Metagenome / Metatranscriptome Family F090599

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090599
Family Type	Metagenome / Metatranscriptome
Number of Sequences	108
Average Sequence Length	90 residues
Representative Sequence	MNKIQSVKTFLVLGTIVAVAMIGLTSSNARVYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYD
Number of Associated Samples	78
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	27.78 %
% of genes near scaffold ends (potentially truncated)	34.26 %
% of genes from short scaffolds (< 2000 bps)	69.44 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Archaea (98.148 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.296 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.111 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.89% β-sheet: 0.00% Coil/Unstructured: 61.11%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF01938	TRAM	3.70
PF02010	REJ	2.78
PF09490	CbtA	1.85
PF09489	CbtB	1.85
PF01266	DAO	1.85
PF01435	Peptidase_M48	1.85
PF04127	DFP	1.85
PF01522	Polysacc_deac_1	0.93
PF07726	AAA_3	0.93
PF06863	DUF1254	0.93
PF01774	UreD	0.93
PF00266	Aminotran_5	0.93
PF14417	MEDS	0.93
PF00850	Hist_deacetyl	0.93
PF00210	Ferritin	0.93
PF06348	DUF1059	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.85
COG0452	Phosphopantothenoylcysteine synthetase/decarboxylase CoaBC	Coenzyme transport and metabolism [H]	1.85
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG0829	Urease accessory protein UreH	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	98.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.85 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	25.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	25.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	18.52 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	6.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	18.52 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	6.48 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	18.52 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	6.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	10.19 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	6.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	9.26 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	6.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.93 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918002\|contig06737	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2192	Open in IMG/M
3300001431\|F14TB_101233255	All Organisms → cellular organisms → Archaea	3991	Open in IMG/M
3300002090\|JGI24806J26614_1002654	All Organisms → cellular organisms → Archaea	5951	Open in IMG/M
3300002090\|JGI24806J26614_1009430	All Organisms → cellular organisms → Archaea	1617	Open in IMG/M
3300002099\|JGI24808J26613_1017184	All Organisms → cellular organisms → Archaea	1209	Open in IMG/M
3300002099\|JGI24808J26613_1043217	All Organisms → cellular organisms → Archaea	616	Open in IMG/M
3300005186\|Ga0066676_10032840	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2839	Open in IMG/M
3300005186\|Ga0066676_10290728	All Organisms → cellular organisms → Archaea	1078	Open in IMG/M
3300005186\|Ga0066676_10419025	All Organisms → cellular organisms → Archaea	904	Open in IMG/M
3300005269\|Ga0065706_1002005	All Organisms → cellular organisms → Archaea	1291	Open in IMG/M
3300005289\|Ga0065704_10013917	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2057	Open in IMG/M
3300005289\|Ga0065704_10013977	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	3728	Open in IMG/M
3300005289\|Ga0065704_10019595	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2457	Open in IMG/M
3300005289\|Ga0065704_10105597	All Organisms → cellular organisms → Archaea	2101	Open in IMG/M
3300005294\|Ga0065705_10036389	All Organisms → cellular organisms → Archaea	1440	Open in IMG/M
3300005295\|Ga0065707_10313198	All Organisms → cellular organisms → Archaea	972	Open in IMG/M
3300005446\|Ga0066686_10062238	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	2313	Open in IMG/M
3300005446\|Ga0066686_10180883	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1406	Open in IMG/M
3300005518\|Ga0070699_100128921	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	2229	Open in IMG/M
3300005937\|Ga0081455_10000668	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	44422	Open in IMG/M
3300005937\|Ga0081455_10420944	All Organisms → cellular organisms → Archaea	921	Open in IMG/M
3300006049\|Ga0075417_10612301	All Organisms → cellular organisms → Archaea	555	Open in IMG/M
3300006196\|Ga0075422_10033123	All Organisms → cellular organisms → Archaea	1811	Open in IMG/M
3300006572\|Ga0074051_11653292	All Organisms → cellular organisms → Archaea	579	Open in IMG/M
3300006577\|Ga0074050_11414690	All Organisms → cellular organisms → Archaea	561	Open in IMG/M
3300006844\|Ga0075428_100049766	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	4598	Open in IMG/M
3300006844\|Ga0075428_100267111	All Organisms → cellular organisms → Archaea	1841	Open in IMG/M
3300006845\|Ga0075421_100336980	All Organisms → cellular organisms → Archaea	1825	Open in IMG/M
3300006847\|Ga0075431_100232585	All Organisms → cellular organisms → Archaea	1877	Open in IMG/M
3300006871\|Ga0075434_100352270	All Organisms → cellular organisms → Archaea	1493	Open in IMG/M
3300006871\|Ga0075434_102586082	All Organisms → cellular organisms → Archaea	508	Open in IMG/M
3300006904\|Ga0075424_102048982	All Organisms → cellular organisms → Archaea	603	Open in IMG/M
3300006904\|Ga0075424_102486495	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300006969\|Ga0075419_10792978	All Organisms → cellular organisms → Archaea	677	Open in IMG/M
3300009012\|Ga0066710_100371621	All Organisms → cellular organisms → Archaea	2122	Open in IMG/M
3300009100\|Ga0075418_10253971	All Organisms → cellular organisms → Archaea	1872	Open in IMG/M
3300009100\|Ga0075418_12658128	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
3300009147\|Ga0114129_10392500	All Organisms → cellular organisms → Archaea	1830	Open in IMG/M
3300009147\|Ga0114129_10394754	All Organisms → cellular organisms → Archaea	1824	Open in IMG/M
3300009147\|Ga0114129_12620188	All Organisms → cellular organisms → Archaea	601	Open in IMG/M
3300009147\|Ga0114129_13053978	All Organisms → cellular organisms → Archaea	549	Open in IMG/M
3300009156\|Ga0111538_10378335	All Organisms → cellular organisms → Archaea	1793	Open in IMG/M
3300009156\|Ga0111538_13666318	All Organisms → cellular organisms → Archaea	532	Open in IMG/M
3300009162\|Ga0075423_12571828	All Organisms → cellular organisms → Archaea	556	Open in IMG/M
3300009808\|Ga0105071_1062316	All Organisms → cellular organisms → Archaea	622	Open in IMG/M
3300009815\|Ga0105070_1048996	All Organisms → cellular organisms → Archaea	781	Open in IMG/M
3300009821\|Ga0105064_1143645	All Organisms → cellular organisms → Archaea	511	Open in IMG/M
3300010304\|Ga0134088_10424472	All Organisms → cellular organisms → Archaea	650	Open in IMG/M
3300010329\|Ga0134111_10085733	All Organisms → cellular organisms → Archaea	1192	Open in IMG/M
3300010329\|Ga0134111_10087296	All Organisms → cellular organisms → Archaea	1183	Open in IMG/M
3300010333\|Ga0134080_10231071	All Organisms → cellular organisms → Archaea	810	Open in IMG/M
3300010336\|Ga0134071_10074880	All Organisms → cellular organisms → Archaea	1576	Open in IMG/M
3300010336\|Ga0134071_10092388	All Organisms → cellular organisms → Archaea	1429	Open in IMG/M
3300012201\|Ga0137365_10001265	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	19388	Open in IMG/M
3300012204\|Ga0137374_10004286	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	16979	Open in IMG/M
3300012353\|Ga0137367_10005249	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	10497	Open in IMG/M
3300012353\|Ga0137367_10453896	All Organisms → cellular organisms → Archaea	905	Open in IMG/M
3300012402\|Ga0134059_1336324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300012972\|Ga0134077_10043488	All Organisms → cellular organisms → Archaea	1638	Open in IMG/M
3300012972\|Ga0134077_10056014	All Organisms → cellular organisms → Archaea	1463	Open in IMG/M
3300014154\|Ga0134075_10434435	All Organisms → cellular organisms → Archaea	582	Open in IMG/M
3300015358\|Ga0134089_10132027	All Organisms → cellular organisms → Archaea	976	Open in IMG/M
3300015372\|Ga0132256_100315751	All Organisms → cellular organisms → Archaea	1650	Open in IMG/M
3300018027\|Ga0184605_10005818	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	4472	Open in IMG/M
3300018027\|Ga0184605_10007778	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	3993	Open in IMG/M
3300018028\|Ga0184608_10063893	All Organisms → cellular organisms → Archaea	1479	Open in IMG/M
3300018031\|Ga0184634_10000669	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	9189	Open in IMG/M
3300018051\|Ga0184620_10000449	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	7669	Open in IMG/M
3300018051\|Ga0184620_10007663	All Organisms → cellular organisms → Archaea	2346	Open in IMG/M
3300018052\|Ga0184638_1000089	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	21126	Open in IMG/M
3300018061\|Ga0184619_10249054	All Organisms → cellular organisms → Archaea	817	Open in IMG/M
3300018067\|Ga0184611_1014254	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	2340	Open in IMG/M
3300018072\|Ga0184635_10064859	All Organisms → cellular organisms → Archaea	1421	Open in IMG/M
3300018072\|Ga0184635_10103070	All Organisms → cellular organisms → Archaea	1129	Open in IMG/M
3300018073\|Ga0184624_10084094	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1343	Open in IMG/M
3300018073\|Ga0184624_10116116	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1156	Open in IMG/M
3300018073\|Ga0184624_10371422	All Organisms → cellular organisms → Archaea	639	Open in IMG/M
3300018073\|Ga0184624_10443890	All Organisms → cellular organisms → Archaea	570	Open in IMG/M
3300018077\|Ga0184633_10478491	All Organisms → cellular organisms → Archaea	609	Open in IMG/M
3300018078\|Ga0184612_10306017	All Organisms → cellular organisms → Archaea	814	Open in IMG/M
3300018081\|Ga0184625_10355530	All Organisms → cellular organisms → Archaea	761	Open in IMG/M
3300019867\|Ga0193704_1041707	All Organisms → cellular organisms → Archaea	913	Open in IMG/M
3300019998\|Ga0193710_1001568	All Organisms → cellular organisms → Archaea	2391	Open in IMG/M
3300020018\|Ga0193721_1057972	All Organisms → cellular organisms → Archaea	1015	Open in IMG/M
3300021344\|Ga0193719_10009776	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	4007	Open in IMG/M
3300021951\|Ga0222624_1625595	All Organisms → cellular organisms → Archaea	524	Open in IMG/M
3300026324\|Ga0209470_1006382	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	7535	Open in IMG/M
3300026324\|Ga0209470_1014840	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	4441	Open in IMG/M
3300026537\|Ga0209157_1001742	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	17865	Open in IMG/M
3300026537\|Ga0209157_1106659	All Organisms → cellular organisms → Archaea	1320	Open in IMG/M
3300026693\|Ga0208709_101394	All Organisms → cellular organisms → Archaea	938	Open in IMG/M
3300026973\|Ga0207479_100073	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	7702	Open in IMG/M
3300027324\|Ga0209845_1005338	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2214	Open in IMG/M
3300027384\|Ga0209854_1068284	All Organisms → cellular organisms → Archaea	624	Open in IMG/M
3300027523\|Ga0208890_1002569	All Organisms → cellular organisms → Archaea	1964	Open in IMG/M
3300027560\|Ga0207981_1058198	All Organisms → cellular organisms → Archaea	707	Open in IMG/M
3300027561\|Ga0209887_1040824	All Organisms → cellular organisms → Archaea	1026	Open in IMG/M
3300027577\|Ga0209874_1107687	All Organisms → cellular organisms → Archaea	658	Open in IMG/M
3300027873\|Ga0209814_10051530	All Organisms → cellular organisms → Archaea	1718	Open in IMG/M
3300027873\|Ga0209814_10061990	All Organisms → cellular organisms → Archaea	1566	Open in IMG/M
3300027909\|Ga0209382_10005217	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	16968	Open in IMG/M
3300027949\|Ga0209860_1000758	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	4745	Open in IMG/M
3300028791\|Ga0307290_10016652	All Organisms → cellular organisms → Archaea	2530	Open in IMG/M
3300028885\|Ga0307304_10220126	All Organisms → cellular organisms → Archaea	818	Open in IMG/M
3300031720\|Ga0307469_11797002	All Organisms → cellular organisms → Archaea	592	Open in IMG/M
3300031740\|Ga0307468_100159219	All Organisms → cellular organisms → Archaea	1464	Open in IMG/M
3300032174\|Ga0307470_11355554	All Organisms → cellular organisms → Archaea	585	Open in IMG/M
3300032205\|Ga0307472_101092657	All Organisms → cellular organisms → Archaea	754	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.22%
Host-Associated	Host-Associated	27.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.63%
Plants	Host-Associated → Plants	27.78%
Aquatic	Environmental → Aquatic	17.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.22%
Sediment	Environmental → Aquatic → Sediment	16.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.56%
Freshwater	Environmental → Aquatic → Freshwater	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	16.67%
Sand	Environmental → Terrestrial → Soil → Sand	7.41%
Loam	Environmental → Terrestrial → Soil → Loam	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	16.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.26%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	7.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.85%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.30%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	16.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.41%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	3.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.85%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Rhizosphere And Bulk Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Rhizosphere And Bulk Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918002	Rhizosphere and bulk soil microbial communities from the Great Lakes - Sample MSB1	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002090	Soil microbial communities from Manhattan, Kansas, USA - Sample 200um MDA	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005269	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019998	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026693	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN595 (SPAdes)	Environmental	Open in IMG/M
3300026973	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-C (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MSB1_00095790	2140918002	Rhizosphere And Bulk Soil	MNKKQSMKTFLVLGTIVAVAMIGITSSNVRLYAGGYGNDDDINWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD
F14TB_1012332555	3300001431	Soil	MNKNRSMQTILLLGTILAVAMVGIANSNARVYAGNGDYDTGDDHINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
JGI24806J26614_100265411	3300002090	Soil	MNKKQSMKTFLVLGTIIAVAMIGITSSNARLYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAQDRGDNLAGYEVEKCEHKSGSYD*
JGI24806J26614_10094302	3300002090	Soil	MNKKQSMKSFLVLGTIVAIAMIGITSSNARLYAGGYGNDDDINWKKFKNSNTYEDANKKTQKCFDRAHDRGDNLAGYEVEKCEDKPGSYD*
JGI24808J26613_10171841	3300002099	Soil	VAMIGITSSNARLYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
JGI24808J26613_10432171	3300002099	Soil	MNKKQSMKTFLVLGTIVAVAMIGITSSNARLYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0066676_100328403	3300005186	Soil	MNKIQSIKTFLVLGTIVAVAMIGLTSSNARIYAGGYGNDDDINWKKFKNSNTYDDANKKTEKCFERAHDRGDNLAGYEVKKCEDKSGSYD*
Ga0066676_102907282	3300005186	Soil	MNKTQSIKTSLILGTIFAVGMIGLTSSTNQVFAGKDGYGNNDDHINWKKFKNSNTYDDADKKTQKCFDRAHDRGDNLAGYEVQKCEDKPKSYD*
Ga0066676_104190252	3300005186	Soil	MKAFLVLGTIVAVAMIGITSSNARVYAGGYGNDDDISWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0065706_10020051	3300005269	Switchgrass Rhizosphere	MNKKQSMKTFLVLGTIVAVAMIGITSSNARLYAGGYGNDDDINWKKFKNSNNYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0065704_100139172	3300005289	Switchgrass Rhizosphere	MNKKQSMKTFLVLGTIVAVAMIGISSSNARVYAGGYGDNDDHINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEIKKCEDKSGSYD*
Ga0065704_100139773	3300005289	Switchgrass Rhizosphere	MNKKQSMKTFLVLGTIVAVAMIGITSSNVRLYAGGYGNDDDINWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0065704_100195951	3300005289	Switchgrass Rhizosphere	MNKKQSMKTFLVLGTIVAVAMIGITSSNARLYAGGYGNDDDINWKKFKNSNNYEDANKKTQKCFERAHDRGDNLAGYEVKKCEDKPGSYD*
Ga0065704_101055972	3300005289	Switchgrass Rhizosphere	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD*
Ga0065705_100363892	3300005294	Switchgrass Rhizosphere	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEKKSGSYD*
Ga0065707_103131982	3300005295	Switchgrass Rhizosphere	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFERAHDRGDNLAGYEVKKCEKKSGSYD*
Ga0066686_100622384	3300005446	Soil	LGTIFAVGMIGLTSSTNQVFAGKDGYGNNDDHINWKKFKNSNTYDDADKKTQKCFDRAHDRGDNLAGYEVQKCEDKPKSYD*
Ga0066686_101808833	3300005446	Soil	MNKKQSMKAFLVLGTIVAVAMIGITSSNARVYAGGYGNDDDISWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0070699_1001289211	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNKTQSIKTSLILGTIFAVGMIGLTSSTNQVFAGKNGYDNNDDHINWKKFKNSNTYDGADKKTQKCFERAHDRGDNLAGYEVQKCEDKPKSYD*
Ga0081455_1000066841	3300005937	Tabebuia Heterophylla Rhizosphere	MNKKQSMKTFLVLGTIVAVAMIGITSSNARLYAGGYGNDDDINWKKFKNSNTYDDANKKTQNCFDRAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0081455_104209442	3300005937	Tabebuia Heterophylla Rhizosphere	MMNKKLSVKTFLVLGTILAVAMIGLTSSNARVYAGGYGDDDDHINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYD*
Ga0075417_106123011	3300006049	Populus Rhizosphere	MNKKQSMKTFLVLGTIVAVAMIGITSSNVRLYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*EVLTSVLSAFTTIFFSFFIVEILYMFYHS
Ga0075422_100331234	3300006196	Populus Rhizosphere	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD*
Ga0074051_116532921	3300006572	Soil	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGGYGNDDHINYKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEKKSGSYNEALRPVTKCIHHNFFSFFL
Ga0074050_114146902	3300006577	Soil	GTIVAVAMIGISSSNASVYAGGYGNDDHINYKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEKKSGSYNEALRPVTKYIHHNFFSFFL
Ga0075428_1000497661	3300006844	Populus Rhizosphere	MNKKQSMKTFLVLGTIVAVAMIGITSSNVRLYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0075428_1002671114	3300006844	Populus Rhizosphere	VKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFDRAHDRGDNLAGYEVKKCEKKSGSYD*
Ga0075421_1003369801	3300006845	Populus Rhizosphere	TIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD*
Ga0075431_1002325851	3300006847	Populus Rhizosphere	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFDRAHDRGDNLAGYEVKKCEKKSGSYD*
Ga0075434_1003522701	3300006871	Populus Rhizosphere	AVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD*
Ga0075434_1025860821	3300006871	Populus Rhizosphere	QTILLLGTILAVAMVGIANSNARVYAGNGDYDTGDDHINWKKFKNSNTYADANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0075424_1020489821	3300006904	Populus Rhizosphere	AMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD*
Ga0075424_1024864952	3300006904	Populus Rhizosphere	LGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYQDADKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYDEALRPVTKCFNPIFFVEILNDLSLITDT
Ga0075419_107929781	3300006969	Populus Rhizosphere	MNKKQSMKTFLVLGTIVAVAMIGITRSNVRLYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*EVLTSVLSAFTTIFFSFFIVEILYMFNH
Ga0066710_1003716212	3300009012	Grasslands Soil	LGTIFAVGMIGLTSSTNQVFAGKDGYGNNDDHINWKKFKNSNTYDDADKKTQKCFDRAHDRGDNLAGYEVQKCEDKPKSYD
Ga0075418_102539711	3300009100	Populus Rhizosphere	IMNKKQSVKTFLVLGTIVAVAMIGISSSNASVYADKYGDDHINWKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD*
Ga0075418_126581281	3300009100	Populus Rhizosphere	MNKKQSMKTFLVLGTIVAVAMIGITSSNARLYAGGYGNDDDINWKKFKNSNTYDDANKKAQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0114129_103925003	3300009147	Populus Rhizosphere	GTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD*
Ga0114129_103947544	3300009147	Populus Rhizosphere	GTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFDRAHDRGDNLAGYEVKKCEKKSGSYD*
Ga0114129_126201881	3300009147	Populus Rhizosphere	VAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYQDADKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD*
Ga0114129_130539782	3300009147	Populus Rhizosphere	GITSSNARLYAGGYGNDDDINWKKFKNSNTYDDANKKAQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0111538_103783354	3300009156	Populus Rhizosphere	ISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFDRAHDRGDNLAGYEVKKCEKKSGSYD*
Ga0111538_136663181	3300009156	Populus Rhizosphere	ISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD*
Ga0075423_125718281	3300009162	Populus Rhizosphere	MIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD*
Ga0105071_10623161	3300009808	Groundwater Sand	MLGTLVAVGMIGLTSNTNQVFAGKDGYDNDDDHISWKKFKNSNTYDDADKKTQKCFERAHDRGDNLAGYEVEKCEDKPKSYD*
Ga0105070_10489961	3300009815	Groundwater Sand	MLGTLVAVGMIGLTSNTNQVFAGKDGYDNDDDHISWKKFKNSNTYDDADKKTQKCFERAHDRGDNLAGYEVEKCEDKPKSY
Ga0105064_11436451	3300009821	Groundwater Sand	MLGTLVAVGMIGLTSSNTPVFAGKDGYDNDDDHISWKKFKNSNTYDDADKKTQKCFERAHDRGDNLAGYEVEKCEDKPKSYD
Ga0134088_104244721	3300010304	Grasslands Soil	MNKIQSIKTFLVLGTIVAVAMIGLTSSNARVYAGGYGNDDDINWKKFKNSNTYDDANKKTEKCFERAHDRGDNLAG
Ga0134111_100857332	3300010329	Grasslands Soil	MNKIQSIKTFLVLGTIVAVAMIGLTSSNARVYAGGYGNDDDISWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0134111_100872961	3300010329	Grasslands Soil	MNKTQSIKTSLILGTIFAVGMIGLTSSTNPVFAGKDGYGNNDDHINWKKFKNSNTYDDADKKTQKCFDRAHDRGDNLAGYEVQKCEDKPKSYD*
Ga0134080_102310711	3300010333	Grasslands Soil	KQSMKAFLVLGTIVAVAMIGITSSNARVYAGGYGNDDDISWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0134071_100748804	3300010336	Grasslands Soil	MIGLTSSTNQVFAGKDGYGNNDDHINWKKFKNSNTYDDADKKTQKCFDRAHDRGDNLAGYEVQKCEDKPK
Ga0134071_100923881	3300010336	Grasslands Soil	MNKKQSMKTFLVLGTIVAVAMIGITSSNARVYAGGYGNDDDISWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVKKCEDKPGSYD*
Ga0137365_100012658	3300012201	Vadose Zone Soil	MNKTQSIKTSLILGTIFAVGMIGLTSSTNLVFAGKDGYGNNDDHINWKKFKNSNTYDDADKKTQKCFDRAHDRGDNLAGYEVQKCEDKPKSYD*
Ga0137374_100042866	3300012204	Vadose Zone Soil	MNKIQSIKTFLVLGTIVAVAMIGLTSSNARVYTGGYGNDDDINWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0137367_100052498	3300012353	Vadose Zone Soil	MNKIQSIKTFLVLGTIVAVAMIGLTSSNARVYAGGYGNDDDINWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0137367_104538962	3300012353	Vadose Zone Soil	MNKTQSIKTSLILGTIFAVGMIGLTSSTNQVFAGKDGYGNNDDHINWKKFKNSNTYDDADKKTQKCFDRAHDRGDNLA
Ga0134059_13363242	3300012402	Grasslands Soil	MIGLTSSNARVYAGGYGNDDDINWKKFKNSNTYDDANKKTEKCFERAHDRGDNLAGYEVKKCEDK
Ga0134077_100434882	3300012972	Grasslands Soil	MNKIQSIKTFLVLGTIVAVAMIGLTSSNARIYAGGYGNDDDINWKKFKNSNTYDDANKKTEKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0134077_100560142	3300012972	Grasslands Soil	MNKTQSIKTSLILGTIFAVGMTGLTSSTNQVFAGKDGYGNNDDHINWKKFKNSNTYDDADKKTQKCFDRAHDRGDNLAGYEVQKCEDKPKSYD*
Ga0134075_104344351	3300014154	Grasslands Soil	MNKTQSIKTSLILGTIFAVGMIGLTSSTNQVFAGKDGYGNNDDHINWKKFKNSNTYDNADKKTQKCFERAHDRGDNLAGYEVKKCEDKPGSYD*
Ga0134089_101320271	3300015358	Grasslands Soil	MNKKQSMKAFLVLGTIVAVAMIGITSSNAHVYAGGYGNDDDISWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD*
Ga0132256_1003157512	3300015372	Arabidopsis Rhizosphere	MNKNRSIQTILLLGTILAVAMVGIAGSNARVYAGNGGYDAGDNNINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKNCEKDSGY*
Ga0184605_100058183	3300018027	Groundwater Sediment	MNKKQSMKAFLVLGTIVAVAMIGITSGNVRVYAGGYGNDDDISWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD
Ga0184605_100077783	3300018027	Groundwater Sediment	MNKIQSIKTFLVLGTIVAVAMTGLFSSNAYLYAKGYGDNDDHIDWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD
Ga0184608_100638931	3300018028	Groundwater Sediment	MNKIQSIKTFLVLGTIVAVAMTGLFSSNAYLYAKGYGDNDDHIDWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYDXEASRPVTKCFNTIFFF
Ga0184634_100006692	3300018031	Groundwater Sediment	MNKIQSVKTLLVLGTIVAVAMIGLTSSNVRVYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYD
Ga0184620_100004497	3300018051	Groundwater Sediment	MNKIQSVKTLLVLGTIVAVAMIGLTSSNVRVYAGGYGNDDDINWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYD
Ga0184620_100076631	3300018051	Groundwater Sediment	MNKTQSIKTFLLLGTIVAVGMIGLTSSTNHVFAGKNGYDNNDDHINWKQFKNSNTYDDADKKTQKCFERAHDRGDNLAGYEVEKCENKPKSYD
Ga0184638_100008912	3300018052	Groundwater Sediment	MNKIQSVKTLLVLGTIVAVAMIGLTSSNARVYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYD
Ga0184619_102490541	3300018061	Groundwater Sediment	MNKKQSMKTFLVLGTIVAVAMIGITSSNARLYAGGYGNDDDINWKKFKNSNTYEDANKKSQKCFERAHDRGDNLAGYEVEKCEDKPGSYDXEVLRSVLSAFTTIFFPFLL
Ga0184611_10142543	3300018067	Groundwater Sediment	MNKKQSMKAFLVLGTIVAVAMIGITSGNVRVYAGGYGNDDDISWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCED
Ga0184635_100648591	3300018072	Groundwater Sediment	MNKIQSVKTFLVLGTIVAVAMIGLTSSNARVYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYD
Ga0184635_101030701	3300018072	Groundwater Sediment	MNKIQSIKTFLVLGTIVAVAMTGLFSSNAYLYAKGYGDNDDHIDWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYDXEASRPVTKCFNTIFFCRNTLHVLIX
Ga0184624_100840942	3300018073	Groundwater Sediment	MNKIQSVKTLLVLGTIVAVAMIGLTSSNVRVYAGGYGNDDDINXKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYDXEVLRPASN
Ga0184624_101161161	3300018073	Groundwater Sediment	MNKKQSMKAFLVLGTIVAVAMIGITSGNVRVYAGGYGNDDDISWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGY
Ga0184624_103714222	3300018073	Groundwater Sediment	MNKIQSIKTFLVLGTIVAVAMTGLFSSNAYLYAKGYGDNDDHIDWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYDXEVLRPASN
Ga0184624_104438901	3300018073	Groundwater Sediment	LGTIVAVAMIGLTSSNVRVYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYDXEVLWPVTKCIHHNFFSFFIVVILYMFYYX
Ga0184633_104784911	3300018077	Groundwater Sediment	SSNVRVYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYDXEVLRPASN
Ga0184612_103060172	3300018078	Groundwater Sediment	LVLGTIVAVAMIGLTSSNARVYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYD
Ga0184625_103555301	3300018081	Groundwater Sediment	MNKIQSVKTLLVLGTIVAVAMIGLTSSNVRVYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYDXEVLRPASN
Ga0193704_10417072	3300019867	Soil	MNKIQSVKTLLVLGTIVAVAMIGLTSSNARVYAGGYGNDDDINWKKFKNSNTFDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYDXEVLRPASN
Ga0193710_10015683	3300019998	Soil	MNKTQSIKTFLLLGTIVAVGMIGLTSSTNHVFAGKNGYDNNDDHINWKKFKNSNTYDDADKKTQKCFERAHDRGDNLAGYEVEKCENKPKSYD
Ga0193721_10579721	3300020018	Soil	MNKTQSIKTSLILGTIFAVGMIGLTSSTNQVFAGKDGYGNNDDHINWKKFKNSNTYDDADKKTQKCFDRAHDRGDNLAGYEVQKCEDKPKSYDXELLEQVLK
Ga0193719_100097762	3300021344	Soil	MNKTQSIKTFLLLGTIVAVGMIGLTSSTNHVFAGKNGYDNNDDHINWKKFKNSSTYDDADKKTQKCFERAHDRGDNLAGYEVEKCENKPKSYD
Ga0222624_16255951	3300021951	Groundwater Sediment	KTFLVLGTIVAVAMTGLFSSNAYLYAKGYGDNDDHIDWKKYKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYDXEASRPVTKCFNTIFFCRNTLHVLIX
Ga0209470_10063824	3300026324	Soil	MNKKQSMKAFLVLGTIVAVAMIGITSSNARVYAGGYGNDDDISWKKFKNSNTYEDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD
Ga0209470_10148403	3300026324	Soil	MNKIQSIKTFLVLGTIVAVAMIGLTSSNARIYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYD
Ga0209157_10017424	3300026537	Soil	MNKTQSIKTSLILGTIFAVGMIGLTSSTNQVFAGKDGYGNNDDHINWKKFKNSNTYDDADKKTQKCFDRAHDRGDNLAGYEVQKCEDKPKSYD
Ga0209157_11066593	3300026537	Soil	MNKIQSIKTFLVLGTIVAVAMIGLTSSNARIYAGGYGNDDDINWKKFKNSNTYDDANKKTEKCFERAHDRGDNLAGYEVKKCEDKSGSYDXEVLRPVTKCIHHNFSSFFIVEILYMFYYX
Ga0208709_1013942	3300026693	Soil	TIIAVAMIGITSSNARLYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAQDRGDNLAGYEVEKCEHKSGSYD
Ga0207479_1000733	3300026973	Soil	MNKKQSMKTFLVLGTIIAVAMIGITSSNARLYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAQDRGDNLAGYEVEKCEHKSGSYD
Ga0209845_10053382	3300027324	Groundwater Sand	MLGTLVAVGMIGLTSNTNQVFAGKDGYDNDDDHISWKKFKNSNTYDDADKKTQKCFERAHDRGDNLAGYEVEKCEDKPKSYD
Ga0209854_10682841	3300027384	Groundwater Sand	MLGTLVAVGMIGLTSNTNQVFAGKDGYDNDDDHISWKKFKNSNTYDDADKKTQKCFERAHDRGDNLAGYEVEKCEDKPKSYDXELLE
Ga0208890_10025693	3300027523	Soil	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINYKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEKKSGSYN
Ga0207981_10581981	3300027560	Soil	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINYKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEKKSGSYNXEALRPVTKCIHHNFFSFFL
Ga0209887_10408241	3300027561	Groundwater Sand	MYDDFGLFMMNKTRSIKAFLMLGTVVAVGMIGLTSSNTPVFAGKDGYDNDDDHISWKKFKNSNTYDDADKKTQKCFERAHDRGDNLAGYEVEKCEDKPKSYDXELLEQVPK
Ga0209874_11076871	3300027577	Groundwater Sand	SIKAFLMLGTVVAVGMIGLTSSNTPVFAGKDGYDNDDDHISWKKFKNSNTYDDADKKTQKCFERAHDRGDNLAGYEVEKCEDKPKSYDXELLEQVPK
Ga0209814_100515301	3300027873	Populus Rhizosphere	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD
Ga0209814_100619903	3300027873	Populus Rhizosphere	MNKKQSMKTFLVLGTIVAVAMIGITSSNVRLYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVEKCEDKPGSYD
Ga0209382_100052171	3300027909	Populus Rhizosphere	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFDRAHDRGDNLAGYEVKKCEKKSGSYD
Ga0209860_10007583	3300027949	Groundwater Sand	MNKKQSMQTLLILGTVLSIGMIGIAGANIPLYAGEGYDNDDDHINWKKFKNSNTYDDADKKTQKCFERAHDRGDNLAGYEVEKCEDKPKSYD
Ga0307290_100166522	3300028791	Soil	MNKIQSIKTFLVLGTIVAVAMTGLFSSNAYLYAKGYGDNDDHIDWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKKCEDKSGSYD
Ga0307304_102201261	3300028885	Soil	MNKIQSVKTLLVLGTIVAVAMIGLTSSNARVYAGGYGNDDDINWKKFKNSNTYDDANKKTQKCFERAHDRGDNLAGYEVKNCEEDSGYGKDGN
Ga0307469_117970021	3300031720	Hardwood Forest Soil	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDDANKKTQKCFERAHDRGDNLAGYEVKKCEKKSGSYDXE
Ga0307468_1001592191	3300031740	Hardwood Forest Soil	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFERAHDRGDNLAGYEVKKCEKKSGSYDXEALRPVTKCIHHNFFPFFCRKTLNVLSLITDT
Ga0307470_113555541	3300032174	Hardwood Forest Soil	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFERAHDRGDNLAGYEVKKCEK
Ga0307472_1010926571	3300032205	Hardwood Forest Soil	MNKKQSVKTFLVLGTIVAVAMIGISSSNASVYAGKYGDDHINWKKFKNSNDYDGADKKTQKCFERAHDRGDNLAGYEVKKCEHKSGSYD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F090599

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences