Metagenome Family F090591

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F090591
Family Type	Metagenome
Number of Sequences	108
Average Sequence Length	89 residues
Representative Sequence	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPYN
Number of Associated Samples	86
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.44 %
% of genes near scaffold ends (potentially truncated)	41.67 %
% of genes from short scaffolds (< 2000 bps)	82.41 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (75.926 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (17.593 % of family members)
Environment Ontology (ENVO)	Unclassified (41.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.99% β-sheet: 38.20% Coil/Unstructured: 52.81%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00291	PALP	10.19
PF02586	SRAP	8.33
PF04391	DUF533	5.56
PF12681	Glyoxalase_2	3.70
PF11578	DUF3237	2.78
PF00144	Beta-lactamase	2.78
PF13537	GATase_7	1.85
PF12840	HTH_20	1.85
PF01966	HD	1.85
PF00440	TetR_N	1.85
PF14588	YjgF_endoribonc	0.93
PF03573	OprD	0.93
PF14015	DUF4231	0.93
PF13451	zf-trcl	0.93
PF02594	DUF167	0.93
PF13428	TPR_14	0.93
PF13673	Acetyltransf_10	0.93
PF02537	CRCB	0.93
PF00135	COesterase	0.93
PF14060	DUF4252	0.93
PF00805	Pentapeptide	0.93
PF16576	HlyD_D23	0.93
PF01546	Peptidase_M20	0.93
PF11158	DUF2938	0.93
PF08238	Sel1	0.93
PF12200	DUF3597	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	8.33
COG2979	Uncharacterized membrane protein YebE, DUF533 family	Function unknown [S]	5.56
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	2.78
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	2.78
COG2367	Beta-lactamase class A	Defense mechanisms [V]	2.78
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	0.93
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.93
COG1872	Uncharacterized conserved protein YggU, UPF0235/DUF167 family	Function unknown [S]	0.93
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.93 %
Unclassified	root	N/A	24.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.93 %
Unclassified	root	N/A	24.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.93 %
Unclassified	root	N/A	24.07 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.41 %
Unclassified	root	N/A	24.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	31.48 %
Unclassified	root	N/A	24.07 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	30.56 %
Unclassified	root	N/A	24.07 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.63 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.93 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	30.56 %
Unclassified	root	N/A	24.07 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Xanthomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae	30.56 %
Unclassified	root	N/A	24.07 %
Povalibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter	0.93 %
Caenimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caenimonas	0.93 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Xanthomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	30.56 %
Unclassified	root	N/A	24.07 %
Caenimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caenimonas → Caenimonas soli	0.93 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	0.93 %
unclassified Mycobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → unclassified Mycobacteriaceae	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Xanthomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	30.56 %
Unclassified	root	N/A	24.07 %
Mycobacteriaceae bacterium 1482268.1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → unclassified Mycobacteriaceae → Mycobacteriaceae bacterium 1482268.1	0.93 %
Caenimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caenimonas → Caenimonas soli	0.93 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	0.93 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.93 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8877977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1135	Open in IMG/M
2088090015\|GPICI_8925344	Not Available	1153	Open in IMG/M
2228664021\|ICCgaii200_c1107250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	606	Open in IMG/M
2228664021\|ICCgaii200_c1107742	All Organisms → cellular organisms → Bacteria → Proteobacteria	2139	Open in IMG/M
2228664021\|ICCgaii200_c1107866	All Organisms → cellular organisms → Bacteria → Proteobacteria	2005	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10815407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	571	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10868624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	676	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11097556	All Organisms → cellular organisms → Bacteria → Proteobacteria	1216	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101612057	All Organisms → cellular organisms → Bacteria → Proteobacteria	1824	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101612191	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300000559\|F14TC_104819809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	654	Open in IMG/M
3300000890\|JGI11643J12802_11477139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	892	Open in IMG/M
3300000956\|JGI10216J12902_115646301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	2292	Open in IMG/M
3300003267\|soilL1_10028755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5276	Open in IMG/M
3300003319\|soilL2_10162938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1659	Open in IMG/M
3300003324\|soilH2_10286004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1105	Open in IMG/M
3300003324\|soilH2_10325136	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300004114\|Ga0062593_100034154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	2947	Open in IMG/M
3300004114\|Ga0062593_100834584	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300004463\|Ga0063356_100125068	All Organisms → cellular organisms → Bacteria → Proteobacteria	2866	Open in IMG/M
3300005093\|Ga0062594_100339981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1171	Open in IMG/M
3300005330\|Ga0070690_100836635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	716	Open in IMG/M
3300005331\|Ga0070670_100184762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → unclassified Mycobacteriaceae → Mycobacteriaceae bacterium 1482268.1	1810	Open in IMG/M
3300005347\|Ga0070668_100512503	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300005456\|Ga0070678_100993463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	771	Open in IMG/M
3300005459\|Ga0068867_101160531	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300005471\|Ga0070698_101701963	Not Available	583	Open in IMG/M
3300005530\|Ga0070679_100140384	All Organisms → cellular organisms → Bacteria → Acidobacteria	2396	Open in IMG/M
3300005577\|Ga0068857_100032535	All Organisms → cellular organisms → Bacteria → Proteobacteria	4612	Open in IMG/M
3300005834\|Ga0068851_10534974	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005840\|Ga0068870_10091817	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300005983\|Ga0081540_1067413	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300006049\|Ga0075417_10022695	All Organisms → cellular organisms → Bacteria → Proteobacteria	2520	Open in IMG/M
3300006196\|Ga0075422_10303951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	684	Open in IMG/M
3300006844\|Ga0075428_100003768	All Organisms → cellular organisms → Bacteria → Proteobacteria	16612	Open in IMG/M
3300006844\|Ga0075428_100148399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2548	Open in IMG/M
3300006846\|Ga0075430_101639857	Not Available	528	Open in IMG/M
3300006847\|Ga0075431_100574820	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300006847\|Ga0075431_101456473	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006854\|Ga0075425_102707347	Not Available	547	Open in IMG/M
3300006876\|Ga0079217_10066267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1511	Open in IMG/M
3300006876\|Ga0079217_11062910	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300006904\|Ga0075424_102296116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	567	Open in IMG/M
3300007004\|Ga0079218_10352829	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300007004\|Ga0079218_10593310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1009	Open in IMG/M
3300007004\|Ga0079218_10787146	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300007004\|Ga0079218_10787818	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300007076\|Ga0075435_101459734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	600	Open in IMG/M
3300009094\|Ga0111539_11800415	Not Available	710	Open in IMG/M
3300009100\|Ga0075418_12560153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	557	Open in IMG/M
3300009147\|Ga0114129_11478259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	836	Open in IMG/M
3300009148\|Ga0105243_11334542	Not Available	736	Open in IMG/M
3300009156\|Ga0111538_10510376	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300009162\|Ga0075423_13185568	Not Available	503	Open in IMG/M
3300010371\|Ga0134125_11678971	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300010399\|Ga0134127_10072646	All Organisms → cellular organisms → Bacteria → Proteobacteria	2925	Open in IMG/M
3300010400\|Ga0134122_10146305	All Organisms → cellular organisms → Bacteria → Proteobacteria	1917	Open in IMG/M
3300011119\|Ga0105246_10177784	All Organisms → cellular organisms → Bacteria → Proteobacteria	1636	Open in IMG/M
3300012902\|Ga0157291_10084200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	832	Open in IMG/M
3300014326\|Ga0157380_10314591	Not Available	1449	Open in IMG/M
3300014326\|Ga0157380_12072817	Not Available	631	Open in IMG/M
3300015077\|Ga0173483_10202216	Not Available	915	Open in IMG/M
3300015372\|Ga0132256_100324594	Not Available	1629	Open in IMG/M
3300015373\|Ga0132257_103673658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	558	Open in IMG/M
3300015374\|Ga0132255_100745098	Not Available	1458	Open in IMG/M
3300018422\|Ga0190265_10714805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1123	Open in IMG/M
3300018422\|Ga0190265_12156838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	660	Open in IMG/M
3300018466\|Ga0190268_10102343	All Organisms → cellular organisms → Bacteria → Proteobacteria	1335	Open in IMG/M
3300018466\|Ga0190268_10787526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	717	Open in IMG/M
3300018469\|Ga0190270_13061330	Not Available	529	Open in IMG/M
3300019361\|Ga0173482_10021809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1828	Open in IMG/M
3300019361\|Ga0173482_10050350	All Organisms → cellular organisms → Bacteria → Proteobacteria	1350	Open in IMG/M
3300019362\|Ga0173479_10899327	Not Available	501	Open in IMG/M
3300022892\|Ga0247753_1031017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	636	Open in IMG/M
3300025900\|Ga0207710_10628449	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300025907\|Ga0207645_10652166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	715	Open in IMG/M
3300025908\|Ga0207643_10016202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4064	Open in IMG/M
3300025921\|Ga0207652_10739476	Not Available	876	Open in IMG/M
3300025925\|Ga0207650_11870051	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300025945\|Ga0207679_11007018	Not Available	764	Open in IMG/M
3300025986\|Ga0207658_10039052	All Organisms → cellular organisms → Bacteria → Proteobacteria	3424	Open in IMG/M
3300026088\|Ga0207641_12024643	Not Available	577	Open in IMG/M
3300026118\|Ga0207675_100146670	All Organisms → cellular organisms → Bacteria → Proteobacteria	2244	Open in IMG/M
3300027873\|Ga0209814_10079277	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300027880\|Ga0209481_10033102	All Organisms → cellular organisms → Bacteria → Proteobacteria	2346	Open in IMG/M
3300027886\|Ga0209486_10987089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	565	Open in IMG/M
3300027909\|Ga0209382_10010145	All Organisms → cellular organisms → Bacteria	11767	Open in IMG/M
3300027909\|Ga0209382_10879468	Not Available	946	Open in IMG/M
3300028379\|Ga0268266_11661606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	614	Open in IMG/M
3300028380\|Ga0268265_11011609	Not Available	821	Open in IMG/M
3300031184\|Ga0307499_10100255	Not Available	792	Open in IMG/M
3300031548\|Ga0307408_100016750	All Organisms → cellular organisms → Bacteria → Proteobacteria	4899	Open in IMG/M
3300031548\|Ga0307408_100055628	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300031548\|Ga0307408_101623351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	614	Open in IMG/M
3300031562\|Ga0310886_10489259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	740	Open in IMG/M
3300031824\|Ga0307413_11297757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	637	Open in IMG/M
3300031847\|Ga0310907_10209182	Not Available	937	Open in IMG/M
3300031852\|Ga0307410_11651699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Caenimonas → Caenimonas soli	567	Open in IMG/M
3300031858\|Ga0310892_10555778	Not Available	772	Open in IMG/M
3300031901\|Ga0307406_10628127	Not Available	889	Open in IMG/M
3300031908\|Ga0310900_10182597	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300031911\|Ga0307412_11207497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	677	Open in IMG/M
3300031911\|Ga0307412_12029225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	533	Open in IMG/M
3300031944\|Ga0310884_11047557	Not Available	508	Open in IMG/M
3300032004\|Ga0307414_10924032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	801	Open in IMG/M
3300032005\|Ga0307411_10385479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → unclassified Xanthomonadaceae → Xanthomonadaceae bacterium	1154	Open in IMG/M
3300032013\|Ga0310906_10083707	Not Available	1698	Open in IMG/M
3300033551\|Ga0247830_11473855	Not Available	544	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.93%
Environmental	Environmental	49.07%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.93%
Terrestrial	Environmental → Terrestrial	49.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.04%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	31.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.41%
Loam	Environmental → Terrestrial → Soil → Loam	4.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	31.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.41%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	9.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.63%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	3.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01824210	2088090015	Soil	MPAKHQPPVGTLAFLAECGRTVYIVCNRCNRFVVAKLDEIAQRVGWRANVQETGKRLRCKECNYVGAKITVERPQVGRSVCPRCLRPYN
GPICI_00280880	2088090015	Soil	VPAKHPPPPGTLAYLAECGRTVYIVCDRCNRFVVAKLQEIAQHVGWRTNAKDAGKRLRCKECKHVGATITVERPQVGQRVCPRCLRPYY
ICCgaii200_11072502	2228664021	Soil	VPAKHPAPPGTLAYLAECGRTVYIVCNRCNRFVVAELQQIAQHIGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY
ICCgaii200_11077422	2228664021	Soil	VPAKHPPPPGTLAYLAECGRTVYIVCNRCNRFVVAKLQEIAKRVGWRTNAQEAGKRLRCKECKHVGATITIERPQSGQRVCPRCLRPFF
ICCgaii200_11078661	2228664021	Soil	MPAKHQPPVGTLAYLAECGRTVYIVCNRCNRFVVAKLDEIAQRVGWRANVLETGKRLRCKECNYVGAKITVERPQVGRSVCPRCLRPYN
ICChiseqgaiiFebDRAFT_108154071	3300000363	Soil	VPAKHPAPPGTLAYLAECGRTVYIVCNRCNRFVVAELQQIAQHIGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY*
ICChiseqgaiiFebDRAFT_108686242	3300000363	Soil	VPAKHPPPPGTLAYLAECGRTVYIVCDRCNRFVVAKLQEIAQHVGWRTNAKDAGKRLRCKECKHVGATITVERPQVGQRVCPRCLRPYY*
ICChiseqgaiiFebDRAFT_110975562	3300000363	Soil	VPAKHPPPPGTLAYLAECGRTVYIVCNRCNRFVVAKLQEIAKRVGWRTNAQEAGKRLRCKECKHVGATITIERPQSGQRVCPRCLRPFF*
INPhiseqgaiiFebDRAFT_1016120575	3300000364	Soil	MPAKHPPPVGTLAXLAXCGRTVYIVCNRCNRFVVAQLHDIAKHVGWRANAQEAGKKXRCKECKHVGAKITIERPQVGQRVCPRCLRPYY*
INPhiseqgaiiFebDRAFT_1016121912	3300000364	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQEAGKKLRCKECKHVGAKITIERPQV
F14TC_1048198093	3300000559	Soil	VPAKHPPPVGTLAFLAECGRTVYIVCNHCNRFVVAKLQEIAKHVGWRTNVQEAGKRLRCKECNYLGAKITIERPQVGQRVCPRC
JGI11643J12802_114771392	3300000890	Soil	TLAYLAECGRTVYIVCNRCNRFVVAELQQIAQHIGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY*
JGI10216J12902_1156463013	3300000956	Soil	VPAKHPPPVGTLAFLAECGHTVYVVCNHCNRFVVAQLQEIARHVGWRANVQEAGKRLRCKECNYVGAKITVERPQAGQRVCPRCLRPYY*
soilL1_100287554	3300003267	Sugarcane Root And Bulk Soil	VPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQETGRRMRCKECKYVGAKITIERPQVGQRVCPRCLRPY*
soilL2_101629383	3300003319	Sugarcane Root And Bulk Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFTVAKLEEIARRVGWRANVQETGKRLRCKECNYVGAKITVERPQVGRSVCPRCLRPYY*
soilH2_102860041	3300003324	Sugarcane Root And Bulk Soil	KHPPPVGTLAFLAECGRTVYIVCNRCNRFTVAKLEEIARRVGWRANVQETGKRLRCKECNYVGAKITVERPQVGRSVCPRCLRPYY*
soilH2_103251362	3300003324	Sugarcane Root And Bulk Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQETGRRMRCKECKYVGAKITIERPQVGQRVCPRCLRPY*
Ga0062593_1000341542	3300004114	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQRVCPRCLRPYY*
Ga0062593_1008345842	3300004114	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT*
Ga0063356_1001250682	3300004463	Arabidopsis Thaliana Rhizosphere	MPAKHQPPVGTLAYLAECGRTVYIVCNRCNRFVVAKLDEIAQRVGWRANVLETGKRLRCKECNYVGAKITVERPQVGRSVCPRCLRPYN*
Ga0062594_1003399812	3300005093	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQEIAQHVGWRANAQEAGKKLRCKECKHVGAKITTERPQVGQRVCPRCLRPFN*
Ga0070690_1008366353	3300005330	Switchgrass Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQRVCPRCLRPY
Ga0070670_1001847623	3300005331	Switchgrass Rhizosphere	PVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQRVCPRCLRPYY*
Ga0070668_1005125031	3300005347	Switchgrass Rhizosphere	VMPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT*
Ga0070678_1009934631	3300005456	Miscanthus Rhizosphere	MPAKHQPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLEEIAQRVGWRANVQETGKRLRCKECNYVGAKITVERPQVGRSVCPRCLRPYY*
Ga0068867_1011605311	3300005459	Miscanthus Rhizosphere	AKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT*
Ga0070698_1017019631	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAKLEEIAQRVGWRANVQEAGKRLRCKECNYVGAKITIERPQVGRSVCP
Ga0070679_1001403844	3300005530	Corn Rhizosphere	MTSASEAPTAIGTLAFLAECGRTVYIVCNRCNRFVVAHLQDIARHVGWRANVQEAGKRLRCKECNYVGAKITIERPPVGRSVCPRCLRPYN*
Ga0068857_1000325351	3300005577	Corn Rhizosphere	NGAMPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT*
Ga0068851_105349741	3300005834	Corn Rhizosphere	AVSPSRVRSCSSASACTASNGAMPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT*
Ga0068870_100918174	3300005840	Miscanthus Rhizosphere	PPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT*
Ga0081540_10674133	3300005983	Tabebuia Heterophylla Rhizosphere	MPAKHPPPVGSLAFLAECGRTVYIVCNRCNRFVVARLEEIAQRVGWRANVQETGKRLRCKECNYVGAKITVERPQVGRSVCPRCLRPYN*
Ga0075417_100226951	3300006049	Populus Rhizosphere	PVYRYSHEEPRVPAKHPPPPGTLAYLAECGRTVYIVCNRCNRFVVAKLQEIAKRVGWRTNAQEAGKRLRCKECKHVGATITIERPQSGQRVCPRCLRPFF*
Ga0075422_103039512	3300006196	Populus Rhizosphere	MPAKHQPPVGTLAFLAECGRTVYIVCNRCNRFVVAKLDEIAQRVGWRANVQETGKRLRCKECNYVGAKITVERPQVGRSVCPRCLRPYN*
Ga0075428_10000376810	3300006844	Populus Rhizosphere	MPAKHPPPVGTLAFLAECGKTVYVVCNHCNRFVVAQLEEIAKRVGWRSNVQDAGKRLRCKECKYVGAKITVERPQVGQRVCPRCLRPYD*
Ga0075428_1001483994	3300006844	Populus Rhizosphere	VPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVARLQDIAQHVGWRATAQEAGKKLRCKECNYVGAKITIERPRVGQRVCPRCLRPFD*
Ga0075430_1016398572	3300006846	Populus Rhizosphere	MPARHPPLAGTLAELAECGRTVYVVCNGCGRFIVAPLFQFAQRVGWRAFARDIGGRLRCVECHHLGARITLERPQVGRAVCPRCGRPYR*
Ga0075431_1005748203	3300006847	Populus Rhizosphere	YLAECGRTVYIVCNRCNRFVVAKLDEIAQRVGWRANVLETGKRLRCKECNYVGAKITVERPQVGRSVCPRCLRPYN*
Ga0075431_1014564732	3300006847	Populus Rhizosphere	VVPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRATAQEAGKRLRCKECNYVGAKITVERPRVGQRVCPRCLRPFD*
Ga0075425_1027073471	3300006854	Populus Rhizosphere	TLAFLAECGRTVYIVCNRCDRFVVAQLQEIAQHVGWRANAQEAGKKLRCKECKHVGAKITTERPQVGQRVCPRCLRPYN*
Ga0079217_100662673	3300006876	Agricultural Soil	VPAKHPPPPGTLAFLAECGRTVYIVCNRCNRFVVAELQNIAEHVGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY*
Ga0079217_110629101	3300006876	Agricultural Soil	VPAKHPAPPGTLAYLAECGRTVYIVCNRCNRFVVAKLQEIARHVGWRTNAQEAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLR
Ga0075424_1022961162	3300006904	Populus Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQRVCPRCLRPFY*
Ga0079218_103528292	3300007004	Agricultural Soil	VPAKHPAPPGTLAYLAECGRTVYIVCNRCNRFVVAKLQEIARHVGWRTNAQEAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY*
Ga0079218_105933102	3300007004	Agricultural Soil	VPAKHPPPPGTLAFLAECGRTVYIVCNRCNRFVVAELQNIAQHVGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY*
Ga0079218_107871461	3300007004	Agricultural Soil	PVPAKHPAPPGTLAYLAECGRTVYIVCNRCNRFVVAELQLVAQHVGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY*
Ga0079218_107878181	3300007004	Agricultural Soil	VPAKHPAPPGTLAYLAECGRTVYIVCNRCNRFVVAQLQEIAQHIGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY*
Ga0075435_1014597342	3300007076	Populus Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQEIAQHVGWRANAQEAGKKLRCKECKHVGAKITTERPQVGQRVCPRCLRPYN*
Ga0111539_118004152	3300009094	Populus Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFN*
Ga0075418_125601531	3300009100	Populus Rhizosphere	MPAKHQPPVGTLAYLAECGRTVYIVCNRCNRFVVAKLDEIAQRVGWRANVLETGKRLRCKECNYVGAKITVERPQVGRSVCP
Ga0114129_114782592	3300009147	Populus Rhizosphere	VPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAKLQDIAKHVGWRATAQEAGKRLRCKECNYVGAKITIERPRVGQRVCPRCLRPFD*
Ga0105243_113345421	3300009148	Miscanthus Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQEIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQ
Ga0111538_105103763	3300009156	Populus Rhizosphere	PPPPGTLAYLAECGRTVYIVCNRCNRFVVAKLQEIAKRVGWRTNAQEAGKRLRCKECKHVGATITIERPQSGQRVCPRCLRPFF*
Ga0075423_131855681	3300009162	Populus Rhizosphere	MPAKHQPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQEIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFN*
Ga0134125_116789712	3300010371	Terrestrial Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPYN*
Ga0134127_100726462	3300010399	Terrestrial Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITTERPQVGQRVCPRCLRPFN*
Ga0134122_101463053	3300010400	Terrestrial Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVVQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT*
Ga0105246_101777843	3300011119	Miscanthus Rhizosphere	ASACIASECVMPAKHPPPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQEIAQHVGWRANAQEAGKKLRCKECKHVGAKITTERPQVGQRVCPRCLRPFT*
Ga0157291_100842002	3300012902	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERTQVGQRVCPRCLRPYY*
Ga0157380_103145911	3300014326	Switchgrass Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQRVCP
Ga0157380_120728172	3300014326	Switchgrass Rhizosphere	ECVMPAKHPPPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITTERPQVGQRVCPRCLRPYN*
Ga0173483_102022163	3300015077	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQ
Ga0132256_1003245941	3300015372	Arabidopsis Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFD*
Ga0132257_1036736582	3300015373	Arabidopsis Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQEIAKHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPF*
Ga0132255_1007450983	3300015374	Arabidopsis Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPYN*
Ga0190265_107148052	3300018422	Soil	VPAKHPPPVGTLAFLAECGRTVYIVCNHCNRFVVAQLQDIAKHVGWRTNVKEAGKRLRCKECNYVGAKITIERPQVGQQVCPRCLRPYD
Ga0190265_121568382	3300018422	Soil	MPAKHPPAPGTLAFLAECGSTVYIVCNKCGRFTVARLQEIAERIGWRASAQEAGRKLRCKECRYLGAELTVERPQVGQHVCPRCLRPYN
Ga0190268_101023432	3300018466	Soil	VPAKHPAPPGTLAFLAECGRTVYIVCNRCNRFVVAQLQEIAQHIGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY
Ga0190268_107875262	3300018466	Soil	MPAKHPPPPGTLAYLAECGRTVYIVCNRCNRFVVAELQEIAKHVSWRANAQEAGKRMRCKDCKNVGAAITVERPQVGQRVCPRCLRPYY
Ga0190270_130613302	3300018469	Soil	VPAKHPAPPGTLAYLAECGRTVYIVCNRCNRFVVAQLQEIAQHIGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQKVC
Ga0173482_100218091	3300019361	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQEIAQHVGWRANAQEAGKKLRCKECKHVGAKITTERPQVGQRVCPRCLRP
Ga0173482_100503503	3300019361	Soil	ECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT
Ga0173479_108993272	3300019362	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT
Ga0247753_10310172	3300022892	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQRVCPRCLRPYY
Ga0207710_106284491	3300025900	Switchgrass Rhizosphere	RVRSCSSASACTASNGAMPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT
Ga0207645_106521661	3300025907	Miscanthus Rhizosphere	PHKAVSRLRARSCNSTSACIASEGVMPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQRVCPRCLRPYY
Ga0207643_100162021	3300025908	Miscanthus Rhizosphere	ASNGAMPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT
Ga0207652_107394763	3300025921	Corn Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQRVC
Ga0207650_118700511	3300025925	Switchgrass Rhizosphere	AKHSSPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT
Ga0207679_110070181	3300025945	Corn Rhizosphere	MPAKHQPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLEEIAQRVGWRANVQETGKRLRCKECNYVGAKITVERPQVGRSVCPRCL
Ga0207658_100390526	3300025986	Switchgrass Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFI
Ga0207641_120246431	3300026088	Switchgrass Rhizosphere	SASACIASECVMPAKHPPPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQEIAQHVGWRANAQEAGKKLRCKVCKHVGAKITTERPQVGQRVCPRCLRPYN
Ga0207675_1001466701	3300026118	Switchgrass Rhizosphere	PPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQEIAQHVGWRANAQEAGKKLRCKECKHVGAKITTERPQVGQRVCPRCLRPFN
Ga0209814_100792773	3300027873	Populus Rhizosphere	CNSASASIASEAVVPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVARLQDIAQHVGWRATAQEAGKKLRCKECKHVGATITIERPQSGQRVCPRCLRPFF
Ga0209481_100331023	3300027880	Populus Rhizosphere	MPAKHPPPVGTLAFLAECGKTVYVVCNHCNRFVVAQLEEIAKRVGWRSNVQDAGKRLRCKECKYVGAKITVERPQVGQRVCPRCLRPYD
Ga0209486_109870891	3300027886	Agricultural Soil	VPAKHPPPPGTLAFLAECGRTVYIVCNRCNRFVVAELQNIAQHVGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY
Ga0209382_100101455	3300027909	Populus Rhizosphere	VPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVARLQDIAQHVGWRATAQEAGKKLRCKECNYVGAKITIERPRVGQRVCPRCLRPFD
Ga0209382_108794683	3300027909	Populus Rhizosphere	MPAKHQPPVGTLAFLAECGRTVYIVCNRCNRFVVAKLDEIAQRVGWRANVQETGKRLRCKECNYVGAKITVERPQVGRSVCP
Ga0268266_116616062	3300028379	Switchgrass Rhizosphere	MPAKHQPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLEEIAQRVGWRANVQETGKRLRCKECNYVGAKITVERPQVGRSVCPRCLRPYY
Ga0268265_110116091	3300028380	Switchgrass Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCDRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITTERPQVGQRVCPR
Ga0307499_101002552	3300031184	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPY
Ga0307408_1000167503	3300031548	Rhizosphere	VPAKHPPPPGTLAFLAECGRTVYIVCNRCNRFVVAELQNIAEHVGWRANAKDASKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY
Ga0307408_1000556282	3300031548	Rhizosphere	VPSKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIARHVGWRANVQEAGKRLRCKECNYVGARITIERPQVGRRMCPRCLRPYD
Ga0307408_1016233511	3300031548	Rhizosphere	VPAKHPPPPGTLAYLAECGRTVYIVCNRCNRFVVAKLQEIATRVGWRTNAQDAGKRLRCKECKHVGATITVERPQSGQRVCPRCLRPFF
Ga0310886_104892592	3300031562	Soil	SCEPHKAVSRLRARSCNSTSACIASEGVMPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQRVCPRCLRPYY
Ga0307413_112977571	3300031824	Rhizosphere	VPAKHPPPPGTLAFLAECGRTVYIVCNRCNRFVVAELQNIAEHVGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY
Ga0310907_102091823	3300031847	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQEAGKKLRCKECKHEGAKITIERPQVGQRVCPRCLRPFN
Ga0307410_116516991	3300031852	Rhizosphere	PRRAVSPSQARSCNSASACIASNGVMPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFN
Ga0310892_105557781	3300031858	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFN
Ga0307406_106281271	3300031901	Rhizosphere	YRRSTLSRVRFAVPSKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIARHVGWRANVQEAGKRLRCKECNYVGARITIERPQVGRRMCPRCLRPYD
Ga0310900_101825973	3300031908	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFN
Ga0307412_112074972	3300031911	Rhizosphere	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAKLEEIAQRVGWRANVQEAGKRLRCKECNYVGAKITIERPQVGRSVCPRCLRPYHS
Ga0307412_120292251	3300031911	Rhizosphere	LPAKHPAPPGTLAYLAECGRTVYIVCNRCNRFVVAQLQEIAQHIGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY
Ga0310884_110475572	3300031944	Soil	SNGAMPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAQHVGWRANAQEAGKKLRCKECKHVGAKITIERPQVGQRVCPRCLRPFT
Ga0307414_109240321	3300032004	Rhizosphere	PGTLAFLAECGRTVYIVCNRCNRFVVAELQNIAEHVGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY
Ga0307411_103854791	3300032005	Rhizosphere	QYSHCGRSPVPAKHPAPPGTLAYLAECGRTVYIVCNRCNRFVVAQLQEIAQHIGWRANAKDAGKRLRCKDCKHVGATITVERPQVGQRVCPRCLRPYY
Ga0310906_100837073	3300032013	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVAQLQDIAKHVGWRANAQEAGKRLRCKECKHVGAKITIERPQVGQRVCPRCLRPFN
Ga0247830_114738551	3300033551	Soil	MPAKHPPPVGTLAFLAECGRTVYIVCNRCNRFVVASLQDIAQHVGWRANAQEAGKRLRCKECNYVGAKITIERPQVGQRVCPRCL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F090591

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences