NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090606

Metagenome Family F090606

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090606
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 74 residues
Representative Sequence APVVDKADDAGPQADESGGKRGLTPNCEKELRRTADLLRFFANRIQAGEETQSVVADMRQQEKRISSVCPD
Number of Associated Samples 90
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 3.70 %
% of genes from short scaffolds (< 2000 bps) 1.85 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (97.222 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(14.815 % of family members)
Environment Ontology (ENVO) Unclassified
(26.852 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.444 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.40%    β-sheet: 0.00%    Coil/Unstructured: 59.60%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 108 Family Scaffolds
PF12071DUF3551 5.56
PF04392ABC_sub_bind 3.70
PF07369DUF1488 3.70
PF08241Methyltransf_11 3.70
PF09209CecR_C 2.78
PF13649Methyltransf_25 2.78
PF13467RHH_4 1.85
PF13505OMP_b-brl 1.85
PF16694Cytochrome_P460 1.85
PF13343SBP_bac_6 0.93
PF00132Hexapep 0.93
PF13539Peptidase_M15_4 0.93
PF13229Beta_helix 0.93
PF10137TIR-like 0.93
PF00005ABC_tran 0.93
PF00589Phage_integrase 0.93
PF09335SNARE_assoc 0.93
PF12680SnoaL_2 0.93
PF00196GerE 0.93
PF02627CMD 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 108 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 3.70
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.93
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.93
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.93
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.93
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A97.22 %
All OrganismsrootAll Organisms2.78 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300010043|Ga0126380_10005391All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium5408Open in IMG/M
3300010358|Ga0126370_11899952All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis579Open in IMG/M
3300012208|Ga0137376_10121895Not Available2226Open in IMG/M
3300032068|Ga0318553_10244203All Organisms → cellular organisms → Bacteria938Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil14.81%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil8.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.56%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil5.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.70%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.78%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere2.78%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.78%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.85%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.93%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.93%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.93%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.93%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.93%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.93%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300000793Forest soil microbial communities from Amazon forest - 2010 replicate II A001EnvironmentalOpen in IMG/M
3300000816Forest soil microbial communities from Amazon forest - 2010 replicate II A10EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001139Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soilEnvironmentalOpen in IMG/M
3300001904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2Host-AssociatedOpen in IMG/M
3300001978Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6Host-AssociatedOpen in IMG/M
3300001990Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3Host-AssociatedOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300002126Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5Host-AssociatedOpen in IMG/M
3300002459Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6Host-AssociatedOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004009Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005204Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2EnvironmentalOpen in IMG/M
3300005288Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006194Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026013Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026793Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A3a-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027427Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027743Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A01DRAFT_103809413300000580Forest SoilKPVAIENKPSAIATENKAPLVDDRVNDARPKPDDVSGRPSLTPDCAKELRRTADLLRFFANRIQAGEEVQSVVADMRQQEKRITAVCPDLSDR*
AF_2010_repII_A01DRAFT_107791913300000580Forest SoilVIDKAKDAAPQADGSSGKPGLTPDCEKELRHTADLLRFLANRIQAGEEIQSVVGDMRRQEKRIVAVCPD*
AF_2010_repII_A001DRAFT_1000089173300000793Forest SoilVIDKEKDAAPQADGSSGKPGLTPDCEKELRHTADLLRFLANRIQAGEEIQSVVGDMRRQEKRIVAVCPD*
AF_2010_repII_A10DRAFT_101950223300000816Forest SoilPPLVEGKVNDARPKPDDDASGKPGLSPGCEKELRRTADLLRFFGNRIQAGEETPSVVADMRQQEKRISAVCPELTDR*
JGI1027J12803_10100768213300000955SoilIEDKAPVAKQDTQGDASPQAVGSVGKPGLTPNCEKELRRTADLLRFFANRIQGGEDSQSVVANMRQQEKKILAVCE*
JGI10220J13317_1051982233300001139SoilAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
JGI24736J21556_105022813300001904Corn RhizosphereTAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
JGI24747J21853_100061913300001978Corn, Switchgrass And Miscanthus RhizosphereKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
JGI24737J22298_1021216513300001990Corn RhizosphereLEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
JGI24738J21930_1002968023300002075Corn RhizosphereKVETAPIAKEDKPDTARXQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
JGI24035J26624_100079643300002126Corn, Switchgrass And Miscanthus RhizosphereKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
JGI24751J29686_1002529933300002459Corn, Switchgrass And Miscanthus RhizosphereVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRRQEKKISAVCD*
JGI25405J52794_1008059613300003911Tabebuia Heterophylla RhizosphereNDAGPQADESNGKRGLTPNCKKELRRTADLLRFFANRIQAGEEIQSVVADMRRQEKRISEVCPD*
JGI25405J52794_1015779813300003911Tabebuia Heterophylla RhizosphereALPVDKANDARPQADESSGKRGLTPDCEKELRRTADLLRFFANRIQAGEEIQSVVADMRRHEKRIAAICPD*
Ga0055437_1005698233300004009Natural And Restored WetlandsVAGEDKAPVANQDSQGETGPQAVGSVAKPGLTPDCEKELRRAADLLRFFANRIQVGEDTQAIVADMRQQEKKISAVCE*
Ga0062590_10173074713300004157SoilVAKVEKAPIAKEDKSAAATPPTDNNSKPGSTTNCEKELRHTADLLRFFANRLQGGEDTQSVVADMRQQEKKISAVCEQ*
Ga0062591_10044552113300004643SoilPENKTPVAKVETAPTAQEEKSEVARPQADDSGKPGATPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKIAAVCD*
Ga0062594_10305580513300005093SoilVTAPVVDKANDAGPKADESSAEKCEMELRRTADVLRFSANRIQAGEETQSVVADMRRQEKRVSAACPN*
Ga0068997_1015952813300005204Natural And Restored WetlandsVAKEDKVPVAGEDKAPVANQDSQGETGPQAVGSVAKPGLTPDCEKELRRAADLLRFFANRIQVGEDTQSIVADMRQQEKKISAVCE*
Ga0065714_1045739623300005288Miscanthus RhizosphereKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0065705_1095523313300005294Switchgrass RhizosphereVEEKAPVVDKANDAAPQPEEASGKQAFTPNCEKEIRRTADLLRFFANRIQAGEETQSVVGDMRQQEKRIAAACPD*
Ga0070683_10195436813300005329Corn RhizosphereAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0066388_10018165713300005332Tropical Forest SoilKADEPSGKNCEKELRRLADLFRSFADRIQSGEEPQSVVADMRQQEKRISAACPD*
Ga0066388_10186980123300005332Tropical Forest SoilEEKPPIASEVTAPVVDKANDAGPKADEPSGKNCEGELRRTADLFKTFVNRIQSREEPQSVVADMRQQEKRISAACPD*
Ga0066388_10781580413300005332Tropical Forest SoilPLVEDKTNDARAQANEPSGKPGLTPNCEKELRRTADLLRFFTNRIQTGEKRKSVVADMRQQEKRISAACPD*
Ga0070682_10150661813300005337Corn RhizospherePVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0068868_10002094613300005338Miscanthus RhizosphereDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
Ga0066905_10047106513300005713Tropical Forest SoilRPTADESSGGRDLTQICEKELRRTADLIRFFANRLQMGEESKSVVADMRQQEKKISEVCHD*
Ga0066905_10077536713300005713Tropical Forest SoilPTAAMEVTAPVVDKANDAGPQANEPSGKNCETELRRTGDLFSSFVNRIQSGEETQSVVADMRQQEKRVTAACPD*
Ga0066905_10107341113300005713Tropical Forest SoilKAPVAKIEMAPAAKDDTTDAAGQQTGDNSKPPSTPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRRQEKKISAVCD*
Ga0066905_10226533113300005713Tropical Forest SoilVKDKTNDARAQANEPSGKPGLTPNCEKELRRTADLLRFFANRIQTGEKRKSVVADMKQQEKRISAVCSD*
Ga0068858_10037029333300005842Switchgrass RhizosphereVTAPVVDKATDAGPKADEPSAENCEKELRRTADVLRFSANRIQAGEETQSVVADMRQQEKRVSAACPELSDR*
Ga0081455_1025576123300005937Tabebuia Heterophylla RhizosphereDEPSVDKATDAGRQVDEPSGKNCEKELRRTADLFSSFVNRIQSGEEAQSVVADMRQQEKRVTAACPD*
Ga0075427_1003043233300006194Populus RhizosphereKANDAGPQAEEASGKQAFTPNCEKEIRRTADLLRFFANRIQAGEETQSVVGDMRQQEKRIAVVCPD*
Ga0075421_10076073413300006845Populus RhizosphereEEKPPIASEVTAPVVDNKANDAGPKADEPSGKNCEKELWRTADLFRSFVNRIQSGEEPQSVVADMRQQEKRIAAACPD*
Ga0075425_10021618433300006854Populus RhizosphereANDARAQADEPSGKPGLTPNCEKELRRTADLLRFYANRIQAGEEIQSVVADMRQQEKRISAVCTD*
Ga0075434_10180867813300006871Populus RhizosphereARAQADEPSGKPGLTPNCEKELRRTADLLRFYANRIQAGEEIQSVVADMRQQEKRISAVCTD*
Ga0075429_10023069543300006880Populus RhizospherePIASEVTAPVVDKANDAGPQANEPSDKNCEKELRRLADLFRSFANRLQSGEEPQSVVADMRQQEKRISAVCPD*
Ga0075424_10198163823300006904Populus RhizosphereVAIEDKPPPVAIEAKAPLVEDKANDARAQADEPSGKPGLTPNCEKELRRTADLLRFFANRIQTGEEIQSVVADMRQQEKRISAVCSD*
Ga0075419_1021059013300006969Populus RhizosphereAKPVPVEEKPPIASEVTAPVVDKANDAGPKADEPSDKNCEKELRRLADLFRSFANRLQSGEEPQSVVADMRQQEKRISAVCPD*
Ga0075435_10111747113300007076Populus RhizosphereKADEPSAKATDAGPKADERNAKNCEKELRRTGDLLRFSVNRIQAGEETQSVVADMRQQGEKVSAVCPELSDR*
Ga0111539_1054262943300009094Populus RhizosphereEEKPPIASEVTAPVVDNKANDAGPKADEPSGKNCEKELLRTADLFRSFINRIQSGEEPQSVVAEMRQQEKRIAAACPD*
Ga0075418_1259199613300009100Populus RhizospherePPIASEVTAPVVDKANDAGPKANEPNAKNCEKELRSTADLLRFSVNRIQAGEETQSIVADMRQQAERVSAVCPEFSDR*
Ga0075423_1050444213300009162Populus RhizosphereVVDKANDAGPQADGYSGKRDSTQNCEKEIRRTADLLRFFANRIQGGEEIQSVVADMRQQEKRIAAVCPN*
Ga0105248_1249328613300009177Switchgrass RhizosphereKAPVKARDAGSQADGSSGKRGLTPDCEKELRSTAELLRIFANRKQEGEEIQSVVGDMRQQEKRIAAACPD*
Ga0105238_1032300943300009551Corn RhizosphereEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0105249_1064589833300009553Switchgrass RhizosphereLEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0126380_10005391113300010043Tropical Forest SoilTPPVVDKANDAGPKADEPSGKNCEKELRHTADLLRFSVNRIQAGEETQSVVADMRQQEKRVSAVCPELSDR*
Ga0126380_1025720213300010043Tropical Forest SoilKANDAGPRPDESSGKQGLTPNCEKELRRTADLLRFFANRTLAGEEIQSVVADVKQQEKRIAAVCPELSDR*
Ga0126380_1113502323300010043Tropical Forest SoilIQAKPPVAMEEKAPVKARDAGSQPVEPSGKRGLTPDCEKELRRTADLLRFFANRIQAGEDTQSVVGDMKQQEKRIAAACPD*
Ga0126380_1150196913300010043Tropical Forest SoilPWFRQEAKPVAVEDKPPVAVEEKTPIVDKANDAGRQADESSGKNCEEELRRTADLFRSFVNRIQSGEEAQSVAADMRQQEKRITAVCPD*
Ga0126384_1224755613300010046Tropical Forest SoilVASEDKAPAAKQDTQGDASPQAVGAVGKPGLTPDCEKELRRTADLLRFFANRIQSGEDTQSVVADMRQHEKKISAACD*
Ga0126382_1023542113300010047Tropical Forest SoilDKAVAKQDRQGDAGPQSVGAADKPGLTQDCEKELRRTADLLRFFANRIQGGEDTQLVVADIRQQEKKISAVCD*
Ga0126370_1189995213300010358Tropical Forest SoilAAMQDKPPVATEEKAPVIDKAKDAAPQADGSSGKLLTPDCEKELRRTADLLRFFANRIQAGEEIQSVVGDMRQQEKRIAAVCPD*
Ga0126377_1030753913300010362Tropical Forest SoilDDETPRRPTADESSGGRDLTQICEKELRRTADLIRFFANRLQMGEESKSVVADMRQQEKKISEVCHD*
Ga0126377_1080644713300010362Tropical Forest SoilAVEEKAPVIDKADKVNNAGLQPDGVSGKQGSTPSCEKEVRRTADLLRFFANRIQAGEETQSVVDDMRRQEKRIAAVCPD*
Ga0126381_10159572123300010376Tropical Forest SoilLVEDKTNDARAQANKPSGKPGLTPNCEKELRRTADLLRFFANRIQTGEKRKSVVADMKQQEKRISAVCSD*
Ga0134126_1212607313300010396Terrestrial SoilKAPLVEDKTNDARAQANEPSGKPGLTPNCEKELRRTADLLRFFANRIQTGEKRKSVVADMRQQEKRISAVCPELTDR*
Ga0126383_1254474913300010398Tropical Forest SoilDKTNDARAQANEPSGKPGLTPNCEKELRRTADLLRFFTNRIQTGEKRKSVVADMRQQEKRISAACPD*
Ga0126383_1309809713300010398Tropical Forest SoilEEKPPVASGVTAPVVDKATDAGRQADEPRGKNCEKELRRTADLFRSFTNRIQSGEETQSVVADMRQQEKRVTAACPD*
Ga0124850_101211263300010863Tropical Forest SoilDKTNDARAQANEPSGKPGLTPNCEKELRRTADLLRFFANRIQTGEKRKSVVADMKQQEKRISAVCSD*
Ga0137376_1012189543300012208Vadose Zone SoilDKPPVAVEEKAPVVDKANDAQPDEASGKQGLTPNCEKELRRTADLIRFFANRIQAGEEIQSVVADMRQQEKRISAVCD*
Ga0126375_1000268473300012948Tropical Forest SoilKAPLVKDKTNDAHAQANEPSGKPGLTPNCEKELRRTADLLRFFANRIQTGEKRKSVVADMKQQEKRISAVCSD*
Ga0126375_1038885233300012948Tropical Forest SoilMEVKPPVAIENNAPAADKAKDAGPQPDESTGKRGLTPNCEQELRRTADLLRFFANRIQAGEEMEPIVADMRRQEKRISAVCPD*
Ga0126369_1064864323300012971Tropical Forest SoilQANEPSGKPGLTPNCEKELRRTADLLRFFTNRIQTGEKRKSVVADMRQQEKRISAACPD*
Ga0126369_1108522013300012971Tropical Forest SoilNEPSGKPGLTPNCEKELRRTADLLRFFANRIQTGEKRKSVVADMKQQEKRISAVCSD*
Ga0164307_1038063913300012987SoilEKAPAAKDDKAGAAGPQTDDNRKPALAPGCENELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0157378_1244090213300013297Miscanthus RhizosphereATKANPPLVEGKVNDARPKPDDDASGKPGLSPGCEKELRRTADLLRFFGNRIQAGEETPSVVADMRQQEKRISAVCPELTDR*
Ga0163163_1000448813300014325Switchgrass RhizosphereDKTPVAKVEPAPIAQPEKKPDAAPAQPADAGKPGATPDCDKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD*
Ga0163163_1173055113300014325Switchgrass RhizosphereANDAVPKADERNAENCEKELQHSADLLKSSINRIQAGEETRSIVADMKQHAERVSKVCPD
Ga0157377_1146970713300014745Miscanthus RhizosphereVNDARPKPDDDASGKPGLSPGCEKELRRTADLLRFFGNRIQAGEETPSVVADMRQQEKRISAVCPELTDR*
Ga0157379_1034581943300014968Switchgrass RhizospherePVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0157379_1129469513300014968Switchgrass RhizosphereSVKNPPVASEVTPPVVDKANDAVPKADERNAENCEKELQHSADLLKSSINRIQAGEETRSIVADMKQQAERVSKVCPD*
Ga0132255_10581036113300015374Arabidopsis RhizosphereDKPDAARPQADDDGKPGATPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0163161_1138310723300017792Switchgrass RhizosphereKTNDAGPKADERNAKNCEKELRRTGDLLRFSVNRIQAGEETQSVVADMRQQEKRVSAACPELSDR
Ga0184635_1006442133300018072Groundwater SedimentKEDKAPVVDKADDAGPQADESGGKRGLTPNCEKELRRTADLLRFFANRIQAGEETESVVADMRRQEKRISAVCE
Ga0193715_102606443300019878SoilPTVAIEAKAPLVEDKANDARAQADESSGKPGLTPNCEKELRRTPDLLRFFANRIQAGEEIQSVVGDMRQQEKRIAAVCPD
Ga0193721_107652413300020018SoilMEDKAPVVDKAGDRGPQRDESSGRQGLTPNCEKELRRTADLIRFFANRIQAGEEIQSVVADMRQQEKRISAVCD
Ga0207680_1106019723300025903Switchgrass RhizospherePEKKPDAAPAQPADAGKPGATPDCDKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD
Ga0207687_1090169423300025927Miscanthus RhizosphereTAPVVDKATDAGPKADEPSAENCEKELRRTADVLRFSANRIQAGKETQSVVADMRQQEKRVSAACPELSDR
Ga0207669_1182559913300025937Miscanthus RhizospherePIAKEDKPAAASPQADDGGKPGATPNCEKELRRTADLLRFFANRIQAGEDTQSVVADMRQQEKKISAACG
Ga0207711_1026289913300025941Switchgrass RhizosphereKPDAAPAQPADAGKPGATPDCDKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD
Ga0207711_1214484413300025941Switchgrass RhizosphereLEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0207651_1210238813300025960Switchgrass RhizosphereRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0208534_100465513300026013Natural And Restored WetlandsPVAKEDKVPVAGEDKTPVANEDSQGETGPQAVGSVAKPGLTPDCEKELRRAASLLRFFANRIQVGEDTQAIVADMRQQEKKISAVCE
Ga0207678_1172845313300026067Corn RhizosphereVAKVEPAPIAQPEKKPDAAPAQPADAGKPGATPDCDKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD
Ga0207441_10094013300026793SoilPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD
Ga0207472_10348013300027427SoilPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD
Ga0209593_1007169213300027743Freshwater SedimentEVTAPVVDKANDAGPKADEPSGKNCETELWRTADLLRSFVNRIQSGEEPQSVVADMRQQEKRIAAACPD
Ga0209465_1009892313300027874Tropical Forest SoilAEAPLADDKVNDARPKPDDASGKPGLTPDCEKELRRTADLLRFFANRIQAGEETQSVVADMRQQEKRISAVCPDEAGR
Ga0209481_1021647613300027880Populus RhizosphereKANDAGPKADEPSDKNCEKELRRLADLFRSFANRLQSGEEPQSVVADMRQQEKRISAVCP
Ga0209382_1026678613300027909Populus RhizosphereNDAGPQANEPSDKNCEKELRRLADLFRSFANRLQSGEEPQSVVADMRQQEKRISAVCPD
Ga0209382_1058915613300027909Populus RhizosphereVEEKPPIASEVTAPVVDNKANDAGPKADEPSGKNCEKELWRTADLFRSFVNRIQSGEEPQSVVADMRQQEKRIAAACPD
Ga0247822_1041127123300028592SoilETAQIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD
Ga0307310_1012596453300028824SoilPVAIEDKPPVAVEEKAPVVDKANDAGPQPDEVSGKRGLTPNCEKELRRTADLLRFFANRIQTGEETQSVVADVTQQEKRIAAVCPD
Ga0307495_1017932413300031199SoilAIEYKPPVAVEEKAPVVDKANDAGRQPDEVSGKQGLTPNCEKELRRTADLLRFFANRIQTGEETQSVVADVNEQEKRIASVCPD
Ga0307496_1010849313300031200SoilKAPVVDKANDAGPQPDEVSGKRGLTPNCEKELRRTADLLRFFANRIQTGEETQSVVADVNEQEKRIASVCPD
Ga0170824_10274518613300031231Forest SoilADDAGPQADESGGKRGLTPNCEKELRRTADLLRFFANRIQAGEETQSVVADMRQQEKRISSVCPD
Ga0170818_10606250313300031474Forest SoilAPVVDKADDAGPQADESGGKRGLTPNCEKELRRTADLLRFFANRIQAGEETQSVVADMRQQEKRISSVCPD
Ga0318516_1062569013300031543SoilPPPVAIEAKAPLVKDKTNDARAQANEPSGKPGLTPNCEKELRRTADLLRFFANRIQTGEKRKSVVADMKQQEKRISAVCSD
Ga0318538_1033650023300031546SoilMQDKPPVATEEKAPVIDKAKDAASQPDGSSGKPGLTPDCEKELRRTADLLRFFANRIQAGEEIQSVVGDMRQQEKKIAAVCPD
Ga0318557_1037442813300031795SoilAKDAASQPDGSSGKPGLTPDCEKELRRTADLLRFFANRIQAGEEIQSVVGDMRQQEKKIAAVCPD
Ga0310892_1003867433300031858SoilKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD
Ga0310885_1008963013300031943SoilPAATEEKAPVKARDAGSQADQSSGKRSLTPDCEKELRRTADLLRFFANRIQAGEEIQSVVGDMRQQEKRIAAACPD
Ga0310902_1085524013300032012SoilTMEDKAPVAKEDKAAVDKAVNAGPQTAIGKRGLTPDCEKELRRTADLLRFFANRIQTGEETQSVVADMRQQEKKISAVCD
Ga0310899_1011790023300032017SoilPVENPPIASEVTAPVVDKATDAGPKADEPSAENCEKELRRTADVLRFSANRIQAGEETQSVVADMRQQEKRVSAACPELSDR
Ga0318553_1024420313300032068SoilEEAKLVAKPPPVAIEAKAPLVKDKTNDARAQANEPSGKPGLTPNCEKELRRTADLLRFFANRIQTGEKRKSVVADMKQQEKRISAVCSD
Ga0318540_1064146823300032094SoilAQANEPSGKPGLTPNCEKELRRTADLLRFFANRIQTGEKRKLVVADMKQQEKRISAVCSD


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