Metagenome Family F090604

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090604
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	145 residues
Representative Sequence	LQAVKEGFRELPYHQPPWLSSPIVASDELLARDRSMLRSFVRAVLKGHLYYGQNPAQAVAVTQKVQRIDSPVVAKQIYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKSKWEP
Number of Associated Samples	91
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	91.67 %
% of genes from short scaffolds (< 2000 bps)	92.59 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.556 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.741 % of family members)
Environment Ontology (ENVO)	Unclassified (25.926 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.444 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.20% β-sheet: 0.00% Coil/Unstructured: 48.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF09084	NMT1	20.37
PF00296	Bac_luciferase	3.70
PF03972	MmgE_PrpD	0.93
PF01314	AFOR_C	0.93
PF02073	Peptidase_M29	0.93
PF13560	HTH_31	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	20.37
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	20.37
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	3.70
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.93
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.93
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
All Organisms	root	All Organisms	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
cellular organisms	root	All Organisms → cellular organisms	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	25.00 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	25.00 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	25.00 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.93 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.93 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	25.00 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.93 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	25.00 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.93 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.93 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	25.00 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	0.93 %
Streptomyces prunicolor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces prunicolor	0.93 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	25.00 %
Flavobacterium columnare	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium columnare	0.93 %
Streptomyces prunicolor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces prunicolor	0.93 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.93 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573002\|GZIGXIF02HATTN	Not Available	506	Open in IMG/M
3300001139\|JGI10220J13317_10349257	Not Available	638	Open in IMG/M
3300002120\|C687J26616_10037027	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M
3300002503\|C687J35164_10255042	Not Available	500	Open in IMG/M
3300005093\|Ga0062594_102796185	Not Available	542	Open in IMG/M
3300005174\|Ga0066680_10088170	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300005295\|Ga0065707_10866779	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium columnare	572	Open in IMG/M
3300005332\|Ga0066388_106469862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces prunicolor	591	Open in IMG/M
3300005332\|Ga0066388_107950557	Not Available	530	Open in IMG/M
3300005340\|Ga0070689_100561338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	985	Open in IMG/M
3300005354\|Ga0070675_100977640	Not Available	777	Open in IMG/M
3300005355\|Ga0070671_100614189	Not Available	940	Open in IMG/M
3300005518\|Ga0070699_101867464	Not Available	550	Open in IMG/M
3300005536\|Ga0070697_101087441	Not Available	712	Open in IMG/M
3300005713\|Ga0066905_100808323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	814	Open in IMG/M
3300005713\|Ga0066905_100954501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	753	Open in IMG/M
3300005713\|Ga0066905_101264485	Not Available	662	Open in IMG/M
3300005713\|Ga0066905_101280880	Not Available	659	Open in IMG/M
3300005713\|Ga0066905_101806643	Not Available	564	Open in IMG/M
3300005718\|Ga0068866_10674530	Not Available	706	Open in IMG/M
3300005719\|Ga0068861_101541040	Not Available	653	Open in IMG/M
3300005764\|Ga0066903_104560329	Not Available	738	Open in IMG/M
3300005764\|Ga0066903_105672292	Not Available	656	Open in IMG/M
3300005843\|Ga0068860_101276391	Not Available	755	Open in IMG/M
3300005881\|Ga0075294_1039840	Not Available	507	Open in IMG/M
3300005981\|Ga0081538_10082651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1701	Open in IMG/M
3300006194\|Ga0075427_10114661	Not Available	509	Open in IMG/M
3300006196\|Ga0075422_10602703	Not Available	509	Open in IMG/M
3300006755\|Ga0079222_10066382	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300006797\|Ga0066659_10272977	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1277	Open in IMG/M
3300006806\|Ga0079220_10168749	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300006844\|Ga0075428_102556643	Not Available	522	Open in IMG/M
3300006847\|Ga0075431_100774135	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300006847\|Ga0075431_100880077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300006854\|Ga0075425_101388369	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300006903\|Ga0075426_10819950	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006904\|Ga0075424_101904014	Not Available	628	Open in IMG/M
3300009094\|Ga0111539_12851290	Not Available	560	Open in IMG/M
3300009100\|Ga0075418_10172832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2300	Open in IMG/M
3300009100\|Ga0075418_10198870	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2134	Open in IMG/M
3300009100\|Ga0075418_10215624	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2043	Open in IMG/M
3300009137\|Ga0066709_101240468	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300009162\|Ga0075423_12059969	Not Available	618	Open in IMG/M
3300009162\|Ga0075423_12083897	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300009168\|Ga0105104_10950279	Not Available	507	Open in IMG/M
3300009553\|Ga0105249_11286663	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300009792\|Ga0126374_10129817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1490	Open in IMG/M
3300009810\|Ga0105088_1075350	Not Available	599	Open in IMG/M
3300009811\|Ga0105084_1072612	Not Available	627	Open in IMG/M
3300009823\|Ga0105078_1015578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	848	Open in IMG/M
3300010360\|Ga0126372_12162837	Not Available	605	Open in IMG/M
3300010362\|Ga0126377_10633762	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1116	Open in IMG/M
3300010366\|Ga0126379_12286856	Not Available	641	Open in IMG/M
3300010401\|Ga0134121_10790019	Not Available	911	Open in IMG/M
3300011119\|Ga0105246_12571660	Not Available	502	Open in IMG/M
3300011437\|Ga0137429_1202438	Not Available	620	Open in IMG/M
3300012038\|Ga0137431_1170533	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300012200\|Ga0137382_10847696	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300012203\|Ga0137399_11434743	Not Available	577	Open in IMG/M
3300012208\|Ga0137376_10055197	All Organisms → cellular organisms → Bacteria	3262	Open in IMG/M
3300012208\|Ga0137376_10987298	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	721	Open in IMG/M
3300012913\|Ga0157298_10221313	Not Available	622	Open in IMG/M
3300012948\|Ga0126375_11822891	Not Available	532	Open in IMG/M
3300012957\|Ga0164303_11492523	Not Available	510	Open in IMG/M
3300012964\|Ga0153916_11099213	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300013306\|Ga0163162_13120311	Not Available	532	Open in IMG/M
3300014868\|Ga0180088_1081352	Not Available	582	Open in IMG/M
3300014877\|Ga0180074_1031189	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1081	Open in IMG/M
3300015245\|Ga0137409_10385528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1216	Open in IMG/M
3300015264\|Ga0137403_10125469	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2555	Open in IMG/M
3300015371\|Ga0132258_10509487	All Organisms → cellular organisms → Bacteria	3011	Open in IMG/M
3300015372\|Ga0132256_101484416	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300015374\|Ga0132255_104172181	Not Available	613	Open in IMG/M
3300018000\|Ga0184604_10188259	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	701	Open in IMG/M
3300018061\|Ga0184619_10523254	Not Available	521	Open in IMG/M
3300018072\|Ga0184635_10335785	Not Available	584	Open in IMG/M
3300018078\|Ga0184612_10081824	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1686	Open in IMG/M
3300018081\|Ga0184625_10288162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	859	Open in IMG/M
3300018081\|Ga0184625_10299689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	840	Open in IMG/M
3300018084\|Ga0184629_10168480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1119	Open in IMG/M
3300018422\|Ga0190265_11974112	Not Available	689	Open in IMG/M
3300018422\|Ga0190265_12810032	Not Available	582	Open in IMG/M
3300018469\|Ga0190270_12140444	Not Available	619	Open in IMG/M
3300021560\|Ga0126371_10961505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	997	Open in IMG/M
3300025159\|Ga0209619_10309464	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300025159\|Ga0209619_10627322	Not Available	509	Open in IMG/M
3300025324\|Ga0209640_10232588	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300025899\|Ga0207642_10864691	Not Available	578	Open in IMG/M
3300025904\|Ga0207647_10467814	Not Available	705	Open in IMG/M
3300025917\|Ga0207660_10837678	Not Available	751	Open in IMG/M
3300025917\|Ga0207660_11365965	Not Available	574	Open in IMG/M
3300025926\|Ga0207659_10840833	Not Available	789	Open in IMG/M
3300025972\|Ga0207668_11034756	Not Available	735	Open in IMG/M
3300027209\|Ga0209875_1020808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	776	Open in IMG/M
3300027577\|Ga0209874_1141024	Not Available	548	Open in IMG/M
3300027873\|Ga0209814_10025852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2402	Open in IMG/M
3300027874\|Ga0209465_10100332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1419	Open in IMG/M
3300027909\|Ga0209382_11209798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	772	Open in IMG/M
3300027909\|Ga0209382_11380082	Not Available	709	Open in IMG/M
3300028803\|Ga0307281_10163137	Not Available	787	Open in IMG/M
3300031740\|Ga0307468_101193567	Not Available	685	Open in IMG/M
3300033407\|Ga0214472_10394796	Not Available	1300	Open in IMG/M
3300033417\|Ga0214471_11008360	Not Available	640	Open in IMG/M
3300034113\|Ga0364937_089306	Not Available	619	Open in IMG/M
3300034115\|Ga0364945_0012248	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2208	Open in IMG/M
3300034115\|Ga0364945_0272154	Not Available	525	Open in IMG/M
3300034147\|Ga0364925_0421247	Not Available	507	Open in IMG/M
3300034354\|Ga0364943_0022970	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1944	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.44%
Host-Associated	Host-Associated	30.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.41%
Plants	Host-Associated → Plants	30.56%
Aquatic	Environmental → Aquatic	12.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.22%
Sediment	Environmental → Aquatic → Sediment	10.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.41%
Floodplain	Environmental → Terrestrial → Floodplain	4.63%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Roots	Host-Associated → Plants → Roots	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.59%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.56%
Sand	Environmental → Terrestrial → Soil → Sand	4.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	4.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.63%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.63%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	4.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.78%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.56%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.63%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	4.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.93%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.93%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002503	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005881	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_202	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014868	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10D	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE1_05923760	2189573002	Grass Soil	PIVAGDELLARDRSMLHSLLRAIEKGHLYYGQNGTAAVAFIQKFQRIENRNTAKQIYDDDMLRHNPGGGLEDAAMRKAVERSREMLKVQRKVELSEIFDLSVAKEAEAELKKSKWEP
JGI10220J13317_103492571	3300001139	Soil	VKGALVSSTQALAALKDGFRELRYDQPPWMSSPIVAGDDLLSRERPMLRSFIKAVTKGHIYYGQYAAQAIALAQKVQRISSQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP*
C687J26616_100370273	3300002120	Soil	KAALLASTQGLQAVKEGFRELPYHQPPWLSSPVVASDELLARERPMLRALVRSIEKGHIFYGQNPAAAIALIQKVQRIENRAVAKQIYDDDMLRHNPGGGLDEPSMRRVVERAREMLKVQKNVEPSEVFDLSLAKEAEAELKKMKWEP*
C687J35164_102550421	3300002503	Soil	LASTQGLQAVKEGFRELPYHQPPWLSSPVVASDELLARERPMLRALVRSIEKGHIFYGQNPAAAIALIQKVQRIENRAVAKQIYDDDMLRHNPGGGLDEPSMRRVVERAREMLKVQKNVEPSEVFDLSLAKEAEAELKKMKWEP*
Ga0062594_1027961851	3300005093	Soil	QPPWMSSPIVAGDDLLSRERPMLRSFIKAVTKGHIYYGHYPAQAIVLAQKVQRIASQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP*
Ga0066680_100881702	3300005174	Soil	HQPPWLSSPIVASDELLSRERPMLRSLLRAIEKGHLYYGQNATAAIALIQKVQRIENRETAKQIYDDDMLQHNPGGGLEETSMKRVVERAREMLKVQRHVEPGEVFDLTLAKEVEVELKKTKWEP*
Ga0065707_108667791	3300005295	Switchgrass Rhizosphere	SDELLSRERPMLRSLLRAIEKGHLYYGQNGTAAIALIQKVQRIENRETAKQIYDDDMLRHNPGGGLEDAAMRKVVERSREMLKVQRKVELNEIFDLSMAKEAEAELKKAKWEP*
Ga0066388_1064698621	3300005332	Tropical Forest Soil	YASLKAGTVRAALLASTQGLQAVKEGFRELPYHQPPWLSSPIVASDDFMTRDRAMLRAFLRAVIKGHLYYGQYPAQAIALTQKVQRIENPVVAKQIYDDDMLRHNPGGGLEDASMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKRAKWEP*
Ga0066388_1079505571	3300005332	Tropical Forest Soil	WLSSPIVASDELMTRDRAMLRAFLRAVIKGHFYYGQYPGQAIALTQKVQRIENPVVAKQIYDDDMLRHNPGGGLEDAFMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKRAKWEP*
Ga0070689_1005613382	3300005340	Switchgrass Rhizosphere	LVSSTQALAALKDGFRELRYDQPPWMSSPIVAGDDLLSRERPMLRSFIKAVTKGHIYYGQYAAQAIALAQKVQRISSQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP*
Ga0070675_1009776401	3300005354	Miscanthus Rhizosphere	MLTREIFEQNNLQPNKEVAMLQLGTPDLRYGALKAGTVKGALVSSTQAIAARRDGFRELPYQQPPWMSSPIVAGDDLLAKERPMLRPFIKAVAKGHIYYGRYPAQAIALTQKIQRISDSSIAKQIYDDDMLRQNPGGGMDEAAQRKVVERAREMFKVQNKVELSEMFDLSLAREVEAELKKAKWEP*
Ga0070671_1006141891	3300005355	Switchgrass Rhizosphere	NNLQPNKEVAMLQLGTPDLRYGALKAGTVKGALVSSTQAIAARRDGFRELPYQQPPWMSSPIVAGDDLLAKERPMLRAFIKAVAKGHIYYGRYPAQAIALTQKIQRISDSSIAKQIYDDDMLRQNPGGGMDEAAQRKVVERAREMFKVQNKVELSEMFDLSLAREVEAELKKAKWEP*
Ga0070699_1018674641	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	IVAGDDLLSRERPMLRSFIKAVTKGHIYYGQYAAQAIALAQKVQRISSQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP*
Ga0070697_1010874411	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	DVAMLQLGTPDLRYGALKAGAVKGALVSSTQALAALKDGFRELRYDQPPWMSSPIVAGDDLLSRERPMLRSFIKAVTKGHIYYGQYAAQAIALAQKVQRISSQSMAKQVYEDDVLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP*
Ga0066905_1008083231	3300005713	Tropical Forest Soil	TPDVRYAALKAGKVKAALLASTQGLQAVQEGFRELPYQQPPWLSSPVVASDDLLSRERPMLRSLLRAIEKGHLYYGQNPGAAIELIRKVQRIENRAVARQIYDDDMLRHNPGGGLEEASMKRVVERAREMLKVQKNVDPREVFDLSLAKEVETEIRKTK*
Ga0066905_1009545011	3300005713	Tropical Forest Soil	ASTQGLQAVKEGFRELPYHQPPWLSSPIVASDELMTRDRAMLRAFLRAVIKGHLYYGQYLAQAIALTQKIQRIENPVVAKQIYDDDMLRHNPGGGLEDAAMRKVVERSREMLKVQRKVKLSEIFDLSLAKEAEAEVKRAKWES*
Ga0066905_1012644852	3300005713	Tropical Forest Soil	FRELPYHQPPWLSSPIVASDELMTRDRAMLRAFLRAVIKGHFYYGQHPAQAIALTQKVQRIDNPVVAKQIYDDDMLRHNPGGGLEDASMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKRAKWEP*
Ga0066905_1012808801	3300005713	Tropical Forest Soil	LQIGTPDVRYASLKAGTVRAALLASTQGLQAVKEGFRELPYHQPPWLSSPIVASDELMTRDRAMLRAFLRAVIKGHFYYGQYPGQAIALTQKVQRIENPVVAKQIYDDDMLRHNPGGGLEDAFMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKRAKWEP*
Ga0066905_1018066431	3300005713	Tropical Forest Soil	TQALTGLRDGFRELPYHQPPWLSSPIVASDELLARERAMLRGFLRAVIKGHLYYGHYPSQGIALTQKVQRIDGQAMGKEIYDDDMLRHNPGGGLEESAMRKVVERSREMLKVQRMVELVDIFDLSMAKEAEAELKKAKWEP*
Ga0068866_106745302	3300005718	Miscanthus Rhizosphere	YGALKAGTVKGALVSSTQAIAARRDGFRELPYQQPPWMSSPIVAGDDLLAKERPMLRAFIKAVAKGHIYYGRYPAQAIALTQKIQRISDSSIAKQIYDDDMLRQNPGGGMDEAAQRKVVERAREMFKVQNKVELSEMFDLSLAREVEAELKKAKWEP*
Ga0068861_1015410402	3300005719	Switchgrass Rhizosphere	DDLLSRERPMLRSFIKAVTKGHIYYGQYAAQAIALAQKVQRISSQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSDIFDLSMAKEVEAELKKSKWEP*
Ga0066903_1045603291	3300005764	Tropical Forest Soil	QIGTPDVRYASLKAGTVRAALLASTQGLQAVKEGFRELPYHQPPWLSSPIVASDELMTRDRAMLRAFLRAVIKGHFYYGQYPGQAIALTQKVQRIENPVVAKQIYDDDMRRHNPGGGLEDAFMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKRAKWEP*
Ga0066903_1056722922	3300005764	Tropical Forest Soil	HQPPWLSSPIVASDELMTRDRAMLRAFLRAVIKGHLYYGQYPAQTIALTQKVQRIEHPVVAKQIYDDDMLRHNPGGGLEDASMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKRAKWEP*
Ga0068860_1012763911	3300005843	Switchgrass Rhizosphere	LAALKDGFRELRYDQPPWMSSPIVAGDDLLSRERPMLRSFIKAVTKGHIYYGQYAAQAIALAQKVQRISSQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP*
Ga0075294_10398401	3300005881	Rice Paddy Soil	GFRELPYKQPPWISSPITASDDLLARERPMVRALLRAMEKGHIFYGQNPTAAIALTQKVQRVDDRAVAKQIYDDDMLRHNPGGQLEEPSMKRVIERAKEMLKVQRNVEINEVFDLSLAREAEADLKRAKWEP*
Ga0081538_100826513	3300005981	Tabebuia Heterophylla Rhizosphere	PIVASDGLSARERAMLRGFLWAVIKGHLYYGNYPSQGIALTQKVQRIDSQAMAKQIYDDDMLRHNPGGGLEEAAMRKVVERSREMLKVPRKVELAEIFDLSMAKEAEAEVKKTKWEP*
Ga0075427_101146611	3300006194	Populus Rhizosphere	VLLQIGTPDVRYASLKAGTVRAALLASTHGLQAVKEGFRELPYQQPPWLSSPIVASDELLSRDRPMLRSLLRAIEKGHLYYGKNGTAAIALVQKVQRIENRETAKQIYEDNMLRHNPGGGLEDEAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKSKWEP*
Ga0075422_106027032	3300006196	Populus Rhizosphere	LSKERAMLRAFIKGMTKGHIYYGQNPARAIALTQKIQRIENQSLAKQIYDDDMLRQNPGGGLDEAAQRKVVERARETFKVQNKVELSEIFDLSMAKEVEAELKKIKWEP*
Ga0079222_100663822	3300006755	Agricultural Soil	MSSPIVAGDDLLAQERPMLRAFIKAVTKGHIYYGRYRAQAIALTQKLQRITDPNIAKQIYDDDMLRQNPGGGMDEAAQRKVVERARAMFKVQNKVELSEIFDLGLAREVEADLKKSKWEP
Ga0066659_102729771	3300006797	Soil	QGLLAVKEGFRELPYQQPPWLSSPIVASDELLSRDRPMLRYLLRAIEKGHLYYGQNGTAAIALVQKVQRIENRETAKQIYDDDMLRHNPGGGLEDEAMRKVVERAREMLKVQRKVELSEIFDLSMAKEGEAELKKAKWEP*
Ga0079220_101687491	3300006806	Agricultural Soil	GALNDGMLSGVLVALTQAIAARRDGFLELPYRQPPRTSSPIVAGDDLLAQERPMLRAFIKAVTKGHIYYGRYRAQAIALTQKVQRITDPNIAKQIYDDDMLRQNPGGGMDEAAQRKVVERARAMFKVQNKVELSEIFDLGLAREVEAELKKIKWEP*
Ga0075428_1025566431	3300006844	Populus Rhizosphere	RELPYQQPPWMSSPIAAGDDLLGKEQPMLRGFIKAVSKGHIYYGRHPAQAIELTQKIQRIADASIAKQIYDDDMLRQNPGGGMDEAAQRKVVERAREMFKVQNKVELSEIFDLNIAREVDAELKKSKWEP*
Ga0075431_1007741351	3300006847	Populus Rhizosphere	IVAGDDLLSKERAMLRAFIKGMTKGHIYYGQNPARAIALTQKIQRIENQSLAKQIYDDDMLRQNPGGGLDEAAQRKVVERARETFKVQNKVELSEIFDLSMAKEVDAELKRSKWEP*
Ga0075431_1008800773	3300006847	Populus Rhizosphere	QQPPWMSSPIAAGDDLLGKERPMLRGFIKAVSKGHIYYARHPAQAIELTQKIQRIADASIAKQIYDDDMLRQNPGGGMDEAAQRKVVERAREMFKVQNKVELSEIFDLNIAREVDAELKKSKWEP*
Ga0075425_1013883691	3300006854	Populus Rhizosphere	AGTVRAALLASTQGLQAVKEGFRELPYHQPPWLSSPIVASDELLARDRMMLRGLVRAIEKGHIYYGKNPEVAIELIRKIQRIDNRAVAKQIYDDDMTRHNPGGGLEEASMRRVVERAREMLKVQKHVEPGEVFDLSLAREVDAELKKIKWEP*
Ga0075426_108199502	3300006903	Populus Rhizosphere	STQAITARRDGFRELPYHQPPWMSSPIVAGDDLLSKERAMLRAFIKAVAKGHIYYGRHPAHAIALTQKIQRIADPNIAKQIYDDDMLRQNPGGGMDEVAQRKVVERAREMFKVQSKVELSEIFDLSLAREVEAELKKAKWEP*
Ga0075424_1019040141	3300006904	Populus Rhizosphere	EILEQHAMNPAKDLVLLQIGTPDVRYSALKAGSVKAALLASTQGLQAIKEGFRELPYQQPPWLSSPIVAGDDSLVRDRTMLRSFLRGVIKGHIYYRENPAAALAAIQKVQRIESAAVAKQIYDDDMSRYNPGGGLEEASMRRVIERSKEMSKVHGNVELNEIFNLSLAKEAEAEVKKTKWER*
Ga0111539_128512902	3300009094	Populus Rhizosphere	YDSLARDRAMLRSFLRGLIKGHIYYGESPAAALAAIQKIQRIESAAVAKQIYDDDMSRYNPGGGLEEASMRRVIERSKEMSKVHGNVELNEIFNLSLAKEAETEVKKTKWER*
Ga0075418_101728322	3300009100	Populus Rhizosphere	MRYGALKGGAVKGALVSSTQALTALKDGFRELRYEQPPWMSSPIVAGDDLLSKERAMLRAFIKGMTKGHIYYGQNPARAIALTQKIQRIENQSLAKQIYDDDMLRQNPGGGLDEAAQRKVVERARETFKVQNKVELSEIFDLSMAKEVDAELKRSKWEP*
Ga0075418_101988701	3300009100	Populus Rhizosphere	KAGTVKAALVSSTQALTGLRDGFRELPYHQPPWLSSPIVASDELLARERAMLRGFLRAVIKGHLYYGHYPSQGIALTQKVQRIDGQAMGKQIYDDDMLRHNPGGGLEESAMRKVVERSREMLKVQRKVELVDIFDLSMAKEAEAELKKAKWEP*
Ga0075418_102156243	3300009100	Populus Rhizosphere	QALAALKDGFRELRYDQPPWMSSPIVAGDDLLSRERPMLRFFIKAVTKGHIYYGQYPAQAIALAQKVQRISSQSMAKQVYDDDMLRHNPGGGLDEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKIKWEP*
Ga0066709_1012404681	3300009137	Grasslands Soil	GGLTDMLTREILEQHGINAAKDVVLLQIGTPDVRYASLKAGTVRAALLASTQGLLAVKEGFRELPYHQPPWLSSPIVASDELLSRERPMLRSLLRAIEKGHLYYGQNATAAIALIQKVQRIENRETAKQIYDDDMLRHNPGGGLEETSMKRVVERAREMLKVQRHVEPGEVFDLTLAKEVEVELKKTKWEP*
Ga0075423_120599691	3300009162	Populus Rhizosphere	LLASTQGLQAIKEGFRELPYQQPPWLSSPIVAGDDSLVRDRTMLRSFLRGVIKGYIYYRENPAAALAAIQKIQRIDSAAVAKQIYDDDMARYNPGGGLEEASMRRVIERSKEMSKVHGNVELNEIFNLSLAKEAETEVKKTKWER*
Ga0075423_120838972	3300009162	Populus Rhizosphere	AAGDDLLGKERPMLRGFIKAVSKGHIYYGRHPAQAIELTQKIQRIADASIAKQIYDDDMLRQNPGGGMDEAAQRKVVERAREMFKVQNKVELSEIFDLNIAREVDAELKKSKWEP*
Ga0105104_109502791	3300009168	Freshwater Sediment	LRDGFRELRYEQPPWLSSPIVAGDELLTRDRSMLRSLLRAVLKGHLYYGQHPSQAVALTQKVQRIDSQAMAKQIYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVERKVELNEIFDLSMAKEAEAEL*
Ga0105249_112866632	3300009553	Switchgrass Rhizosphere	DSLARDRAMLRLFLRGLIKGHIYYGESPTAALAAIQKIQRIESAAVAKQIYDDDMSRYNPGGGLEEASMRRVIERSKEMSKVHGNVELNEIFNLSLAKEAEAEVKKTKWER*
Ga0126374_101298172	3300009792	Tropical Forest Soil	STQGLQAVKEGFRELPYHQPPWLSSPIVASDELMTRDRAMLRAFLRAVIKGHLYYGQYPAQAIALTQKVQRIDDPVVAKQIYDDDMLRHNPGGGLEDASMRKVVERSREMLKVQRKVELGEIFDLSLAKEAEAGVKKAKWEP*
Ga0105088_10753501	3300009810	Groundwater Sand	IVAGDELLTRDRSMLRSFLGAVLKGHLYYGQHPVQAVALTQKVQRIDSQSMAKQIYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVERKVELNEIFDLSMAKEAEAELKKSKWEP*
Ga0105084_10726121	3300009811	Groundwater Sand	STQALIALRDGFRELRYDQPPWLSSPIVAGDELLTRDRSMLRSFLRAVLKGHLYYGQHPSQAVGLTQKVQRIDSQAMAKQIYEDDMLRHNPGGGLEEVAMRKVVERSREMLKVERKVELNEIFDLSMAKEAEAELKKSKWEP*
Ga0105078_10155782	3300009823	Groundwater Sand	DGFRELRYDQPPWLSSPIVAGDELLTRDRSMLRSFLRAVLKGHLYYGQHPSQAVPLTQKVQRIDSQVMAKQIYEDDMLRHNPGGGLEEVAMRKVVERSREMLKVERKVELNEIFDLSMAKETEAELKKSKWKP*
Ga0126372_121628371	3300010360	Tropical Forest Soil	PIVASDELMTRDRAMLRAFLRAVVKGHLYYGQYPAQAVALTQKVQRIDDPVVAKQIYDDDMLRHNPGGGLEDASMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKKAKWEP*
Ga0126377_106337621	3300010362	Tropical Forest Soil	TQGLQAVKEGFRELPYHQPPWLSSPIVASDDFMTRDRAMLRAFLRAVIKGHLYYGQYPAQAIALTQKVQRIENPVVAKQIYDDDMLRHNPGGGLEDASMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKRTKWEP*
Ga0126379_122868562	3300010366	Tropical Forest Soil	VRYASLKAGTVRAALLASTQGLQAVKEGFRELPYNQPPWLSSPIVASDELMTRDRAMLRAFLRAVIKGHFYYGQYPAQAIALTQKVQRIENPVVAKQIYDDDMLRHNPGGGLEDAFMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKRAKWEP*
Ga0134121_107900192	3300010401	Terrestrial Soil	EIFEQNNLQPNKEVAMLQLGTPDLRYGALKAGTVKGALVSSTQAIAARRDGFRELPYQQPPWMSSPIVAGDDLLAKERPMLRAFIKAVAKGHIYYGRYPAQAIALTQKIQRISDSSIAKQIYDDDMLRQNPGGGMDEAAQRKVVERAREMFKVQNKVELSEMFDLSLAREVEAELKKAKWEP*
Ga0105246_125716601	3300011119	Miscanthus Rhizosphere	HGIQPNKDVAMLQLGTPDLRYGALKAGAVKGALVSSTQALAALKDGFRELRYDQPPWMSSPIVAGDDLLSRERPMLRSFIKAVTKGHIYYGQYAAQAIALAQKVQRISSQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVE
Ga0137429_12024381	3300011437	Soil	PHKEVALLQLGTPDLRYGALKAGTVKAALVSSTQALTALKEGFRELRYDQPPWLSSPIVASDELLGRDRAMLRGFLRGVLKGHLYYGQQPAQAIAITQKVQRIENQAMAKQIYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKAKWEP*
Ga0137431_11705332	3300012038	Soil	WLSSPIVASDELLARDRAMLRGFLRAVLKGHLYYGQQPAQAIAITQKVQRIENQAMAKQIYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKAKWEP*
Ga0137382_108476962	3300012200	Vadose Zone Soil	PPWLSSPIVASDELLARDRLMLRGLVRAIEKGHIYYGKNPEVAIELIRKIQRIDNRAVAKQIYDDDMTRHNPGGGLEEASMRRVVERAREMLKVQKQVEPGEVFDLSLSREVDAELKKIKWEP*
Ga0137399_114347431	3300012203	Vadose Zone Soil	GINAAKDVVLLQIGTPDVRYASLKAGTVRAALLASTQGLLAVKEGFRELPYHQPPWLSSPIVASDELLSRERPMLRSLLRAIEKGHLYYGQNATAAIALIQKVQRIENRETAKQIYDDDMLRHNPGGGLEETSMKRVVERAREMLKVQRHVEPGEVFDLTLAKEVEVELKKTKWEP*
Ga0137376_100551974	3300012208	Vadose Zone Soil	ALKAGTVRAALLASTQGLQAVKEGFRELPYHQPPWLSSPIVASDELLARDRLMLRGLVRAIEKGHIYYGKNPEVAIELIRKIQRIDNRAVAKQIYDDDMTRHNPGGGLEEASMRRVVERAREMLKVQKQVEPGEVFDLSLSREVDAELKKIKWEP*
Ga0137376_109872981	3300012208	Vadose Zone Soil	EGFRELPYQQPPWLSSPIVASDELLSRDRPMLRYLLRAIEKGHLYYGQNGTAAIALVQKVQRIENRETAKQIYDDDMLRHNPGGGLEDEAMRKVVERAREMLKVQRKVELSEIFDLSMAKEGEAELKKAKWEP*
Ga0157298_102213131	3300012913	Soil	MLRSFIKAVTKGHIYYGQYAAQAIALAQKVQRISSQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP*
Ga0126375_118228911	3300012948	Tropical Forest Soil	TPDVRYASLKAGTVRAALLASTQGLQAVKEGFRELPYHQPPWLSSPIVASDELMTRDRAMLRAFLRAVIKGHFYYGQYPGQAIALTQKVQRIENPVVAKQIYDDDMRRHNPGGGLEDAFMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKRAKWEP*
Ga0164303_114925231	3300012957	Soil	SALKAGSVKAALLASTQGLQAIKEGFRELPYQQPPWLSSPIVAGDDSLARDRAMLRSFLRGVIKGHIYYGESPAAALAAIQKIQRIESAAVAKQIYDDDMSRYNPGGGLEEASMRRVIERSKEMSKVQGNVDLNEIFNLSLAKEAEAEVKKTKWER*
Ga0153916_110992131	3300012964	Freshwater Wetlands	VLLQIGTPDVRYAALKAGTVKAALLASTGALQAVKEGFRELPYKQPPWISSPITASDDLLARERPMVRALLRAMEKGHIFYGQNPTAAIALIQKVQRVDDRAVAKQIYDDDMLRHNPGGQLEEPSMKRVIERAKEMLKVQRNVEVSEVFDLSLAREAEADLKKAKWEP*
Ga0163162_131203111	3300013306	Switchgrass Rhizosphere	ILEQHAMNPAKDVVLLQIGTPDVRYSALKAGSVKAALLASTQGLQAIKEGFRELPYQQPPWLSSPIVAGDDSLARDLAMLRSFLRGLIKGHIYYRENPAAALAAIQKIQRIDSAAVAKQIYDDDMSRYNPGGGLEEASMRRVIERSKEMSKVHGNVELNEIFNLSLAKEAEAEVKKT
Ga0180088_10813521	3300014868	Soil	PHKDVALLQLGTPDLRYGALKAGTVKAALVSSTQALTALKDGFRELRYDQPPWLSSPLVAGDDILTRERAMFRSFLRAVTKGHLYYGHHPAQAIALTQKVQRIDSPILAKQIYDDDMLRHNPGGGLEEAAMRKVVERAREMLKVQNKVELGEIFDLSIVREVEAELKKIKWEP*
Ga0180074_10311892	3300014877	Soil	LLSSTGGLQALQEGYRELPYQQPPWLSSPITAGDDLLARYRGTLRGILRAAQKGHLYYGKNPAGAIELIRKVQRIESRALAKQIYDDDMQRHNPTGGLEESSMRRVTERARAMLKVQRPVDNHEVFDLSLAKEVEEELKRLKWEP*
Ga0137409_103855281	3300015245	Vadose Zone Soil	TGCSLCIIESWNRQSCAPCVNPRLASRKEGFRELPYQQPPWLSSPIVASDELLSRDRPMLRSLLRAIEKGHLYYGQNGTAAIALVQKVQRIENRETAKQIYDDDMLRHNPGGGLEDEAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKAKWEP*
Ga0137403_101254691	3300015264	Vadose Zone Soil	DVVLLQIGTPDVRYASLKAGTVRAALLASTQGLQAVKEGFRELPYQQPPWLSSPIVASDELLSRDRPMLRYLLRAIEKGHLYYGQNGTAAIALVQKVQRIENRETAKQIYDDDMLRHNPGGGLEDEAMRKVVERSREMLKVQRKVELSEIFDLSMAKEGEAELKKAKWEP*
Ga0132258_105094874	3300015371	Arabidopsis Rhizosphere	LLAKEPPMLRAYIKAVTKGHMYYGRYPTQAIALTQKVQRITDPNIAKQIYDDDMLRQNPGGGMDEAAQRKVVERARAMFKVQNKVELSEIFDLGLAREVEAELKKIKWEP*
Ga0132256_1014844161	3300015372	Arabidopsis Rhizosphere	RRDGFRELPYQQPPWMSSPIVAGDDLLAKERPMLRAFIKAVTKGHIYYGRYRTQAIALTQKVQRITDPNIAKEIYDDDMLRQNPGGGMDEAAQRKVVERARAMFKVQNKVELSEIFDLGLAREVEAELKKIKWEP*
Ga0132255_1041721811	3300015374	Arabidopsis Rhizosphere	VKHSLKREKSKSARPAQAVTKGHIYYGRYPTRAIALTQKVQRITDPNIAKEIYDDDMLRQNPGGGMDEAAQRKVVERARAMFKVQNKVELSEIFDLGLAREVEAELRKIKWEP*
Ga0184604_101882591	3300018000	Groundwater Sediment	QPPWMSSPIVAGDDLLSRERPMLRSFIKAVTKGHIYYGQYAAQAIALAQKVQRIASQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELGEIFDLSMAKEVEAELRKNKWEP
Ga0184619_105232542	3300018061	Groundwater Sediment	WLSSPIVAGDELLTRDRSMLRSLFRAVLKGHLYYGQHPSQAVALTQKVQRIDSQLMAKQIYEDDMLRHNPGGGLEEAAMRKVVERSRDMLKVERRVELNEIFDLSMAKEAEAELTKAKWE
Ga0184635_103357851	3300018072	Groundwater Sediment	AGTVRAALLASTQSLQAVKEGFRGLPYHQPPWLSSPIVAGDELLSRERLMLRSLLRAIEKGHLYYGQNGTAAIALLQKLQRIENRETAKQIYDDDMLRHNPGGGLEEAAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKSKWEP
Ga0184612_100818241	3300018078	Groundwater Sediment	MLTREILEQHGINPTKDVVLLQIGTPDVRYASLKAGTVRAALLASTQGLQAVKEGFRELPYHQPPWLSSPIVAGDELLARDRSMLRSLLRAIEKGHLYYGQNGTAAIALLQKLQRIENRETAKQIYDDDMLRHNPGGGLEEAAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKSKWEP
Ga0184625_102881621	3300018081	Groundwater Sediment	QIGTPDVRYASLKAGTVRAALLASTQGLQAVKEGFRELPYQQPPWLSSPIVAGDELLARDRSMLRSLLRAIEKGHLYYGQNGTAAIALLQKLQRIENRETAKQIYDDDMLRHNPGGGLEEAAMRKVVERSREMLKVQRKVELNEIFDLSMAKEAEAELKKSKWEP
Ga0184625_102996891	3300018081	Groundwater Sediment	DQPPWLSSPIVAGDELLTRDRSMLRSLLRAVLKGHLYYGQHPSQAVALTQKVQRIDSQLMAKQIYEDDMLRHNPGGGLEEAAMRKVVERSRDMLKVERRVELNEIFDLSMAKEAEAELTKAKWEP
Ga0184629_101684801	3300018084	Groundwater Sediment	KAGVVKAALLSSTGGLQALQEGYRELPYHQPPWLSSPITVSEDLLARERATLRGFLRAAQKGHLYYGKYPAVAMELIRKVQRIENRALAKQIYDDDMSRHNPSGSLEEASMRKVTERARDMLKVQRSVDINEVFDLSLAREVEADLKKTKWEP
Ga0190265_119741121	3300018422	Soil	EILEQHGIQPNKDVAMLQLGTPDLRYGALKAGAVKGALVSSTQALAALKDGFRELRYEQPPWMSSPIVAGDDLLSRERPMLRSFIKAVVKGHIYYGQYAAQAIALAQKVQRISSQSMAKQVYEDDMLRHNPGGGLDEAAMRKVVERSREMLKVQNKVELNEIFDLSMAKEAEAELKKSKWEP
Ga0190265_128100322	3300018422	Soil	ALVSSTQALIGLKDGFRELRYDQPPWLSSPIVAGDDLLNRDRAMLRSFLRAVTKGHYYYGDHPAQAIGLTQKVQRIDSQQMAKQIYDDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMVREVEADLKKIKWEP
Ga0190270_121404441	3300018469	Soil	PNKDVAMLQLGTPDLRYGALKAGAVKGALVSSTQALAALKDGFRELRYDQPPWMSSPIVAGDDLLSRERPMLRSFIKAVTKGHIYYGHYPAQAIVLAQKVQRIASQSMAKQVYEDDMLRHNPGGGLDEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP
Ga0126371_109615052	3300021560	Tropical Forest Soil	YASLKAGTVRAALLASTQGLQAVKEGFRELPYHQPPWLSSPIVASDEFMTRDRAMLRAFLRAVIKGHLYYGQYPAQAVALTQKVQRIENPVVAKQIYDDDMLRHNPGGGLEDASMRKVVERSREMLKVQRKVELGEIFDLSLAKEAEAEVKKAKWEP
Ga0209619_103094642	3300025159	Soil	RPPWLSSPVVASDELLARDRPMLRSLVRAMEKGHIFYGKNPAVALDLIRKAQRIESRAVAQQIYDDDMLRHNPGGGLEDVSMRRVVERAREMLKVQRHVAVSEVFDLSLAKEADMDLKKMKWEP
Ga0209619_106273221	3300025159	Soil	LKTGAVKAALLASTQGLQAVKEGFRELPYHQPPWLSSPVVASDELLARERPMLRALVRSIEKGHIFYGQNPAAAIALIQKVQRIENRAVAKQIYDDDMLRHNPGGGLDEPSMRRVVERAREMLKVQKNVEPSEVFDLSLAKEAEAELKKMKWEP
Ga0209640_102325881	3300025324	Soil	KDVVLLQIGTPDVRYSSLKAGAVKAALLASTQGLQAVKEGFRELPYHQPPWLSSPVVAGDELLARERPMLRALVRSIEKGHIFYGQNPAAAIALIQKVQRIENRAVAKQIYDDDMLRHNPGGGLDEPSMRRVVERAREMLKVQKNVEPSEVFDLSLAKEAEAELKKMKWEP
Ga0207642_108646911	3300025899	Miscanthus Rhizosphere	YGALKAGTVKGALVSSTQAIAARRDGFRELPYQQPPWMSSPIVAGDDLLAKERPMLRAFIKAVAKGHIYYGRYPAQAIALTQKIQRISDSSIAKQIYDDDMLRQNPGGGMDEAAQRKVVERAREMFKVQNKVELSEMFDLSLAREVEAELKKAKWEP
Ga0207647_104678142	3300025904	Corn Rhizosphere	ELRYDQPPWMSSPIVAGDDLLSRERPMLRSFIKAVTKGHIYYGQYAAQAIALAQKVQRISSQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP
Ga0207660_108376781	3300025917	Corn Rhizosphere	MSSPIVAGDDLLAKERPMLRAFIKAVTKGHLWYGRHPAQAIALTQKVQRISDPNIAKQIYDDDMLRQNPGGGMDEAAQRKVVERAREMFKVQHKVELSEIFDLSLAREVDAELKKAKWE
Ga0207660_113659651	3300025917	Corn Rhizosphere	PGRHWVLQPNTESQVASALGGGAGQGVQLEPQLFTLVSSTQALAALKDGFRELRYDQPPWMSSPIVAGDDLLSRERPMLRSFIKAVTKGHIYYGQYPAQAIALAQKVQRIASQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP
Ga0207659_108408331	3300025926	Miscanthus Rhizosphere	FEQNNLQPNKEVAMLQLGTPDLRYGALKAGTVKGALVSSTQAIAARRDGFRELPYQQPPWMSSPIVAGDDLLAKERPMLRPFIKAVAKGHIYYGRYPAQAIALTQKIQRISDSSIAKQIYDDDMLRQNPGGGMDEAAQRKVVERAREMFKVQNKVELSEMFDLSLAREVEAELKKAKWEP
Ga0207668_110347562	3300025972	Switchgrass Rhizosphere	LSRERPMLRSFIKAVVKGHIYYGHYPAQAIALAQKVQRIASQSMAKQVYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSMAKEVEAELKKSKWEP
Ga0209875_10208081	3300027209	Groundwater Sand	YGALKAGTVKAALVSSTQALTALRDGFRELRYDQPPWLSSPIVAGDELLTRDRSMLRSFLRAVLKGHLYYGQHPSQAVALTQKVQRIDSQAMAKQIYEDDMLRHNPGGGLEEVAMRKVVERSREMLKVERKVELNEIFDLSLEILV
Ga0209874_11410241	3300027577	Groundwater Sand	QHGVRPHKDVALLQLGTPDLRYGALKAGTVKAALVSSTQALIALRDGFRELRYDQPPWLSSPIVAGDELLTRDRSMLRSFLRAVLKGHLYYGQHPSQAVGLTQKVQRIDSQAMAKQIYEDDMLRHNPGGGLEEVAMRKVVERSREMLKVERKVELNEIFDLSMAKETEAELKKSKWEP
Ga0209814_100258521	3300027873	Populus Rhizosphere	GLQAVKEGFRELPYQQPPWLSSPIVASDELLSRDRPMLRSLLRAIEKGHLYYGKNGTAAIALVQKVQRIENRETAKQIYEDDMLRHNPGGGLEDEAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKSKWEP
Ga0209465_101003322	3300027874	Tropical Forest Soil	DVILLQIGTPDVRYASLKAGTVRAALLASTQGLQAVKEGFRELPYHQPPWLSSPIVASDELMTRDRAMLRAFLRAVVKGHLYYGQYPAQAIALTQKVQRIDDPVVAKQIYDDDMLRHNPGGGLEDASMRKVVERSREMLKVQRKVELSEIFDLSLAKEAEAEVKKAKWEP
Ga0209382_112097982	3300027909	Populus Rhizosphere	RDGFRELRYEQPPWLSSPIVGSDELLARDRTMLRGFVRAVTKGHLYYGHYPSQAIALTQKVQRIDSQAMAKQIYDDDMLRHNPGGGLEETAMRKVVERSREMLKVQRKVELVDIFDLSMAKEAEAELKKAKWEP
Ga0209382_113800821	3300027909	Populus Rhizosphere	DVRYASLKAGTVRAALLASTQGLQAVKEGFRELPYQQPPWLSSPIVASDELLSRDRPMLRSLLRAIEKGHLYYGKNGTAAIALVQKVQRIENRETAKQIYEDDMLRHNPGGGLEDEAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKAKWEP
Ga0307281_101631371	3300028803	Soil	ILEQYGFNPAKDVILLQIGTPDVRHAALKAGTVKAALLSSTGGLQALQEGYRELPYQQPPWLSSPITAGDDILARDRGTLRSILRAAQKGHLYYGKNPAGAIELIRRVQRIESRALAKQIYDDDMQRHNPTGGLEESSMRRVTERARVMLKVQRPVDIHEVFDLSLAKEVEEELKRLKWE
Ga0307468_1011935671	3300031740	Hardwood Forest Soil	RPHKDVALLQLGTPDLRYGALKAGTVKAALVSSTQALTGLRDGFRELRYEQPPWLSSPIVGSDELLARDRAMLRGFVRAVTKGHLYYGHYPSQAIALTQKVQRIDSQAMAKQIYDDDMLRHNPGGGLEETAMRKVVERSCEMLKVQRKVELVDIFDLSMAKEAEAELKKAKWEP
Ga0214472_103947962	3300033407	Soil	MFRSFLRAVTKGHLYYGHHPAQAIALTQKVQRIDSPILAKQIYDDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSIVREVEAELKKIKWEP
Ga0214471_110083601	3300033417	Soil	HKDVALLQLGTPDLRYGALKAGTVKAALVSSTQALTALKDGFRELRYDQPPWLSSPLVAGDEILTRERAMFRSFLRAVTKGHLYYGHHPAQAIALTQKVQRIDSPILAKQIYDDDMLRHNPGGGLEEAAMRKVVERSREMLKVQNKVELSEIFDLSIVREVEAELKKIKWEP
Ga0364937_089306_247_594	3300034113	Sediment	VAGDDILTRERAMFHSFLRAVTKGHFYYGHHPAQAIALTQKVQRIDSPILAKQIYDDDMLRHNPGGGLEEATMRKVVERAREMLKVQNKVELGEIFDLSIVREVEAELKKIKWEP
Ga0364945_0012248_28_444	3300034115	Sediment	LQAVKEGFRELPYHQPPWLSSPIVASDDLLARDRSMLRSLLRAIEKGHFYYGQNGTAAIALIQKVQRIENRETAKQIYDDDMLRHNPGGGLEEAAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKSKWEP
Ga0364945_0272154_2_520	3300034115	Sediment	HKDVALLQLGTPDLRYGALKAGTVKAALVSSTQALTALKDGFRELRYDQPPWLSSPLVAGDEILTRERAMFRSFLRAVTKGHLYYGHHPAQAIALTQKVQRIDSPILAKQIYDDDMLRHNPGGGLEEAAMRKVVERAREMLKVQNKVELSEIFDLSIVREVEAELKKIKWEP
Ga0364925_0421247_2_448	3300034147	Sediment	KAALVSSTQALTALKEGFRELRYDQPPWLSSPIVASDELLGRDRAMLRGFLRGVLKGHLYYGQQPAQAIAITQKVQRIENQAMAKQIYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKAKWEP
Ga0364943_0022970_57_473	3300034354	Sediment	LQAVKEGFRELPYHQPPWLSSPIVASDELLARDRSMLRSFVRAVLKGHLYYGQNPAQAVAVTQKVQRIDSPVVAKQIYEDDMLRHNPGGGLEEAAMRKVVERSREMLKVQRKVELSEIFDLSMAKEAEAELKKSKWEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090604

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences