVFRGRRHQVMSAKSGAQSEAPFFRLRALDDGALTGLISHRMVETDTDGNAAQN |
| Ga0311339_106035082 | 3300029999 | Palsa | MDKTVAIRVLPGTIVAFRGRRHEVISTKGGAESEAPYFRLRATDDGAMTGLISHRLVEPEPDKTPRD |
| Ga0311338_110541692 | 3300030007 | Palsa | IRVLPGTIVAFRGRRHEVISTKGGAESEAPYFRLRATDDGAMTGLISHRLVEPEPDKTPR |
| Ga0302324_1033196192 | 3300031236 | Palsa | EMDKTVAIRVLPGTIVAFRGRRHEVISTKGGAESEAPYFRLRATDDGAMTGLISHRLVEPEPDKTPRD |
| Ga0307374_100525072 | 3300031670 | Soil | MDKSTAIRLLPGSVVVFRGRRHQVMSAKTGAQSEAPFFRLRALDDGAMTGLISHRMVETVADQASQN |
| Ga0307374_105728171 | 3300031670 | Soil | MDKSAAIRLLPGSVVVFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPDPEKTAQT |
| Ga0310686_1086189771 | 3300031708 | Soil | MDKSAAIRLLPGTIVVFRGRRHQVVSAKSGAESEAPFFRLRALDDGAMTGLISHRFVEQEPEPHKTTQD |
| Ga0310686_1094426711 | 3300031708 | Soil | MDRSTAIRLLPGTAVLFRGRRHSIMSVKSGLQGEAPFFRLRNVDDGGVTGLISHRMVEAAPERPAMEKPAQN |
| Ga0310686_1165772602 | 3300031708 | Soil | MDKTAAIRLLPGTAVLFRGRRHSIISVKSGLQGEAPFFRLRDLDDGGVTGLISHRMVEAAPERPAMEKPAQN |
| Ga0310686_1169591941 | 3300031708 | Soil | MDKSKAIRLLPGTAVLFRGRRHSVMSVKSGLQSDAPFFRLRDLDDGALTGLISHRVLEAAPEAHRIEQPAQD |
| Ga0310686_1187019086 | 3300031708 | Soil | MDKTAAIRLLPGTAVLFRGRRHSIMSVKSGLQGEAPFFRLRDLDDGGVTGLISHKMLEAAPEHTATEKPAQN |
| Ga0307476_102421823 | 3300031715 | Hardwood Forest Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGIISHRMVEPEPDMTTQN |
| Ga0310813_113999452 | 3300031716 | Soil | GSVVIFRGRRHQVMCAKAGAQGEAPFFRLRALDDGALTGLISHRMVEPDADNTTQN |
| Ga0307474_103903953 | 3300031718 | Hardwood Forest Soil | CATCVTHMDKSAAIRLMPGTAVLFRGRRHSIVNAKTGMQSEAPFFRLRNLDDGGVTGLISYKMLEPVPEGCAA |
| Ga0318500_105433161 | 3300031724 | Soil | MDKSAAIRLLPGSAVVFRGRRHSVTSVKSGQQSEAPFFRLRALDDGSVTGLISHRMVEPAQEESETENPTHH |
| Ga0306925_107287013 | 3300031890 | Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEQ |
| Ga0318551_108989881 | 3300031896 | Soil | LGPVEGYAGPCGGPVMDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEQAEEEKQH |
| Ga0318520_101074692 | 3300031897 | Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEQAEEEKQH |
| Ga0316052_1017842 | 3300032028 | Soil | MDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPEPEMTTQN |
| Ga0318575_105299001 | 3300032055 | Soil | GPVMDKSTAIRVLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEQAEEEKQH |
| Ga0311301_100280609 | 3300032160 | Peatlands Soil | MDKSKAIRLLPGTAVLFRGRRHSVMSVKSGLQSDAPFFRLRDLDDGALTGLISHRVLEAAPEAHPLEQPAQD |
| Ga0348332_109948232 | 3300032515 | Plant Litter | MDKTAAIRLLPGTAVLFRGRRHSIMSVKSGLQGEAPFFRLRDLDDGGVTGLISHRMVEAAPERPAMEKPAQN |
| Ga0335085_100229676 | 3300032770 | Soil | MDKSTAIRLLPGSAVLFRGRRHSVTSVKSGQQSEAPFFRLRALDDGSVTGLISHRMVETAPEEFGVEKPAQN |
| Ga0335085_102290373 | 3300032770 | Soil | MDKSTAIRMLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPAEEEKQH |
| Ga0335078_100662706 | 3300032805 | Soil | MDKSTAIRLLPGSAVLFRGRRHSVTSVKSGQQSEAPFFRLRALDDGSVTGLISHRMVERAPEEFGVEKPAQN |
| Ga0335080_107375832 | 3300032828 | Soil | SVRAEEGPIMDKSTAIRMLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPAEEEKQH |
| Ga0335076_112824841 | 3300032955 | Soil | RGDLSVRAEEGPIMDKSTAIRMLPGSVVIFRGRRHQVMSAKAGAQSEAPFFRLRALDDGALTGLISHRMVEPAEEEKQH |
| Ga0316620_111095271 | 3300033480 | Soil | MDKSAAIRVLPGSVVMFRGRRHQVMSAKSGAQGEAPFFRLRALDDGALTGLISHRMVEPDLEKTAQN |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |