Metagenome / Metatranscriptome Family F090602

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F090602
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	75 residues
Representative Sequence	MHPQLPSASAARVEWELLPSLMNRLGGRRARSQPAWRETLPSELDFLEPSDPFEEVLPGLEMREVREPDIFQIFFG
Number of Associated Samples	84
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.56 %
% of genes near scaffold ends (potentially truncated)	23.15 %
% of genes from short scaffolds (< 2000 bps)	71.30 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.741 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (18.518 % of family members)
Environment Ontology (ENVO)	Unclassified (47.222 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.963 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.23% β-sheet: 0.00% Coil/Unstructured: 80.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF08857	ParBc_2	35.19
PF00929	RNase_T	5.56
PF13480	Acetyltransf_6	5.56
PF00916	Sulfate_transp	4.63
PF13792	Obsolete Pfam Family	2.78
PF01790	LGT	1.85
PF04773	FecR	1.85
PF00210	Ferritin	1.85
PF13411	MerR_1	0.93
PF01810	LysE	0.93
PF03466	LysR_substrate	0.93
PF00920	ILVD_EDD	0.93
PF01855	POR_N	0.93
PF01590	GAF	0.93
PF09945	DUF2177	0.93
PF02826	2-Hacid_dh_C	0.93
PF00596	Aldolase_II	0.93
PF00535	Glycos_transf_2	0.93
PF05226	CHASE2	0.93
PF06418	CTP_synth_N	0.93
PF03795	YCII	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG4318	Uncharacterized conserved protein	Function unknown [S]	35.19
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	4.63
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	4.63
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	4.63
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.85
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	1.85
COG0504	CTP synthase (UTP-ammonia lyase)	Nucleotide transport and metabolism [F]	0.93
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.93
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.93
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.93
COG4252	Extracytoplasmic sensor domain CHASE2 (specificity unknown)	Signal transduction mechanisms [T]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.74 %
Unclassified	root	N/A	34.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.74 %
Unclassified	root	N/A	34.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.74 %
Unclassified	root	N/A	34.26 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.11 %
Unclassified	root	N/A	34.26 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	38.89 %
Unclassified	root	N/A	34.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6.48 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	38.89 %
Unclassified	root	N/A	34.26 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	5.56 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.26 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	5.56 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	2.78 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.85 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.26 %
Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	5.56 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	2.78 %
Ralstonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia	1.85 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.26 %
Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	5.56 %
Ralstonia solanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	1.85 %
unclassified Methylibium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium	0.93 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.26 %
Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	5.56 %
Ralstonia solanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	1.85 %
Methylibium sp. T29-B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. T29-B	0.93 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002705\|JGI25156J39149_1000065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	83060	Open in IMG/M
3300003316\|rootH1_10003862	Not Available	12439	Open in IMG/M
3300003316\|rootH1_10003863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7174	Open in IMG/M
3300003320\|rootH2_10035252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	6062	Open in IMG/M
3300003322\|rootL2_10115875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2927	Open in IMG/M
3300003323\|rootH1_10049181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4193	Open in IMG/M
3300003323\|rootH1_10209476	Not Available	1140	Open in IMG/M
3300003752\|Ga0055539_1000362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	19549	Open in IMG/M
3300003761\|Ga0055535_1017581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	950	Open in IMG/M
3300005327\|Ga0070658_10033294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	4146	Open in IMG/M
3300005327\|Ga0070658_10420974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1149	Open in IMG/M
3300005327\|Ga0070658_10482638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	1070	Open in IMG/M
3300005327\|Ga0070658_10539683	All Organisms → cellular organisms → Bacteria → Proteobacteria	1009	Open in IMG/M
3300005330\|Ga0070690_100023732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3765	Open in IMG/M
3300005338\|Ga0068868_100177177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	1767	Open in IMG/M
3300005339\|Ga0070660_100021622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	4747	Open in IMG/M
3300005339\|Ga0070660_100309954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1295	Open in IMG/M
3300005364\|Ga0070673_100010703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	6221	Open in IMG/M
3300005365\|Ga0070688_100691409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	789	Open in IMG/M
3300005366\|Ga0070659_100052587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3204	Open in IMG/M
3300005366\|Ga0070659_100254534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1456	Open in IMG/M
3300005366\|Ga0070659_100280248	All Organisms → cellular organisms → Bacteria → Proteobacteria	1387	Open in IMG/M
3300005366\|Ga0070659_100662465	Not Available	900	Open in IMG/M
3300005366\|Ga0070659_101269382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. T29-B	653	Open in IMG/M
3300005367\|Ga0070667_102041252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	540	Open in IMG/M
3300005513\|Ga0077120_1005396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	14400	Open in IMG/M
3300005519\|Ga0077119_10004875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	15636	Open in IMG/M
3300005519\|Ga0077119_10016007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7077	Open in IMG/M
3300005519\|Ga0077119_10018669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6309	Open in IMG/M
3300005519\|Ga0077119_10232320	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300005543\|Ga0070672_100335669	Not Available	1286	Open in IMG/M
3300005563\|Ga0068855_100447159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	1411	Open in IMG/M
3300005563\|Ga0068855_101297703	Not Available	754	Open in IMG/M
3300005616\|Ga0068852_100684685	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300005843\|Ga0068860_100206212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1906	Open in IMG/M
3300006195\|Ga0075366_10063471	All Organisms → cellular organisms → Bacteria → Proteobacteria	2196	Open in IMG/M
3300009093\|Ga0105240_10022673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8318	Open in IMG/M
3300009098\|Ga0105245_11072900	Not Available	851	Open in IMG/M
3300009148\|Ga0105243_11542086	Not Available	689	Open in IMG/M
3300009500\|Ga0116229_10299550	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300009551\|Ga0105238_11058181	Not Available	833	Open in IMG/M
3300009551\|Ga0105238_11949398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	621	Open in IMG/M
3300009787\|Ga0116226_10213955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	1999	Open in IMG/M
3300010152\|Ga0126318_11103765	Not Available	1037	Open in IMG/M
3300013104\|Ga0157370_10907704	Not Available	799	Open in IMG/M
3300013296\|Ga0157374_12100460	Not Available	592	Open in IMG/M
3300014969\|Ga0157376_10323301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	1467	Open in IMG/M
3300015202\|Ga0167663_1055666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1307	Open in IMG/M
3300016371\|Ga0182034_10577383	Not Available	946	Open in IMG/M
3300016404\|Ga0182037_11711901	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300018414\|Ga0194135_11065864	Not Available	508	Open in IMG/M
3300020069\|Ga0197907_10731492	Not Available	1083	Open in IMG/M
3300020081\|Ga0206354_11346364	Not Available	806	Open in IMG/M
3300021170\|Ga0210400_10066700	All Organisms → cellular organisms → Bacteria → Proteobacteria	2812	Open in IMG/M
3300021402\|Ga0210385_10894015	Not Available	682	Open in IMG/M
3300021403\|Ga0210397_10109355	All Organisms → cellular organisms → Bacteria → Proteobacteria	1880	Open in IMG/M
3300021405\|Ga0210387_10658994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	929	Open in IMG/M
3300021407\|Ga0210383_11107658	Not Available	668	Open in IMG/M
3300022467\|Ga0224712_10198377	Not Available	911	Open in IMG/M
3300022908\|Ga0247779_1011520	All Organisms → cellular organisms → Bacteria	2790	Open in IMG/M
3300025226\|Ga0209674_100007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1077082	Open in IMG/M
3300025230\|Ga0209563_114146	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300025231\|Ga0207427_100782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	14498	Open in IMG/M
3300025242\|Ga0209258_101573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7595	Open in IMG/M
3300025256\|Ga0209759_1003123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6782	Open in IMG/M
3300025256\|Ga0209759_1036092	Not Available	904	Open in IMG/M
3300025909\|Ga0207705_10067673	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300025909\|Ga0207705_10146750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1765	Open in IMG/M
3300025912\|Ga0207707_10623562	Not Available	911	Open in IMG/M
3300025913\|Ga0207695_10031409	All Organisms → cellular organisms → Bacteria → Proteobacteria	5824	Open in IMG/M
3300025914\|Ga0207671_10902367	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300025919\|Ga0207657_10053733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3488	Open in IMG/M
3300025919\|Ga0207657_11001378	Not Available	641	Open in IMG/M
3300025920\|Ga0207649_11298593	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300025932\|Ga0207690_10026010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3683	Open in IMG/M
3300025932\|Ga0207690_10128055	All Organisms → cellular organisms → Bacteria → Proteobacteria	1854	Open in IMG/M
3300025932\|Ga0207690_10224692	Not Available	1438	Open in IMG/M
3300025932\|Ga0207690_11392435	Not Available	586	Open in IMG/M
3300025935\|Ga0207709_10686886	Not Available	818	Open in IMG/M
3300025949\|Ga0207667_10905887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	873	Open in IMG/M
3300025949\|Ga0207667_11816739	Not Available	573	Open in IMG/M
3300025960\|Ga0207651_10006157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6241	Open in IMG/M
3300025986\|Ga0207658_11814876	Not Available	556	Open in IMG/M
3300026041\|Ga0207639_10593373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium CG17_big_fil_post_rev_8_21_14_2_50_64_11	1021	Open in IMG/M
3300026089\|Ga0207648_12187114	Not Available	514	Open in IMG/M
3300026116\|Ga0207674_10400290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1327	Open in IMG/M
3300027817\|Ga0209112_10075128	Not Available	1063	Open in IMG/M
3300028381\|Ga0268264_10606980	Not Available	1079	Open in IMG/M
3300028813\|Ga0302157_10699410	Not Available	516	Open in IMG/M
3300029913\|Ga0311362_10354561	Not Available	1477	Open in IMG/M
3300029987\|Ga0311334_10268778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1324	Open in IMG/M
3300030002\|Ga0311350_11512342	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300030520\|Ga0311372_10448779	All Organisms → cellular organisms → Bacteria → Proteobacteria	1924	Open in IMG/M
3300030520\|Ga0311372_10555830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1659	Open in IMG/M
3300030521\|Ga0307511_10143398	Not Available	1395	Open in IMG/M
3300031572\|Ga0318515_10328918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	819	Open in IMG/M
3300031616\|Ga0307508_10251333	All Organisms → cellular organisms → Bacteria → Proteobacteria	1364	Open in IMG/M
3300031716\|Ga0310813_11045334	Not Available	746	Open in IMG/M
3300031726\|Ga0302321_102397518	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300031730\|Ga0307516_10001606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	31122	Open in IMG/M
3300031837\|Ga0302315_10329663	Not Available	867	Open in IMG/M
3300031845\|Ga0318511_10192721	Not Available	904	Open in IMG/M
3300031912\|Ga0306921_10682342	Not Available	1182	Open in IMG/M
3300031918\|Ga0311367_11601845	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300032066\|Ga0318514_10490669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	653	Open in IMG/M
3300033290\|Ga0318519_10169682	Not Available	1230	Open in IMG/M
3300034170\|Ga0370487_0002369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4546	Open in IMG/M
3300034170\|Ga0370487_0030011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1621	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	67.59%
Environmental	Environmental	32.41%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	67.59%
Terrestrial	Environmental → Terrestrial	30.56%
Aquatic	Environmental → Aquatic	1.85%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.33%
Soil	Environmental → Terrestrial → Soil	21.30%
Roots	Host-Associated → Plants → Roots	14.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.04%
Peat	Environmental → Terrestrial → Peat	8.33%
Rhizome	Host-Associated → Plants → Rhizome	5.56%
Freshwater	Environmental → Aquatic → Freshwater	1.85%
Peat Moss	Host-Associated → Plants → Peat Moss	1.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.93%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	23.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.33%
Epiphytes	Host-Associated → Plants → Roots → Epiphytes	6.48%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	5.56%
Endophytes	Host-Associated → Plants → Roots → Endophytes	4.63%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.85%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.93%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	23.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.33%
Unclassified	Host-Associated → Plants → Roots → Epiphytes → Unclassified	6.48%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	5.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.63%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	4.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.85%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	18.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.48%
Arabidopsis Root	Host-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root	6.48%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	5.56%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	4.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.63%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.85%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.85%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.93%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.93%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002705	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS	Host-Associated	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003752	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2	Host-Associated	Open in IMG/M
3300003761	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005513	Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)	Host-Associated	Open in IMG/M
3300005519	Combined assembly of arab plate scrape CL_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015202	Arctic sediment microbial communities from supraglacial cryoconite, Storglaci?ren, Tarfala, Sweden (Sample st-12a, ablation zone cryoconite)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018414	Freshwater sediment microbial communities in response to fracking from North America - Little Laurel Run_MetaG_LLRF_2013	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300025226	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025230	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025231	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025242	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025256	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25156J39149_100006523	3300002705	Arabidopsis Root	MQQQPTFASAARVEWELLPSLMSRLGGRRSRSQPAWLETMPSEIDLLEPSDPFEEVLPGLEMREVREPDIFQIFFG*
rootH1_100038625	3300003316	Sugarcane Root And Bulk Soil	MHQHLMSASAARVEWELLPSLLHRVGGRRARPQPAWSETLPSELDLLEPSDPFEEVLPGLQMREVREPDIFQIFFG
rootH1_100038639	3300003316	Sugarcane Root And Bulk Soil	MQQHLMPASAARVEWELLPSLLDRVSGRRPRSLPAWSETLPSELDLLEPSDPFEEVLPGLQMREVREPDIFQIFFG*
rootH2_100352528	3300003320	Sugarcane Root And Bulk Soil	MQHQPTSASAARVEWELLPSLMNRLGGRRTRSQPAWMETMPSEIDLLEPSDPFEEVLPGLQMREVREPDIFQIFFG*
rootL2_101158753	3300003322	Sugarcane Root And Bulk Soil	MHQHLMSASAARVEWELLPSLLHRVGGRRARPQPAWSETLPSELDLLEPSDPFEEVLPGLQMREVREPDIFQIFFG*
rootH1_100491814	3300003323	Sugarcane Root And Bulk Soil	MHQPSTSASAARVEWELLPSLMNRLGGRRARSQPAWLETMPSEIDLLEPSHPFEEVLPGLEMREVREPDIFHIFFG*
rootH1_102094762	3300003323	Sugarcane Root And Bulk Soil	MHHQPTSATAARVEWELLPSLMNRLGGRRARSQPAWMETLPSEIDVLEPSDPFQEVLPGLQMREVREPDIFQIFFG*
Ga0055539_10003629	3300003752	Arabidopsis Root	MQQHLMSAPAARVEWELLPSLLNRVSGRRLRSQPAWSETLPSELDLLEPSDPFEEVLPGLQMREVREPDIFQIFFG*
Ga0055535_10175811	3300003761	Arabidopsis Root	MHPQPTSAASARVEWELLPSLMTRLGGRRPRSQPAWRETMPSEIDLQEPSDPFEEVLPGLEVREVREPDIFQIFFG*
Ga0070658_100332945	3300005327	Corn Rhizosphere	MNYSPISPSASRVEWELLPSLLNLLGSRRARSQPAWMDTLLSELDVVEPSGAFEEVLPGLDMREVREPDIFQIFFG*
Ga0070658_104209741	3300005327	Corn Rhizosphere	MNHALQPSSARVEWELLPSLMNVLGSRRSRSQPAWMDTLVSEIDLLEPSGPFEELLPGLEMREVREPDIFQIFFG*
Ga0070658_104826382	3300005327	Corn Rhizosphere	MHPQLPAASAARVEWELLPSLMNRLGARRTRAQPAWHETMPSELDFLEPSDPFEEVLPGLQMREV
Ga0070658_105396833	3300005327	Corn Rhizosphere	MNHASISSSASRVEWELLPSLMKTLGSCRTRAQPAWMDTLLSELDIFEPSGPFEEVLPGLEMREVREPDIFQIFFG*
Ga0070690_1000237323	3300005330	Switchgrass Rhizosphere	MHQQLSCASDARVEWELLPSLMNRLGGRRARTQPAWLDTMPSELDFLEPSTPFEEVLPGLEMREVREPDIFEIFFS*
Ga0068868_1001771771	3300005338	Miscanthus Rhizosphere	MHQQLSCASDARVEWELLPSLMNRLGGRRARTQPAWLDTMPSELDFLEPSTPFEEVLPGLEMREVREPDIF
Ga0070660_1000216226	3300005339	Corn Rhizosphere	MNHSPISPSASRVEWELLPSLLNMLGSRRARSQPAWMDTLLSELDVVEPSGAFEEVLPGLDMREVREPDIFQIFFG*
Ga0070660_1003099542	3300005339	Corn Rhizosphere	MQQQPTFAFAARVEWELLPSLMSRLGGRRSRSQPAWLETMPSEIDLLEPSDPFEEVLPGLEMREVREPDIFQIFFG*
Ga0070673_1000107034	3300005364	Switchgrass Rhizosphere	MPPSHPVVTMNHVSMSSAANRVEWELLPSLLNVLGGRRTRSQPAWMDTLLSELDVVEPSGPFEEVLPGLEMREVREPDIFQIFFG*
Ga0070688_1006914091	3300005365	Switchgrass Rhizosphere	MQQQPTFASAARVEWELLPSLMSRLGGRRPRSQPAWLETMPSEIDLLEPSDAFEEVLPGLQMREVREPDIFQIFFG*
Ga0070659_1000525872	3300005366	Corn Rhizosphere	MNHSPISPSASRVEWELLPSLLSMLGSRRARSQPAWMDTLLSELDVVEPSGAFEEVLPGLDMREVREPDIFQIFFG*
Ga0070659_1002545342	3300005366	Corn Rhizosphere	MHPQLPSVSAARVEWELLPSLMNRLGGRRSRSQPAWSETLPSELDFLEPSDPFEEVLPGLQMREVREPDIFQIFFG*
Ga0070659_1002802483	3300005366	Corn Rhizosphere	MHPQLPSASAARVEWELLPSLMNRLGGRRARSQPAWRETLPSELDFLEPSDPFEEVLPGLEMREVREPDIFQIFFG*
Ga0070659_1006624652	3300005366	Corn Rhizosphere	MNHSPISPSASRVEWELLPSLLNMLGSRRARSQPAWMDTLLSELDIAEPSGAFEEVLPGLEMREVREPDIFQIFFG*
Ga0070659_1012693821	3300005366	Corn Rhizosphere	MNYSPISPSASRVEWELLPSLLNMLGSRRARSQPAWMDTLLSELDVVEPSGAFEEVLPGLDMREVREPDIFQIFFG*
Ga0070667_1020412521	3300005367	Switchgrass Rhizosphere	LSCASDARVEWELLPSLMNRLGGRRARTQPAWLDTMPSELDFLEPSTPFEEVLPGLEMREVREPDIFEIFFS*
Ga0077120_100539611	3300005513	Arabidopsis Rhizosphere	MHQQPISASAARVEWELLPSLMNRLGGRRARPQPAWLETMPSEIDVLEPSDPFEEVLPGLQMREVREPDIFQIFFG*
Ga0077119_100048758	3300005519	Arabidopsis Root	MNQHLHTAPAARVEWELLPSLLNRLGSRRPRSQPAWMDTMPSEIGFLEPSDPFEEVLPGLEMREVREPDIFDIFFG*
Ga0077119_100160077	3300005519	Arabidopsis Root	MNHSPISPSASRVEWELLPSLLNLLGSRRSRSQPAWMDTLLSELEVVEPSGAFEEVLPGLEMREVREPDIFQIFFG*
Ga0077119_100186694	3300005519	Arabidopsis Root	MNLSTIASSASRVEWELLPSLLNMMGGRRSQSQPAWRDTLLSELDLVEPSGPFEEVLPGLEMREVREPDIFQIFFG*
Ga0077119_102323202	3300005519	Arabidopsis Root	MNQFLSSAPAARVEWELLPSLLNRLGGRRSRAQPAWMDTVLSDFDFAEPSDPFEEVLPGLEMREVREPDIFEIFFG*
Ga0070672_1003356691	3300005543	Miscanthus Rhizosphere	MNQQLHAVSAARVEWELLPSLLNRLGSRRSRSQPAWMDTMPSEIGFLEPSDPFEEVLPGLEMREVREPDIFDIFFG*
Ga0068855_1004471591	3300005563	Corn Rhizosphere	MQQQPTIASAARVEWELLPSLMGRLGGRRPRSQPAWLETMPSEIDLLEPSAPFEEVLPGLEMREVREPDIFQIFFG*
Ga0068855_1012977031	3300005563	Corn Rhizosphere	MPPLHRRPMNHAVLPSSARVEWELLPSLMNVLGSRRSRAQPAWMDTLVSEIGMLEPSGPFEEVLPGLEMREVCEPDIFQIFFG*
Ga0068852_1006846851	3300005616	Corn Rhizosphere	MQQQPTFASAARVEWELLPSLMSRLGGRRPRSQPAWLETMPSEIDLLEPSDAFEEVLPGLQMR
Ga0068860_1002062122	3300005843	Switchgrass Rhizosphere	MHQQLSCASDTRVEWELLPSLMNRLGGRRARTQPAWLDTMPSELDFLEPSTPFEEVLPGLEMREVREPDIFEIFFS*
Ga0075366_100634713	3300006195	Populus Endosphere	MHPQPTSVSAARVEWELLPSLMNRLGGRRSRSQPAWSETQPSELDFLEPSDPFEEVLPGLQMREVREPDIFQIFFG*
Ga0105240_100226733	3300009093	Corn Rhizosphere	MQQQPTFASAARVEWELLPSLMSRLGGRRPRSQPAWLETMPSEIDLLEPSDAFEEVLPGLQMREVRESEIFQIFFG*
Ga0105245_110729002	3300009098	Miscanthus Rhizosphere	MHQQPISASAARVEWELLPSLMNRLGGRRARSQPAWRETLPSELDFLDASDPFEEVLPGLEMREVREPDIFQIFFG*
Ga0105243_115420862	3300009148	Miscanthus Rhizosphere	MHQQTTSASAARVEWELLPSLMNRLGGRRARPQPAWLETMPSEIDVLEPSDPFEEVLPGLQMREVREPDIFQIFFG*
Ga0116229_102995502	3300009500	Host-Associated	MTMRSTFASASISASRVEWELLPSLLNLLGRRRGLPEPAWLETVASEFELVEPSGPFEEVLPGLAMREVREPDIFQIFFG*
Ga0105238_110581811	3300009551	Corn Rhizosphere	MQQQPTFAFAARVEWELLPSLMSRLGGRRPRSQPAWLETMPSEIDLLEPSDAFEEVLPGLQMREVREPDIFQIFFG*
Ga0105238_119493981	3300009551	Corn Rhizosphere	MHPQLPSASAARVEWELLPSLMNRLGGRRSRPQPAWSETLPSELDFLEPSDPFEEVLPGLQMREVREPDIFQIFFG*
Ga0116226_102139551	3300009787	Host-Associated	MNMRSTSASASRVEWELLPSLLNLLGTRRAQLHPAWMETVPSEFELIEPSGPFEEVLPGLSVREVREPEIFHIFFG*
Ga0126318_111037652	3300010152	Soil	MQPQSTFASATRVEWELLPSLMNRLGGRRSRSQPAWLETMPSEIDLLEPSDPFEEVLPGLEMREVREPDIFQIFFG*
Ga0157370_109077042	3300013104	Corn Rhizosphere	MHPQLPSVSAARVEWELLPSLMNRLGGRRSRSQPAWSETLPSALDFLEPSDPFEEVLPGLQMREVREPDIFQIFFG*
Ga0157374_121004601	3300013296	Miscanthus Rhizosphere	MNHSSISPSASRVEWELLPSLLALVGGRRSRSQPAWRDTLLSELDVVEPSGPFEEVLPGLEMREVREPDIFQIFFG*
Ga0157376_103233011	3300014969	Miscanthus Rhizosphere	MHQQTTSASAARVEWELLPSLMNRLGGRRARTQPAWLDTMPSELDFLEPSTPFEEVLPGLEMREVREPDIFEIFFS*
Ga0167663_10556661	3300015202	Glacier Forefield Soil	MNMHTASAASARVEWELLPSLLNMLGRRPRSQPAWSETLPSELDVLEPSGPFHEVLPGLAMREVREPDIFNIFFG*
Ga0182034_105773833	3300016371	Soil	MHQHLFAASADRVEWELLPSLLNRLGGGRARPQPAWRETLPSELDLVEPSDPFAEVLPGLAM
Ga0182037_117119012	3300016404	Soil	PGYAMHQHLFAASADRVEWELLPSLLNRLGGGRARPQPAWRETLPSELDLVEPSDPFAEVLPGLAMREVREPDIFAIFFG
Ga0194135_110658641	3300018414	Watersheds	MPTHTTTAARVEWELLPSLLNMLGKRRQRSLPAWMETVPSEMDLLEPSGPFQELLPGLAVREVREPDIFHIFFG
Ga0197907_107314922	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MQQQPTFASAARVEWELLPSLMSRLGGRRSRSQPAWLETMPSEIDLLEPSDPFEEVLPGLEMREVREPDIFQIFFG
Ga0206354_113463641	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MQQQPTFASAARVEWELLPSLMSRLGGRRSRSQPAWLETMPSEIDLLEPSDPFEEVLPGLEMREVREPDIFQ
Ga0210400_100667004	3300021170	Soil	MSRLSASTAAAPARIDWELLPSLRNLLGARRNRSQPTWMDTVPSDFTAPLMSGPFEEVLPGLQVREVREPDIFAIFFS
Ga0210385_108940152	3300021402	Soil	MNQHLANASAARVEWELLPSLLNLLGNRRTRSHPAWMETVVSEFDMAEPSTPFEEVLPGLSVREVREPDIFQIFFG
Ga0210397_101093551	3300021403	Soil	MNHHQPSASAARVEWELLPSLLNLLGARRQRAQPAWMDTVPSELDVLEPSGPFHEVLPGLQMREVREPDIFQIFFG
Ga0210387_106589941	3300021405	Soil	MNQHLSNASAARVEWELLPSLLNLLGNRRTRSHPAWMETVVSEFDMAEPSTPFEEVLPGLSVREVREPDIFQIFFG
Ga0210383_111076582	3300021407	Soil	MNHHLPSASAARVEWELLPSLLNLLGARRQRAQPAWMDTVPSELDVLEPSGPFHEVLPGLQMREVREPDIFQIFFG
Ga0224712_101983772	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MQQQPTFASAARVEWELLPSLMSRLGGRRSRSQPAWLETMPSEIDLLEPSDPFEEVLPGLEMREVREPD
Ga0247779_10115201	3300022908	Plant Litter	MNQQLTSAAAARVEWELLPSLLDMLGRGRPRSQPAWRETLPSELDIVEPSGPFEEVLPGLVMREVREPDIFQIFFG
Ga0209674_1000071026	3300025226	Arabidopsis Root	MQQHLMSAPAARVEWELLPSLLNRVSGRRLRSQPAWSETLPSELDLLEPSDPFEEVLPGLQMREVREPDIFQIFFG
Ga0209563_1141462	3300025230	Arabidopsis Root	MNYSPISPSASRVEWELLPSLLNMLGSRRARSQPAWMDTLLSELDVVEPSGAFEEVLPGLDMREVREPDIFQIFFG
Ga0207427_10078214	3300025231	Arabidopsis Rhizosphere	MHQQPISASAARVEWELLPSLMNRLGGRRARPQPAWLETMPSEIDVLEPSDPFEEVLPGLQMREVREPDIFQIFFG
Ga0209258_1015733	3300025242	Arabidopsis Root	MHPQPTSAASARVEWELLPSLMTRLGGRRPRSQPAWRETMPSEIDLQEPSDPFEEVLPGLEVREVREPDIFQIFFG
Ga0209759_10031233	3300025256	Arabidopsis Root	MNHSPISPSASRVEWELLPSLLNLLGSRRSRSQPAWMDTLLSELEVVEPSGAFEEVLPGLEMREVREPDIFQIFFG
Ga0209759_10360922	3300025256	Arabidopsis Root	MNQFLSSAPAARVEWELLPSLLNRLGGRRSRAQPAWMDTVLSDFDFAEPSDPFEEVLPGLEMREVREPDIFEIFFG
Ga0207705_100676731	3300025909	Corn Rhizosphere	MNHALQPSSARVEWELLPSLMNVLGSRRSRSQPAWMDTLVSEIDLLEPSGPFEELLPGLEMREVREPDIFQIFFG
Ga0207705_101467503	3300025909	Corn Rhizosphere	MNYSPISPSASRVEWELLPSLLNLLGSRRARSQPAWMDTLLSELDVVEPSGAFEEVLPGLDMREVREPDIFQIFFG
Ga0207707_106235622	3300025912	Corn Rhizosphere	HPQLPAASAARVEWELLPSLMNRLGARRTRAQPAWHETMPSELDFLEPSDPFEEVLPGLQMREVREPDIFQIFFG
Ga0207695_100314098	3300025913	Corn Rhizosphere	MQQQPTFASAARVEWELLPSLMSRLGGRRPRSQPAWLETMPSEIDLLEPSDAFEEVLPGLQMREVREPEIFRS
Ga0207671_109023672	3300025914	Corn Rhizosphere	MQQQPTFAFAARVEWELLPSLMSRLGGRRPRSQPAWLETMPSEIDLLEPSDAFEEVLPGLQMREVREPDIFQIFFG
Ga0207657_100537332	3300025919	Corn Rhizosphere	MNHSPISPSASRVEWELLPSLLNMLGSRRARSQPAWMDTLLSELDVVEPSGAFEEVLPGLDMREVREPDIFQIFFG
Ga0207657_110013781	3300025919	Corn Rhizosphere	MNYSPISPSASRVEWELLPSLLNLLGSRRARSQPAWMDTLLSELDVVEPSGAFEEVLPGLDMREVREADIFQIFFG
Ga0207649_112985932	3300025920	Corn Rhizosphere	ARVEWELLPSLMSRLGGRRSRSQPAWLETMPSEIDLLEPSDPFEEVLPGLEMREVREPDIFQIFFG
Ga0207690_100260102	3300025932	Corn Rhizosphere	MNHSPISPSASRVEWELLPSLLSMLGSRRARSQPAWMDTLLSELDVVEPSGAFEEVLPGLDMREVREPDIFQIFFG
Ga0207690_101280551	3300025932	Corn Rhizosphere	MHPQLPSVSAARVEWELLPSLMNRLGGRRSRSQPAWSETLPSELDFLEPSDPFEEVLPGLQMREVREPDIFQIFFG
Ga0207690_102246921	3300025932	Corn Rhizosphere	MNHSPISPSASRVEWELLPSLLNMLGSRRARSQPAWMDTLLSELDIAEPSGAFEEVLPGLEMREVREPDIFQIFFG
Ga0207690_113924351	3300025932	Corn Rhizosphere	LPSASAARVEWELLPSLMNRLGGRRARSQPAWRETLPSELDFLEPSDPFEEVLPGLEMREVREPDIFQIFFG
Ga0207709_106868861	3300025935	Miscanthus Rhizosphere	PGSAMHPQPTSVSAARVEWELLPSLMNRLGGRRSRSQPAWSETQPSELDFLEPSDPFEEVLPGLQMREVREPDIFQIFFG
Ga0207667_109058871	3300025949	Corn Rhizosphere	MQQQPTIASAARVEWELLPSLMGRLGGRRPRSQPAWLETMPSEIDLLEPSAPFEEVLPGLEMREVREPDIFQIFFG
Ga0207667_118167392	3300025949	Corn Rhizosphere	MPPLHRRPMNHAVLPSSARVEWELLPSLMNVLGSRRSRAQPAWMDTLVSEIGMLEPSGPFEEVLPGLEMREVCEPDIFQIFFG
Ga0207651_100061574	3300025960	Switchgrass Rhizosphere	MPPSHPVVTMNHVSMSSAANRVEWELLPSLLNVLGGRRTRSQPAWMDTLLSELDVVEPSGPFEEVLPGLEMREVREPDIFQIFFG
Ga0207658_118148762	3300025986	Switchgrass Rhizosphere	HAMHQQLSCASDARVEWELLPSLMNRLGGRRARTQPAWLDTMPSELDFLEPSTPFEEVLPGLEMREVREPDIFEIFFS
Ga0207639_105933731	3300026041	Corn Rhizosphere	MHPQLPSVSAARVEWELLPSLMNRLGGRRSRSQPAWSETLPSELDFLEPSDPFEEVLPGLQMREVREPDI
Ga0207648_121871141	3300026089	Miscanthus Rhizosphere	MHPQLPSASAARVEWELLPSLMNRLGGRRARSQPAWRETLPSELDFLDASDPFEEVLPGLQMREVREPDIFQIFFG
Ga0207674_104002903	3300026116	Corn Rhizosphere	RVEWELLPSLMTRLVARRPRAQPAWRETMPSELDLLEPSDPFEEVLPGLEMREVREPDIFQIFFG
Ga0209112_100751282	3300027817	Forest Soil	MNKQLVSYTARVEWELLPSLLNVLGARRGRPSQPAWSDTVPSELDVVEPSGPFQEVLPGLVMREVREPDIFQIFFG
Ga0268264_106069801	3300028381	Switchgrass Rhizosphere	MHQQLSCASDTRVEWELLPSLMNRLGGRRARTQPAWLDTMPSELDFLEPSTPFEEVLPGLEMREVREPDIFEIFFS
Ga0302157_106994101	3300028813	Bog	MPATAMTMRSTSTSASRVEWELLPSLLNLLGTRRPQSHPAWMETVPSEFELIEPSGPFEEVLPGLSVREVREPEIFHIFFG
Ga0311362_103545613	3300029913	Bog	MNKPTSSTLASRVEWELLPSLLNMLGKGRPRSHPAWMETMPSELDIAMPSGPFEEVLPGLAMREVREPDIFQIFFGR
Ga0311334_102687782	3300029987	Fen	MNTHTVSAARVEWELLPSLLNMLGNRRQRSQPAWMETVPSEFDLAEASDPFEEVLPGLSVREVREPDIFQIFFG
Ga0311350_115123421	3300030002	Fen	MNTHTVSAARVEWELLPSLLNMLGNRRQRSQPAWMETVASEFDLAETSDPFEEVLPGLSVREVREPDIFQIFFG
Ga0311372_104487792	3300030520	Palsa	MNQPPSSASAARVEWELLPSLLNLLGNRRPRSHPAWMETVPSAFDMAEPSTPFEEVLPGLSVREVREPDIFQIFFG
Ga0311372_105558302	3300030520	Palsa	MNKQSFSASAARVEWELLPSLLNMLGNRRQRSHPAWMETMVSEFDMAEPSEPFEEVLPGLSVREVREPDIFQIFFG
Ga0307511_101433983	3300030521	Ectomycorrhiza	MNQQLHSASAARVEWELLPSLLNKLGARRPRSQPAWMDTMPSEIGFLEPSDPFEEVLPGLEMREVREPDIFDIFFG
Ga0318515_103289181	3300031572	Soil	MHQHLFAASADRVEWELLPSLLNRLGGGRARPQPAWRETLPSELDLVEPSDPFAEVLPGLAMREVREPDIFAIFFG
Ga0307508_102513333	3300031616	Ectomycorrhiza	HAFASATCVEWELLPSLLNVLGNRRQRAQPAWRETEVSAFDMSAEPSGPFEEVLPGLAMREVREPDIFQIFFG
Ga0310813_110453342	3300031716	Soil	MHPQPTSVSAARVEWELLPSLMNRLGGRRSRSQPAWSETQPSELDFLEPSDPFEEVLPGLQMREVREPDIFQIFFG
Ga0302321_1023975181	3300031726	Fen	TITVHRGASAPPAVQTMNKHLSSPSASRVEWELLPSLLNMLGTRRTRSTPAWMDTVVSDFNFAEPSTPFEEVLPGLAVREVSEPDIFQIFFC
Ga0307516_1000160615	3300031730	Ectomycorrhiza	MNTQHATASASRVEWELLPSLLNMLGNRRQRSQPAWMETVVSEFDLAPTSEPFEEVLPGLVMREVREPDIFQIFFG
Ga0302315_103296632	3300031837	Palsa	MNKHTSSTLASRVEWELLPSLLNMLGKGRPRSHPAWMETMPSELDIAMPSGPFEEVLPGLAMREV
Ga0318511_101927211	3300031845	Soil	MHQPLISASAARVEWELLPSLLNRLGGRRSRSQPAWLETVPSELDYLEPSDPFEEVLPGLQMREVREPDIFQIFFG
Ga0306921_106823423	3300031912	Soil	MHQHLFAASADRVEWELLPSLLNRLGGGRARPQPAWRETLPSELDLVEPSDPFAEVLPGLAMRE
Ga0311367_116018451	3300031918	Fen	MNKHLSSPSASRVEWELLPSLLNMLGTRRTRSTPAWMDTVVSDFNFAEPSTPFEEVLPGLAVREVSEPDIFQIFFC
Ga0318514_104906691	3300032066	Soil	MHQHLFAASADRVEWELLPSLLNRLGGGRARPQPAWRETLPSELDLVEPSDPFAEVLPGLAMREV
Ga0318519_101696823	3300033290	Soil	MHQHLFAASADRVEWELLPSLLNRLGGGRARPQPAWRETLPSELDLVEPSDPFAEVLPGLAMREVR
Ga0370487_0002369_2732_2962	3300034170	Untreated Peat Soil	MNKHLSSASASRVEWELLPSLLNMLGNRRQRSQPAWMETMPSEFDVAAPSEPFEEVLPGLSVREVREPDIFQIFFG
Ga0370487_0030011_667_897	3300034170	Untreated Peat Soil	MNKHLSSASASRVEWELLPSLLNMLGNRRQRSQPAWMDTLPSEFDVAAPSAPFEEVLPGLSVREVCEPDIFQIFFG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090602

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences