Metagenome / Metatranscriptome Family F090643

Basic Information
Family ID	F090643
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	113 residues
Representative Sequence	TLTPAASSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Number of Associated Samples	91
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.83 %
% of genes near scaffold ends (potentially truncated)	29.63 %
% of genes from short scaffolds (< 2000 bps)	80.56 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Most Common Taxonomy
Group	Unclassified (52.778 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (15.741 % of family members)
Environment Ontology (ENVO)	Unclassified (25.926 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.259 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.72% β-sheet: 34.72% Coil/Unstructured: 55.56%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
b.40.2.1: Bacterial AB5 toxins, B-subunits	d6ro0f_	6ro0	0.73695
b.40.2.1: Bacterial AB5 toxins, B-subunits	d6ro0d_	6ro0	0.72915
b.40.2.1: Bacterial AB5 toxins, B-subunits	d6ro0b2	6ro0	0.70581
b.40.2.1: Bacterial AB5 toxins, B-subunits	d5elba_	5elb	0.68952
b.40.2.1: Bacterial AB5 toxins, B-subunits	d4fo2a_	4fo2	0.66168

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01765	RRF	2.78
PF07592	DDE_Tnp_ISAZ013	2.78
PF13442	Cytochrome_CBB3	1.85
PF12697	Abhydrolase_6	1.85
PF01134	GIDA	1.85
PF00679	EFG_C	1.85
PF03764	EFG_IV	1.85
PF08669	GCV_T_C	1.85
PF13620	CarboxypepD_reg	1.85
PF13432	TPR_16	1.85
PF05193	Peptidase_M16_C	1.85
PF08378	NERD	0.93
PF12867	DinB_2	0.93
PF13537	GATase_7	0.93
PF07883	Cupin_2	0.93
PF12704	MacB_PCD	0.93
PF00210	Ferritin	0.93
PF13641	Glyco_tranf_2_3	0.93
PF01904	DUF72	0.93
PF13414	TPR_11	0.93
PF01048	PNP_UDP_1	0.93
PF00578	AhpC-TSA	0.93
PF03576	Peptidase_S58	0.93
PF01569	PAP2	0.93
PF01734	Patatin	0.93
PF05681	Fumerase	0.93
PF13519	VWA_2	0.93
PF04607	RelA_SpoT	0.93
PF00719	Pyrophosphatase	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0233	Ribosome recycling factor	Translation, ribosomal structure and biogenesis [J]	2.78
COG0480	Translation elongation factor EF-G, a GTPase	Translation, ribosomal structure and biogenesis [J]	1.85
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.85
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.93
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.93
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.93
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.93
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.93
COG1951	Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain	Energy production and conversion [C]	0.93
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.93
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.93
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
All Organisms	root	All Organisms	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
cellular organisms	root	All Organisms → cellular organisms	47.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.37 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.19 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.26 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	3.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.93 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	2.78 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.93 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.93 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	2.78 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.93 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.93 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.78 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	2.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.78 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.85 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.93 %
Granulicella sp. SCN 62-9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. SCN 62-9	0.93 %
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	0.93 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000313\|WSSedB1CaDRAFT_10051371	Not Available	783	Open in IMG/M
3300001213\|JGIcombinedJ13530_104169177	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300003152\|Ga0052254_1143904	Not Available	525	Open in IMG/M
3300003432\|JGI20214J51088_10136535	Not Available	1735	Open in IMG/M
3300005436\|Ga0070713_102062491	Not Available	553	Open in IMG/M
3300005468\|Ga0070707_100714225	Not Available	965	Open in IMG/M
3300005529\|Ga0070741_10238731	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300005533\|Ga0070734_10001701	All Organisms → cellular organisms → Bacteria	30371	Open in IMG/M
3300005537\|Ga0070730_10117987	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300005563\|Ga0068855_100477669	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300005602\|Ga0070762_10393813	Not Available	891	Open in IMG/M
3300006052\|Ga0075029_100434407	Not Available	858	Open in IMG/M
3300006102\|Ga0075015_100986079	Not Available	515	Open in IMG/M
3300006162\|Ga0075030_100225145	All Organisms → cellular organisms → Bacteria → Acidobacteria	1507	Open in IMG/M
3300006176\|Ga0070765_101276761	Not Available	693	Open in IMG/M
3300008784\|Ga0103637_1002919	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300009175\|Ga0073936_10045548	All Organisms → cellular organisms → Bacteria	4150	Open in IMG/M
3300009177\|Ga0105248_10391254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	1565	Open in IMG/M
3300009177\|Ga0105248_12072325	Not Available	647	Open in IMG/M
3300009551\|Ga0105238_10238084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1797	Open in IMG/M
3300009826\|Ga0123355_10665684	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	1209	Open in IMG/M
3300010043\|Ga0126380_11711718	Not Available	565	Open in IMG/M
3300010375\|Ga0105239_10309973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1779	Open in IMG/M
3300010376\|Ga0126381_102557127	Not Available	731	Open in IMG/M
3300010379\|Ga0136449_102530491	Not Available	735	Open in IMG/M
3300010937\|Ga0137776_1359850	Not Available	935	Open in IMG/M
3300011120\|Ga0150983_11672023	All Organisms → cellular organisms → Bacteria → Acidobacteria	1063	Open in IMG/M
3300012199\|Ga0137383_10599069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	806	Open in IMG/M
3300012411\|Ga0153880_1120686	Not Available	587	Open in IMG/M
3300012469\|Ga0150984_109245110	Not Available	1225	Open in IMG/M
3300014156\|Ga0181518_10336055	Not Available	743	Open in IMG/M
3300014160\|Ga0181517_10025729	All Organisms → cellular organisms → Bacteria → Acidobacteria	3945	Open in IMG/M
3300014160\|Ga0181517_10032983	All Organisms → cellular organisms → Bacteria → Proteobacteria	3349	Open in IMG/M
3300014165\|Ga0181523_10320683	Not Available	872	Open in IMG/M
3300014494\|Ga0182017_10006965	All Organisms → cellular organisms → Archaea	8271	Open in IMG/M
3300014502\|Ga0182021_10149319	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	2720	Open in IMG/M
3300014502\|Ga0182021_13385694	Not Available	531	Open in IMG/M
3300014968\|Ga0157379_10415674	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300014969\|Ga0157376_11400124	Not Available	731	Open in IMG/M
3300016701\|Ga0181509_1226334	Not Available	666	Open in IMG/M
3300016750\|Ga0181505_10133934	Not Available	502	Open in IMG/M
3300016750\|Ga0181505_10947092	Not Available	805	Open in IMG/M
3300017821\|Ga0187812_1123947	Not Available	838	Open in IMG/M
3300017947\|Ga0187785_10610303	Not Available	561	Open in IMG/M
3300017948\|Ga0187847_10854800	Not Available	517	Open in IMG/M
3300017975\|Ga0187782_10002457	All Organisms → cellular organisms → Bacteria	13659	Open in IMG/M
3300017988\|Ga0181520_10037381	All Organisms → cellular organisms → Bacteria → Acidobacteria	4908	Open in IMG/M
3300017988\|Ga0181520_10306404	Not Available	1187	Open in IMG/M
3300018007\|Ga0187805_10487756	Not Available	577	Open in IMG/M
3300018033\|Ga0187867_10065198	Not Available	2160	Open in IMG/M
3300018468\|Ga0066662_10196029	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300019250\|Ga0187790_1458920	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300019275\|Ga0187798_1319084	Not Available	593	Open in IMG/M
3300019284\|Ga0187797_1022944	Not Available	654	Open in IMG/M
3300021168\|Ga0210406_10472291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300021403\|Ga0210397_10060203	All Organisms → cellular organisms → Bacteria	2460	Open in IMG/M
3300021403\|Ga0210397_10534347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300021420\|Ga0210394_11425244	Not Available	588	Open in IMG/M
3300021432\|Ga0210384_10224525	Not Available	1690	Open in IMG/M
3300021478\|Ga0210402_10478883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300021560\|Ga0126371_12224315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	662	Open in IMG/M
3300021860\|Ga0213851_1014623	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300021861\|Ga0213853_10606942	Not Available	509	Open in IMG/M
3300022499\|Ga0242641_1042173	Not Available	533	Open in IMG/M
3300022509\|Ga0242649_1028939	Not Available	702	Open in IMG/M
3300022522\|Ga0242659_1073228	Not Available	641	Open in IMG/M
3300022555\|Ga0212088_10000967	All Organisms → cellular organisms → Bacteria	64458	Open in IMG/M
3300022717\|Ga0242661_1084037	Not Available	646	Open in IMG/M
3300022718\|Ga0242675_1029072	Not Available	829	Open in IMG/M
3300023311\|Ga0256681_11838481	Not Available	802	Open in IMG/M
3300025913\|Ga0207695_10369080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	1321	Open in IMG/M
3300026550\|Ga0209474_10211408	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300027826\|Ga0209060_10002183	All Organisms → cellular organisms → Bacteria → Acidobacteria	18744	Open in IMG/M
3300027857\|Ga0209166_10081555	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300027884\|Ga0209275_10295432	Not Available	898	Open in IMG/M
3300027902\|Ga0209048_10267141	All Organisms → cellular organisms → Bacteria → Proteobacteria	1212	Open in IMG/M
3300027911\|Ga0209698_10487739	All Organisms → cellular organisms → Bacteria → Acidobacteria	955	Open in IMG/M
3300028800\|Ga0265338_10299106	All Organisms → cellular organisms → Bacteria → Acidobacteria	1170	Open in IMG/M
3300029701\|Ga0222748_1045386	Not Available	738	Open in IMG/M
3300031057\|Ga0170834_104138944	Not Available	624	Open in IMG/M
3300031057\|Ga0170834_104646208	Not Available	563	Open in IMG/M
3300031057\|Ga0170834_111194506	Not Available	791	Open in IMG/M
3300031128\|Ga0170823_14101828	Not Available	584	Open in IMG/M
3300031231\|Ga0170824_101529841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. SCN 62-9	927	Open in IMG/M
3300031231\|Ga0170824_121191146	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031232\|Ga0302323_100281806	All Organisms → cellular organisms → Bacteria → Acidobacteria	1716	Open in IMG/M
3300031474\|Ga0170818_101551466	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031718\|Ga0307474_10863290	Not Available	716	Open in IMG/M
3300032770\|Ga0335085_10146938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2964	Open in IMG/M
3300032770\|Ga0335085_10174574	All Organisms → cellular organisms → Bacteria	2662	Open in IMG/M
3300032770\|Ga0335085_11444466	Not Available	719	Open in IMG/M
3300032783\|Ga0335079_10638267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1119	Open in IMG/M
3300032805\|Ga0335078_10392613	Not Available	1825	Open in IMG/M
3300032805\|Ga0335078_12663583	Not Available	511	Open in IMG/M
3300032805\|Ga0335078_12670694	Not Available	510	Open in IMG/M
3300032828\|Ga0335080_10001778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21424	Open in IMG/M
3300032829\|Ga0335070_10275416	Not Available	1640	Open in IMG/M
3300032893\|Ga0335069_10049689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	5521	Open in IMG/M
3300032893\|Ga0335069_10086089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	4003	Open in IMG/M
3300032897\|Ga0335071_10798322	Not Available	893	Open in IMG/M
3300032898\|Ga0335072_10007266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16143	Open in IMG/M
3300032898\|Ga0335072_10056170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5261	Open in IMG/M
3300032954\|Ga0335083_10037105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5337	Open in IMG/M
3300032954\|Ga0335083_10248348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1593	Open in IMG/M
3300033158\|Ga0335077_12228046	Not Available	503	Open in IMG/M
3300034358\|Ga0370485_0260817	Not Available	560	Open in IMG/M
3300034818\|Ga0373950_0054759	Not Available	790	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.89%
Host-Associated	Host-Associated	11.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.04%
Aquatic	Environmental → Aquatic	26.85%
Plants	Host-Associated → Plants	10.19%
Arthropoda	Host-Associated → Arthropoda	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.11%
Freshwater	Environmental → Aquatic → Freshwater	19.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.26%
Sediment	Environmental → Aquatic → Sediment	3.70%
Marine	Environmental → Aquatic → Marine	2.78%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%
Peat	Environmental → Terrestrial → Peat	0.93%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	25.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.04%
Loam	Environmental → Terrestrial → Soil → Loam	6.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.78%
Lake	Environmental → Aquatic → Freshwater → Lake	2.78%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.78%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.93%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	22.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.78%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.78%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.85%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	15.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.70%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.78%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.78%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.78%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.85%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.93%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.93%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.93%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.93%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.93%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.93%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%
Wetland Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000313	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Cattail	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300008784	Microbial communities from wetland soil in Czech Republic - M1_cDNA	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012411	Freshwater microbial communities from Lake Alinen Mustaj?rvi, Finland - AM7a metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019250	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034358	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_16	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedB1CaDRAFT_100513711	3300000313	Wetland	MVITTSVDMKPLSLPPLKWVAGTISEILVQPGEQFYLFGVKPANGSGVFLRIADAHTGATISSVTTNNLVYDLMKEAYFRKLNVQVSYRDFGSDPQSGTNKLCIDRVILTQ*
JGIcombinedJ13530_1041691772	3300001213	Wetland	MKPAALPALAWAAGTVHEILVQPGEQFHLFAIQQTNAPTVFVRIADAHTGAPIGSVTTSSLVYDTLKEAYFRKLNVQVAYRDFGPGPQSGINKLCIGRVILTQ*
Ga0052254_11439041	3300003152	Sediment	HGVTNTGVIGDLRKGRSPSRPRNDRRYRMSAALTPAISKLANLTAITPLPSLQWAVGTVHEILVQPGEKFYIFSVRQADGTTLFLRIADPHTGAPLNGVNAENLVYDTMKEAYFRSLQVQAGYRDFGPDPQAGINKLVIDRVILTQ*
JGI20214J51088_101365352	3300003432	Wetland	MGGRYPLKWVAGTISEILVQPGEQFYLFGVKPANGSGVFLRIADAHTGATISSVTTNNLVYDLMKEAYFRKLNVQVSYRDFGSDPQSGTNKLCIDRVILTQ*
Ga0070713_1020624911	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TLTPAAGLRHALHTPPAPLPAFQWAVGTLHEILVQPGEHFYIFSLRQADNTTLFLRIADPHTGAPLGSVSAGNLVYDTMKEAYFRNLQVQVGYRDFGPDPQAGINKLVIDRVILTQ*
Ga0070707_1007142251	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSATSISAVASKLQAITHTLTLPALQWAVGTVHEILVQPGEKFFVFTVRQADNSTVILLIANAHTGAALHGVDADNLVYDTMKEAYFRSLQVQVGYRDFGFDAQ
Ga0070741_102387313	3300005529	Surface Soil	MSPKLSVDMKPLTLPALAWATGTVHEILAQPGEQFYLFSIHQTNGPTVFVRIADAHTGAPISSVTTGNLAYDLLKEAYFRKLNVQVAYRDFGPDPQSGINKLCIDRVILTQ*
Ga0070734_1000170134	3300005533	Surface Soil	MSPKLNIDMKPLTLPALAWVTGTVHEILVQPGEQFFVFAIRPVNGPTVLVRIADAHTGAPITNVTTDTLVYDTLKEAYFRKLTVQVAYRDFGPDPQSGINKLCIDRVILTQ*
Ga0070730_101179872	3300005537	Surface Soil	MSAAVTPTVGLRLAANMTTATQPSLQWATGMLHELLVQPAENFYIFSLRTSTNINVILRIADPHTGAPLAAVTAENLVYDVMKQAYFQKLQVEVGYRDFGPDPQAGINKLVIDRVILNQ*
Ga0068855_1004776692	3300005563	Corn Rhizosphere	MSAIATATVGLRLAANATPAALPALQWATGLLHEILVQPGESFYIFALRKTDNTTMILRIADPHTGASLTPVAAGNLIFDLMKEAYFRKLQVEVGYRDFGPDPQAGIEKLVIDRVILMQ*
Ga0070762_103938132	3300005602	Soil	MSATLSSAVPSKLQAITHTVTLPALQWAVGTVHEILVQPGEKFFVFTVRQADNSTLILLIADPHTGAPLHGVDADNLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ*
Ga0075029_1004344072	3300006052	Watersheds	MSATLTAAVHSKLSAITHNLTLPALQWAVGTVHEILVQPGEKFYIFSVVQADNSTLFLRIADPHTGTPLRGVDAENLVYDTMKEAYFRNLQVQVGYRDFGPDPQAGIENLTIDRVILTQ*
Ga0075015_1009860792	3300006102	Watersheds	MATKLALDVKPLALPSLAWVAGTVHELLVQPGEMFYVFVVQPASGPGVVVRIADPHTGTPLAGVTTGNLIFDAMKEAYFRKLNVQVAYRDFGPDPQAGINKLVIDRVILTQ*
Ga0075030_1002251452	3300006162	Watersheds	MSPTVSPKITIDMKPAALPALAWAVGTVHEVLMQPGEQFYLFSIKQANGTTLFVRIGDAHTGAPIASVTAGNLVYDVMKEAYFRKLNVQVAYRDFGPDPQSGINNLCIDRVILTQ*
Ga0070765_1012767611	3300006176	Soil	MSATLTPAASSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ*
Ga0103637_10029191	3300008784	Wetland Soil	TMSPKAAIDLQPAVLPTLVWAAGTVHEILMQPGEQFYLFSVRKADNTTVFVRIADPHTGAPIANVTSDNVLYDLMKTAYFQKLNVQVGYRDFGPDPQAGINKLVIDRVILTQ*
Ga0073936_100455482	3300009175	Freshwater Lake Hypolimnion	MSATLTPSVPSKLQSITQNLTLPALQWAVGTVHEILVQPGENFYVFSVRQANNSTVFLRIADPHTGAPLNGVHAENLVYDIMKEAYFRNLQVQVGYRDFGPDPQAGIEKLVIDRVILTQ*
Ga0105248_103912542	3300009177	Switchgrass Rhizosphere	MSATMTPTAFSKLANLTAITPLPALQWAVGTVHEILVQPGEKFYIFSVRQADGTTLFLRIADPHTGGHLNGVNAENLVYDTMKEAYFRNLQVQAGYRDFGPDPQAGINKLVIDRVILTQ*
Ga0105248_120723251	3300009177	Switchgrass Rhizosphere	MKKSVNMKPAALPSLAWAEGTVHEILVQPGEQFYLFSVRKANGPTVFLRIANAHTGAPISSVTTGNLVYDLMKEAYFRNLSVQVGYRDFGPDPQSGINKLCIDRVILTQ*
Ga0105238_102380842	3300009551	Corn Rhizosphere	MSATSTPAFRSNLSAITQTVTLPPLQWAAGTVHEILVQPGDKFYIFSIRQADNSTVFLRIADPHKGTSLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGPDPQAGIENLTIDRVILTQ*
Ga0123355_106656842	3300009826	Termite Gut	MSATLTPAGHSELAAITHNVNVALPAFQWAVGTVHEILVQPGEKFYIFSVRQADNSTLFLRIADPHTGSPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGPDPQAGIENLAIDRVILAQ*
Ga0126380_117117181	3300010043	Tropical Forest Soil	THTVTLPALQWAVGTIHEILVQPGEKFYLFSVRQANNTTVFLRIADPHSGAPLHGVNAENLEYDTMKEAYFRNLQVQVGYRDFGFDPQAGIENLTIDRVILTQ*
Ga0105239_103099732	3300010375	Corn Rhizosphere	MSATSTPAFRSNLSAITQTVTLPPLQWAAGTVHEILVQPGDKFYIFSVRQADNSTVFLRIADPHKGTSLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGPDPQAGIENLTIDRVILTQ*
Ga0126381_1025571272	3300010376	Tropical Forest Soil	MSATLTAPHSKLATLNHTVTLPALQWAVGTVHEILVQPGEKFYIFSVRQADNSTVFLRIADPHTGSPLHGVDAENLEYDTMKEAYFRNLQVQVGYRDFGFDPQAGIENLTIDRVILAQ*
Ga0136449_1025304911	3300010379	Peatlands Soil	MSATFTSALPSQLQAITHTVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNSTVILLLADSNTGAPLHGVNADNLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVLLTQ*
Ga0137776_13598501	3300010937	Sediment	MSPTLTRVHSKLAAVTFNLTLPAFQWAVGTVHEILVQPGEKFYIFSVRQADNSTLFLRIADPHTGAPLHGVDAENLIYDTMKEAYFRNLQVQVGYRDFGPDPQAGIENLTIDRVILT
Ga0150983_116720231	3300011120	Forest Soil	MKPAALPALAWATGTVHEILVQPGEQFYLFGIQQANGSTVFVRIADAHTGAPISSVTTGNLVYDVLKEAYYRKLNVQVAYRDFGPDPQSGINKLCIDRVILTQ*
Ga0150983_155670481	3300011120	Forest Soil	TLKGGNTMSPKLAVNMQPVALPALVWAAGTVHEILVQPGEQFYLFQIQQTSGPTVFLRIADPHTGAPLTSVTSDNLIYDLLKDAYFRKVNVQVAYRDFGPDPQSGINKLCIDRVLLTQ*
Ga0137383_105990692	3300012199	Vadose Zone Soil	MSATITPAVASKLQAITHTVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNSTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ*
Ga0153880_11206861	3300012411	Freshwater Sediment	MSATLTPSPDLQHALRAAQTVTPALQWVSGTVHELLAQPGEQFYVFSVRQANGVTMIVRIADPHTGAPLAGLTADNLIYDMMKEAYFRNLNVQVAYHDFGPDPQAGIERLVIDRVILTQ*
Ga0150984_1092451102	3300012469	Avena Fatua Rhizosphere	MSATVTPTIGLRLAANATTATLPSLQWATGLLHEILVQPGENFYIFSLRKTDNTTVILRIADPHTGAPLAGVASFNLVFDLMKQAYFGKLQVEVGYRDFGPDPQAGINKLVIDRVILTQ*
Ga0181518_103360551	3300014156	Bog	MSPQLAADAKPAALPPLAWAAGTVHEILVQPAEQFYVFTIQPATGSTMIVRIADPNTGAPMASVNTANLIYDVLKEAYFRKLNVQVAYRDFGPDPQSGSNKLCIDRVILTQ*
Ga0181517_100257295	3300014160	Bog	MTQIAPSKLQAITHKLTLPALQWAVGTVQEILVQPAEQFYLFSMLQANNTTMFLLIADSNTGAPLHHVNAENMIYDTMKQAYFRNLQVQVGYRDFGPDPQAGIEKLVIDRVILSQ*
Ga0181517_100329831	3300014160	Bog	MTQIAPSKLQAITHKLTLPALQWAVGTVQEILVQPAEQFYLFSVLQANNTTMFLLIADSNTGAPLHHVNAENMIYDTMKQAYFRNLQVQVGYRDFGPDPQAGIEKLVIDRVILSQ*
Ga0181523_103206832	3300014165	Bog	MSATLTPAAPSKLQAITHNLTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNSTVILLIADPHTGAPLHGVDAENLVYDTMKQAYFRNLQVQVGYRDFGSDPQAGIEKLVIDRVILTQ*
Ga0182017_1000696511	3300014494	Fen	METTASVNMKPLALPPLVWVAGTVYEILVQPGEQFYVFAVKPAQGSAVILRIADAHTGAPMSSVTAYNLVYDLMKEAYFRKLNVQVAYRDFGLDPQSGINKLCIDRVILTQ*
Ga0182021_101493193	3300014502	Fen	METTASVNMKPLTLPPLVWVAGTVYEILVQPGEQFYVFAVKPAQGSAVILRIADAHTGGPMSSVTADNLVYDLMKEAYFRKLNVQVAYRDFGLDPQSGINKLCIDRVILTQ*
Ga0182021_133856941	3300014502	Fen	MKPASLPALAWAAGTVHEILVQPGEEFYLFAIRQDNGSTVFVRIADAHTGSPMNHVTSDNLVYDVLKEAYFRKLSVQVAYRDFGPDPQAGINKLC
Ga0157379_104156742	3300014968	Switchgrass Rhizosphere	MSATMTPTAVSKLANLTAITPLPALQWAVGTVHEILVQPGEKFYIFSVRQADGTTLFLRIADPHTGGHLNGVNAENLVYDTMKEAYFRNLQVQAGYRDFGPDPQAGINKLVIDRVILTQ*
Ga0157376_114001241	3300014969	Miscanthus Rhizosphere	MKKSVNMKPAALPSLAWAEGTVHEILVQPGEQFYLFSVRKANGPTVFLRIANAHTGAPISSVTTGNLVYDLMKEAYFRNLSVQVGYRDFGPDPQRRWR*
Ga0181509_12263342	3300016701	Peatland	PTMTQIAPSKLQAITHKLTLPALQWAVGTVQEILVQPAEQFYLFSVLQANNTTMFLLIADSNTGAPLHHVNAENMIYDTMKQAYFRNLQVQVGYRDFGPDPQAGIEKLVIDRVILSQ
Ga0181505_101339341	3300016750	Peatland	PTMTQIAPSKLQAITHKLTLPALQWAVGTVQEILVQPAEQFYLFSMLQANNTTMFLLIADSNTGAPLHHVNAENMIYDTMKQAYFRNLQVQVGYRDFGPDPQAGIEKLVIDRVILSQ
Ga0181505_109470921	3300016750	Peatland	MSATLTPAAPSKLQAITHNLTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNSTVILLIADPHTGAPLHGVDAENLVYDTMKQAYFRNLQVQVGYRDFGSDPQAGIEKLVIDRVILTQ
Ga0187812_11239472	3300017821	Freshwater Sediment	MSATLTSTPTLMHIEKVNPAPLPALQWATGTVHEILAQPGEQFYIFSVRQANGSTMILRIADPHAGTPLTGLSADNLTYDMMKEAYFRNLNVQVAYRDFGADPQAGIEKLVIDRVILTQ
Ga0187785_106103032	3300017947	Tropical Peatland	GLGEIPMVVTTSVDMKPLALPPLTWISGTVSEILVQPGEQFYVFAVKPANGSGVFLRIADAHTGATISSVTTYNLVYDLMKEAYFRKLNVQVAYRDFGPDPQSGINKLCIDRVILMQ
Ga0187847_108548001	3300017948	Peatland	MSPTMTQIAPSKLQAITHKLTLPALQWAVGTVQEILVQPAEQFYLFSMLQANNTTMFLLIADSNTGAPLHHVNAENMIYDTMKQAYFRNLQVQVGYRDFGSDPQAGIEKLVIDRVILTQ
Ga0187782_100024576	3300017975	Tropical Peatland	MSATLTSAYGLQDIVNVPTEPPPALKWVEGTVHEILVQPGEQFYLFSVRQSNGNTLFLRIADPYTSAPLPGVTAGNLIYDILKEAYFRNFNVQVAYRDFGFDHQAGTNRLVIDRVILTH
Ga0181520_100373815	3300017988	Bog	MSPTMTQIAPSKLQAITHKLTLPALQWAVGTVQEILVQPAEQFYLFSMLQANNTTMFLLIADSNTGAPLHHVNAENMIYDTMKQAYFRNLQVQVGYRDFGPDPQAGIEKLVIDRVILSQ
Ga0181520_103064041	3300017988	Bog	MSPTMTQIAPSKLQAITHKLTLPALQWAVGTVQEILVQPAEQFYLFSVLQANNTTMFLLIADSNTGAPLHHVNAENMIYDTMKQAYFRNLQVQVGYRDFGPDPQAGIEKLVIDRVILSQ
Ga0187805_104877561	3300018007	Freshwater Sediment	MSPKPVIDMKPAALPALIWAVGTVHEILVQPGEQFYLFSIQQANGTTVFVRISDPHTGAPISSVTAGSLIYDTLKEAYFRKLSVQVGYRDFGPDPQSGINNLAIDRVILTQ
Ga0187867_100651983	3300018033	Peatland	MVETASVDMKLLSLPPLTWVFGTVNETLVQPGEQFYLFTVKSANGSGVLLRIADAHTGATISSVTTDNLVYDLMKEAYFRKLNVQVGYRDFGPDPQSGINKLCIDRVIMAQ
Ga0066662_101960292	3300018468	Grasslands Soil	MESHFLPHSQLSNWFGPANHKHRRENMTPTVTPTIGLRLAANATVATMPALQWATGLLHEILVQPGENFYIFSLRKTDNNTVILRIADPHTGAPLTPVAAGNLIFDLMKEAYFRKLQVEVGYRDFGPDPQAGINKLVIDRVILTQ
Ga0187790_14589201	3300019250	Peatland	MTERLAFEMKPQVLPSLAWVAGTVHELLVQPGEMFYVFVVQPVSGSAVIVRIADPHTGAPLPGVTTGNLVYDTMKEAYFRKLNVQVAYRDFGPDPQAGVNKLVIDRVILTQ
Ga0187798_13190841	3300019275	Peatland	MTTNLSIDIKPIALPSLAWVAGTVHELLVQPGENFYIFTVQPASGSTVIVRIADPHTGAPLAGATTGNLIYDTMKEAYFRKLNVQVAYRDFGPDPQAGINKLVIDRVILTQ
Ga0187797_10229441	3300019284	Peatland	MATKLALDLKPVALPNLTWVAGVVHEILVQPGEMFYVFVVQPANGAGVVVRIADPHTGTPLVGVTTANLIFDTMKEAYFRKLNVQVGYRDFGPDPQAGINKLVIDRVILTQ
Ga0210406_104722911	3300021168	Soil	MSATLTPAASSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0210397_100602031	3300021403	Soil	MSATLTPAASSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEK
Ga0210397_105343471	3300021403	Soil	PALQWAVGTVHEILVQPGEKFFVFTVRQADNSTLILLIADPHTGAPLHGVDADNLVYDTMKQAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0210394_114252442	3300021420	Soil	VTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0210384_102245253	3300021432	Soil	TLSSAVPSKLQAITHTVTLPALQWAVGTVHEILVQPGEKFFVFTVRQADNSTLILLIADPHTGAPLHGVDADNLVYDTMKQAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0210402_104788832	3300021478	Soil	MSATLTPAASSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQ
Ga0126371_122243151	3300021560	Tropical Forest Soil	VSPKLSVDMRPAALPALAWVAGTVHEILVQPGEQFYVFAIRPANGPNVIVRIADAHNGAPLNNVTTSTLVYDVLKEAYFRKLNVQVAYRDFGPDPQAGINKLCIDRVILTQ
Ga0213851_10146232	3300021860	Watersheds	MSPKMAIDMKPAALPALAWVAGTVHEILVQPGEQFYLFSIQPASGAAVFARIADPHTGVPMNAVNSDNLVYDVLKEAYFRKLPVQVACRDFGPDPQSGINKLCIDRVILNQ
Ga0213853_106069421	3300021861	Watersheds	TVHEILMQPGEQFYLFSIRQANGTTVFVRIADAHTGAPITSVTTGSVVYDLLKEAYFRKLNVQVAYRDFGPDPQSGINKLCIDRVILTQ
Ga0242641_10421732	3300022499	Soil	ATLTPAASSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0242649_10289391	3300022509	Soil	TLTPAASSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0242659_10732282	3300022522	Soil	SATLTPAVSSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0212088_1000096753	3300022555	Freshwater Lake Hypolimnion	MSATLTPSVPSKLQSITQNLTLPALQWAVGTVHEILVQPGENFYVFSVRQANNSTVFLRIADPHTGAPLNGVHAENLVYDIMKEAYFRNLQVQVGYRDFGPDPQAGIEKLVIDRVILTQ
Ga0242661_10840372	3300022717	Soil	TPAASSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0242675_10290722	3300022718	Soil	VMSATLTPAASSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0256681_118384812	3300023311	Freshwater	METTASVNMKPLTLPPLVWVAGTVYEILVQPGEQFYVFAVKPAQGSAVILRIADAHTGAPMSSVTAYNLVYDLMKEAYFRKLNVQVAYRDFGLDPQSGINKLCIDRVILTQ
Ga0207695_103690802	3300025913	Corn Rhizosphere	MSAIATATVGLRLAANATPAALPALQWATGLLHEILVQPGESFYIFALRKTDNTTMILRIADPHTGASLTPVAAGNLIFDLMKEAYFRKLQVEVGYRDFGPDPQAGIEKLVIDRVILMQ
Ga0209474_102114082	3300026550	Soil	HTVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNSTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0209060_100021832	3300027826	Surface Soil	MSPKLNIDMKPLTLPALAWVTGTVHEILVQPGEQFFVFAIRPVNGPTVLVRIADAHTGAPITNVTTDTLVYDTLKEAYFRKLTVQVAYRDFGPDPQSGINKLCIDRVILTQ
Ga0209166_100815553	3300027857	Surface Soil	MSAAVTPTVGLRLAANMTTATQPSLQWATGMLHELLVQPAENFYIFSLRTSTNINVILRIADPHTGAPLAAVTAENLVYDVMKQAYFQKLQVEVGYRDFGPDPQAGINKLVIDRVILNQ
Ga0209275_102954322	3300027884	Soil	MSATLSSAVPSKLQAITHTVTLPALQWAVGTVHEILVQPGEKFFVFTVRQADNSTLILLIADPHTGAPLHGVDADNLVYDTMKQAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0209048_102671413	3300027902	Freshwater Lake Sediment	MTAKLAFDIKPLTLPSLAWVVGTVHEILVQPGEKFYVFAVQPASGSTVIVRIADPHTGAPLAGVATGNLIYDTMKEAFFRKLNVQVAYRDFGPDPQAGINKLVIDRVILTQ
Ga0209698_104877392	3300027911	Watersheds	MSPTVSPKITIDMKPAALPALAWAVGTVHEVLMQPGEQFYLFSIKQANGTTLFVRIGDAHTGAPIASVTAGNLVYDVMKEAYFRKLNVQVAYRDFGPDPQSGINNLCIDRVILTQ
Ga0265338_102991062	3300028800	Rhizosphere	MSATSTPAAPSKSPANTHNQTLPALQWYKGIVWEILIQPGEKLYAFSVLQADNSTATLRIADPHTGAPLCAVGAENLIYDTMKEAYFRNVQVEVGFRDFGPGSQAGIGGNLVIDRVSLTRTLPAG
Ga0222748_10453861	3300029701	Soil	LTPAASSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIADPHTGAPLHGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0170834_1041389442	3300031057	Forest Soil	MSPKLAVNMKMIALPALQWAVGTVHEILMQPGEQFYLFSIRQADATTVFVQIVNPHTGAPVNSVTSDNVLYDLLNQAYFRNLSVQVGYRDFGPNPQSGINTLAIDRVILTQ
Ga0170834_1046462081	3300031057	Forest Soil	MSATLTSAVPSKLQAITHTSLTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNTTVILLIANPHTGAPFNGVDAENLVYDTMKEAYFRNLQVQVGYRDFGFDTQAGIEKLVIDRVILTQ
Ga0170834_1111945061	3300031057	Forest Soil	MSATITPAVPSALQSITHNVTPPALQWAVGTVHEILVQPAEKFYVFTVRQADNSTVILLIGDPYSGALLHGVDADNLVYDTMKQAYFRNVQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0170823_141018281	3300031128	Forest Soil	RTAPSEQQEARMSATLTSAVPSKLQAITHTSLTLPALQWAVGTVHEILVQPAEKFYVFTVRQADNSTVILLIGDPYSGALLHGVDADNLVYDTMKQAYFRNVQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0170824_1015298412	3300031231	Forest Soil	MSATITPAVPSALQSITHNVTPPALQWAVGTVHEILVQPAEKFYVFTVRQADNSTVILLIGDPYSGALLHGVDADNLVYDTMKAAYFRNVQVQVGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0170824_1211911462	3300031231	Forest Soil	MSPKLAVDMKPAALPALAWAAGTVHEILVQPGEQFYLFSIQQTSGPTVFVRIADPHTGAPLNSVSSDNLIYDLLKDAYFRKLNVQVAYRDFGPDPQAGINKLCIDRVILT
Ga0302323_1002818062	3300031232	Fen	MSPRIAIDMKPASLPALAWAAGTVHEILVQPGEEFYLFAIRQDNGSTVFVRIADAHTGSPMNHVTSDNLVYDVLKEAYFRKLSVQVAYRDFGPDPQAGINKLCIDRVILTQ
Ga0170818_1015514662	3300031474	Forest Soil	MSPKLAVDMKPAALPALAWAAGTVHEILVQPGEQFYLFSIQQTSGPTVFVRIADPHTGAPLNSVSSDNLIYDLLKDAYFRKLNVQVAYRDFGPDPQA
Ga0307474_108632901	3300031718	Hardwood Forest Soil	MSATLTPAVSSKLQAITHNVTLPALQWAVGTVHEILVQPGEKFYVFTVRQADNSTVILLIADPHTGAPLHGVNAENLVYDTMKEAYFRNLQVQAGYRDFGFDPQAGIEKLVIDRVILTQ
Ga0335085_101469384	3300032770	Soil	MSPKLALDIKPAALPALAWVTGTVHEILVQPGEQFYVFAIQPASGPTVIVRIADAHTGAPISNVTSDNLAYDTLKEAYFRKLNVQVGYRDFGPDPQAGINKLCIDRVILTQ
Ga0335085_101745742	3300032770	Soil	MTATLAVDMKPAALPALIWVTGTVHEILVQPGEQFYIFQVQPSTGASVVLRMADPHTGVPFTSVDAGNLVYDVMKEAYFRKLSVQVAYRDFGPDPQSGINKLCIDRVILTQ
Ga0335085_114444661	3300032770	Soil	MSPKLALDIKPAALPALAWVTGTVHEILVQPGEQFYVFAIQPAGGPTVIVRIADAHTGAPISNVTSDNLVYDTLKEAYFRKLSVQVGYRDFGPDPQAGINKLCIDRVILTQ
Ga0335079_106382672	3300032783	Soil	MSPKLAVDMKPAALPALVWVAGTVHEILVQPGEQFYLFAIQPTSGAAVFVRIADAHTGAPISNVNSDNLVYDVLKEAYFRKLNVQVAYRDFGPDPQAGINKLCIDRVILTQ
Ga0335078_103926131	3300032805	Soil	MGTKAVPAMTTLEVKPLQLPPLLWATGTVHEILVQPGEQFYIFGLRSATATVFLRIADPHTGAPFAGVTSDNLVFDLLKQAYLQKLPVQVGYRDFGPDPQAGINKLCIDRVILTQ
Ga0335078_126635831	3300032805	Soil	PALQWVAGLIHELLVQPGENFYIFAVQNAAGTTVMLRIADPHDGAPLTGVNAVNLVYDTMKEAYFRKLQVQVGYRDFGPDPQAGIEKLVIDRVILT
Ga0335078_126706941	3300032805	Soil	MSATLTPALGLKHLVTPAPPAVPALQWVTGTIHELLVQPGENFYVFAVRTSAGITDIVRIADPHTGAPLTDVNSDNLIYDTMKEAYFRNLQVEVGYRDFG
Ga0335080_100017783	3300032828	Soil	MSPKLAVDMKPAALPALVWVAGTVHEILVQPGEQFYLFAIQPTSGATVFVRIADAHTGAPISNVNSDNLVYDVLKEAYFRKLNVQVAYRDFGPDPQAGINKLCIDRVILTQ
Ga0335070_102754162	3300032829	Soil	MSATVTPTVGLRLAANATPAALPALQWAVGMLHEMLVQPGESFYIFSLRKTDNTTVILRIADPHTGIPLTPVAAGNLIFDLMKAAYFNKLQVEVGYRDFGPDPQAGIDKLVIDRVILTQ
Ga0335069_100496894	3300032893	Soil	MSATVTPTVGLRLAANATPAALPVLQWAVGMIHEMLVQPGESFYIFSLRKTDNTTVILRIADPHTGIPLTPVAAGNLIFDLMKAAYFNKLQVEVGYRDFGPDPQAGIDKLVIDRVILTQ
Ga0335069_100860893	3300032893	Soil	MSATVTPTVGLRLAANATPAALPALQWAVGMLHEMLVQPGESFYIFSLRKTDNTTVILRIADPHTGNPLTPVTAGNLIFDLMKAAYFNKLQVEVGYRDFGPDPQAGINKLVIDRVILTQ
Ga0335071_107983222	3300032897	Soil	MSATVTPTVGLRLAANATPAALPVLQWAVGMIHEMLVQPGESFYIFSLRKTDNTTVILRIADPHTGIPLTPVAAGNLIFDLMKAAYFNKLQVEVGYRDF
Ga0335072_100072665	3300032898	Soil	MSATLTPALGLKHLVTPAPPAVPALQWVTGTIHELLVQPGENFYVFAVRTSAGITDIVRIADPHTGAPLTDVNSDNLIYDTMKEAYFRNLQVEVGYRDFGPDPQSGINKLCIDRVILTQ
Ga0335072_100561704	3300032898	Soil	MGTTVAPTIGLRLAANKSLAVLPPLQWITGTLHEMLVQPGESFYVFSLRNANQTVILRIADPHTGAPLTAVTVANTVYDMMKEAYFRQIPVEVGYRDFGPDPQAGINNLCIDRVILTQ
Ga0335083_100371056	3300032954	Soil	MSPKLALDIKPAALPALAWVTGTVHEILVQPGEQFYVFAIQPASGPTVIVRIADAHTGAPISNVTSDNLAYDTLKEAYFRKLNVQVGYRDFGPDSQAGINKLCIDRVILTQ
Ga0335083_102483481	3300032954	Soil	EILVQPGEQFYIFQVQPSTGASVVLRMADPHTGVPFTSVDAGNLVYDVMKEAYFRKLSVQVAYRDFGPDPQSGINKLCIDRVILTQ
Ga0335077_122280461	3300033158	Soil	AGTVHEILVQPGEQFYLFAIQQTNGPTVFVRIADAHTGAPIHSVTAGNLIYDVLKEAYFRKLNVQVAYRDFGPDPQSGINKLCIDRVILTQ
Ga0370485_0260817_209_550	3300034358	Untreated Peat Soil	MDMTAALSFDIKPLTLPSLLWVAGTVHEILVQPGEAFYVFAIQPAKGPAVIVRIGDARTGASLSGVTAANLIYDTMKEVYFRKLTVQVAYRDFGPDPQAGINKLVIDRVVLTQ
Ga0373950_0054759_357_701	3300034818	Rhizosphere Soil	MATVNLKALNEPKPFTLPALSWAVGTVHEMLAQPGENFYVFAIRQSSGTTAILRIADPQTGAPLASVTSHNLIYDMLKEAYFRKANVQVAYRDFGLDPQSGINKLCIDRVILAQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090643

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign