NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090629

Metagenome Family F090629

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090629
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 85 residues
Representative Sequence MKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Number of Associated Samples 99
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 50.00 %
% of genes near scaffold ends (potentially truncated) 37.04 %
% of genes from short scaffolds (< 2000 bps) 81.48 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (65.741 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(7.407 % of family members)
Environment Ontology (ENVO) Unclassified
(40.741 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.185 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 26.83%    β-sheet: 6.10%    Coil/Unstructured: 67.07%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF03746LamB_YcsF 49.07
PF12973Cupin_7 5.56
PF03401TctC 2.78
PF00118Cpn60_TCP1 0.93
PF00106adh_short 0.93
PF11604CusF_Ec 0.93
PF00156Pribosyltran 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG15405-oxoprolinase subunit AAmino acid transport and metabolism [E] 49.07
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 2.78
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A65.74 %
All OrganismsrootAll Organisms34.26 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886007|SwRhRL2b_contig_448733Not Available1105Open in IMG/M
2162886013|SwBSRL2_contig_12377381Not Available808Open in IMG/M
2170459017|G14TP7Y02HCOLJNot Available732Open in IMG/M
2209111006|2214787737All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium742Open in IMG/M
3300000042|ARSoilYngRDRAFT_c00295All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae7266Open in IMG/M
3300000044|ARSoilOldRDRAFT_c024373Not Available544Open in IMG/M
3300000652|ARCol0yngRDRAFT_1018009Not Available542Open in IMG/M
3300002128|JGI24036J26619_10011068All Organisms → cellular organisms → Bacteria1622Open in IMG/M
3300002128|JGI24036J26619_10053609All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria788Open in IMG/M
3300003349|JGI26129J50193_1005706Not Available889Open in IMG/M
3300004047|Ga0055499_10041723All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria707Open in IMG/M
3300004058|Ga0055498_10047466Not Available748Open in IMG/M
3300004157|Ga0062590_102196359All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria578Open in IMG/M
3300004463|Ga0063356_106340765Not Available507Open in IMG/M
3300004479|Ga0062595_102068667Not Available553Open in IMG/M
3300004479|Ga0062595_102540494Not Available512Open in IMG/M
3300004480|Ga0062592_101149611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria722Open in IMG/M
3300005093|Ga0062594_101069070All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria785Open in IMG/M
3300005162|Ga0066814_10104832Not Available533Open in IMG/M
3300005164|Ga0066815_10098093Not Available547Open in IMG/M
3300005169|Ga0066810_10047320Not Available829Open in IMG/M
3300005290|Ga0065712_10011134All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia2446Open in IMG/M
3300005290|Ga0065712_10092939All Organisms → cellular organisms → Bacteria → Proteobacteria2309Open in IMG/M
3300005331|Ga0070670_100144533All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2057Open in IMG/M
3300005343|Ga0070687_101094276Not Available582Open in IMG/M
3300005345|Ga0070692_10036834All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas2484Open in IMG/M
3300005353|Ga0070669_100062445All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2739Open in IMG/M
3300005440|Ga0070705_100531011Not Available898Open in IMG/M
3300005456|Ga0070678_101724676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium590Open in IMG/M
3300005457|Ga0070662_100099033All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2203Open in IMG/M
3300005458|Ga0070681_11550327Not Available587Open in IMG/M
3300005529|Ga0070741_10008092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae21301Open in IMG/M
3300005535|Ga0070684_101360110Not Available668Open in IMG/M
3300005536|Ga0070697_100466006Not Available1102Open in IMG/M
3300005563|Ga0068855_101494272All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria694Open in IMG/M
3300005618|Ga0068864_101455620Not Available687Open in IMG/M
3300006178|Ga0075367_10391907Not Available878Open in IMG/M
3300006358|Ga0068871_101989644Not Available553Open in IMG/M
3300006755|Ga0079222_11050680Not Available708Open in IMG/M
3300006854|Ga0075425_100369211Not Available1652Open in IMG/M
3300006881|Ga0068865_100410994Not Available1110Open in IMG/M
3300006904|Ga0075424_101649229Not Available679Open in IMG/M
3300007076|Ga0075435_101967414Not Available513Open in IMG/M
3300009148|Ga0105243_10938709Not Available863Open in IMG/M
3300009174|Ga0105241_11116011Not Available743Open in IMG/M
3300009551|Ga0105238_11413798Not Available723Open in IMG/M
3300009553|Ga0105249_10544139Not Available1211Open in IMG/M
3300010371|Ga0134125_10206268All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2187Open in IMG/M
3300010375|Ga0105239_10443582Not Available1472Open in IMG/M
3300010397|Ga0134124_11994255Not Available617Open in IMG/M
3300010403|Ga0134123_12126303Not Available622Open in IMG/M
3300012476|Ga0157344_1002872Not Available939Open in IMG/M
3300012485|Ga0157325_1002917Not Available909Open in IMG/M
3300012501|Ga0157351_1010506Not Available842Open in IMG/M
3300012511|Ga0157332_1028963Not Available694Open in IMG/M
3300012517|Ga0157354_1010060Not Available933Open in IMG/M
3300012893|Ga0157284_10142306Not Available673Open in IMG/M
3300012896|Ga0157303_10161102Not Available612Open in IMG/M
3300012906|Ga0157295_10014192All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1480Open in IMG/M
3300012985|Ga0164308_10124282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1861Open in IMG/M
3300013307|Ga0157372_13393606Not Available507Open in IMG/M
3300014308|Ga0075354_1009902Not Available1364Open in IMG/M
3300014326|Ga0157380_10999070All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria870Open in IMG/M
3300014968|Ga0157379_10833227Not Available872Open in IMG/M
3300015371|Ga0132258_10286320All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4046Open in IMG/M
3300015371|Ga0132258_11087381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2021Open in IMG/M
3300015372|Ga0132256_100881042Not Available1011Open in IMG/M
3300015372|Ga0132256_102387688Not Available631Open in IMG/M
3300015373|Ga0132257_101965239Not Available754Open in IMG/M
3300015374|Ga0132255_103319349Not Available686Open in IMG/M
3300017792|Ga0163161_11151864Not Available669Open in IMG/M
3300019356|Ga0173481_10384987Not Available681Open in IMG/M
3300022880|Ga0247792_1000326All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales10444Open in IMG/M
3300022892|Ga0247753_1012952Not Available877Open in IMG/M
3300023072|Ga0247799_1000014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root146221410Open in IMG/M
3300025315|Ga0207697_10045662All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1803Open in IMG/M
3300025315|Ga0207697_10128843Not Available1093Open in IMG/M
3300025900|Ga0207710_10016982All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3083Open in IMG/M
3300025901|Ga0207688_10091238Not Available1750Open in IMG/M
3300025903|Ga0207680_10482110Not Available882Open in IMG/M
3300025907|Ga0207645_10687774Not Available695Open in IMG/M
3300025911|Ga0207654_11088890Not Available582Open in IMG/M
3300025934|Ga0207686_10810927Not Available751Open in IMG/M
3300025936|Ga0207670_10332903Not Available1198Open in IMG/M
3300026041|Ga0207639_12161430Not Available518Open in IMG/M
3300026067|Ga0207678_11594776Not Available575Open in IMG/M
3300026118|Ga0207675_101249674Not Available763Open in IMG/M
3300026995|Ga0208761_1001426Not Available1403Open in IMG/M
3300027523|Ga0208890_1007559Not Available1372Open in IMG/M
3300027560|Ga0207981_1081256Not Available596Open in IMG/M
3300027617|Ga0210002_1022397Not Available1024Open in IMG/M
3300027682|Ga0209971_1076881Not Available812Open in IMG/M
3300027876|Ga0209974_10053921All Organisms → cellular organisms → Bacteria → Proteobacteria1355Open in IMG/M
(restricted) 3300031150|Ga0255311_1069885Not Available747Open in IMG/M
(restricted) 3300031150|Ga0255311_1099861Not Available628Open in IMG/M
(restricted) 3300031197|Ga0255310_10007278All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2857Open in IMG/M
(restricted) 3300031197|Ga0255310_10085635Not Available839Open in IMG/M
(restricted) 3300031248|Ga0255312_1009500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2314Open in IMG/M
(restricted) 3300031248|Ga0255312_1016364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1769Open in IMG/M
3300031547|Ga0310887_10019557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2660Open in IMG/M
3300031716|Ga0310813_10004808All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales8319Open in IMG/M
3300031847|Ga0310907_10450886All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria679Open in IMG/M
3300031858|Ga0310892_10700746Not Available694Open in IMG/M
3300031908|Ga0310900_10124742All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1698Open in IMG/M
3300031944|Ga0310884_10153536Not Available1190Open in IMG/M
3300032000|Ga0310903_10505900Not Available631Open in IMG/M
3300033412|Ga0310810_10023569All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14627459Open in IMG/M
3300033513|Ga0316628_100152244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14622708Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.56%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.63%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.63%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere4.63%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere3.70%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.78%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.78%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.78%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.85%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil1.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.85%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.85%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.93%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886007Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
2170459017Litter degradation ZMR4EngineeredOpen in IMG/M
2209111006Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0Host-AssociatedOpen in IMG/M
3300000042Arabidopsis rhizosphere soil microbial communities from the University of North Carolina - sample from Arabidopsis soil youngHost-AssociatedOpen in IMG/M
3300000044Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil oldHost-AssociatedOpen in IMG/M
3300000652Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNAHost-AssociatedOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300003349Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PMHost-AssociatedOpen in IMG/M
3300004047Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012476Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610Host-AssociatedOpen in IMG/M
3300012485Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610Host-AssociatedOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012517Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610EnvironmentalOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014308Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300022880Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6EnvironmentalOpen in IMG/M
3300022892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5EnvironmentalOpen in IMG/M
3300023072Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026995Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)EnvironmentalOpen in IMG/M
3300027523Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)EnvironmentalOpen in IMG/M
3300027560Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)EnvironmentalOpen in IMG/M
3300027617Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SwRhRL2b_0920.000033502162886007Switchgrass RhizosphereMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKRK
SwBSRL2_0306.000029302162886013Switchgrass RhizosphereMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK
4ZMR_034251002170459017Switchgrass, Maize And Mischanthus LitterMQNGEGRLIGPNMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
22138127492209111006Arabidopsis RhizosphereMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
ARSoilYngRDRAFT_0029573300000042Arabidopsis RhizosphereMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK*
ARSoilOldRDRAFT_02437313300000044Arabidopsis RhizosphereIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
ARCol0yngRDRAFT_101800923300000652Arabidopsis RhizosphereSMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
JGI24036J26619_1001106813300002128Corn, Switchgrass And Miscanthus RhizosphereMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPE
JGI24036J26619_1005360913300002128Corn, Switchgrass And Miscanthus RhizosphereMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRILPSWSLPVYFGMHMDEKDKKPEKTATKRK*
JGI26129J50193_100570613300003349Arabidopsis Thaliana RhizosphereMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0055499_1004172313300004047Natural And Restored WetlandsMKRIFLLLVISAFAVSPGAAASKQRSKQATEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKIAKKKK*
Ga0055498_1004746623300004058Natural And Restored WetlandsMKRIFLLLVISAFAVSPGAAASKQRSKQATEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPE
Ga0062590_10219635913300004157SoilMKSIFLLLVISAFAISPAVAAGKQKSKETTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKT
Ga0063356_10634076513300004463Arabidopsis Thaliana RhizosphereMKSIFLLLVISALAISPAAAAGKQKSKEAIEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0062595_10206866723300004479SoilAISPATAASKQKSKQATEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKAKEPQKTAKQKK*
Ga0062595_10254049413300004479SoilMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK*
Ga0062592_10114961113300004480SoilVYRIDFMQNGQGQQVEPQGASMKSIFLLLVISAFAISPAVAAGKQKSKETTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0062594_10106907023300005093SoilMKSIFLLLVISAFAISPAVAAGKQKSKETTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0066814_1010483213300005162SoilMKRIIVLLVFSVFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKN*
Ga0066815_1009809323300005164SoilMGASMKRIIVLLVFSVFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALSDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0066810_1004732023300005169SoilMQNGAGRLIGPNMGASMKRIIVLLVFSVFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALSDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0065712_1001113453300005290Miscanthus RhizosphereMKSIFLLLVISAFAISPATAASKQKSKQATEAEDIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKVKEPQKTAKQKK*
Ga0065712_1009293933300005290Miscanthus RhizosphereMQNGEGRLIGPNMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0070670_10014453313300005331Switchgrass RhizosphereMGASMKSIFLLLVISAFAISPATAASKQKSKQATEAEDIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKVKEPQKTAKQKK*
Ga0070687_10109427613300005343Switchgrass RhizospherePATAASKQKSKQATEAEDIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKVKEPQKTAKQKK*
Ga0070692_1003683433300005345Corn, Switchgrass And Miscanthus RhizosphereLVGPDMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK*
Ga0070669_10006244513300005353Switchgrass RhizosphereIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK*
Ga0070705_10053101123300005440Corn, Switchgrass And Miscanthus RhizosphereMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0070678_10172467623300005456Miscanthus RhizosphereMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0070662_10009903323300005457Corn RhizosphereMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKRK*
Ga0070681_1155032723300005458Corn RhizosphereVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0070741_10008092293300005529Surface SoilMKKIIILFAAMAFAVSPAVAASKQKSKEAKEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGTHMDETGKKPEKTAKKKKM*
Ga0070684_10136011013300005535Corn RhizosphereVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0070697_10046600623300005536Corn, Switchgrass And Miscanthus RhizosphereMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK*
Ga0068855_10149427223300005563Corn RhizosphereMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKP
Ga0068864_10145562013300005618Switchgrass RhizosphereKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0075367_1039190713300006178Populus EndosphereMRASMKSIFLLLVISAFAISPATAASKQKSKQATEAEDIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKVKEPQKTAKQKK*
Ga0068871_10198964423300006358Miscanthus RhizosphereLIGPNMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0079222_1105068013300006755Agricultural SoilMKKVVILFAAMAFAVTPAVAATKQKSKEAKEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGTHMDETGKKPEKTAKKKKM*
Ga0075425_10036921133300006854Populus RhizosphereMKKVVILFAAMAFAVSPAIAATKQKSKEAREAEEIAKQHDNTLRALRDGLPLILPSWSLPIYFGAHMDETGKKPEKTAKKKKM*
Ga0068865_10041099443300006881Miscanthus RhizosphereMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKMK*
Ga0075424_10164922913300006904Populus RhizosphereVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK*
Ga0075435_10196741413300007076Populus RhizosphereMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0105243_1093870913300009148Miscanthus RhizosphereIIVLLVFSVFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK*
Ga0105241_1111601123300009174Corn RhizosphereMQNGEGRLIGPNMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK*
Ga0105238_1141379823300009551Corn RhizosphereMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKRK*
Ga0105249_1054413933300009553Switchgrass RhizosphereMQNGEGRLIGPNMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKRK*
Ga0134125_1020626853300010371Terrestrial SoilMKKFVILIAATIFAVSPAIAAKKKSQEAKEADEIAKQHDNTLRALRDSLPLILPSWSLPVYFGTHMDETGKKPEKSAKKKKM*
Ga0105239_1044358233300010375Corn RhizosphereMKSIFLLLVISAFAISPATAASKQKSKQATEAEDIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKVKEPQKTVKQKK*
Ga0134124_1199425533300010397Terrestrial SoilFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0134123_1212630313300010403Terrestrial SoilQGQQVEPQGASMKSMFLLLVISAFAISPAVAAGKQKSKETTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0157344_100287243300012476Arabidopsis RhizosphereSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK*
Ga0157325_100291723300012485Arabidopsis RhizosphereMQNGEGRLIGPNMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMQMDEKDKKPEKTATKKK*
Ga0157351_101050613300012501Unplanted SoilMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTAT
Ga0157332_102896313300012511SoilMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0157354_101006023300012517Unplanted SoilMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDE
Ga0157284_1014230623300012893SoilMQNGEGRLIGPNMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK*
Ga0157303_1016110223300012896SoilVYRIDFMQNSQGQPSGNMGVSMKSIFLLLVISVFAISPATAASKQKSKQATEAEDIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKVKEPQKTAKQKK*
Ga0157295_1001419233300012906SoilMQNGEGRLIGPNMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHIDEKDKKPKKTATKKK*
Ga0164308_1012428213300012985SoilRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK*
Ga0157372_1339360613300013307Corn RhizospherePQGASMKSIFLLLVISAFAISPAVAAGKQKSKETTEAEEIAKQHDNTLRALLDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0075354_100990233300014308Natural And Restored WetlandsMKRIFLLLVISAFAVSPGAAASKQRSKQATEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEK
Ga0157380_1099907023300014326Switchgrass RhizosphereMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVFFGMHMDEKDKKKPEKTATKKK*
Ga0157379_1083322713300014968Switchgrass RhizosphereMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKRK*
Ga0132258_1028632053300015371Arabidopsis RhizosphereVYRIDFMQNSYGQQSGNMGASMKGVFLLLVISAFAISPATAASKQKSKQATEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGTHMDEKMKEPQKTAKQKK*
Ga0132258_1108738153300015371Arabidopsis RhizosphereVYRIDFMQNGQGQQVEPQGASMKSIFLLLVISAFAISPAVAGGKQKSKETTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0132256_10088104223300015372Arabidopsis RhizosphereMRVPVYRIDFMQNRQGQQVEPQGASMKSIFLLLVISAFAISPAVAGGKQKSKETTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0132256_10238768823300015372Arabidopsis RhizosphereMKSIFLLLVISAFAISPATAASKQKSKKATEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGTHMDEKMKEPQKTAKQKK*
Ga0132257_10196523913300015373Arabidopsis RhizosphereMRVPVYRIDFMQNRQGQQVEPQGASMKSIFLLLVISAFAISPAVAAGKQKSKEATEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0132255_10331934923300015374Arabidopsis RhizosphereVYRIDFMQNRQGQQVEPQGASMKSIFLLLVISAFAISPAVAAGKQKSKETTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK*
Ga0163161_1115186413300017792Switchgrass RhizosphereMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK
Ga0173481_1038498713300019356SoilMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKRK
Ga0247792_100032683300022880SoilMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Ga0247753_101295223300022892SoilMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Ga0247799_1000014253300023072SoilRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Ga0207697_1004566233300025315Corn, Switchgrass And Miscanthus RhizosphereMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK
Ga0207697_1012884333300025315Corn, Switchgrass And Miscanthus RhizosphereMGASMKSIFLLLVISAFAISPATAASKQKSKQATEAEDIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKVKEPQKTAKQKK
Ga0207710_1001698243300025900Switchgrass RhizosphereMKSIFLLLVISAFAISPATAASKQKSKQATEAEDIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKVKEPQKTAKQKK
Ga0207688_1009123833300025901Corn, Switchgrass And Miscanthus RhizosphereMQNGEGRLIGPNMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK
Ga0207680_1048211023300025903Switchgrass RhizosphereMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Ga0207645_1068777413300025907Miscanthus RhizosphereLVGPDMGASMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK
Ga0207654_1108889023300025911Corn RhizosphereEGRLIGPNMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK
Ga0207686_1081092723300025934Miscanthus RhizosphereMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMD
Ga0207670_1033290313300025936Switchgrass RhizosphereMGASMKSIFLLLVISAFAISPATAASKQKSKQATEAEDIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKVKEPQKTAK
Ga0207639_1216143023300026041Corn RhizosphereVISAFAISPAVAAGKQKSKETTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Ga0207678_1159477623300026067Corn RhizosphereKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATKKK
Ga0207675_10124967433300026118Switchgrass RhizosphereLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Ga0208761_100142643300026995SoilMGASMKRIIVLLVFSVFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Ga0208890_100755953300027523SoilAVPATAVAKQKSKQQTEADEIAKQHDNTLRALSDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Ga0207981_108125613300027560SoilMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMD
Ga0210002_102239723300027617Arabidopsis Thaliana RhizosphereMGASMKSIFLLLVISAFAISPAAAASKQKSKQATEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Ga0209971_107688113300027682Arabidopsis Thaliana RhizosphereMKSIFLLLVISAFAISPAAAASKQKSKQATEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKPAPKKK
Ga0209974_1005392133300027876Arabidopsis Thaliana RhizosphereMKSIFLLLVISAFAISPAAAASKQKSKQATEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKP
(restricted) Ga0255311_106988523300031150Sandy SoilMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPE
(restricted) Ga0255311_109986113300031150Sandy SoilISVFAISPAAGASKQKSKQATEAEEIAKQHDNTLRALRDGLPLILPTWSLPVYFNLNKDGKTEKSQKTAKQKK
(restricted) Ga0255310_1000727853300031197Sandy SoilMQNGEGRLIGPNMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
(restricted) Ga0255310_1008563533300031197Sandy SoilVKSIFLLLVISVFAISPAAGASKQKSKQATEAEEIAKQHDNTLRALRDGLPLILPTWSLPVYFNLNKDGKTEKSQKTAKQKK
(restricted) Ga0255312_100950023300031248Sandy SoilVEPQGASVKSIFLLLVISVFAISPAAGASKQKSKQATEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK
(restricted) Ga0255312_101636433300031248Sandy SoilMGASMKSIFLLLVISVFAISPAAGASKQKSKQATEAEEIAKQHDNTLRALRDGLPLILPTWSLPVYFNLNKDGKTEKSQKTAKQKK
Ga0310887_1001955723300031547SoilMQNGEGRLIGPNMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKRK
Ga0310813_1000480813300031716SoilMKRIFLLLVISAFAISPAAAAGKQKSKEAIEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHLDEKDKKPEKTAKKKK
Ga0310907_1045088623300031847SoilMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKRK
Ga0310892_1070074623300031858SoilLIGPNMGASMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKRK
Ga0310900_1012474233300031908SoilMKRIIVLLVFSAFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATK
Ga0310884_1015353613300031944SoilMKRIIVLLVFSAFIAVPATASAKQKSKQPTEAEEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKKPEKTATK
Ga0310903_1050590033300032000SoilFIAVPATAVAKQKSKQQTEADEIAKQHDNTLRALRDGLPLILPSWSLPVYFGMHMDEKDKKPEKTATKKK
Ga0310810_1002356923300033412SoilMGASMKSIFLLLVISAFAISPATAASKQKSKQATETEDIAKQHDNTLRALRDGLPLILPSWSLPVYFGAHMDEKVKEPQKTAKQKK
Ga0316628_10015224443300033513SoilMGASMKSIILLLVISAFAVSPAVAASKHKSKQATEAEEIAKQHDNTLRALRDGLPLILPTWSLPIYFNMNKDEKSDKTEKTAKKKK


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