Metagenome Family F090563

Overview

Basic Information

• Family ID: F090563
• Family Type: Metagenome
• Number of Sequences: 108
• Average Sequence Length: 38 residues
• Representative Sequence: KRILKFTLKQLLHVSVQSPSSGSVLFELAKVIVIKIIS
• Number of Associated Samples: 17
• Number of Associated Scaffolds: 108

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 8.33 %
• % of genes from short scaffolds (< 2000 bps): 12.96 %
• Associated GOLD sequencing projects: 12
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut (97.222 % of family members)
• Environment Ontology (ENVO): Unclassified (100.000 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Animal → Animal proximal gut (100.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 46.97%
  β-sheet: 0.00%
  Coil/Unstructured: 53.03%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF00078	RVT_1	1.85
PF02535	Zip	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.93

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001544|JGI20163J15578_10248929	Not Available	1148
3300001544|JGI20163J15578_10404049	Not Available	869
3300001544|JGI20163J15578_10448172	Not Available	815
3300001544|JGI20163J15578_10739977	Not Available	573
3300002125|JGI20165J26630_10264104	Not Available	835
3300002125|JGI20165J26630_10277518	Not Available	819
3300002125|JGI20165J26630_10450987	Not Available	666
3300002175|JGI20166J26741_12269325	Not Available	586
3300002501|JGI24703J35330_11694215	Not Available	1942
3300002508|JGI24700J35501_10526015	Not Available	828
3300002508|JGI24700J35501_10585276	Not Available	914
3300006226|Ga0099364_10624089	Not Available	1073
3300027891|Ga0209628_10435901	Not Available	1343
3300027960|Ga0209627_1016934	Not Available	1316

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Class

Habitat	Taxonomy	Distribution
Arthropoda	Host-Associated → Arthropoda	100.00%

Category

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Arthropoda → Digestive System	100.00%

Type

Habitat	Taxonomy	Distribution
Gut	Host-Associated → Arthropoda → Digestive System → Gut	100.00%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	97.22%
Proctodeal Segment	Host-Associated → Arthropoda → Digestive System → Gut → Proctodeal Segment	2.78%

Habitat

Habitat	Taxonomy	Distribution
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	97.22%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Proctodeal Segment → Termite Gut	2.78%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001544	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated
3300002125	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4	Host-Associated
3300002127	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3	Host-Associated
3300002175	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5	Host-Associated
3300002185	Cubitermes ugandensis P1 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P1	Host-Associated
3300002462	Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P4	Host-Associated
3300002469	Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3	Host-Associated
3300002501	Neocapritermes taracua P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P1	Host-Associated
3300002508	Microcerotermes parvus P1 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P1	Host-Associated
3300006226	Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3	Host-Associated
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated
3300027558	Cubitermes ugandensis crop segment gut microbial communities from Kakamega Forest, Kenya - Cu122C (SPAdes)	Host-Associated
3300027891	Cubitermes ugandensis P4 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P4 (SPAdes)	Host-Associated
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated
3300027960	Cubitermes ugandensis midgut segment microbial communities from Kakamega Forest, Kenya - Cu122M (SPAdes)	Host-Associated
3300027984	Cubitermes ugandensis P5 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P5 (SPAdes)	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20163J15578_102162621	3300001544	Termite Gut	MHNRVALKEILKFTLKHLLHVSVKSPSSGSVLFELAKVIVIKIIS*
JGI20163J15578_102489294	3300001544	Termite Gut	ILKFTLKHLLHVSVQLPSSGSALFGLDKVTVVKIID*
JGI20163J15578_103625052	3300001544	Termite Gut	RILKFTLKELLHVLVQSPSSGSVLFELAKVIVIKIIS*
JGI20163J15578_104040493	3300001544	Termite Gut	LQRILKFTLKQLLHVSVQSPSSGSALFELAKLIVVRIVN*
JGI20163J15578_104481723	3300001544	Termite Gut	MHKRIALKILKHTLKQLLHVSVQSPSSGSVLFELAKVIVIK
JGI20163J15578_105024001	3300001544	Termite Gut	LKKILKFTLKQLLHVSVQSPSSGSVLFELAKVIVI
JGI20163J15578_106454351	3300001544	Termite Gut	KFTLKQLLHVSVQSPSSGSVLFELAKVVVVKIFS*
JGI20163J15578_106554591	3300001544	Termite Gut	FKRILKFTLKQLLHVSVQSPSSGSVLFELAKVIVVKIIS*
JGI20163J15578_106819851	3300001544	Termite Gut	MLKFALKQLLHVSVQSPSSGRVLFELAEVIVVKIIS*
JGI20163J15578_107399772	3300001544	Termite Gut	MHGEIMKLKFTLKQLLNVSVQSPSSGSVLFELAKVKFTKIIS*
JGI20163J15578_107575891	3300001544	Termite Gut	KFTLKQLLHASVQLPPSGSVLFELAKDIVIKIIS*
JGI20163J15578_107593281	3300001544	Termite Gut	FKRILKFTLKQLLHVSVQSPSSGSVLFELAKVIVIKIIS*
JGI20163J15578_108654571	3300001544	Termite Gut	LKRMLKFTLKQLLHVSVQSPSSGSALFQLAKVVVV
JGI20163J15578_108793422	3300001544	Termite Gut	RILKFTLKQLLHVSVQSPSSGSVLFELAKVMVVQIIC*
JGI20165J26630_100174574	3300002125	Termite Gut	MLKFTLKEFLHVSVQSPSSGSVLFELNKVIVAKLIS*
JGI20165J26630_100365192	3300002125	Termite Gut	RILKFTIKQLLHVSVQSPSSGSISFEFAKVIVIKIIS*
JGI20165J26630_101148082	3300002125	Termite Gut	MLKYTLKQLLHVSVQSPSSGGVLFELAEVIIIKIIG*
JGI20165J26630_102641043	3300002125	Termite Gut	MHKSVALKRILKFTLKQLLHVSVQSPSSGSVLFELAKVIITKTVS*
JGI20165J26630_102775181	3300002125	Termite Gut	MHMRTALKRILKFTLKPLLQFSVQSPSSGSALFELAKVIVVNIIN*
JGI20165J26630_103468802	3300002125	Termite Gut	RILKFTLKQLLHVSVQSPSSGSILFELAKVTVITIIG*
JGI20165J26630_104509871	3300002125	Termite Gut	MHNRAALKKLLKFTLKQLLHFSVQSPSSGSVLFELAKVI
JGI20165J26630_104542981	3300002125	Termite Gut	ILKFTLKQLLHVSVQSPSSGSVLFELAKVVVVKIFS*
JGI20165J26630_105501742	3300002125	Termite Gut	LKFTLKQLLHVSVQSPSSGSVLFELAKITVIKIIS*
JGI20165J26630_105719421	3300002125	Termite Gut	KKILKFTFKQFLQVSWQPPSSGSALFELAKVISVKIID*
JGI20165J26630_105859172	3300002125	Termite Gut	LKFTLKQLLHVSVQSPSSGSVLFELAKVIVVQIIG*
JGI20165J26630_108146172	3300002125	Termite Gut	KFTLKQLLHVSVQSPSSGSVLFELAKVIVVKIIS*
JGI20164J26629_103407901	3300002127	Termite Gut	KFTLKQLQHVSVQSPSSGSVLFELPKVIVIKIIDAF*
JGI20164J26629_103946112	3300002127	Termite Gut	RILKFTLKQLLHVSVQSPSSWSVLFELAKVIVIKIIS*
JGI20166J26741_102370941	3300002175	Termite Gut	FKRILKFTLKQLLHVSVQSPSSGSVLFELAKVIAITIIS*
JGI20166J26741_103959271	3300002175	Termite Gut	KFTLKQLLHVSVQSPSSGSVLFELAKVIVIKIIF*
JGI20166J26741_114487705	3300002175	Termite Gut	KFTLKQLLHVSVQSPSSGSVLFELAKVTVIKIIG*
JGI20166J26741_115253781	3300002175	Termite Gut	FKRILKFTLKQLLHVSFQSPSSGSVLFELAKVIVVKIIS*
JGI20166J26741_116841253	3300002175	Termite Gut	FKRILKFTLKQLLHVSVQSSSSGSVLFELAKVIAIKIIS*
JGI20166J26741_117327501	3300002175	Termite Gut	CFKRILKFTLKQLLHVSVQSPSSGSVLFELAKVTVIKIIS*
JGI20166J26741_117488461	3300002175	Termite Gut	MHNRITFKRILKFTLKQLLHVSVQSPSSGSVLFELAKVI
JGI20166J26741_118239741	3300002175	Termite Gut	FKRILKFTLKQLLHVSVQSPSSGSVLFELAKVTVIKIIS*
JGI20166J26741_118246501	3300002175	Termite Gut	FKRILKFTLKQLLHVSVQSPSSRSVLFELAKVIAIKIIV*
JGI20166J26741_119854541	3300002175	Termite Gut	KFTLKQLLHVSVQSPSSGSVLFELAKVMVIKIII*
JGI20166J26741_119856032	3300002175	Termite Gut	FKRILKFTLKQLLHVSVQSQSSGSVLFELAKVIGIKIIS*
JGI20166J26741_120311636	3300002175	Termite Gut	KFTLKQLLHVSVQSPSSGSALFELAKVIVVKIIS*
JGI20166J26741_120851272	3300002175	Termite Gut	MAQYSCFKRILKFTLKQLLHVSVQSPSSGSVLFELATVI
JGI20166J26741_120943382	3300002175	Termite Gut	KFTLKQLLHVSVQSPSSGSVLFELAKVIVIKIIS*
JGI20166J26741_121414272	3300002175	Termite Gut	KRILKFTLKQLLHVSVQSPSSGSVLFELAKVMVVQIIC*
JGI20166J26741_121555822	3300002175	Termite Gut	LKFTLKQLLHVSVQSPSSGSVLFELAKVIVIKIFR*
JGI20166J26741_122168221	3300002175	Termite Gut	SCFKRILKFTLKQLLHVSVQSPSSGSILFELAKGIVIKIIS*
JGI20166J26741_122693251	3300002175	Termite Gut	MHKRIALKRILKFTLKRLLHVSVQSPSSGSVLFELAKVIV
JGI20163J26743_104682712	3300002185	Termite Gut	KFTSKQLLHVSVQSPSSGSALFELAKVIVVKIIN*
JGI20163J26743_105787131	3300002185	Termite Gut	ILKFTLKQLLHVSVQSPSSGSVLSELAKVIVIKIIS*
JGI20163J26743_111940201	3300002185	Termite Gut	MHNRITFKRILKFTLKQLLHVSVQSPSSGSVLFELAKVIV
JGI24702J35022_104777171	3300002462	Termite Gut	MLKFTLKQLLHVSVQSSSSGSVLFELAKVIIVKKSVKIHH
JGI24702J35022_105389842	3300002462	Termite Gut	LKRMLKFTLKQFPHVSVQSSLSGSTLIELAKVIVVKIIC*
JGI24702J35022_108693042	3300002462	Termite Gut	PQESCFKRILKFALKQLLHVSVQSLSSGKVFFDLAKVMMIKIIN*
JGI24701J34945_101719242	3300002469	Termite Gut	DAQYSCFKRILKFTLKQLLHVSVXSPXSGXXLFELAKVIVIKIIS*
JGI24703J35330_111424911	3300002501	Termite Gut	TLKFTLKQLQRVSVQSPSSGSVSFELAKVTVVIIVNNHTDVF*
JGI24703J35330_116942151	3300002501	Termite Gut	MHKRIALKRILKFTLKQILHVSVLSPSSGSVLFELAEVTVVKIIN*
JGI24700J35501_103671771	3300002508	Termite Gut	FKRILKFTLKQLLHVSVQSPSSGSVLFELAKVVVIKIIS*
JGI24700J35501_103724222	3300002508	Termite Gut	FKRILKFTLKQLLQVSVQSPSPGSVLFELAKVIVIKIIS*
JGI24700J35501_105260152	3300002508	Termite Gut	MHNRVALKRILKFTLKQLQHVSAQSPSSGSVLFEFAKVTITKIIS*
JGI24700J35501_105688751	3300002508	Termite Gut	FKRILKFTLKQLLHVSVQSPSSGSVLFELAKVTAVKIVHYNISVCG*
JGI24700J35501_105852761	3300002508	Termite Gut	MHNRVALKEYYNTLKQLLHVSVQSPSSGSVLFELAKVIVIKII
JGI24700J35501_106380111	3300002508	Termite Gut	CFKRILKFTLKQLLHVSVQSPSSGSVLFELAKDIVIKIIS*
JGI24700J35501_108059151	3300002508	Termite Gut	LIKRILKFALKQLLHVSVQSSSSGSVLFELAKVIVIKIIS
JGI24700J35501_108195246	3300002508	Termite Gut	FKRILKFTLKQLLHVSVQSPATDSVLFDLAKVIVIKIIS*
JGI24700J35501_109158008	3300002508	Termite Gut	FKRILKFTLKQLLHVLVQSPSSGSILFELAKVTVIKIIS*
Ga0099364_101053541	3300006226	Termite Gut	YFKRILKFTLKQLLNVSVQSPSSGSVFFELAKVTVIKIIS*
Ga0099364_101867302	3300006226	Termite Gut	MHKRIAVKRILKFTLKQLLHVLVKSPSSGSAFELAKFIVVKIIN*
Ga0099364_102557664	3300006226	Termite Gut	FKRILKFTLKQLLLVSVQSPSSGNALFEFAKVIIIKIIS*
Ga0099364_104014571	3300006226	Termite Gut	MHNKVALKVLKFTLKQLLHVSVQSPSSGSVLFELAKVIVIKV
Ga0099364_104186974	3300006226	Termite Gut	LKFTLKQLLHVSVQSSKSLSVLFDLAKFTVVKIIIDN*
Ga0099364_104830132	3300006226	Termite Gut	FKRILKFTLKQLLHVSVQSPSLGSVLFELAKVIVIKIIS*
Ga0099364_105411242	3300006226	Termite Gut	FKRILKFTLKQLLHVSVQSPSPGSVLFELAKVIVVKIIC*
Ga0099364_106240894	3300006226	Termite Gut	MHNRVALKRILKFTLKQLLHVSVQSPSSGSVLFELAKV
Ga0099364_107753731	3300006226	Termite Gut	MLKFTLKQLLHVSVQSPSSGSALFELAKVIVVKIIC*
Ga0099364_107860111	3300006226	Termite Gut	LKFTLKQLLQVSVQSLSSGSILFELAEVIVIKIIS*
Ga0123357_100633665	3300009784	Termite Gut	MEEGNFHFFTLKQLQRVSVQPPSGSALFELAKVTVVKIMN*
Ga0131853_101575791	3300010162	Termite Gut	TVLNFTLKQLLHVSVQSPSSGTILFEHAKVTVVKIIN*
Ga0209531_100467531	3300027558	Termite Gut	LKFTLKELLHVLVQSPSSGSIFFELAKVIIIKIIS
Ga0209531_102265391	3300027558	Termite Gut	FKRILKFRLKQLLHVSVQSPSSGSVLFELAKVIFIKIII
Ga0209628_101678332	3300027891	Termite Gut	ILKFTSKQLLHVSVQSPSSGSVLFELAKVIVIKIIS
Ga0209628_102398641	3300027891	Termite Gut	KRILKFTLKQLLHVSVQSPSSGSVLFELAKVIVIKIIS
Ga0209628_102567431	3300027891	Termite Gut	CFRRILKFTLKHLLHVSVQSPSSGSVLFELAKVIVIKIIS
Ga0209628_102866301	3300027891	Termite Gut	SCFKIILKFTLKQLLHVSVQSPSSGSVLFELAKVIVIKIIS
Ga0209628_103999763	3300027891	Termite Gut	KKILKFSLKQLLHVSVQSPSSGSVLFELAKVIVIKIIS
Ga0209628_104359011	3300027891	Termite Gut	FKRILKFTLKQLLHVSVQLPSSGSVLSELAKVIVIKIIS
Ga0209628_104682571	3300027891	Termite Gut	LGVKWLKQLLHVSVQSPSSGSVLFELAKVIVIKIIS
Ga0209628_105346451	3300027891	Termite Gut	MLKFALKQLLHVSVQSPSSGRVLFELAEVIVVKIIS
Ga0209628_105821641	3300027891	Termite Gut	MLKFTLKQLLHVSVQSPSSGSALFELAKVIVVKIMRSL
Ga0209628_105907732	3300027891	Termite Gut	MLKFTLKQLLHVSVQSPSAGSVLFELAKVIVIKII
Ga0209628_107620011	3300027891	Termite Gut	FKRILKFTLKQILHVSVQSPSSGSVFFELAKVIIIKIIS
Ga0209628_110168611	3300027891	Termite Gut	CFKRILKFTLKQLLHVSVQSPSSGSVLFELATDIVIKIIS
Ga0209628_110978291	3300027891	Termite Gut	MLKFTLKQLLHVSVQSPSSGSVLFELAKVIVIKII
Ga0209628_112032411	3300027891	Termite Gut	RILKFTLKQLLHVSVQSPSSGSILFELAKVIVIKIIS
Ga0209737_103660171	3300027904	Termite Gut	LKFTLKQLLHVSVQSPSSGSVLFELAKIIVIKTIS
Ga0209737_103792511	3300027904	Termite Gut	CFKRILKFTLKQLLHVSVQSPSSGSVLFELAKVIVIKIVS
Ga0209737_104399481	3300027904	Termite Gut	ILKYTSKQLLHVSVQSPSSGSVLFGLAKVTVIKISS
Ga0209737_105986711	3300027904	Termite Gut	RILKFTLKQLLHVSVQSPSSGSVLFELAKVIVIKIIS
Ga0209737_106491331	3300027904	Termite Gut	MHNRITFKRILKFTLKQLLHVSVQSPSSGSVLFELAKVMVIKIIS
Ga0209737_107266322	3300027904	Termite Gut	ILKFTLKQLLHVSVQSPSSGRVLFELAKVIVIKIIS
Ga0209737_108501101	3300027904	Termite Gut	LKFTLKQLLHVSVQSPSSGSVLFELAKVVVIKIIS
Ga0209737_112339541	3300027904	Termite Gut	ILKFALKQLLHVSVPSPSSGSVLFELIKVIVIKIIS
Ga0209737_117121401	3300027904	Termite Gut	LKFTLKQLLLVSVQSPSSGSVLFELAKVIVIKIIS
Ga0209627_10169341	3300027960	Termite Gut	KRILKFTLKQLLHVSVQSPSSGSALFELAKVIVVKMIN
Ga0209627_10325821	3300027960	Termite Gut	CFESILKFTLKQLLHVSVQSPSSGSVLFEFAKVIVIKIIS
Ga0209627_12539411	3300027960	Termite Gut	KRILKFTLKQLLHVSVQSPSSGSVLFELTKVIVIKIIS
Ga0209627_13166882	3300027960	Termite Gut	MLKFTLKQLLHVSVQSPSSGNLLFELAKVLVVKII
Ga0209629_103527281	3300027984	Termite Gut	MVKRILKFTLKQLLHVSVQSPLSGSVLFELAKVIVIKII
Ga0209629_105742211	3300027984	Termite Gut	KKILKFTLKRLLHVSVQSPSSESVLFEFAKVIVIKIIS
Ga0209629_108855821	3300027984	Termite Gut	FKRILKFTLKQLLHVSVQSPSSGSLLFELAKVIVIKIIS