NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F090559

Metagenome Family F090559

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F090559
Family Type Metagenome
Number of Sequences 108
Average Sequence Length 44 residues
Representative Sequence MPETSTVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKMKLMK
Number of Associated Samples 35
Number of Associated Scaffolds 108

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 77.67 %
% of genes near scaffold ends (potentially truncated) 61.11 %
% of genes from short scaffolds (< 2000 bps) 68.52 %
Associated GOLD sequencing projects 27
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Eukaryota (82.407 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut
(98.148 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
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IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.
1JGI20172J14457_100776412
2JGI20163J15578_100137918
3JGI20163J15578_100159036
4JGI20163J15578_104521102
5JGI20163J15578_105398492
6JGI20163J15578_105407803
7JGI20163J15578_105443372
8JGI20165J26630_100286511
9JGI20165J26630_100741104
10JGI20165J26630_107449231
11JGI20164J26629_102185951
12JGI20164J26629_106068911
13JGI20166J26741_105356275
14JGI20166J26741_114911332
15JGI20166J26741_115407871
16JGI20166J26741_115546354
17JGI20166J26741_118970761
18JGI20163J26743_109516291
19JGI20163J26743_110350171
20JGI20169J29049_108808992
21JGI20169J29049_111804611
22JGI24695J34938_101967621
23JGI24695J34938_105882961
24JGI24702J35022_106211692
25JGI24703J35330_110493261
26JGI24703J35330_112047621
27JGI24703J35330_113417093
28JGI24703J35330_114149632
29JGI24703J35330_115584521
30JGI24705J35276_114004882
31JGI24697J35500_107923481
32JGI24699J35502_104860312
33JGI24699J35502_105459181
34JGI24699J35502_111268894
35JGI24694J35173_102035891
36JGI24694J35173_102866941
37JGI24694J35173_104492061
38JGI24694J35173_108630122
39JGI24696J40584_123152651
40JGI24696J40584_124579052
41Ga0072940_13619732
42Ga0082212_103051581
43Ga0099364_101854673
44Ga0123357_100436961
45Ga0123357_100465205
46Ga0123357_100700523
47Ga0123357_100894381
48Ga0123357_101420431
49Ga0123357_101452494
50Ga0123357_103154072
51Ga0123357_104929972
52Ga0123357_108819211
53Ga0123355_101410211
54Ga0123355_102014484
55Ga0123355_103447621
56Ga0123355_112009862
57Ga0123355_115665541
58Ga0123356_122847662
59Ga0123356_124418551
60Ga0123356_126562902
61Ga0123356_126685982
62Ga0131853_1000123612
63Ga0131853_100137352
64Ga0131853_100334466
65Ga0131853_100386365
66Ga0131853_100566753
67Ga0131853_100671347
68Ga0131853_100967896
69Ga0131853_101139051
70Ga0131853_101432163
71Ga0131853_102245443
72Ga0131853_102755471
73Ga0131853_103887501
74Ga0131853_108629101
75Ga0123353_103003731
76Ga0123353_104244541
77Ga0123353_104948372
78Ga0123353_106861062
79Ga0123353_114325802
80Ga0123353_134150771
81Ga0136643_100537547
82Ga0123354_100573267
83Ga0209424_10253633
84Ga0209424_12640371
85Ga0209424_13028851
86Ga0209531_100607931
87Ga0209531_101180042
88Ga0209531_102601182
89Ga0209755_100577845
90Ga0209755_101793381
91Ga0209755_102057402
92Ga0209755_102091422
93Ga0209755_105152171
94Ga0209755_108315341
95Ga0209628_101796571
96Ga0209628_102686583
97Ga0209628_105324871
98Ga0209628_105724812
99Ga0209737_112838281
100Ga0209627_11700773
101Ga0209627_11948202
102Ga0209627_13276851
103Ga0209738_101322972
104Ga0209629_103578831
105Ga0209629_106644032
106Ga0268261_105411561
107Ga0268261_106763381
108Ga0268262_105767521
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 36.62%    β-sheet: 0.00%    Coil/Unstructured: 63.38%
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Variant

510152025303540MPETSTVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKMKLMKSequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered Regions
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains




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Phylogeny

NCBI Taxonomy

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All Organisms
Unclassified
83.3%16.7%
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Associated Scaffolds





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Environmental Properties

Associated Habitat Types

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Visualization
Termite Gut
Termite Gut
Termite Gut
98.1%
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Associated Samples


Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20172J14457_1007764123300001343Termite GutMPETNIIKRIHKWKPFTGRPAGKPKSRWEDYVRNDLKKMKVM
JGI20163J15578_1001379183300001544Termite GutMPETSIVKKIYTWKPFTRRPVGMPKSRWEDDVRNDLKKMKLIKWAGQV*
JGI20163J15578_1001590363300001544Termite GutMPETNTVKKTHKWKPFTGRPVGTPKSRWEDDVRNDLKKTKPIKWTEQVQDR
JGI20163J15578_1045211023300001544Termite GutMPETTIVKKIYKWKAFTGRPVGRPKSRWEDDVRNGL*
JGI20163J15578_1053984923300001544Termite GutMPGTSIVKKINGNHSQEEVGRPKSRWEDDVRNDLKKMKLIKWAGQVQDRLKW
JGI20163J15578_1054078033300001544Termite GutMHETSIVKKTHKWKPFTRRPVGRPKSRWEDDVRNDLKKMKLIKWTEQV
JGI20163J15578_1054433723300001544Termite GutMPETSIVKKIHKWKPFTGRPVGRSKSRWEDDVRNDLKEMKLM
JGI20165J26630_1002865113300002125Termite GutMPETSIVKKIHKWRPFTGRPVGRPKSRWEDDDKNDLKKMKLIKRTEQFQDRLK*
JGI20165J26630_1007411043300002125Termite GutMPETSIVKKIYTWKPFTRRPVGMPKSRWEDDVRNDLKKMKLIKW
JGI20165J26630_1074492313300002125Termite GutMPETSIIKKIHNWKPFTGRPVGRPKSRWEDDVRNDL
JGI20164J26629_1021859513300002127Termite GutMHETSIVKKTHKWKPFTRRPVGRPKSRWEDDVRNDLKKMKLIKW
JGI20164J26629_1060689113300002127Termite GutMPETSIVKKIHKWRPFTGRPVGRPKSRWEDDKNDLKKMKLIKR
JGI20166J26741_1053562753300002175Termite GutMPETNTVKKTHKWKPFTGRPVGTPKSRWEDDVRNDLKKTKPIKWTEQVQDRLRWKG
JGI20166J26741_1149113323300002175Termite GutIVKKIHKWKPFTGRPVGRPKSRWEDDVRNDLKKMKLIKWS*
JGI20166J26741_1154078713300002175Termite GutMPETSIVKKIHKWKPFTGRPVGRPKSRWEDDVRNDLKKMKLIKW
JGI20166J26741_1155463543300002175Termite GutMPETSIVKKIHKRKPFTGRPVGRASSRWEDDVRNDLKTMKLIK*
JGI20166J26741_1189707613300002175Termite GutMPETSTVKKKHKWKPFTGRPVGRPKFRWEDDVRNDLKKMKLIKRTEQV
JGI20163J26743_1095162913300002185Termite GutSIVKKIHKWKPFTGRPVGRPKSRWEDDVRNDLKKMKLIKWS*
JGI20163J26743_1103501713300002185Termite GutMHETSIVKKIHKWKPLTGRPVGRPKSRWEDDVRNDMKEM
JGI20169J29049_1088089923300002238Termite GutMPETGIVKRMYKWKPFTGRPAGRPKSRWEDDVRNDLKKMKLM
JGI20169J29049_1118046113300002238Termite GutMPETSIVKRIHKWKPFTGRPARKPKSRWEYDVRNGLKKVKLMK*
JGI24695J34938_1019676213300002450Termite GutMPENSRVKGINKRKPFTGRPAGKPKSRWEVDVWNDLKKI*
JGI24695J34938_1058829613300002450Termite GutKRIHKWKPFTGRPAERPKSRWEDDVRNVVKKMKPVNWTERTGPP*
JGI24702J35022_1062116923300002462Termite GutMPETSTVKKIYKWKPFTRRPVGRPKSRWEDVVRNDLKKIKLIKWAGQV*
JGI24703J35330_1104932613300002501Termite GutMPETSIVKRIYRWKPFRGRPAGKPKSCWEDDVKNDLKKMTLMKWTEQV*
JGI24703J35330_1120476213300002501Termite GutMPETSIVKRIHKWKPLTGRPAGMPKSRWEDDFRNDLKKMKLIKWAEQVQDRLKW
JGI24703J35330_1134170933300002501Termite GutMPETSIVKRIYKWKPFTSRPAGRPKSRWQDDVRNDLKKTKL
JGI24703J35330_1141496323300002501Termite GutMAETSIVKRIHKWNPSTGRPIGRPKSRWEDDVRNDLKKMKLMKWTEQVQDR
JGI24703J35330_1155845213300002501Termite GutMPETSIVKRIHKWKPFTGRPAGMPRSRWEDDVRNDLKKMKFMKWTEQVQDHLK*
JGI24705J35276_1140048823300002504Termite GutMPETSIVKRIHKWKLFTGRPVGGPKSRWEDDVRNDLKKMKFIKWAEQV
JGI24697J35500_1079234813300002507Termite GutETGTVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKTKLMK*
JGI24699J35502_1048603123300002509Termite GutIHKWKPFTGRPPGRPKCQWEVDLRNDLKKMKLMKWAEQV*
JGI24699J35502_1054591813300002509Termite GutRMPETGTVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKTKLMK*
JGI24699J35502_1112688943300002509Termite GutMPETSIVKRMHKWKLFTGRPAGRPKSRWEDDVRNGLKKMKFMKWAEQV*
JGI24694J35173_1020358913300002552Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRWNDDVRNYLKKMKLVK*
JGI24694J35173_1028669413300002552Termite GutMPETSIVKRKHKWKPFTGRPAGWDDVRDDLKKMKLVKWAEQVQDHSK
JGI24694J35173_1044920613300002552Termite GutLDTQIVPETSIVKRIHKWKPFTGRPAGRPISRWDDDVRNDLKKL*
JGI24694J35173_1086301223300002552Termite GutVKIIHKWKPFTGRPAGRPRSGWDDDVRNGLEKMELVKWAEQ
JGI24696J40584_1231526513300002834Termite GutMPETSIVKRIHKWKPFTGRLAGRPKSRWDDDVRSDLKKMSL*
JGI24696J40584_1245790523300002834Termite GutMHKTSTVKRIHKWKPFTGRPAGSPKSRREGDVRNDLKKMKFMKWAEQVQ
Ga0072940_136197323300005200Termite GutMSESSIVKEIYKWKPFTIRPVARPKSRWEDDVKNNLKKMKLIK*
Ga0082212_1030515813300006045Termite GutMPETSIVKSIHKWEPFPGRPAGRPRSRWVGDVRNDLKKMKLMKW
Ga0099364_1018546733300006226Termite GutMPETGTVKKIYIWKPFTRRPVGRPKSRWEDDVRNDLKKMKLIK*
Ga0123357_1004369613300009784Termite GutMPETSIVKRIHKLKPFIGRPAGRPKSRWDDDVRNDLKKMKLVKWAEQIQNRSK*
Ga0123357_1004652053300009784Termite GutMPESSIVKRIHKWKPFSGRPAGRPKSRWDDDVRNDLKKMKLVKWAEQV*
Ga0123357_1007005233300009784Termite GutMPETSVVKRIHKRKPFTGRPSGRLKSRWDDDVRNDLKKMNLVK*
Ga0123357_1008943813300009784Termite GutMPETGIVKRTHKWKPLTGRPAGRPKSRWEDDVRNDLKKMKLMKWAEQIL
Ga0123357_1014204313300009784Termite GutMPETSIVKRIHKWKPFTGRPAGRRKSRWEDNVRNDLKMKLMKWEE*
Ga0123357_1014524943300009784Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKVKLT
Ga0123357_1031540723300009784Termite GutMPETSTVKRIHKWKPFTGRPAGRPKSRWDDDVRNDLKKTKLVKWAELQDRL
Ga0123357_1049299723300009784Termite GutMPETSTVKRINEWKPFTGIPAGRVKSGWEDDVRNGLEKMRLEK*
Ga0123357_1088192113300009784Termite GutMPENIIVKRIHKWKPLTGRPAGRPKSRWEDDVRNDLKKMKLM*
Ga0123355_1014102113300009826Termite GutMPETSIVKRIHKWKPFTGRPAGRRKSRWEDNVRNDLKKMKLMRRGE*
Ga0123355_1020144843300009826Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKVKLTEW
Ga0123355_1034476213300009826Termite GutMPETSIAKRIHKWKPFTGRPAGRPKSRWDDDVRNDLKKMKLVKWAE*
Ga0123355_1120098623300009826Termite GutMPKTSIVKRIHIWKPFTGRPAGGPKSRWDNDVRNDLKKMKLVK*
Ga0123355_1156655413300009826Termite GutMPETSKVKRIHKRKPFIGRPAGRPKSRWEDDVRNDLKKMKLMKWAE
Ga0123356_1228476623300010049Termite GutMPETSTVKRIHKWKPFTGRPAGRPQSRWEDDVRNDLKKMKLMKWAEQVQDRLKW
Ga0123356_1244185513300010049Termite GutMPETSIVKRIYKWKPFTGRPAGRPKSRRDDVRNHLKKMKLMKWAEKVQDR
Ga0123356_1265629023300010049Termite GutKRIHKWKPFTGRPAGISKSRWEDDVRNDLKKMKLMK*
Ga0123356_1266859823300010049Termite GutMPETTTVKRIHKWKPFTGRPAGRPKSRWDDDVRNDLKK
Ga0131853_10001236123300010162Termite GutMPETSITKRMHKWKPFTGRPAARPKSRWEVDVRNGLKKMKLMKWAEQV*
Ga0131853_1001373523300010162Termite GutMPKTIIVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKM*
Ga0131853_1003344663300010162Termite GutMPETSTVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKMKLMK
Ga0131853_1003863653300010162Termite GutVKRIHKWKPFTGGPAGRPKSKWDDDVRNDLKKMKLVK*
Ga0131853_1005667533300010162Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRWEDDVKNDLRKMKL*
Ga0131853_1006713473300010162Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRWDDDVRNDLKKM
Ga0131853_1009678963300010162Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRCDDVVRKDLKKMKLVKWAE*
Ga0131853_1011390513300010162Termite GutMPKTSTVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKMKLMK
Ga0131853_1014321633300010162Termite GutMPETSIAKGIHKWKPFTGRPAGRPKSRWEDDVRNDLKKMELVK*
Ga0131853_1022454433300010162Termite GutMPETGIVKRIHKWKPFTGRPAGRPKSRWDDDVRNDLKKMKLVKWA
Ga0131853_1027554713300010162Termite GutMPETSIVERIHKWKPFTGRPAGRPKSRWEDDVRNNLKKMKLMKWE*
Ga0131853_1038875013300010162Termite GutTSTVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKMKLMK*
Ga0131853_1086291013300010162Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKMKLVKWAEQV
Ga0123353_1030037313300010167Termite GutTDRMPETSVVKRIHKWKPFTGRPAGRPKSRWDDDDQE*
Ga0123353_1042445413300010167Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRWEDDVRNDVKKM
Ga0123353_1049483723300010167Termite GutMPETSTVKRIHKWKPFTGRPAGRPKSRWEDDVRNGLKKMKLTKWAKQVQ
Ga0123353_1068610623300010167Termite GutVKRIHKWKPFTGGPAGRPKSKWDDDVRNDLKKMKLV
Ga0123353_1143258023300010167Termite GutMPETGIVKRIHKWKPFTGRPAGRPKSRWDDDVRNDLKKMKLVKWAE
Ga0123353_1341507713300010167Termite GutMPKTIIVKRIHKWKPFTGRPAGRPKSRWEDDVRNDLKKM
Ga0136643_1005375473300010369Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRWDDDVRNDLKKMKLVKWAE
Ga0123354_1005732673300010882Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRWDDDVRNDLKKMKLVKWA
Ga0209424_102536333300027539Termite GutIVKRRHKWKPFTGRPGVKFKSRLEVDFKNDPMKMKLMKWAEQIQGRLK
Ga0209424_126403713300027539Termite GutLNIAKKMYKWKPFTSRPVGRPKSRWEDDVRNGLKKMKLIK
Ga0209424_130288513300027539Termite GutMPETSIVKRIHKWKPFTGRPAGKPKSRWEDDVRNDLKTMKLMKRAEQVQDRLK
Ga0209531_1006079313300027558Termite GutMPETSIVKKIHKWKPFTGRPVGRPKSRWEDDVRNDLKKMKLIK
Ga0209531_1011800423300027558Termite GutMPETSIVKKIYTWKPFTRRPVGMPKSRWEDDVRNDLKKMKLIKWAGQV
Ga0209531_1026011823300027558Termite GutMPETSIVKKIHKWKPFTRRPIGRSKSRWEDDVRNDLKKMKLIKWTEQVQDR
Ga0209755_1005778453300027864Termite GutMPETSIVKRIHKWKPFTGRPAGRPISRWDDDVTNDLKKL
Ga0209755_1017933813300027864Termite GutMPENSRVKGINKRKPFTGRPAGKPKSRWEVDVWNDLKKI
Ga0209755_1020574023300027864Termite GutMPETSIVKRIDKWKPFAGRPAGRPKSRWEDDVRNGL
Ga0209755_1020914223300027864Termite GutMPETSIVKRIHKWKPFTGRPAGRPKSRWNDDVRNYLKKMKLVK
Ga0209755_1051521713300027864Termite GutMPETSIVRRIHKWKPFTGRPAGRPKSRWEDDVRIDLKKMKR
Ga0209755_1083153413300027864Termite GutVKIIHKWKPFTGRPAGRPRSGWDDDVRNGLEKMELVKWAEQVHGRSK
Ga0209628_1017965713300027891Termite GutMPETNTVKKTHKWKPFTGRPVGTPKSRWEDDVRNDLKKTKPIKWTEQVQDRLRWK
Ga0209628_1026865833300027891Termite GutMPETSIVKIIYKWKPFTRRQVGRPMSLLEDDVRNDLKKMKLIKWAGQVQDRLK
Ga0209628_1053248713300027891Termite GutMPETSIVKKIHKWKPFTGRPVGRPKSRWEDDFRNDLKKMKLIKWTS
Ga0209628_1057248123300027891Termite GutMPETSIVKKIHKWKPFTGRPAGRPKSRWEDNVRNDLKKMKLIKW
Ga0209737_1128382813300027904Termite GutMPETSIVKKIHKWKPFTGRPVGRPKSRWEDDVRNDLKKMKLI
Ga0209627_117007733300027960Termite GutMPETSIVKKIHKWKPFTGRPVGRPKSRWEDDVRNDL
Ga0209627_119482023300027960Termite GutMPETNVVKKINKWKPFTGRPVGRTKSRWEDDVRNDLKKMKLIKWTEQVQVRL
Ga0209627_132768513300027960Termite GutMPETTIVKKIYKWKAFTGRPVGRPKSRWEDDVRNGL
Ga0209738_1013229723300027966Termite GutMPETGIVKRMYKWKPFTGRPAGRPKSRWEDDVRNDLKKMKLMK
Ga0209629_1035788313300027984Termite GutMPETSIVKKIHKWKPFTGRPVGRPKSRWEDDVRNDLKKMKLIKWTEQV
Ga0209629_1066440323300027984Termite GutMSETSIVKKIHKWKPFTGRPVGRAKSRWEDDVRNDLKKMKLIKWTEQVQMERNF
Ga0268261_1054115613300028325Termite GutMLETSIVKRIHKWKPFTGRPAGRPKSRWEDDVRND
Ga0268261_1067633813300028325Termite GutMPESSIVKRIHKWKPFTGRPAGRPKSGWEDDVRNDLKKMKLMKWAE
Ga0268262_1057675213300028327Termite GutMPETGIVKRMYKWKPFTGRPAGRPKSRWEDDVRNDLKKMKLMKWAKQVQDRLK


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